mRNA_Ecto-sp9_F_contig10658.591.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp9_F_contig10658.591.1
Unique Name	mRNA_Ecto-sp9_F_contig10658.591.1
Type	mRNA
Organism	Ectocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)

Homology

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BLAST of mRNA_Ecto-sp9_F_contig10658.591.1 vs.
Match: Myosin (motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1W6_9PHAE)

HSP 1 Score: 419 bits (1078), Expect = 7.090e-138
Identity = 210/217 (96.77%), Postives = 213/217 (98.16%), Query Frame = 1

Query:    1 VFCRLFEWLVERINRSTASSAPDADGPGGAGAGAKTRHAGEALAPGGTVALLDIFGFESFKVNRFEQLCINYANEKLQQKFTQDVFKNVQAEYEEEGIPWSHVDFSDNAEVLGLVESRMGIIAVLNEECVRPRGGDNSFVSKLATLHADHSAFARAKLAGPFEFSVRHYAGEVLYHAEGFLDKNRDSVGEACRDLLAKSSVPLIAKVFAPDPGSAEG 651
            ++  LFEWLVERINRSTASSAPDA+GPGGAG GAKTRHAGEALAPGGTVALLDIFGFESFKVNRFEQLCINYANEKLQQKFTQDVFKNVQAEYEEEGIPWSHVDFSDNAEVLGLVESRMGIIAVLNEECVRPRGGDNSFVSKLATLHADHSAFARAKLAGPFEFSVRHYAGEVLYHAEGFLDKNRDSVGEACRDLL KSSVPLIAKVFAPDPGSAEG
Sbjct:  420 IYGGLFEWLVERINRSTASSAPDANGPGGAGPGAKTRHAGEALAPGGTVALLDIFGFESFKVNRFEQLCINYANEKLQQKFTQDVFKNVQAEYEEEGIPWSHVDFSDNAEVLGLVESRMGIIAVLNEECVRPRGGDNSFVSKLATLHADHSAFARAKLAGPFEFSVRHYAGEVLYHAEGFLDKNRDSVGEACRDLLTKSSVPLIAKVFAPDPGSAEG 636

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BLAST of mRNA_Ecto-sp9_F_contig10658.591.1 vs.
Match: Myosin (motor domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHM3_ECTSI)

HSP 1 Score: 412 bits (1060), Expect = 1.880e-132
Identity = 207/217 (95.39%), Postives = 210/217 (96.77%), Query Frame = 1

Query:    1 VFCRLFEWLVERINRSTASSAPDADGPGGAGAGAKTRHAGEALAPGGTVALLDIFGFESFKVNRFEQLCINYANEKLQQKFTQDVFKNVQAEYEEEGIPWSHVDFSDNAEVLGLVESRMGIIAVLNEECVRPRGGDNSFVSKLATLHADHSAFARAKLAGPFEFSVRHYAGEVLYHAEGFLDKNRDSVGEACRDLLAKSSVPLIAKVFAPDPGSAEG 651
            ++  LFEWLVERINRSTASSAPDADGPGGAGAGAKTRHAGEALAPGGTVALLDIFGFESFKVNRFEQLCINYANEKLQQKFTQDVFKNVQAEYEEEGIPWSHVDFSDNAEVLGLVESRMGIIAVLNEECVRPRGGDNSFVSKLATLHADHSAFARAKLAGPFEFSV HY GE LYHAEGFLDKNRDS+GE CRDLLAKS VPLIAKVFAPDPGSAEG
Sbjct:  465 IYGGLFEWLVERINRSTASSAPDADGPGGAGAGAKTRHAGEALAPGGTVALLDIFGFESFKVNRFEQLCINYANEKLQQKFTQDVFKNVQAEYEEEGIPWSHVDFSDNAEVLGLVESRMGIIAVLNEECVRPRGGDNSFVSKLATLHADHSAFARAKLAGPFEFSVGHYPGEFLYHAEGFLDKNRDSLGEPCRDLLAKSWVPLIAKVFAPDPGSAEG 681

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BLAST of mRNA_Ecto-sp9_F_contig10658.591.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TR97_9STRA)

HSP 1 Score: 229 bits (584), Expect = 7.900e-70
Identity = 123/210 (58.57%), Postives = 144/210 (68.57%), Query Frame = 1

Query:    1 VFCRLFEWLVERINRSTASSAPDADGPGGAGAGAKTRHAGEALAPGGTVALLDIFGFESFKVNRFEQLCINYANEKLQQKFTQDVFKNVQAEYEEEGIPWSHVDFSDNAEVLGLVESRMGIIAVLNEECVRPRGGDNSFVSKLATLHADHSAFARAKLAGPFEFSVRHYAGEVLYHAEGFLDKNRDSVGEACRDLLAKSSVPLIAKVFAP 630
            ++ RLF+ +V RIN STA+S   A+        A  R         GT++LLDIFGFESF VNRFEQLCINYANEKLQQKFTQDVFK VQ EYEEEGI WS VDF DNA  L L+E+RMGII+VLNEECVRPRG D + VSKLA+LH DH +F +        F VRHYAG V Y  +G LDKNRD++ E    +   S V LIAK++ P
Sbjct:   74 LYARLFDEVVRRINGSTAASEQPAE--------ADERR--------GTISLLDIFGFESFTVNRFEQLCINYANEKLQQKFTQDVFKTVQTEYEEEGIEWSFVDFVDNASTLALIEARMGIISVLNEECVRPRGSDGALVSKLASLHMDHESFDKPAKLRDTGFIVRHYAGAVTYMVDGILDKNRDALPEQLGVICQHSKVALIAKLYEP 267

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BLAST of mRNA_Ecto-sp9_F_contig10658.591.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1VYN9_ALECA)

HSP 1 Score: 208 bits (529), Expect = 3.900e-63
Identity = 110/211 (52.13%), Postives = 142/211 (67.30%), Query Frame = 1

Query:    1 VFCRLFEWLVERINRSTASSAPDADGPGGAGAGAKTRHAGEALAPGGTVALLDIFGFESFKVNRFEQLCINYANEKLQQKFTQDVFKNVQAEYEEEGIPWSHVDFSDNAEVLGLVESRMGIIAVLNEECVRPRGGDNSFVSKLATLHADHSAFARAKLAGPFE--FSVRHYAGEVLYHAEGFLDKNRDSVGEACRDLLAKSSVPLIAKVFA 627
            ++ R+F+WLV RI    A+SAP A          ++ H          V LLDIFGFESF +NRF Q CINYANEKLQQKFT DVFK VQ EY +EGIPW  ++F DNA +L LVES++GIIA+LNEECVRP+G D +FVSKL+T+H    AF+  KL    E  F+++HYAG VLY A G+L++N+D++ +    L+  S  PLI  +FA
Sbjct:   39 LYARVFDWLVGRI--CAATSAPSA----------QSNH---------FVGLLDIFGFESFAINRFAQFCINYANEKLQQKFTLDVFKAVQQEYSDEGIPWERIEFKDNAPLLALVESKLGIIAMLNEECVRPKGNDENFVSKLSTVHKADPAFSTPKLGAHREVQFTIKHYAGPVLYTASGWLERNKDTISDDVVALMQSSKNPLIRDLFA 228

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BLAST of mRNA_Ecto-sp9_F_contig10658.591.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WAC4_9STRA)

HSP 1 Score: 212 bits (539), Expect = 6.210e-60
Identity = 110/209 (52.63%), Postives = 138/209 (66.03%), Query Frame = 1

Query:    1 VFCRLFEWLVERINRSTASSAPDADGPGGAGAGAKTRHAGEALAPGGTVALLDIFGFESFKVNRFEQLCINYANEKLQQKFTQDVFKNVQAEYEEEGIPWSHVDFSDNAEVLGLVESRMGIIAVLNEECVRPRGGDNSFVSKLATLHADHSAFARAKLAGPFEFSVRHYAGEVLYHAEGFLDKNRDSVGEACRDLLAKSSVPLIAKVFA 627
            ++ R+F++LV RIN ST+++A                H         T+ALLDIFGFE FKVN FEQLCINYANEKLQQKFT DVFK+VQ EY  E IPW  + F DN+E L L+E+RMG+I+VL EEC RP+G D SFVSKL TLH  H  F++ KL    +F++ HYAG V Y   GFL+KN+D +     + L  +S PLIAK+FA
Sbjct:  263 LYARVFDFLVHRINESTSAAASSV-------------HR--------TIALLDIFGFEFFKVNSFEQLCINYANEKLQQKFTHDVFKSVQEEYTRECIPWESIAFKDNSETLALIEARMGVISVLTEECRRPKGSDESFVSKLGTLHGKHPDFSQPKLHAKTQFTIHHYAGAVPYTVTGFLEKNKDHLPADLVETLGAASNPLIAKLFA 450

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BLAST of mRNA_Ecto-sp9_F_contig10658.591.1 vs.
Match: Myo5a (protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A812ZCM6_9DINO)

HSP 1 Score: 211 bits (537), Expect = 2.120e-59
Identity = 107/210 (50.95%), Postives = 142/210 (67.62%), Query Frame = 1

Query:    1 VFCRLFEWLVERINRSTASSAPDADGPGGAGAGAKTRHAGEALAPGGTVALLDIFGFESFKVNRFEQLCINYANEKLQQKFTQDVFKNVQAEYEEEGIPWSHVDFSDNAEVLGLVESRMGIIAVLNEECVRPRGGDNSFVSKLATLHADHSAFARAKLAG--PFEFSVRHYAGEVLYHAEGFLDKNRDSVGEACRDLLAKSSVPLIAKVF 624
            ++ R+F+WLVE+I ++T +    A                        V LLDIFGFESF +NRFEQLCINYANEKLQQKFT DVFK VQ EY  EGIPW  ++F DNA +L L+ES++GI+A+LNEECVRP+G + +FVSKL ++H + +AF+  KL      +FS+RHYAGEV+Y AEG+LD+N D+V E   +L+  S   L+A +F
Sbjct:  411 IYARVFDWLVEQICQATGAPPERAIS---------------------FVGLLDIFGFESFAINRFEQLCINYANEKLQQKFTHDVFKAVQQEYTAEGIPWDRIEFKDNAPILALIESKLGIVAMLNEECVRPKGSNENFVSKLLSVHKEDAAFSVPKLGKMRELQFSIRHYAGEVMYTAEGWLDRNNDTVSEDVINLMRGSGNELLASLF 599

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BLAST of mRNA_Ecto-sp9_F_contig10658.591.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4WAU7_9DINO)

HSP 1 Score: 209 bits (532), Expect = 1.020e-58
Identity = 106/210 (50.48%), Postives = 142/210 (67.62%), Query Frame = 1

Query:    1 VFCRLFEWLVERINRSTASSAPDADGPGGAGAGAKTRHAGEALAPGGTVALLDIFGFESFKVNRFEQLCINYANEKLQQKFTQDVFKNVQAEYEEEGIPWSHVDFSDNAEVLGLVESRMGIIAVLNEECVRPRGGDNSFVSKLATLHADHSAFARAKLAGPFE--FSVRHYAGEVLYHAEGFLDKNRDSVGEACRDLLAKSSVPLIAKVF 624
            ++ RLF+WLV RI  +T++S+            A++ H          V LLDIFGFESF +NRFEQ CINYANEKLQQKFT DVFK VQ EY +EGIPW  ++F DNA +L L+E+++GIIA+LNEECVRP+G D +FVSKL+T+H     F+  KL    E  F+++HYAG VLY A G+L++N+D++ E    L+  S  PL+  +F
Sbjct:  423 LYARLFDWLVGRICAATSASS------------AQSSH---------FVGLLDIFGFESFAINRFEQFCINYANEKLQQKFTLDVFKAVQQEYSDEGIPWERIEFKDNAPLLALIEAKLGIIAMLNEECVRPKGADENFVSKLSTVHKADPGFSTPKLGAQREVQFAIKHYAGSVLYTASGWLERNKDTISEDVVTLMQSSENPLVKDLF 611

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BLAST of mRNA_Ecto-sp9_F_contig10658.591.1 vs.
Match: MYO5C (protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812QDA8_9DINO)

HSP 1 Score: 200 bits (509), Expect = 2.150e-58
Identity = 96/162 (59.26%), Postives = 123/162 (75.93%), Query Frame = 1

Query:  145 VALLDIFGFESFKVNRFEQLCINYANEKLQQKFTQDVFKNVQAEYEEEGIPWSHVDFSDNAEVLGLVESRMGIIAVLNEECVRPRGGDNSFVSKLATLHADHSAFARAKLAG--PFEFSVRHYAGEVLYHAEGFLDKNRDSVGEACRDLLAKSSVPLIAKVF 624
            +AL DIFGFESF +NRFEQLCINYANEKLQQKFT DVFK VQ EY  EGIPW  ++F DNA +L L+ES++GI+A+LNEECVRP+G + +FVSKL ++H +  AF+  KL      +F +RHYAGEV+Y AEG+LD+N D+V E   +L+  S   L+A +F
Sbjct:  248 LALSDIFGFESFAINRFEQLCINYANEKLQQKFTHDVFKAVQQEYTAEGIPWDRIEFKDNAPILALIESKLGIVAMLNEECVRPKGSNENFVSKLLSVHKEDGAFSVPKLGKMRELQFCIRHYAGEVMYTAEGWLDRNNDTVSEDVINLMRGSGNELLASLF 409

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BLAST of mRNA_Ecto-sp9_F_contig10658.591.1 vs.
Match: XI-2 (protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812IWM7_SYMPI)

HSP 1 Score: 206 bits (525), Expect = 8.950e-58
Identity = 108/210 (51.43%), Postives = 139/210 (66.19%), Query Frame = 1

Query:    1 VFCRLFEWLVERINRSTASSAPDADGPGGAGAGAKTRHAGEALAPGGTVALLDIFGFESFKVNRFEQLCINYANEKLQQKFTQDVFKNVQAEYEEEGIPWSHVDFSDNAEVLGLVESRMGIIAVLNEECVRPRGGDNSFVSKLATLHADHSAFARAKLAG--PFEFSVRHYAGEVLYHAEGFLDKNRDSVGEACRDLLAKSSVPLIAKVF 624
            ++ R+F+WLV++I  +T               GA    A         V LLDIFGFESF +NRFEQLCINYANEKLQQKFT DVFK VQ EY  EGIPW  ++F DNA +L LVES++GI+A+LNEECVRP+G + +FVSKL ++H +  AF+  KL      +F +RHYAGEV+Y AEG+LD+N D+V E    L+  S   L+A +F
Sbjct:  424 IYARVFDWLVDQICLAT---------------GAPPERARS------FVGLLDIFGFESFAINRFEQLCINYANEKLQQKFTHDVFKAVQQEYTAEGIPWDRIEFKDNAPILALVESKLGIVAMLNEECVRPKGSNQNFVSKLLSVHKEDPAFSVPKLGKMRELQFCIRHYAGEVMYTAEGWLDRNNDAVSEDVISLMRGSGNELLASLF 612

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BLAST of mRNA_Ecto-sp9_F_contig10658.591.1 vs.
Match: Myosin (motor domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XXB7_AURAN)

HSP 1 Score: 202 bits (513), Expect = 1.040e-56
Identity = 108/217 (49.77%), Postives = 143/217 (65.90%), Query Frame = 1

Query:    1 VFCRLFEWLVERINRSTASSAPDADGPGGAGAGAKTRHAGEALAPGGTVALLDIFGFESFKVNRFEQLCINYANEKLQQKFTQDVFKNVQAEYEEEGIPWSHVDFSDNAEVLGLVESRMGIIAVLNEECVRPRGGDNSFVSKLATLHA---DHSA----FARAKLAGPFEFSVRHYAGEVLYHAEGFLDKNRDSVGEACRDLLAKSSVPLIAKVFAP 630
            ++ R F+W+V+RIN ST+SS   +       +G         +     V LLDIFGFESF VNRFEQLCINY NEKLQQKFT D+FK VQ EY++E +PW+HV F DNA VL L++ RMG+I VLNEECVRPRG D  FVSK+ +LH    D S     F  A++    +F+V+HYAG+V Y AE +L++N D++ E    L   ++  L+A++FAP
Sbjct:  442 IYVRAFDWIVKRINASTSSSGETST------SGGDLASLANGVDKVKVVGLLDIFGFESFAVNRFEQLCINYTNEKLQQKFTLDLFKTVQQEYDDERVPWTHVAFPDNAAVLALIDGRMGVIDVLNEECVRPRGSDEGFVSKMKSLHGSATDESGPSARFVAARIRKD-QFTVKHYAGDVTYTAEKWLERNNDALMEDLNLLARHATFKLLAELFAP 651

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp9_F_contig10658.591.1 vs.

BLAST of mRNA_Ecto-sp9_F_contig10658.591.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
Myosin	7.090e-138	96.77	motor domain-containing protein n=1 Tax=Ectocarpus...	[more]
Myosin	1.880e-132	95.39	motor domain-containing protein n=1 Tax=Ectocarpus...	[more]
Hypothetical	7.900e-70	58.57	protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=...	[more]
Hypothetical	3.900e-63	52.13	protein (Fragment) n=1 Tax=Alexandrium catenella T...	[more]
Hypothetical	6.210e-60	52.63	protein n=1 Tax=Rhizochromulina marina TaxID=10348...	[more]
Myo5a	2.120e-59	50.95	protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A8...	[more]
Hypothetical	1.020e-58	50.48	protein (Fragment) n=1 Tax=Alexandrium monilatum T...	[more]
MYO5C	2.150e-58	59.26	protein n=1 Tax=Symbiodinium necroappetens TaxID=1...	[more]
XI-2	8.950e-58	51.43	protein n=1 Tax=Symbiodinium pilosum TaxID=2952 Re...	[more]
Myosin	1.040e-56	49.77	motor domain-containing protein (Fragment) n=1 Tax...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp9_F_contig10658	contig	Ecto-sp9_F_contig10658:178..2067 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	413.3
Seed ortholog evalue	7e-113
Seed eggNOG ortholog	2880.D8LHM3
Preferred name	MYO19
KEGG ko	ko:K10356,ko:K10357,ko:K22366
GOs	GO:0000001,GO:0000003,GO:0000011,GO:0000131,GO:0000132,GO:0000146,GO:0000149,GO:0000166,GO:0000226,GO:0000278,GO:0000281,GO:0000302,GO:0000331,GO:0000902,GO:0000904,GO:0000910,GO:0000912,GO:0000915,GO:0001101,GO:0001558,GO:0001654,GO:0001676,GO:0001726,GO:0001745,GO:0001750,GO:0001751,GO:0001754,GO:0001891,GO:0001931,GO:0001942,GO:0002250,GO:0002252,GO:0002253,GO:0002376,GO:0002429,GO:0002431,GO:0002433,GO:0002443,GO:0002449,GO:0002456,GO:0002460,GO:0002682,GO:0002684,GO:0002757,GO:0002764,GO:0002768,GO:0002790,GO:0003006,GO:0003008,GO:0003014,GO:0003091,GO:0003674,GO:0003774,GO:0003779,GO:0003824,GO:0005102,GO:0005488,GO:0005509,GO:0005515,GO:0005516,GO:0005524,GO:0005543,GO:0005546,GO:0005547,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005768,GO:0005773,GO:0005794,GO:0005826,GO:0005829,GO:0005856,GO:0005882,GO:0005884,GO:0005886,GO:0005902,GO:0005903,GO:0005911,GO:0005929,GO:0005933,GO:0005934,GO:0005935,GO:0005937,GO:0005938,GO:0006082,GO:0006403,GO:0006582,GO:0006629,GO:0006631,GO:0006633,GO:0006725,GO:0006810,GO:0006886,GO:0006887,GO:0006892,GO:0006897,GO:0006904,GO:0006909,GO:0006928,GO:0006935,GO:0006950,GO:0006955,GO:0006970,GO:0006971,GO:0006979,GO:0006996,GO:0007005,GO:0007010,GO:0007015,GO:0007017,GO:0007018,GO:0007029,GO:0007030,GO:0007031,GO:0007033,GO:0007049,GO:0007097,GO:0007107,GO:0007114,GO:0007117,GO:0007118,GO:0007154,GO:0007155,GO:0007163,GO:0007165,GO:0007166,GO:0007267,GO:0007268,GO:0007272,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007291,GO:0007317,GO:0007349,GO:0007399,GO:0007423,GO:0007530,GO:0007531,GO:0007533,GO:0007584,GO:0007600,GO:0007601,GO:0007610,GO:0007626,GO:0008021,GO:0008064,GO:0008088,GO:0008092,GO:0008104,GO:0008144,GO:0008150,GO:0008152,GO:0008289,GO:0008298,GO:0008360,GO:0008361,GO:0008366,GO:0008544,GO:0008610,GO:0009058,GO:0009267,GO:0009306,GO:0009506,GO:0009581,GO:0009582,GO:0009605,GO:0009612,GO:0009628,GO:0009636,GO:0009653,GO:0009719,GO:0009725,GO:0009791,GO:0009826,GO:0009856,GO:0009860,GO:0009887,GO:0009888,GO:0009908,GO:0009914,GO:0009932,GO:0009966,GO:0009987,GO:0009991,GO:0010015,GO:0010026,GO:0010033,GO:0010035,GO:0010053,GO:0010054,GO:0010090,GO:0010091,GO:0010154,GO:0010243,GO:0010256,GO:0010522,GO:0010564,GO:0010639,GO:0010646,GO:0010720,GO:0010769,GO:0010770,GO:0010817,GO:0010821,GO:0010959,GO:0010970,GO:0010975,GO:0010976,GO:0012505,GO:0012506,GO:0014070,GO:0014074,GO:0014910,GO:0014911,GO:0015031,GO:0015629,GO:0015833,GO:0016020,GO:0016028,GO:0016043,GO:0016049,GO:0016050,GO:0016053,GO:0016192,GO:0016197,GO:0016358,GO:0016459,GO:0016460,GO:0016461,GO:0016462,GO:0016477,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017016,GO:0017022,GO:0017075,GO:0017076,GO:0017111,GO:0017137,GO:0017157,GO:0018958,GO:0019438,GO:0019748,GO:0019752,GO:0019867,GO:0019899,GO:0019900,GO:0019901,GO:0019904,GO:0019905,GO:0019953,GO:0019954,GO:0021700,GO:0022008,GO:0022402,GO:0022404,GO:0022405,GO:0022406,GO:0022412,GO:0022413,GO:0022414,GO:0022603,GO:0022604,GO:0022607,GO:0022610,GO:0022622,GO:0022898,GO:0023051,GO:0023052,GO:0023061,GO:0030010,GO:0030027,GO:0030029,GO:0030030,GO:0030031,GO:0030036,GO:0030038,GO:0030046,GO:0030048,GO:0030050,GO:0030054,GO:0030072,GO:0030073,GO:0030104,GO:0030133,GO:0030139,GO:0030141,GO:0030154,GO:0030175,GO:0030182,GO:0030307,GO:0030318,GO:0030334,GO:0030335,GO:0030424,GO:0030425,GO:0030426,GO:0030427,GO:0030479,GO:0030516,GO:0030554,GO:0030587,GO:0030659,GO:0030705,GO:0030832,GO:0030833,GO:0030837,GO:0030863,GO:0030864,GO:0030865,GO:0030866,GO:0030898,GO:0030899,GO:0031032,GO:0031033,GO:0031034,GO:0031090,GO:0031097,GO:0031152,GO:0031154,GO:0031175,GO:0031252,GO:0031254,GO:0031256,GO:0031267,GO:0031268,GO:0031270,GO:0031333,GO:0031344,GO:0031346,GO:0031410,GO:0031475,GO:0031585,GO:0031589,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0031941,GO:0031965,GO:0031966,GO:0031967,GO:0031968,GO:0031975,GO:0031982,GO:0031987,GO:0032009,GO:0032027,GO:0032060,GO:0032153,GO:0032155,GO:0032252,GO:0032271,GO:0032272,GO:0032400,GO:0032401,GO:0032402,GO:0032409,GO:0032412,GO:0032432,GO:0032433,GO:0032465,GO:0032501,GO:0032502,GO:0032504,GO:0032505,GO:0032506,GO:0032535,GO:0032553,GO:0032555,GO:0032559,GO:0032593,GO:0032787,GO:0032796,GO:0032868,GO:0032869,GO:0032870,GO:0032878,GO:0032879,GO:0032880,GO:0032940,GO:0032956,GO:0032970,GO:0032982,GO:0032989,GO:0032990,GO:0032991,GO:0033036,GO:0033043,GO:0033059,GO:0033267,GO:0033275,GO:0033298,GO:0033365,GO:0033554,GO:0034461,GO:0034613,GO:0034622,GO:0034642,GO:0034643,GO:0034762,GO:0034765,GO:0035091,GO:0035254,GO:0035255,GO:0035618,GO:0035619,GO:0035639,GO:0035690,GO:0035838,GO:0036094,GO:0036477,GO:0038093,GO:0038094,GO:0038096,GO:0040001,GO:0040007,GO:0040008,GO:0040011,GO:0040012,GO:0040017,GO:0040019,GO:0042051,GO:0042052,GO:0042221,GO:0042303,GO:0042330,GO:0042438,GO:0042440,GO:0042461,GO:0042462,GO:0042470,GO:0042476,GO:0042493,GO:0042542,GO:0042552,GO:0042592,GO:0042594,GO:0042623,GO:0042633,GO:0042641,GO:0042642,GO:0042759,GO:0042802,GO:0042803,GO:0042886,GO:0042995,GO:0043005,GO:0043008,GO:0043025,GO:0043167,GO:0043168,GO:0043169,GO:0043197,GO:0043200,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043254,GO:0043269,GO:0043325,GO:0043332,GO:0043434,GO:0043436,GO:0043473,GO:0043531,GO:0043588,GO:0043900,GO:0043902,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044297,GO:0044309,GO:0044380,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044430,GO:0044433,GO:0044441,GO:0044444,GO:0044446,GO:0044448,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0044550,GO:0044703,GO:0044706,GO:0044764,GO:0044837,GO:0044877,GO:0045033,GO:0045111,GO:0045165,GO:0045177,GO:0045179,GO:0045184,GO:0045202,GO:0045335,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045773,GO:0045856,GO:0045921,GO:0045927,GO:0045995,GO:0046148,GO:0046189,GO:0046394,GO:0046530,GO:0046677,GO:0046683,GO:0046847,GO:0046872,GO:0046879,GO:0046903,GO:0046907,GO:0046982,GO:0046983,GO:0047497,GO:0048066,GO:0048193,GO:0048232,GO:0048278,GO:0048306,GO:0048308,GO:0048309,GO:0048311,GO:0048313,GO:0048364,GO:0048366,GO:0048367,GO:0048438,GO:0048467,GO:0048468,GO:0048469,GO:0048471,GO:0048513,GO:0048515,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048588,GO:0048589,GO:0048592,GO:0048608,GO:0048609,GO:0048638,GO:0048639,GO:0048646,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048749,GO:0048764,GO:0048765,GO:0048767,GO:0048768,GO:0048770,GO:0048812,GO:0048813,GO:0048814,GO:0048820,GO:0048827,GO:0048856,GO:0048858,GO:0048868,GO:0048869,GO:0048870,GO:0048871,GO:0048878,GO:0050767,GO:0050769,GO:0050770,GO:0050772,GO:0050773,GO:0050775,GO:0050776,GO:0050778,GO:0050789,GO:0050793,GO:0050794,GO:0050808,GO:0050848,GO:0050877,GO:0050878,GO:0050891,GO:0050896,GO:0050900,GO:0050931,GO:0050953,GO:0050982,GO:0051015,GO:0051017,GO:0051020,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051094,GO:0051128,GO:0051129,GO:0051130,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051270,GO:0051272,GO:0051279,GO:0051282,GO:0051285,GO:0051286,GO:0051293,GO:0051294,GO:0051301,GO:0051302,GO:0051493,GO:0051494,GO:0051591,GO:0051606,GO:0051640,GO:0051641,GO:0051643,GO:0051645,GO:0051646,GO:0051647,GO:0051648,GO:0051649,GO:0051650,GO:0051653,GO:0051654,GO:0051656,GO:0051674,GO:0051686,GO:0051703,GO:0051704,GO:0051716,GO:0051726,GO:0051875,GO:0051904,GO:0051905,GO:0051924,GO:0051960,GO:0051962,GO:0055037,GO:0055044,GO:0060001,GO:0060002,GO:0060151,GO:0060281,GO:0060282,GO:0060284,GO:0060327,GO:0060328,GO:0060341,GO:0060429,GO:0060560,GO:0060627,GO:0060996,GO:0060997,GO:0061024,GO:0061387,GO:0061458,GO:0061572,GO:0061573,GO:0061640,GO:0061645,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070382,GO:0070648,GO:0070649,GO:0070650,GO:0070727,GO:0070887,GO:0070938,GO:0071229,GO:0071230,GO:0071310,GO:0071375,GO:0071417,GO:0071495,GO:0071496,GO:0071520,GO:0071563,GO:0071695,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071889,GO:0071944,GO:0071963,GO:0071976,GO:0072330,GO:0072384,GO:0072657,GO:0072659,GO:0072676,GO:0072678,GO:0072697,GO:0080147,GO:0090066,GO:0090140,GO:0090426,GO:0090436,GO:0090558,GO:0090567,GO:0090596,GO:0090626,GO:0090627,GO:0090702,GO:0090726,GO:0097061,GO:0097159,GO:0097204,GO:0097367,GO:0097435,GO:0097447,GO:0097458,GO:0097518,GO:0097574,GO:0097575,GO:0097708,GO:0097718,GO:0097730,GO:0097731,GO:0097733,GO:0098588,GO:0098630,GO:0098657,GO:0098743,GO:0098773,GO:0098793,GO:0098794,GO:0098805,GO:0098840,GO:0098858,GO:0098862,GO:0098916,GO:0099080,GO:0099081,GO:0099089,GO:0099111,GO:0099118,GO:0099120,GO:0099173,GO:0099402,GO:0099503,GO:0099512,GO:0099513,GO:0099515,GO:0099518,GO:0099536,GO:0099537,GO:0099568,GO:0099640,GO:0099738,GO:0106027,GO:0110009,GO:0110053,GO:0120025,GO:0120031,GO:0120035,GO:0120036,GO:0120038,GO:0120039,GO:0120104,GO:0120117,GO:0140027,GO:0140029,GO:0140056,GO:0150034,GO:1900006,GO:1900076,GO:1900078,GO:1901019,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1901615,GO:1901617,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901981,GO:1902407,GO:1902410,GO:1902531,GO:1902716,GO:1902850,GO:1902875,GO:1902877,GO:1902903,GO:1902904,GO:1902936,GO:1903047,GO:1903076,GO:1903078,GO:1903119,GO:1903169,GO:1903260,GO:1903429,GO:1903431,GO:1903475,GO:1903478,GO:1903479,GO:1903530,GO:1903532,GO:1903541,GO:1903543,GO:1903827,GO:1903829,GO:1904062,GO:1904375,GO:1904377,GO:1904580,GO:1904582,GO:1904601,GO:1904752,GO:1904754,GO:1905392,GO:1905429,GO:1905430,GO:1905475,GO:1905477,GO:1905879,GO:1905881,GO:1990151,GO:1990753,GO:1990778,GO:1990819,GO:1990896,GO:1990904,GO:2000026,GO:2000145,GO:2000147,GO:2000241,GO:2000243,GO:2000689,GO:2000769,GO:2001257
EggNOG free text desc.	translation initiation factor activity
EggNOG OGs	COG5022@1,KOG0160@2759
COG Functional cat.	Z
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko01009,ko03019,ko03029,ko03036,ko04131,ko04147,ko04812
Hectar predicted targeting category	other localisation
Ec32 ortholog description	P-loop containing nucleoside triphosphate hydrolase
Ec32 ortholog	Ec-26_003660.1
Exons	4
Model size	651
Cds size	651
Stop	0
Start	0

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp9_F_contig10658.591.1	prot_Ecto-sp9_F_contig10658.591.1	Ectocarpus species9 EcSCA_722f female	polypeptide	Ecto-sp9_F_contig10658 178..2067 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622928284.0314612-CDS-Ecto-sp9_F_contig10658:177..447	1622928284.0314612-CDS-Ecto-sp9_F_contig10658:177..447	Ectocarpus species9 EcSCA_722f female	CDS	Ecto-sp9_F_contig10658 178..447 +
1692277820.5665367-CDS-Ecto-sp9_F_contig10658:177..447	1692277820.5665367-CDS-Ecto-sp9_F_contig10658:177..447	Ectocarpus species9 EcSCA_722f female	CDS	Ecto-sp9_F_contig10658 178..447 +
1622928284.046813-CDS-Ecto-sp9_F_contig10658:795..951	1622928284.046813-CDS-Ecto-sp9_F_contig10658:795..951	Ectocarpus species9 EcSCA_722f female	CDS	Ecto-sp9_F_contig10658 796..951 +
1692277820.658969-CDS-Ecto-sp9_F_contig10658:795..951	1692277820.658969-CDS-Ecto-sp9_F_contig10658:795..951	Ectocarpus species9 EcSCA_722f female	CDS	Ecto-sp9_F_contig10658 796..951 +
1622928284.0591047-CDS-Ecto-sp9_F_contig10658:1312..1495	1622928284.0591047-CDS-Ecto-sp9_F_contig10658:1312..1495	Ectocarpus species9 EcSCA_722f female	CDS	Ecto-sp9_F_contig10658 1313..1495 +
1692277820.6808689-CDS-Ecto-sp9_F_contig10658:1312..1495	1692277820.6808689-CDS-Ecto-sp9_F_contig10658:1312..1495	Ectocarpus species9 EcSCA_722f female	CDS	Ecto-sp9_F_contig10658 1313..1495 +
1622928284.0756207-CDS-Ecto-sp9_F_contig10658:2025..2067	1622928284.0756207-CDS-Ecto-sp9_F_contig10658:2025..2067	Ectocarpus species9 EcSCA_722f female	CDS	Ecto-sp9_F_contig10658 2026..2067 +
1692277820.6895185-CDS-Ecto-sp9_F_contig10658:2025..2067	1692277820.6895185-CDS-Ecto-sp9_F_contig10658:2025..2067	Ectocarpus species9 EcSCA_722f female	CDS	Ecto-sp9_F_contig10658 2026..2067 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp9_F_contig10658:178..2067+
coding sequence from alignment at Ecto-sp9_F_contig10658:178..2067+

protein sequence of mRNA_Ecto-sp9_F_contig10658.591.1

>prot_Ecto-sp9_F_contig10658.591.1 ID=prot_Ecto-sp9_F_contig10658.591.1|Name=mRNA_Ecto-sp9_F_contig10658.591.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=217bp
VFCRLFEWLVERINRSTASSAPDADGPGGAGAGAKTRHAGEALAPGGTVA
LLDIFGFESFKVNRFEQLCINYANEKLQQKFTQDVFKNVQAEYEEEGIPW
SHVDFSDNAEVLGLVESRMGIIAVLNEECVRPRGGDNSFVSKLATLHADH
SAFARAKLAGPFEFSVRHYAGEVLYHAEGFLDKNRDSVGEACRDLLAKSS
VPLIAKVFAPDPGSAEG

mRNA from alignment at Ecto-sp9_F_contig10658:178..2067+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp9_F_contig10658.591.1 ID=mRNA_Ecto-sp9_F_contig10658.591.1|Name=mRNA_Ecto-sp9_F_contig10658.591.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=1890bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10658:178..2067+ (Ectocarpus species9 EcSCA_722f female)
GTGTTTTGCAGGCTCTTCGAGTGGCTGGTTGAGCGCATCAATCGGAGCAC
GGCGTCTTCTGCTCCGGACGCCGATGGTCCGGGCGGGGCGGGGGCGGGCG
CAAAGACGAGACACGCGGGCGAGGCCCTGGCGCCGGGCGGCACGGTAGCC
CTCCTGGACATCTTCGGGTTCGAGAGCTTCAAGGTCAACCGCTTCGAGCA
GCTGTGCATCAACTACGCCAACGAGAAGCTGCAGCAGAAGTTCACCCAGG
ACGTCTTCAAGAACGTGCAGGTACGCCTGTTGGGCTCTTAGGAGGTCCGG
CGGTGTTAGTTCGCCCTTGACCGCATGACGTCCGTCGTGTTTCGTGTTGT
GGTGCGGTGTCCGAGATAGATCGGAAGCGTTGTGGGGTAGTGGAGGAGGC
GTGGGGAATCATCTGGGAGTATCTCATCTAGTGGTGTCCTTGTGTCCAGC
CAAAGGTCAATCGCGCTGCCTCCTTCTTCCCAGTTTTTATCTCCTCCTCC
CTCCTCCTCCTCCTCCTCCTCCCGCTGCCGTAAGTGTCGTGGTGTTTGTC
TGTCTTGACTCTGCCTATGTTGTGTGTGCTTGTTGTTCCCCTAATTCTCT
GTCGTGTCTCTCTCTCAGGCGGAGTACGAAGAGGAGGGCATCCCTTGGAG
CCACGTCGACTTCTCGGACAACGCTGAGGTGTTAGGTTTGGTGGAGAGCA
GGATGGGCATCATCGCCGTGCTCAACGAGGAGTGCGTCCGGCCCCGGGGA
GGCGACAACAGCTTTGTCAGCAAGGTGCGAGAAGGCGGGTAGGGGCAGGG
TAGCCGCGACGGTCTCGTGCTGTTCTTGCGTTGTATCAGAGGGCCTCGTG
TGGGTTGTTGTCTGTTGTTGATTTTTACTGGGTGTGCCGTGTTTGTCGCA
CGTAGCTTGGGTGTTGGGGCGGGGAGAGAGCAGGTGTACGTTTTTTGGCA
GCGACTATCCCGGCCGCAGGAGTGATTTATCATTCTGCGTGCAGTCTGAG
ACCCTTTCGGTCGGGAGCCCCAGCAACAACATTGCTGAGCCCCCCTTGCC
CCCTCCCCCTCCCCCCCCCGCCCCCCCTCCTGTGAACTCAATCGTGTACA
CGTCGAAACCTCGATGTTCCTTGTTGTTGTTTCAGCTGGCCACTCTCCAT
GCGGACCACTCGGCGTTCGCGAGGGCCAAGCTTGCCGGACCCTTCGAGTT
CTCCGTGCGGCACTACGCCGGGGAGGTCTTGTACCACGCCGAAGGCTTCC
TGGACAAGAACAGAGATAGCGTCGGCGAGGCCTGCCGGGACTTGCTGGCC
AAGAGCTCGGTGCCATTGGTGGGGAATGGAGGGGGGGGGGGGGGGGGGGG
GGGTGTTTTTTCCCACGCCCGGGGGGGTGGGGTCTTTTTGGGGGCGGGGG
GCAGGGAAAACAGAAACGGCGTGGGTTCTTNNNNNNNNNNCCTGAACAAG
AAAAGAAAAGGCGTGGGGGAGGCCGCCGGGGACTTGGGGGCCAAGGGCCG
GGGGCAATGGGGGGGGAAGGGGGGGGGGGGGGGGGGGGGGGGGCAGGTTT
TGCTAAGCACCCGCTGGATGGGTTGCTTCTTGCGGCGGGGCTCGTAGATA
CACGAAAGCGACATGTTCGTTACTTTAAGAAGGAGCCGGAAAGAAAGGTT
TATATGTTTGAAGACGGAGGGTTGCTTCTGCTGTTCTCCGTAGAAGGTGA
CGTGTGGGTGACGCGGAGAGTATCGCACCCTTCGAAACATTCGGTTTGCC
GTGGTGAGCTGTTTGGTTACCCTTATCCCCATGTTTCAGCCGCTCCGCTC
CTTTTGTGCGTGCCCGCTCCAGCTTACACCCGCCCTCATATCCCCCAGAT
CGCCAAAGTATTTGCTCCGGATCCCGGCTCCGCGGAAGGG

Coding sequence (CDS) from alignment at Ecto-sp9_F_contig10658:178..2067+

>mRNA_Ecto-sp9_F_contig10658.591.1 ID=mRNA_Ecto-sp9_F_contig10658.591.1|Name=mRNA_Ecto-sp9_F_contig10658.591.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1302bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10658:178..2067+ (Ectocarpus species9 EcSCA_722f female)
GTGTTTTGCAGGCTCTTCGAGTGGCTGGTTGAGCGCATCAATCGGAGCAC
GGCGTCTTCTGCTCCGGACGCCGATGGTCCGGGCGGGGCGGGGGCGGGCG
CAAAGACGAGACACGCGGGCGAGGCCCTGGCGCCGGGCGGCACGGTAGCC
CTCCTGGACATCTTCGGGTTCGAGAGCTTCAAGGTCAACCGCTTCGAGCA
GCTGTGCATCAACTACGCCAACGAGAAGCTGCAGCAGAAGTTCACCCAGG
ACGTCTTCAAGAACGTGCAGGTGTTTTGCAGGCTCTTCGAGTGGCTGGTT
GAGCGCATCAATCGGAGCACGGCGTCTTCTGCTCCGGACGCCGATGGTCC
GGGCGGGGCGGGGGCGGGCGCAAAGACGAGACACGCGGGCGAGGCCCTGG
CGCCGGGCGGCACGGTAGCCCTCCTGGACATCTTCGGGTTCGAGAGCTTC
AAGGTCAACCGCTTCGAGCAGCTGTGCATCAACTACGCCAACGAGAAGCT
GCAGCAGAAGTTCACCCAGGACGTCTTCAAGAACGTGCAGGCGGAGTACG
AAGAGGAGGGCATCCCTTGGAGCCACGTCGACTTCTCGGACAACGCTGAG
GTGTTAGGTTTGGTGGAGAGCAGGATGGGCATCATCGCCGTGCTCAACGA
GGAGTGCGTCCGGCCCCGGGGAGGCGACAACAGCTTTGTCAGCAAGGCGG
AGTACGAAGAGGAGGGCATCCCTTGGAGCCACGTCGACTTCTCGGACAAC
GCTGAGGTGTTAGGTTTGGTGGAGAGCAGGATGGGCATCATCGCCGTGCT
CAACGAGGAGTGCGTCCGGCCCCGGGGAGGCGACAACAGCTTTGTCAGCA
AGCTGGCCACTCTCCATGCGGACCACTCGGCGTTCGCGAGGGCCAAGCTT
GCCGGACCCTTCGAGTTCTCCGTGCGGCACTACGCCGGGGAGGTCTTGTA
CCACGCCGAAGGCTTCCTGGACAAGAACAGAGATAGCGTCGGCGAGGCCT
GCCGGGACTTGCTGGCCAAGAGCTCGGTGCCATTGCTGGCCACTCTCCAT
GCGGACCACTCGGCGTTCGCGAGGGCCAAGCTTGCCGGACCCTTCGAGTT
CTCCGTGCGGCACTACGCCGGGGAGGTCTTGTACCACGCCGAAGGCTTCC
TGGACAAGAACAGAGATAGCGTCGGCGAGGCCTGCCGGGACTTGCTGGCC
AAGAGCTCGGTGCCATTGATCGCCAAAGTATTTGCTCCGGATCCCGGCTC
CGCGGAAGGGATCGCCAAAGTATTTGCTCCGGATCCCGGCTCCGCGGAAG
GG