mRNA_Ecto-sp9_F_contig10642.585.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig10642.585.1
Unique NamemRNA_Ecto-sp9_F_contig10642.585.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10642.585.1 vs.
Match: Cysteine (desulfurase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSH6_ECTSI)

HSP 1 Score: 317 bits (813), Expect = 8.930e-105
Identity = 156/158 (98.73%), Postives = 157/158 (99.37%), Query Frame = 1 
Query:  136 MKQDKRYTPANKVPDEVLSAMGSDEIFSPGFSIKGQALAGRASYLDMQATTPMDPRALDAMMEYQLERYGNPHSRTHAYGWESEAVVEKAREQVANLIGASPKEIIFTSGATESNNMSIKGVARFYKGRKKHIITTQTEHKCVLDSCRAMEQEGYEAS 609
            MKQDKRYTPANKVPDEVLSAMGSDEIFSPGFSIKGQALAGRASYLDMQATTPMDPRALDAMMEYQLERYGNPHSRTHAYGWESEAVVEKAREQVANLIGASPKEIIFTSGATESNNMSIKGVARFYKGRKKHIITTQTEHKCVLDSCRAMEQEGYE +
Sbjct:    1 MKQDKRYTPANKVPDEVLSAMGSDEIFSPGFSIKGQALAGRASYLDMQATTPMDPRALDAMMEYQLERYGNPHSRTHAYGWESEAVVEKAREQVANLIGASPKEIIFTSGATESNNMSIKGVARFYKGRKKHIITTQTEHKCVLDSCRAMEQEGYEVT 158
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10642.585.1 vs.
Match: Cysteine (desulfurase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNJ7_9STRA)

HSP 1 Score: 251 bits (642), Expect = 5.380e-79
Identity = 118/158 (74.68%), Postives = 137/158 (86.71%), Query Frame = 1 
Query:  136 MKQDKRYTPANKVPDEVLSAMGSDEIFSPGFSIKGQALAGRASYLDMQATTPMDPRALDAMMEYQLERYGNPHSRTHAYGWESEAVVEKAREQVANLIGASPKEIIFTSGATESNNMSIKGVARFYKGRKKHIITTQTEHKCVLDSCRAMEQEGYEAS 609
            MK DKRY P  +VP+ VL  M +D +FSPGFSIKG++ AGRASYLDMQATTP+DPRALDAM+ + +  YGNPHSRTH+YGWE+E  VE AR Q+A+LIGASP+EIIFTSGATESNNMS+KGVARFY  RKKH+ITTQTEHKCVLDSCRAME+EGYE +
Sbjct:    1 MKADKRYEPVTEVPEVVLRNMSADTVFSPGFSIKGRSKAGRASYLDMQATTPLDPRALDAMLPWMMGGYGNPHSRTHSYGWEAEGAVEVARGQIADLIGASPREIIFTSGATESNNMSVKGVARFYASRKKHLITTQTEHKCVLDSCRAMEKEGYEVT 158
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10642.585.1 vs.
Match: Cysteine (desulfurase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812YIM4_9DINO)

HSP 1 Score: 241 bits (615), Expect = 5.960e-75
Identity = 110/158 (69.62%), Postives = 136/158 (86.08%), Query Frame = 1 
Query:  136 MKQDKRYTPANKVPDEVLSAMGSDEIFSPGFSIKGQALAGRASYLDMQATTPMDPRALDAMMEYQLERYGNPHSRTHAYGWESEAVVEKAREQVANLIGASPKEIIFTSGATESNNMSIKGVARFYKGRKKHIITTQTEHKCVLDSCRAMEQEGYEAS 609
            M +DKRY+ + KVP+ VLS M +D + SPGFSIKGQALAGR +YLDMQATTP+DPR LDAMM +  E+YGNPHSRTH++GWE+E  VE AR+QVA+LIGA+PKE++FTSGATESNN +IKG+ARFY+ RKKH+ITT TEHKCVLDSCR +E EG++ +
Sbjct:    1 MAKDKRYSASGKVPESVLSGMQADTVHSPGFSIKGQALAGRPAYLDMQATTPLDPRVLDAMMPFMTEQYGNPHSRTHSFGWEAEQAVEVARKQVADLIGANPKEVVFTSGATESNNAAIKGIARFYRNRKKHVITTTTEHKCVLDSCRWLEAEGWDVT 158
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10642.585.1 vs.
Match: Cysteine (desulfurase n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DDZ5_CAFRO)

HSP 1 Score: 239 bits (610), Expect = 5.540e-74
Identity = 113/170 (66.47%), Postives = 140/170 (82.35%), Query Frame = 1 
Query:  109 PVSSTSFDKMKQDKRYTPANKVPDEV---LSAMGSDEIFSPGFSIKGQALAGRASYLDMQATTPMDPRALDAMMEYQLERYGNPHSRTHAYGWESEAVVEKAREQVANLIGASPKEIIFTSGATESNNMSIKGVARFYKGRKKHIITTQTEHKCVLDSCRAMEQEGYEAS 609
            PV+STSFDKM  DKRY  + +VP+ V   + A  + E+ SPGFS++GQ L GR SYLDMQATTPMDPR LDAMM +  E+YGN HSRTH YGWE+EA VE+AREQVA+LIGASP+EIIFTSGATESNN++IKG+ARF + +++H++TTQ EHKCVLDSCR +E EG+E +
Sbjct:    5 PVASTSFDKMATDKRYAASGEVPEGVARNMQASAAGEVLSPGFSVRGQFLEGRPSYLDMQATTPMDPRVLDAMMPFLTEQYGNAHSRTHTYGWEAEAGVERAREQVASLIGASPREIIFTSGATESNNIAIKGIARFQRAKRRHVVTTQIEHKCVLDSCRWLEAEGFEVT 174
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10642.585.1 vs.
Match: Cysteine (desulfurase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNL7_9STRA)

HSP 1 Score: 237 bits (604), Expect = 2.400e-72
Identity = 111/162 (68.52%), Postives = 133/162 (82.10%), Query Frame = 1 
Query:  124 SFDKMKQDKRYTPANKVPDEVLSAMGSDEIFSPGFSIKGQALAGRASYLDMQATTPMDPRALDAMMEYQLERYGNPHSRTHAYGWESEAVVEKAREQVANLIGASPKEIIFTSGATESNNMSIKGVARFYKGRKKHIITTQTEHKCVLDSCRAMEQEGYEAS 609
            S +KM +DKRY P N+VP +VL +M + E+ SPGFSIKG+A  GRA+YLD QATTPMDPR +D M+ Y    +GNPHSRTH YGWE+EA VEKAREQVA+++GAS KEI+FTSGATESNN +IKGVA FY  +KKHIITTQ EHKCVLDSCR +EQEGY+ +
Sbjct:   83 SHEKMARDKRYKPQNEVPRQVLESMLAKEVHSPGFSIKGEAREGRAAYLDFQATTPMDPRVVDEMLPYMTGSFGNPHSRTHTYGWEAEAAVEKAREQVASILGASAKEIVFTSGATESNNAAIKGVAHFYGEKKKHIITTQIEHKCVLDSCRVLEQEGYQVT 244
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10642.585.1 vs.
Match: Cysteine (desulfurase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A898_9STRA)

HSP 1 Score: 233 bits (595), Expect = 1.080e-71
Identity = 108/155 (69.68%), Postives = 126/155 (81.29%), Query Frame = 1 
Query:  145 DKRYTPANKVPDEVLSAMGSDEIFSPGFSIKGQALAGRASYLDMQATTPMDPRALDAMMEYQLERYGNPHSRTHAYGWESEAVVEKAREQVANLIGASPKEIIFTSGATESNNMSIKGVARFYKGRKKHIITTQTEHKCVLDSCRAMEQEGYEAS 609
            DKRY P N VP+ ++    SDE+FSPGFSIKGQ+  GRA+YLD+QAT+P+DPR LD MM Y    YGNPHSRTHAYGW+++  VE AREQVA LIGA+ KE++FTSGATESNN  IKG+ARFY  +KKHIITTQ EHKCVLDSCRAME EGYE +
Sbjct:   26 DKRYKPVNDVPESIVQNAHSDEVFSPGFSIKGQSAPGRAAYLDVQATSPLDPRVLDKMMPYMTHNYGNPHSRTHAYGWDADKAVEHAREQVAQLIGANLKEVMFTSGATESNNTIIKGIARFYGAKKKHIITTQIEHKCVLDSCRAMESEGYEVT 180
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10642.585.1 vs.
Match: Cysteine (desulfurase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BY07_SAPPC)

HSP 1 Score: 232 bits (592), Expect = 3.040e-71
Identity = 107/161 (66.46%), Postives = 130/161 (80.75%), Query Frame = 1 
Query:  127 FDKMKQDKRYTPANKVPDEVLSAMGSDEIFSPGFSIKGQALAGRASYLDMQATTPMDPRALDAMMEYQLERYGNPHSRTHAYGWESEAVVEKAREQVANLIGASPKEIIFTSGATESNNMSIKGVARFYKGRKKHIITTQTEHKCVLDSCRAMEQEGYEAS 609
            F     DKRY P N+VP+ V++   SD++FSPGFSIKGQ+ +GRA+YLD+QAT+P+DPR LD MM Y    YGNPHSRTHA+GW+++  VE AREQVA+LI A+ KE++FTSGATESNN  IKG+ARFY  +KKHIITTQ EHKCVLDSCRAME EGYE +
Sbjct:   19 FASAPDDKRYKPVNEVPEAVIANAHSDQVFSPGFSIKGQSSSGRAAYLDVQATSPLDPRVLDKMMPYMTHNYGNPHSRTHAFGWDADKAVEHAREQVASLIAANAKEVMFTSGATESNNTIIKGIARFYGAKKKHIITTQIEHKCVLDSCRAMESEGYEVT 179
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10642.585.1 vs.
Match: Cysteine (desulfurase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XGN9_9STRA)

HSP 1 Score: 228 bits (581), Expect = 1.450e-69
Identity = 106/154 (68.83%), Postives = 124/154 (80.52%), Query Frame = 1 
Query:  142 QDKRYTPANKVPDEVLSAMGSDEIFSPGFSIKGQALAGRASYLDMQATTPMDPRALDAMMEYQLERYGNPHSRTHAYGWESEAVVEKAREQVANLIGASPKEIIFTSGATESNNMSIKGVARFYKGRKKHIITTQTEHKCVLDSCRAMEQEGYE 603
            +DKRY P N+VP+ VL    S+E+FSPGFSIKGQ   GRA+YLD+QAT P+DPR LD MM +    YGNPHSRTHA+GW+S+  VE AR QVA+LIGA PKEI+FTSGATESNN  IKG+  FYK +KKHIITTQ EHKCVLDSCRA+E EG+E
Sbjct:   27 EDKRYKPVNEVPEAVLKNAHSEEVFSPGFSIKGQHARGRAAYLDVQATAPLDPRVLDKMMSHMTHSYGNPHSRTHAFGWDSDNAVEHARGQVASLIGADPKEIMFTSGATESNNTIIKGIGHFYKSKKKHIITTQIEHKCVLDSCRALESEGFE 180
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10642.585.1 vs.
Match: Cysteine (desulfurase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KNY2_9STRA)

HSP 1 Score: 228 bits (580), Expect = 2.100e-69
Identity = 105/155 (67.74%), Postives = 125/155 (80.65%), Query Frame = 1 
Query:  145 DKRYTPANKVPDEVLSAMGSDEIFSPGFSIKGQALAGRASYLDMQATTPMDPRALDAMMEYQLERYGNPHSRTHAYGWESEAVVEKAREQVANLIGASPKEIIFTSGATESNNMSIKGVARFYKGRKKHIITTQTEHKCVLDSCRAMEQEGYEAS 609
            DKRY P N+VPD VL    SD++FSPGFSIKGQ   GRA+YLD+QAT+P+DPR LD MME+    YGNPHSRTH+YGW+++  VE AR QVA L+GA  KEI+FTSGATESNN  IKG+ RFYK +KKH+ITTQ EHKCVLDSCRA+E EG+E +
Sbjct:   28 DKRYKPVNEVPDVVLQNAHSDQVFSPGFSIKGQHTQGRAAYLDVQATSPLDPRVLDKMMEHMTHGYGNPHSRTHSYGWDADKAVEHARTQVAALVGADAKEIMFTSGATESNNTIIKGIGRFYKAKKKHVITTQIEHKCVLDSCRALEAEGFEVT 182
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10642.585.1 vs.
Match: Hypothetical (protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C0V8_9STRA)

HSP 1 Score: 223 bits (568), Expect = 2.220e-69
Identity = 112/171 (65.50%), Postives = 139/171 (81.29%), Query Frame = 1 
Query:  106 TPVSSTSF--DKMKQDKRYTPANKVPDEVLSAMGSDEIFSPGFSIKGQALAGRASYLDMQATTPMDPRALDAMMEYQLERYGNPHSRTHAYGWESEAVVEKAREQVANLIGAS-PKEIIFTSGATESNNMSIKGVARFYKGRKKHIITTQTEHKCVLDSCRAMEQEGYEAS 609
            TPV  T+F  ++M+ DKRY    ++P+ +L  +  DE  S  FSI+G+A  GRA YLDM ATTP+DPR LDAM+ Y +  YGNPHSRTH+YGWESE++VEKAREQ+A+LIGAS PKEIIFTSGATESNN+SIKGVA FY  +K+H+ITTQTEHKCVLDSCR++EQEG+E +
Sbjct:   64 TPVPPTTFSEERMRTDKRYQSDKQIPEALLKKI--DEDISE-FSIRGKAKEGRAVYLDMSATTPLDPRVLDAMLPYTIGSYGNPHSRTHSYGWESESIVEKAREQIASLIGASSPKEIIFTSGATESNNLSIKGVAHFYGKKKRHVITTQTEHKCVLDSCRSLEQEGFEVT 231
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10642.585.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Cysteine8.930e-10598.73desulfurase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8... [more]
Cysteine5.380e-7974.68desulfurase n=1 Tax=Tribonema minus TaxID=303371 R... [more]
Cysteine5.960e-7569.62desulfurase n=1 Tax=Symbiodinium sp. KB8 TaxID=230... [more]
Cysteine5.540e-7466.47desulfurase n=1 Tax=Cafeteria roenbergensis TaxID=... [more]
Cysteine2.400e-7268.52desulfurase n=2 Tax=Monodopsidaceae TaxID=425072 R... [more]
Cysteine1.080e-7169.68desulfurase n=1 Tax=Thraustotheca clavata TaxID=74... [more]
Cysteine3.040e-7166.46desulfurase n=3 Tax=Saprolegniaceae TaxID=4764 Rep... [more]
Cysteine1.450e-6968.83desulfurase n=1 Tax=Aphanomyces euteiches TaxID=10... [more]
Cysteine2.100e-6967.74desulfurase n=1 Tax=Aphanomyces stellatus TaxID=12... [more]
Hypothetical2.220e-6965.50protein n=1 Tax=Proboscia inermis TaxID=420281 Rep... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10642contigEcto-sp9_F_contig10642:938..4248 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score235.0
Seed ortholog evalue3.2e-59
Seed eggNOG ortholog112098.XP_008606406.1
Preferred nameNFS1
KEGG rclassRC01789,RC02313
KEGG koko:K04487
KEGG ReactionR07460,R11528,R11529
KEGG Pathwayko00730,ko01100,ko04122,map00730,map01100,map04122
GOsGO:0000096,GO:0000166,GO:0000959,GO:0000963,GO:0002097,GO:0002098,GO:0002143,GO:0003674,GO:0003824,GO:0004123,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006082,GO:0006139,GO:0006163,GO:0006396,GO:0006399,GO:0006400,GO:0006464,GO:0006520,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006873,GO:0006875,GO:0006879,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009144,GO:0009150,GO:0009199,GO:0009205,GO:0009259,GO:0009451,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016226,GO:0016740,GO:0016782,GO:0016783,GO:0016829,GO:0016846,GO:0017076,GO:0018130,GO:0018282,GO:0018283,GO:0019538,GO:0019637,GO:0019693,GO:0019725,GO:0019752,GO:0022607,GO:0030003,GO:0030554,GO:0031071,GO:0031163,GO:0031974,GO:0031981,GO:0032324,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0036211,GO:0042278,GO:0042592,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043545,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044571,GO:0046039,GO:0046128,GO:0046483,GO:0046872,GO:0046914,GO:0046916,GO:0046983,GO:0048878,GO:0050801,GO:0051186,GO:0051188,GO:0051189,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0055086,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070525,GO:0070900,GO:0070903,GO:0071704,GO:0071840,GO:0072521,GO:0090304,GO:0090407,GO:0090646,GO:0097159,GO:0097367,GO:0098771,GO:0140053,GO:1900864,GO:1901068,GO:1901135,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1990221
EggNOG free text desc.cysteine desulfurase activity
EggNOG OGsCOG1104@1,KOG1549@2759
EC2.8.1.7
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko02048,ko03016,ko03029
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionCysteine desulfurase
Ec32 orthologEc-21_003740.1
Exons4
Model size609
Cds size609
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10642.585.1prot_Ecto-sp9_F_contig10642.585.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig10642 938..4248 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928283.415501-CDS-Ecto-sp9_F_contig10642:937..10341622928283.415501-CDS-Ecto-sp9_F_contig10642:937..1034Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10642 938..1034 +
1692277820.2865539-CDS-Ecto-sp9_F_contig10642:937..10341692277820.2865539-CDS-Ecto-sp9_F_contig10642:937..1034Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10642 938..1034 +
1622928283.434629-CDS-Ecto-sp9_F_contig10642:2751..29241622928283.434629-CDS-Ecto-sp9_F_contig10642:2751..2924Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10642 2752..2924 +
1692277820.2975638-CDS-Ecto-sp9_F_contig10642:2751..29241692277820.2975638-CDS-Ecto-sp9_F_contig10642:2751..2924Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10642 2752..2924 +
1622928283.4504743-CDS-Ecto-sp9_F_contig10642:3304..34811622928283.4504743-CDS-Ecto-sp9_F_contig10642:3304..3481Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10642 3305..3481 +
1692277820.3123724-CDS-Ecto-sp9_F_contig10642:3304..34811692277820.3123724-CDS-Ecto-sp9_F_contig10642:3304..3481Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10642 3305..3481 +
1622928283.466858-CDS-Ecto-sp9_F_contig10642:4086..42481622928283.466858-CDS-Ecto-sp9_F_contig10642:4086..4248Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10642 4087..4248 +
1692277820.3248215-CDS-Ecto-sp9_F_contig10642:4086..42481692277820.3248215-CDS-Ecto-sp9_F_contig10642:4086..4248Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10642 4087..4248 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig10642.585.1

>prot_Ecto-sp9_F_contig10642.585.1 ID=prot_Ecto-sp9_F_contig10642.585.1|Name=mRNA_Ecto-sp9_F_contig10642.585.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=203bp
MLLRAGKTSGCVRTRTWSSAAASLQHCRSMSSGTSTPVSSTSFDKMKQDK
RYTPANKVPDEVLSAMGSDEIFSPGFSIKGQALAGRASYLDMQATTPMDP
RALDAMMEYQLERYGNPHSRTHAYGWESEAVVEKAREQVANLIGASPKEI
IFTSGATESNNMSIKGVARFYKGRKKHIITTQTEHKCVLDSCRAMEQEGY
EAS
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mRNA from alignment at Ecto-sp9_F_contig10642:938..4248+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig10642.585.1 ID=mRNA_Ecto-sp9_F_contig10642.585.1|Name=mRNA_Ecto-sp9_F_contig10642.585.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=3311bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10642:938..4248+ (Ectocarpus species9 EcSCA_722f female)
ATGCTTCTTCGTGCAGGGAAGACGTCCGGGTGTGTCAGGACGAGGACATG
GTCCTCTGCGGCAGCGAGCCTTCAACATTGCCGAAGCATGTCGAGCGGTG
CGTTTTTTTGAGTCATCGTCTGTGTGCTGATGCTGTCCCCAGGTGCAGAC
ATCAGGTCTTTTCGCAGCAGCAGCAGGGTGTGTAGAGTCGCCAGGCTCCC
AGACCTAGGCCTACCTGCCGCATCCATGTGTACGTGCCTATGCTTGTGCC
TGGCATGTACCCCCCTGATACTTGCCTGCAGCAGCTCGTGACGTGCGGCG
TAAAAACCAAGTGCAACTTGCCGCTGCTGCCGTCAAGCAACAGAGCTATC
CATACGGCTCTGCGGCTTTGGTACTGCGGTACTGCTATAGGTCGCGTTTT
TTGTTGCCGCTCCTTGCGGAAATGTCTCGACGAAGGCCGGTTGGGACCAA
TCAATTGCTTCCACGTTGCCACAATCGTGTTGGAGTAGAGAGAGAAGGGC
ATGGCCGCACGGATGTGGTGGTTTTACGTTCTGTCTCCTTCATCGGTGCC
GCAAACGTTGATTTCAGCCGCAGAAGCGTATGTAGCAGCAGCAGTAGCAG
CGGGTGACCGATTGGGACGCACAGAAGGAGCAGGCTGGAGGGAGAAACCT
CAACGTGCTCTGCTACGAAACTGTGTCGTCTCACAACCATACTTTGTATG
CCTTTTATATTTGCAGTTCGCAACATTGTAGCGGCGTCATGATACACGTA
TGCACGTATGTATACCCAAGGGGGCATCACGTACACGTAGTGCTGTGCCG
CTGTGCCTGTTAGGGCTCGGCGCGTTTAGGAAGTGGAACGTGTACCGTAA
CAAGTGCGGGGAACGCACCGCAGTGGTGCTATCGATATTGAAGCTCGATT
CCTCCACAACCAAGAGGCTGCCGATGCCGCCGAAGGAAGAGTCTTTCTCG
TGGAGAGCTTCCCTTGTAAATTGTTGCGTGTCGGGAGTGGTCGGATTTCG
CACCCCCTTTTTTGGGGGCAATATATCCATCTTTTACGGTGCGTCCACCC
CGCATTTTTGTCAGCTGATGTTTGCAAGTTTCTACTACATATACACACAG
CAAAATCGACAGTTCCGAGTGTTTTTCGCTCGACTCTACATTCTCGTTTT
CCAGCGTGGTCACCCTCGTTTCGCTCGGTGAGGTTCACGGTCGGAGATGG
TTTTGCACACCACACACGGCAGTGCGGGCCGTTAACGCAGCCGCACGCAC
AACGCACTCGCTCGCACCCCACGAGTCACGAGCGGACACGAACAGACCCT
GCCGCTCGCCATTCTTCCGTTATGGCGCCCATGCCAACCCCGTTTACTCA
CACCTTCTAACGGGGGCGGAGGTTCTTGCCGACCTAAGACAACTGCACGA
ACGCGTCTACAGCAGGACTTGCGGCTGAAACTGCTGTACTCTCGAAAGGC
TCGAAGGGGTTAGTTAGCAATCTGTGGGAGACGTTGCAGACGTGAGCAAA
CCACAGCAGCAGTCACGTTTTGTGTTCGGTCCTCAGCTTGTTTTGGACAC
GAACTTCTATTCGACAGCAGTATGTCGGGGTTTTGTTGCCTGCGTTCTCT
CCCGTCTTGCCACCCCTGTCTCGTTGGCTTGACAACCCCCAGCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCGCCCCCCCCCCGCCCCCCCCCCGCCCCCC
GGCNNNNNNNNNNTGGGGTTTTTTTTGCGTGGGCTCCCCCCGGTCTTTCC
CCCCCGGGTTCGTTGGTTTGCCCCCCCCCCCCCCCCCCCCCCTCCGACAC
CGCGCGGGCAACAGGCACCAGCACTCCCGTCAGCAGCACCTCCTTCGACA
AGATGAAGCAGGACAAGCGGTACACGCCGGCCAACAAGGTGCCCGACGAG
GTGCTGTCGGCCATGGGCAGCGACGAGATATTCTCCCCGGGCTTCAGCAT
CAAGGGGCAGGCGTTGGCGGGGAGGGCGTCCTACCTGGTGAGCGAGAGAC
TGACTGCCTACGCACCCCTCTTTTTGTGGCTTTTATCTCCAAAATCGACC
ATTCCAAAAGGAGCGGGCGCCTCGTGCTGCTATATATCAGATTCGTTTTT
TTGTCGTGTTGCGCGTGTGCTGGAGGACGCAATAGGAACGCCGACATCGA
CAGCAGAACAACATCAAAACCGATCGCACACGGGAAAAACCGTTTGTTTG
ACGTGCACTCGCGTCGTGGCTTCGCACACCAAAACACACCACCGCCACAT
CACATGGTTTTAGTCCGACGATATGCGCGTACATACTACATACCACACGC
CATAATGCACGGCGGCTGGTCCGAAGCTTGCCCCTTCCTGTGTACGGCTG
CTGTTGCGAGGAAACAGGACATGCAGGCGACCACGCCGATGGACCCGCGT
GCCCTGGACGCCATGATGGAGTACCAGCTAGAGCGCTACGGGAACCCCCA
CTCGAGGACGCACGCCTACGGGTGGGAGAGCGAGGCCGTCGTCGAGAAGG
CCAGGGAGCAGGTCGCCAATCTTATCGGGGCGTCTCCCAAGGAGGTACGG
GCAGGGGCCACGCACGGAATCGTGCGTGTGCGTGATGGTTACTTTGGTGA
TATATGTATATTTTAGCTGGGGAGTACATATAGGGAGGGGAGTGCGGGAA
CAACAGCAGTAGCGCATTCGTGTGCGTGGTGGATACTATGGTGACATGTT
TTTTAGCTGGTGGCAAACGGGAGAGGGTGCGGGAAACATGTGGTACATAG
CGGAGACAGCGGTGCGCACCGGAAATGGCCTCGTTCGGCGACGAACGGGG
CGGTGGTGGCTTGGAGGGAGGGAGGGAGGAGTCCATAGAGGCCGGTCGGG
GTGCGTCACGTGGTGCCCACCTGCTTGCTGGAGTCACGTGGCGCTCTACA
CGAGCCGTTTTCTTTTCACGGTTTTGAAGCGAAAAAAAATTGCGGTCGTT
GTGTTGTGTGCGCTGCTGTGCGCCTTAGCTGCCTCGCCTCCCCCCCCCCC
TCCCGCCGGCTCTAACTCAACAGTCGATGTGCTCCCATAGGGCCACGCTT
CATCCATGCCTTGGACTTAACGCTGCTGTGGTTTTGGACTCCCGCCCTCT
ACACCGTCCTTGGTTTTGTTTTTTGTTCGGATGACGTCATGAATTGCAGA
TTATTTTCACTTCGGGGGCGACGGAGTCGAACAACATGTCCATCAAGGGG
GTGGCGCGGTTCTATAAGGGCCGCAAGAAGCACATCATCACCACGCAAAC
GGAGCACAAGTGCGTCCTGGACAGCTGCCGTGCGATGGAGCAGGAGGGCT
ACGAGGCGAGC
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig10642:938..4248+

>mRNA_Ecto-sp9_F_contig10642.585.1 ID=mRNA_Ecto-sp9_F_contig10642.585.1|Name=mRNA_Ecto-sp9_F_contig10642.585.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1218bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10642:938..4248+ (Ectocarpus species9 EcSCA_722f female)
ATGCTTCTTCGTGCAGGGAAGACGTCCGGGTGTGTCAGGACGAGGACATG
GTCCTCTGCGGCAGCGAGCCTTCAACATTGCCGAAGCATGTCGAGCGATG
CTTCTTCGTGCAGGGAAGACGTCCGGGTGTGTCAGGACGAGGACATGGTC
CTCTGCGGCAGCGAGCCTTCAACATTGCCGAAGCATGTCGAGCGGCACCA
GCACTCCCGTCAGCAGCACCTCCTTCGACAAGATGAAGCAGGACAAGCGG
TACACGCCGGCCAACAAGGTGCCCGACGAGGTGCTGTCGGCCATGGGCAG
CGACGAGATATTCTCCCCGGGCTTCAGCATCAAGGGGCAGGCGTTGGCGG
GGAGGGCGTCCTACCTGGCACCAGCACTCCCGTCAGCAGCACCTCCTTCG
ACAAGATGAAGCAGGACAAGCGGTACACGCCGGCCAACAAGGTGCCCGAC
GAGGTGCTGTCGGCCATGGGCAGCGACGAGATATTCTCCCCGGGCTTCAG
CATCAAGGGGCAGGCGTTGGCGGGGAGGGCGTCCTACCTGGACATGCAGG
CGACCACGCCGATGGACCCGCGTGCCCTGGACGCCATGATGGAGTACCAG
CTAGAGCGCTACGGGAACCCCCACTCGAGGACGCACGCCTACGGGTGGGA
GAGCGAGGCCGTCGTCGAGAAGGCCAGGGAGCAGGTCGCCAATCTTATCG
GGGCGTCTCCCAAGGAGGACATGCAGGCGACCACGCCGATGGACCCGCGT
GCCCTGGACGCCATGATGGAGTACCAGCTAGAGCGCTACGGGAACCCCCA
CTCGAGGACGCACGCCTACGGGTGGGAGAGCGAGGCCGTCGTCGAGAAGG
CCAGGGAGCAGGTCGCCAATCTTATCGGGGCGTCTCCCAAGGAGATTATT
TTCACTTCGGGGGCGACGGAGTCGAACAACATGTCCATCAAGGGGGTGGC
GCGGTTCTATAAGGGCCGCAAGAAGCACATCATCACCACGCAAACGGAGC
ACAAGTGCGTCCTGGACAGCTGCCGTGCGATGGAGCAGGAGGGCTACGAG
GCGAGCATTATTTTCACTTCGGGGGCGACGGAGTCGAACAACATGTCCAT
CAAGGGGGTGGCGCGGTTCTATAAGGGCCGCAAGAAGCACATCATCACCA
CGCAAACGGAGCACAAGTGCGTCCTGGACAGCTGCCGTGCGATGGAGCAG
GAGGGCTACGAGGCGAGC
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