mRNA_Ecto-sp9_F_contig1064.581.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig1064.581.1
Unique NamemRNA_Ecto-sp9_F_contig1064.581.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig1064.581.1 vs.
Match: Similar (to 20S proteasome alpha5 subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBM5_ECTSI)

HSP 1 Score: 765 bits (1976), Expect = 8.000e-276
Identity = 403/424 (95.05%), Postives = 408/424 (96.23%), Query Frame = 2
Query:   32 MRFTFGVLLLISPGALRVRSVAHVRRKAPVREKKAYDTSVRAFSPDGSIYQVEYAVQAADKGGLTIGVQTDKGLVLAAHGRRRSPLLKASSVSKIADVDDGRMCCAMSGLLPDGRLLLDYARTWVQEHRFEFDEAPSVEAVASQLSRLALKFNGYDKDGKAGNGGREEEDGGGQAMSRPVGVALLMAGVDRGDRPVLYHLDPSGAYVQWRARAIGDKGAAAEAKLEGVGPFEGMSVRRAMAAVLGVLREVLGDDEFSTDRLEMVCVDMMGGGRGSGDGGGGERGVCSPGAEHGTTSASDHDNVGGGGDDGAISGPPFAGEGSSVSAAPPSMSXXXXXXXXXXXARSFVGRDSGSSGGGGVLEGGVEVGQEDGSSAASGVGRSSAAASFVPRCGYFRRVPKSEMDELLAGSTRGDGKESPTAANG 1303
            MRFTFGVLLLISPGALRVRSVAHVRRKAPVREKKAYDTSVRAFSPDGSIYQVEYAV+AADKGGLTIGVQTDKGLVLAAHGRRRSPLLKASSVSKIADVDDGRMCCAMSGLLPDGRLLLDYARTWVQEHRFEFDEAPSVEAVASQLSRLALKFNGYDKDGKAGNGGREEEDGGG AMSRPVGVALLMAGVDRGDRPVLYHLDPSGAYVQWRARAIGDKGAAAEAKLEGVGPFEGMSVRRAMAAVLGVLREVLGDDEFSTDRLEMVCVDMMGGGRGSGDGGGGERGVCSPGAEHG TSASDHDNVGGGGD GAISGPPFAGEGSSVSAAPPS+S            R+FVGRDSGSSGGGGVLEGGVEVG+EDGSSAASGVGRSSAAASFVPR GYFRRVPKSEMDELLAGSTRGDG+ESPTAANG
Sbjct:    1 MRFTFGVLLLISPGALRVRSVAHVRRKAPVREKKAYDTSVRAFSPDGSIYQVEYAVEAADKGGLTIGVQTDKGLVLAAHGRRRSPLLKASSVSKIADVDDGRMCCAMSGLLPDGRLLLDYARTWVQEHRFEFDEAPSVEAVASQLSRLALKFNGYDKDGKAGNGGREEEDGGGPAMSRPVGVALLMAGVDRGDRPVLYHLDPSGAYVQWRARAIGDKGAAAEAKLEGVGPFEGMSVRRAMAAVLGVLREVLGDDEFSTDRLEMVCVDMMGGGRGSGDGGGGERGVCSPGAEHGATSASDHDNVGGGGD-GAISGPPFAGEGSSVSAAPPSLSGGGVNDGSASGVRNFVGRDSGSSGGGGVLEGGVEVGREDGSSAASGVGRSSAAASFVPRYGYFRRVPKSEMDELLAGSTRGDGEESPTAANG 423          
BLAST of mRNA_Ecto-sp9_F_contig1064.581.1 vs.
Match: Proteasome (subunit alpha type n=8 Tax=Mandibulata TaxID=197563 RepID=E9HGR7_DAPPU)

HSP 1 Score: 169 bits (429), Expect = 2.020e-45
Identity = 94/234 (40.17%), Postives = 142/234 (60.68%), Query Frame = 2
Query:  128 KKAYDTSVRAFSPDGSIYQVEYAVQAADKGGLTIGVQTDKGLVLAAHGRRRSPLLKASSVSKIADVDDGRMCCAMSGLLPDGRLLLDYARTWVQEHRFEFDEAPSVEAVASQLSRLALKFNGYDKDGKAGNGGREEEDGGGQAMSRPVGVALLMAGVDRGDRPVLYHLDPSGAYVQWRARAIGDKGAAAEAKLEGVGPFEGMSVRRAMAAVLGVLREVLGDDEFSTDRLEMVCV 829
            +  YD  V  FSP+G ++QVEYA++A   G   IG+QT +G+VLA   R  SPL++ +++ KI ++D   + CA+SGL+ D R ++D AR   Q H F +DE  SVE+VA  +S LA++F   D DG A              MSRP GVA+L AG+D    P L+H+DPSG YVQ+ A+AIG     A+  L+     + M+++ AM A L +L++V+ +++ S+  +E+  V
Sbjct:    5 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVVLAVEKRITSPLMEPTTIEKIVEIDK-HIGCAVSGLMADSRTMVDRARVEAQNHWFTYDEKMSVESVAQAVSNLAIQFGDSDDDGNA--------------MSRPFGVAILFAGIDE-KGPQLFHMDPSGTYVQYDAKAIGSGSEGAQQSLQEA-YNKSMTLKSAMKAALTILKQVM-EEKLSSTNVEVAAV 220          
BLAST of mRNA_Ecto-sp9_F_contig1064.581.1 vs.
Match: Proteasome (subunit alpha type n=10 Tax=Lophotrochozoa TaxID=1206795 RepID=A0A6J8E1S9_MYTCO)

HSP 1 Score: 169 bits (427), Expect = 3.810e-45
Identity = 94/234 (40.17%), Postives = 143/234 (61.11%), Query Frame = 2
Query:  128 KKAYDTSVRAFSPDGSIYQVEYAVQAADKGGLTIGVQTDKGLVLAAHGRRRSPLLKASSVSKIADVDDGRMCCAMSGLLPDGRLLLDYARTWVQEHRFEFDEAPSVEAVASQLSRLALKFNGYDKDGKAGNGGREEEDGGGQAMSRPVGVALLMAGVDRGDRPVLYHLDPSGAYVQWRARAIGDKGAAAEAKLEGVGPFEGMSVRRAMAAVLGVLREVLGDDEFSTDRLEMVCV 829
            +  YD  V  FSP+G ++QVEYA++A   G   IG+QT +G+VLA   R  SPL++A+S+ K+ ++DD  + CAMSGL+ D R L+D AR   Q H F ++E  SVE+V   +S +AL+F   D D  A              MSRP GVALL AG+D+   P LYH+DPSG ++Q+ A+AIG     A+  L+ V   + M+++ A  + L +L++V+ +++ ++  +EM  V
Sbjct:    5 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVVLAVEKRVTSPLIEAASIEKVFEIDD-HIGCAMSGLIADSRTLIDRARVEAQNHWFTYNEKMSVESVTQSVSNVALQFGDDDADPGA--------------MSRPFGVALLFAGIDK-KGPQLYHMDPSGTFIQYDAKAIGSGSEGAQQALQDV-YHKSMTLKEACKSALTILKQVM-EEKLNSTNVEMAKV 220          
BLAST of mRNA_Ecto-sp9_F_contig1064.581.1 vs.
Match: Proteasome (subunit alpha type n=2 Tax=Echinacea TaxID=7674 RepID=A0A7M7ST72_STRPU)

HSP 1 Score: 168 bits (426), Expect = 5.310e-45
Identity = 94/234 (40.17%), Postives = 149/234 (63.68%), Query Frame = 2
Query:  128 KKAYDTSVRAFSPDGSIYQVEYAVQAADKGGLTIGVQTDKGLVLAAHGRRRSPLLKASSVSKIADVDDGRMCCAMSGLLPDGRLLLDYARTWVQEHRFEFDEAPSVEAVASQLSRLALKFNGYDKDGKAGNGGREEEDGGGQAMSRPVGVALLMAGVDRGDRPVLYHLDPSGAYVQWRARAIGDKGAAAEAKLEGVGPFEGMSVRRAMAAVLGVLREVLGDDEFSTDRLEMVCV 829
            +  YD  V  FSP+G ++QVEYA++A   G   IG++T++G+VLA   R  SPL++A+S+ KI ++D   + CAMSGL+ D R ++D AR   Q H F ++E  SVE+V   +S LAL+F     D +AG+G          AMSRP GVALL AG+D+   P+LYH+DPSG ++Q+ A+AIG     A+++L+ V   + ++++ A    L VL++V+ +++ S+  +E+  +
Sbjct:    5 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIRTNEGIVLAVEKRVTSPLMEATSIEKIVEIDS-HIGCAMSGLIADSRTMIDRARVEAQSHWFTYNEKMSVESVTQAVSNLALQFG----DDEAGSG----------AMSRPFGVALLFAGIDQ-KGPILYHMDPSGTFLQFDAKAIGSGSEGAQSQLQEVF-HKSLTLKEACKESLVVLKQVM-EEKLSSTNVEVATI 220          
BLAST of mRNA_Ecto-sp9_F_contig1064.581.1 vs.
Match: Proteasome (subunit alpha type n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y5E9_GALSU)

HSP 1 Score: 168 bits (426), Expect = 7.290e-45
Identity = 93/234 (39.74%), Postives = 144/234 (61.54%), Query Frame = 2
Query:  128 KKAYDTSVRAFSPDGSIYQVEYAVQAADKGGLTIGVQTDKGLVLAAHGRRRSPLLKASSVSKIADVDDGRMCCAMSGLLPDGRLLLDYARTWVQEHRFEFDEAPSVEAVASQLSRLALKFNGYDKDGKAGNGGREEEDGGGQAMSRPVGVALLMAGVDRGDRPVLYHLDPSGAYVQWRARAIGDKGAAAEAKLEGVGPFEGMSVRRAMAAVLGVLREVLGDDEFSTDRLEMVCV 829
            +  YD  V  FSP+G ++QVEYA++A   G   +G+QT +G+VLA   R  SPLL+ +SV K+ ++D+  + CAMSGL+ D R ++++AR   Q HRF FDEA  VE++      LAL+F         G G  ++ED   + MSRP GV+LL+AGVD    P L++ DPSG Y++W A+AIG     A++ L+    ++ M+++ A    L  LREV+ +++  ++ +E+  V
Sbjct:    5 RSEYDRGVNTFSPEGRLFQVEYAMEAIKLGSTAVGIQTAEGVVLAVEKRLSSPLLEPNSVEKLVEIDE-HVGCAMSGLVADARTMIEHARVEAQNHRFTFDEAMPVESLTQATCDLALRF---------GEGVEDDEDKEEEMMSRPFGVSLLIAGVDN-KGPALFYTDPSGTYIRWLAKAIGAGAEGAQSALQEA-YYKSMTLKEAETLALRTLREVM-EEKVESNNVEVAAV 225          
BLAST of mRNA_Ecto-sp9_F_contig1064.581.1 vs.
Match: Proteasome (subunit alpha type n=4 Tax=Cicadomorpha TaxID=33365 RepID=A0A1B6EX92_9HEMI)

HSP 1 Score: 168 bits (426), Expect = 9.420e-45
Identity = 95/234 (40.60%), Postives = 145/234 (61.97%), Query Frame = 2
Query:  128 KKAYDTSVRAFSPDGSIYQVEYAVQAADKGGLTIGVQTDKGLVLAAHGRRRSPLLKASSVSKIADVDDGRMCCAMSGLLPDGRLLLDYARTWVQEHRFEFDEAPSVEAVASQLSRLALKFNGYDKDGKAGNGGREEEDGGGQAMSRPVGVALLMAGVDRGDRPVLYHLDPSGAYVQWRARAIGDKGAAAEAKLEGVGPFEGMSVRRAMAAVLGVLREVLGDDEFSTDRLEMVCV 829
            +  YD  V  FSP+G ++QVEYA++A   G   +G+ T +G+VLA   R  SPLL+ +++ KI +VD   + CA+SGL+ D R L+D AR   Q H F +DE  SVE+VA  +S LA++F   D+DG A              MSRP GVA+L AG+D    P L+H+DPSG +VQ+ A+AIG     A+  L+ V   + M+++ A+ AVL +L++V+ +++ ++  +E+V V
Sbjct:    5 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTALGICTSEGVVLAVEKRITSPLLELTTIEKIVEVDK-HIACAVSGLIADSRTLVDRARVECQNHWFIYDERMSVESVAQAVSNLAIQFGDSDEDGAA--------------MSRPFGVAILFAGIDE-KGPQLFHMDPSGTFVQFDAKAIGSGSEGAQQSLQEV-YHKSMTLKEAINAVLTILKQVM-EEKLNSTNVEVVTV 220          
BLAST of mRNA_Ecto-sp9_F_contig1064.581.1 vs.
Match: Nucleophile (aminohydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY71_9STRA)

HSP 1 Score: 169 bits (428), Expect = 1.420e-44
Identity = 100/252 (39.68%), Postives = 153/252 (60.71%), Query Frame = 2
Query:   80 RVRSVAHVRRKAPV-REKKAYDTSVRAFSPDGSIYQVEYAVQAADKGGLTIGVQTDKGLVLAAHGRRRSPLLKASSVSKIADVDDGRMCCAMSGLLPDGRLLLDYARTWVQEHRFEFDEAPSVEAVASQLSRLALKFNGYDKDGKAGNGGREEEDGGGQAMSRPVGVALLMAGVDRGDRPVLYHLDPSGAYVQWRARAIGDKGAAAEAKLEGV-GPFEGMSVRRAMAAVLGVLREVLGDDEFSTDRLEMVCV 829
            RV +V+H  R+ PV R ++ YD     FSP+G++YQVEYA ++  +G L +G+    G++L A  +++SPLL   SV KI  VD G + CA+SGL PDGRLL+  AR ++  H   ++E PSV+++A+ LS + L FN Y +D        EE     +  +RP+GV LL+AG D  D P L  L+P+G+  +W A+A+G    AA+  L  + G  + + +  A+  V+ +  ++LGDD F TDRLE+  +
Sbjct:   27 RVLAVSHAIRQKPVSRTQRMYDMDAAVFSPEGNLYQVEYATKSVLRGSLAVGLVASDGVLLVATNQKQSPLLLPESVRKIVHVD-GTIACAVSGLQPDGRLLVKQARAYLAHHDRLYEEVPSVDSIAAHLSNVCLLFNNYPEDPN------EER----KMHARPLGVGLLLAGWDD-DGPALLFLNPAGSQGRWHAKAMGRDSEAADKLLRSLLGTRDMLHLETALPKVVKIFHDLLGDD-FCTDRLEVTLL 265          
BLAST of mRNA_Ecto-sp9_F_contig1064.581.1 vs.
Match: Proteasome (subunit alpha type n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7JUL7_BUGNE)

HSP 1 Score: 167 bits (422), Expect = 2.000e-44
Identity = 96/234 (41.03%), Postives = 142/234 (60.68%), Query Frame = 2
Query:  128 KKAYDTSVRAFSPDGSIYQVEYAVQAADKGGLTIGVQTDKGLVLAAHGRRRSPLLKASSVSKIADVDDGRMCCAMSGLLPDGRLLLDYARTWVQEHRFEFDEAPSVEAVASQLSRLALKFNGYDKDGKAGNGGREEEDGGGQAMSRPVGVALLMAGVDRGDRPVLYHLDPSGAYVQWRARAIGDKGAAAEAKLEGVGPFEGMSVRRAMAAVLGVLREVLGDDEFSTDRLEMVCV 829
            +  YD  V  FSP+G ++QVEYA++A   G   IG+QT +G+VLA   R  SPL++A S+ KI +VD   + CAMSGL+ D R L+D AR   Q H F +DE  SVE+V   +S LAL F   D D + G            AMSRP GVALL AG+D  + P L+HLDPSG ++++ A+AIG     A+  L+ V   + M++  A+  V+ +L++V+ +++ ++  +E+  V
Sbjct:    5 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLQTSEGVVLAVEKRVTSPLIEADSIEKIFEVDS-HLGCAMSGLIADSRTLIDRARVEAQNHWFTYDEKMSVESVTQSVSNLALAFG--DDDAEPG------------AMSRPFGVALLFAGIDE-NGPQLFHLDPSGTFIRYDAKAIGSASEGAQQSLQDVF-HKSMNLETAIKEVMKILKQVM-EEKLTSKNVELAIV 220          
BLAST of mRNA_Ecto-sp9_F_contig1064.581.1 vs.
Match: Proteasome (subunit alpha type n=3 Tax=Ciona TaxID=7718 RepID=F6Z491_CIOIN)

HSP 1 Score: 166 bits (421), Expect = 2.870e-44
Identity = 94/234 (40.17%), Postives = 137/234 (58.55%), Query Frame = 2
Query:  128 KKAYDTSVRAFSPDGSIYQVEYAVQAADKGGLTIGVQTDKGLVLAAHGRRRSPLLKASSVSKIADVDDGRMCCAMSGLLPDGRLLLDYARTWVQEHRFEFDEAPSVEAVASQLSRLALKFNGYDKDGKAGNGGREEEDGGGQAMSRPVGVALLMAGVDRGDRPVLYHLDPSGAYVQWRARAIGDKGAAAEAKLEGVGPFEGMSVRRAMAAVLGVLREVLGDDEFSTDRLEMVCV 829
            +  YD  V  FSP+G ++QVEYA++A   G   IG+QT  G+VLA   R  SPL++ASS+ K+ ++D   + CAMSGL+ D + ++D AR   Q H F FDE   V+++   +S LAL+F               EED    AMSRP GVALL AG D G  P LYHLDPSG +V   A+AIG     A+  LE     + M++  A  ++L +L++V+ +++ ++  +E+  V
Sbjct:    5 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTADGVVLAVEKRITSPLIEASSIEKVFEIDT-HVGCAMSGLIADSKTMIDRARVEAQNHWFTFDEKMRVQSITKAVSNLALQFG--------------EEDSEPGAMSRPFGVALLFAGYDEGLGPQLYHLDPSGTFVSCSAKAIGSASEGAQTSLEEQF-HKSMTIEEAQKSILTILKQVM-EEKLTSTNVEVATV 221          
BLAST of mRNA_Ecto-sp9_F_contig1064.581.1 vs.
Match: Proteasome (subunit alpha type n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NLH8_PORUM)

HSP 1 Score: 166 bits (421), Expect = 3.130e-44
Identity = 95/234 (40.60%), Postives = 133/234 (56.84%), Query Frame = 2
Query:  128 KKAYDTSVRAFSPDGSIYQVEYAVQAADKGGLTIGVQTDKGLVLAAHGRRRSPLLKASSVSKIADVDDGRMCCAMSGLLPDGRLLLDYARTWVQEHRFEFDEAPSVEAVASQLSRLALKFNGYDKDGKAGNGGREEEDGGGQAMSRPVGVALLMAGVDRGDRPVLYHLDPSGAYVQWRARAIGDKGAAAEAKLEGVGPFEGMSVRRAMAAVLGVLREVLGDDEFSTDRLEMVCV 829
            +  YD  V  FSP+G ++QVEYA++A   G   +G+ T +G++LA   R  SPLL  SS+ K+ ++D   +  AMSGL  D R L+D+ R   QEHRF +DE  SVE+    L  LAL+F            G +  D G  AM+RP GVALL+AGVD    P LYH DPSG YV+W A+AIG     A+  L+      GM++  A    L  L+ V+ +++ S + +E+  V
Sbjct:    5 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGICTTEGVILAVEKRLTSPLLTPSSIEKVLEIDT-HIGAAMSGLTADARTLIDHGRIVTQEHRFTYDEPLSVESTTQSLCDLALRF------------GEDGRDDGADAMARPFGVALLIAGVDDEGGPALYHTDPSGTYVKWMAKAIGAGSEGAQTALQEAWSA-GMTLAEAEGLALKTLKAVM-EEKVSGENVEVAAV 223          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1064.581.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Similar8.000e-27695.05to 20S proteasome alpha5 subunit n=2 Tax=Ectocarpu... [more]
Proteasome2.020e-4540.17subunit alpha type n=8 Tax=Mandibulata TaxID=19756... [more]
Proteasome3.810e-4540.17subunit alpha type n=10 Tax=Lophotrochozoa TaxID=1... [more]
Proteasome5.310e-4540.17subunit alpha type n=2 Tax=Echinacea TaxID=7674 Re... [more]
Proteasome7.290e-4539.74subunit alpha type n=1 Tax=Galdieria sulphuraria T... [more]
Proteasome9.420e-4540.60subunit alpha type n=4 Tax=Cicadomorpha TaxID=3336... [more]
Nucleophile1.420e-4439.68aminohydrolase n=1 Tax=Tribonema minus TaxID=30337... [more]
Proteasome2.000e-4441.03subunit alpha type n=1 Tax=Bugula neritina TaxID=1... [more]
Proteasome2.870e-4440.17subunit alpha type n=3 Tax=Ciona TaxID=7718 RepID=... [more]
Proteasome3.130e-4440.60subunit alpha type n=1 Tax=Porphyra umbilicalis Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1064contigEcto-sp9_F_contig1064:9490..14119 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score766.9
Seed ortholog evalue4.9e-219
Seed eggNOG ortholog2880.D8LBM5
Preferred namePSMA5
KEGG koko:K02729,ko:K12388
KEGG TC9.A.63.1.3
KEGG Pathwayko03050,ko04142,ko04722,ko04979,map03050,map04142,map04722,map04979
KEGG ModuleM00337,M00340
GOsGO:0000502,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0005839,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006810,GO:0006887,GO:0006955,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010498,GO:0010499,GO:0012505,GO:0016020,GO:0016192,GO:0016579,GO:0019538,GO:0019773,GO:0019941,GO:0030141,GO:0030163,GO:0031410,GO:0031597,GO:0031974,GO:0031981,GO:0031982,GO:0031983,GO:0032940,GO:0032991,GO:0034515,GO:0034774,GO:0036211,GO:0036230,GO:0042119,GO:0042175,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0043412,GO:0043632,GO:0043687,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044433,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0046903,GO:0050896,GO:0051179,GO:0051234,GO:0051603,GO:0060205,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0097708,GO:0099503,GO:0101002,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1904813,GO:1905368,GO:1905369
EggNOG free text desc.threonine-type endopeptidase activity
EggNOG OGsCOG0638@1,KOG0176@2759
EC3.4.25.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko02000,ko03051
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionNucleophile aminohydrolases, N-terminal
Ec32 orthologEc-27_003410.1
Exons6
Model size1672
Cds size1290
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1064.581.1prot_Ecto-sp9_F_contig1064.581.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig1064 9506..13753 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928282.94494-UTR-Ecto-sp9_F_contig1064:9489..95051622928282.94494-UTR-Ecto-sp9_F_contig1064:9489..9505Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1064 9490..9505 +
1692277820.096675-UTR-Ecto-sp9_F_contig1064:9489..95051692277820.096675-UTR-Ecto-sp9_F_contig1064:9489..9505Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1064 9490..9505 +
1622928283.0633872-UTR-Ecto-sp9_F_contig1064:13753..141191622928283.0633872-UTR-Ecto-sp9_F_contig1064:13753..14119Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1064 13754..14119 +
1692277820.1619098-UTR-Ecto-sp9_F_contig1064:13753..141191692277820.1619098-UTR-Ecto-sp9_F_contig1064:13753..14119Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1064 13754..14119 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928282.9630227-CDS-Ecto-sp9_F_contig1064:9505..95911622928282.9630227-CDS-Ecto-sp9_F_contig1064:9505..9591Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1064 9506..9591 +
1692277820.106153-CDS-Ecto-sp9_F_contig1064:9505..95911692277820.106153-CDS-Ecto-sp9_F_contig1064:9505..9591Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1064 9506..9591 +
1622928282.9804904-CDS-Ecto-sp9_F_contig1064:10518..106001622928282.9804904-CDS-Ecto-sp9_F_contig1064:10518..10600Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1064 10519..10600 +
1692277820.1134846-CDS-Ecto-sp9_F_contig1064:10518..106001692277820.1134846-CDS-Ecto-sp9_F_contig1064:10518..10600Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1064 10519..10600 +
1622928282.997876-CDS-Ecto-sp9_F_contig1064:11031..112431622928282.997876-CDS-Ecto-sp9_F_contig1064:11031..11243Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1064 11032..11243 +
1692277820.1235287-CDS-Ecto-sp9_F_contig1064:11031..112431692277820.1235287-CDS-Ecto-sp9_F_contig1064:11031..11243Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1064 11032..11243 +
1622928283.0114384-CDS-Ecto-sp9_F_contig1064:11945..121171622928283.0114384-CDS-Ecto-sp9_F_contig1064:11945..12117Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1064 11946..12117 +
1692277820.1309035-CDS-Ecto-sp9_F_contig1064:11945..121171692277820.1309035-CDS-Ecto-sp9_F_contig1064:11945..12117Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1064 11946..12117 +
1622928283.028304-CDS-Ecto-sp9_F_contig1064:12475..125481622928283.028304-CDS-Ecto-sp9_F_contig1064:12475..12548Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1064 12476..12548 +
1692277820.1447644-CDS-Ecto-sp9_F_contig1064:12475..125481692277820.1447644-CDS-Ecto-sp9_F_contig1064:12475..12548Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1064 12476..12548 +
1622928283.0473742-CDS-Ecto-sp9_F_contig1064:13088..137531622928283.0473742-CDS-Ecto-sp9_F_contig1064:13088..13753Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1064 13089..13753 +
1692277820.1539955-CDS-Ecto-sp9_F_contig1064:13088..137531692277820.1539955-CDS-Ecto-sp9_F_contig1064:13088..13753Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1064 13089..13753 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig1064.581.1

>prot_Ecto-sp9_F_contig1064.581.1 ID=prot_Ecto-sp9_F_contig1064.581.1|Name=mRNA_Ecto-sp9_F_contig1064.581.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=430bp
MRFTAMRFTFGVLLLISPGALRVRSVAHVRRKAPVREKKAYDTSVRAFSP
DGSIYQVEYAVQAADKGGLTIGVQTDKGLVLAAHGRRRSPLLKASSVSKI
ADVDDGRMCCAMSGLLPDGRLLLDYARTWVQEHRFEFDEAPSVEAVASQL
SRLALKFNGYDKDGKAGNGGREEEDGGGQAMSRPVGVALLMAGVDRGDRP
VLYHLDPSGAYVQWRARAIGDKGAAAEAKLEGVGPFEGMSVRRAMAAVLG
VLREVLGDDEFSTDRLEMVCVDMMGGGRGSGDGGGGERGVCSPGAEHGTT
SASDHDNVGGGGDDGAISGPPFAGEGSSVSAAPPSMSGGGVSDGSASGAR
SFVGRDSGSSGGGGVLEGGVEVGQEDGSSAASGVGRSSAAASFVPRCGYF
RRVPKSEMDELLAGSTRGDGKESPTAANG*
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mRNA from alignment at Ecto-sp9_F_contig1064:9490..14119+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig1064.581.1 ID=mRNA_Ecto-sp9_F_contig1064.581.1|Name=mRNA_Ecto-sp9_F_contig1064.581.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=4630bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1064:9490..14119+ (Ectocarpus species9 EcSCA_722f female)
CCGTGCGCCTTCCGCGATGAGGTTTACAGCGATGAGGTTTACGTTCGGCG TGCTGCTGCTGATTTCTCCAGGGGCCCTACGCGTTAGATCGGTGGCACAT GTGTGAGTAATTTTTTCAAATTTCGATTCGCTGGTGTCTAATGTCTACTG ATGATACTCTACAATACAGCGCCGCAACATATCAGAATACCACACCCCGT GGACCAATTCCAAAGCTCGATTACTCCACGACGAAGAGGATGCATAAACC GAAGGATGCGTTTCCGGAAAGCACTCGACGGGGCAGTTCCAACGCCGCCA TTCTCGTCACCGTCACTTTTTTGGCTTTATCAGGCGATCAAGCTTGAAAA TCGATCCAACGGCACAAACTCTCAACAGTGTTTGTATGCATACATTGTTG TTGTTGTTGTTGGTGTTGTTGTCTTCACATTAAAAACCATTCTGGTCTCC GCTCAGTACCTTCTAATGTCCGTACTGGTCCAACTGACGCAATAATAGTA CACGTACATATCAAGCATGTTGCATGCAAAACTGCTGGTCTCGCTCGATG ACCCTCCCACCCGGCTGGTGAGGAGATCCGGAATCGCTCGCGACGCAGAC CTCTCCCAAAAGTTCGAAAGAGACAAAAAAACGAGGCTCTCGGAGAGGAA GGTCTATTGCGGCAGCCTTGAACTGTTTTGGCCGGCTGCCATTACCCGAA CTGATGAGATCCCAGTAGCCTTGGCAGAGGGTTCCTCTATTAATTGTGCA TTTTGGATAAAGCATGCAATCGGGGAAGTTCAGTTGGGTGAGGGTTAGGG ATAGGGTCTGCGTCACAACCCCCTCCCTGTTCTCTGTCCTCAATGCACTT GTTCTTATTTTCTCGCGAAGGCGGTCCGGGCATGAGGCAGCATCATCCCA CAGGCCCTCGATAAGGCTCGGCGATCAAGCACCTCCATATCGTTACTTAC ACATGGACTTACCTGGTGCTGGAGATGGACCACTGAACAACGATGTCTGT GTCTCCTCTCTCTTGCACGCTTTATGCAGGCGCCGAAAAGCTCCGGTTCG GGAAAAGAAGGCGTACGACACAAGCGTGAGAGCTTTCTCCCCGGACGGTT CCATCTATCAGGTACGTCAACGTTGGAAGAGCTGTGTTGATGCTCATGTA TGGTAAACGCTGTGGCTGTTTTCAACCATATGTAGAGCGATCTGATGCCA GAGCTTCCAGCACCGCAAGAAACTTGCCACTATGGCACACACGTCGGCGC AGAGATGGAAACAAGGCAAGCAAAAGTTGATCAACGTAGAAGTGCGGATA GACGGATAGACAGGCACGCAGTCGGGCAGAGACAAGAGGCAAAGGACTAG GTGAATAGAACTGCTGCAGCTGTAAACGGTTCCATACCAGCACAGATGTA CATGTTTTTGATGTATTTCTTTCCACCTCGCTGCCGGCGCCAACGTAACC GACGGACACCAGAACCTCTTCCTGCGAAACTCGAAAGACGTGTTCACAAG ACGCCCAGACCCACACGACAATCACGCCCGCCCACCCCCCAGGTGGAGTA CGCCGTCCAAGCCGCGGACAAGGGGGGCCTGACGATCGGCGTGCAGACGG ACAAGGGCCTGGTGCTCGCGGCGCACGGGCGGCGGCGCTCGCCGCTCCTC AAGGCCTCCTCGGTGTCCAAGATTGCCGACGTGGACGACGGGCGCATGTG CTGCGCCATGTCCGGGCTGCTCCCGGACGGCCGCTTGCTGCTCGACTACG CGCGGTGAGATAGTTAGGCCTCGCAGCGACCCCTCGTACGCACAGCAGTA TGTTTGAGGCCCCCGTGCCTTCTTACGGAGGCTACCGTGCCCACCCAAGG TAGTATTGAGTATGTCTGGGGACTAGGTTAAGCCAGGACCGATGCAGATG ATATAGAACCTTGATTATCACACACCCGTGCTCCTTCCAGCACAGTTCAT ACATGGTGAACATAGGCTGAACACATGCGCGGGCTCTCTCTCTCGAGGGG CCCCGCACTTGGACCCCCAATAGCATACCCCCCCTACACACGTACTCCCA AGATCGGATCTTGTGTCCAAGTGCCCCACACACCGTATGCACATACCTGT TTTTTTTGCTCATGTTTGAACCTTTTTTTTTTACGTGCCCGGTATGTGTG TCGGCAGCCTCTCTCTGATGACGTATTTGCGGAACGAGGGCTTGACTGGA AGTCCGACTGATCGTGACGATGTGGAACGTATTTCCGCGCCCGTCACTTT CCCCCCCCTCAGAAAGTTTCCCCGTGTGAAGCTTTGTGGCACGACCGTAA AAAAAAATCCCACCCGCACTGTTGTCTCTCCCACCCGCACTGTTGTCTCT CCAACCGTCCGTCCTCCCGTCGGCCGGTCGTTTGCTTGTGTCTTGTCTGT CGGCGGAACAAACGCGCACACGGCATCACGAACCACAAACACACATGCAT TCATAGCACGTGGGTCCAAGAGCACCGCTTCGAGTTTGACGAGGCTCCTA GCGTGGAGGCGGTGGCGTCCCAGCTCAGCCGCCTGGCGCTCAAGTTCAAC GGCTATGACAAGGACGGGAAGGCCGGTAACGGCGGGCGGGAGGAAGAGGA CGGCGGCGGCCAGGCCATGTCTCGGCCGGTGAGAGTTATGTAGCGAAGAA CGGCCCGGCTGTTGTAGAAGCTCGAAGAACGTTGTACAGGGGGTTGGTAT CAAATGTCCCCCTGTTATTGCTTGGCGATGCCGTACACTTTTTTTTCACG CGATGAATGCATGCACGGGGTGTGTGTAGCGCAGTGGTCTTTCCTCTACC GGTCACTTGACTGACTGACTTGCTGCTCGTAGACTCACTTGCTTATTGCT CGCTTGTGCACCACCGATCAAATCGCTGCTCGGTTAGTTTTGCCTCGCCA GCATGAAACGATGGAAACGAAGGCAGAAAGCCCGTTGTTGTGTGCGAACG CTTCTTCCCTTCTCGTTTGTTGTCTTCTGGTGTCAGGTGGGCGTGGCCCT TCTCATGGCGGGAGTAGATCGCGGGGATCGGCCGGTGCTGTACCACTTGG ATCCTTCCGGTGAGCAGCGGAGGAAAGGGCAGGCTCGCTTGTTGCATGCT TCGACGTTTTAGCGGACGTCTTTGAAGGGAGTGCCGCGAACTGATGGCAC ATCGGACAGCACCCGACTACAGCAGTATGGCTTCGATGAGTGTTTTTCTG GAGGGGAAGGGTAGTGGAGGGGGGCAGGAGTCGTTCTTTGCCTGCGTGTC TGAATGATGAACGCGTTTTTTTCTACACCGAGGACGTGGCACCGATTATT TTCCCTCCTTAGAGACTTCCTTTCCTTTCCAACACGTCGGCGCTCATTCC ATCGCCATGCCTTTTTGCACCCCACCTTGAAATGCCCTTGTTTTACTCGT CGCCGACTCCTCCTCCTCATCCTCCTTTGCTCTACTCCTCCTTTGCTCTT TTTGCCCTTGTGCGCTAGAAAGACGCGGTACACAGCCGCCTCACCTATCG TGGCATCCCCAGATTTGCCGCTTGCCGACCTCCCATGGTATGGGCTTTCG TTGTCCTGTTTTCTCACTTTTGGTCCCGCCTTTCGTGTGTCTCGCGTAGG AGCCTACGTGCAGTGGAGGGCGAGGGCCATCGGCGACAAGGGTGCCGCCG CGGAAGCAAAGCTGGAGGGGGTTGGGCCCTTCGAGGGCATGAGCGTGCGG CGCGCGATGGCCGCTGTGCTCGGGGTGCTCCGGGAGGTGCTGGGCGACGA CGAGTTTTCCACGGACCGGCTGGAAATGGTGTGCGTGGACATGATGGGCG GGGGGCGTGGCAGCGGGGACGGGGGAGGGGGAGAGAGAGGAGTATGTTCG CCAGGCGCGGAGCACGGCACCACAAGCGCCAGCGATCACGATAACGTTGG TGGTGGTGGTGATGATGGTGCTATTTCTGGGCCTCCTTTCGCTGGCGAGG GGTCGTCGGTTAGTGCTGCACCGCCTTCGATGTCGGGAGGGGGGGTTAGC GACGGGAGCGCTAGCGGTGCTCGCAGTTTTGTCGGTCGAGATAGCGGGAG TAGTGGTGGTGGCGGCGTGCTAGAGGGGGGTGTTGAGGTTGGGCAGGAGG ATGGGTCGTCGGCAGCATCTGGCGTTGGTCGTTCCTCCGCCGCTGCCTCT TTTGTGCCGCGCTGCGGGTATTTTCGACGAGTTCCCAAAAGCGAGATGGA CGAGCTGCTTGCTGGAAGCACCAGAGGTGACGGCAAAGAGTCGCCAACAG CAGCGAATGGTTAGAAGATTTGTTTAGTTCGGAATGATGCGGAGGCGTTA TGGTGTTGTATCTAGCTGTTGGGTGTTGTTAAATAGTGACGTGGTGCGAA AGGTGTATTATAGAAGCGTGATTTCGCATTGTTGATGTGTCGTGTCCCAC CTGAACATTTCACATTTAACATCAATGCGCGTTGTGGCGCGGAAGCTTCT CGGCTCAAACATCGCACCGTCATGGATTGCGCGAAGACCATGCATGTTGC ACCTGAGATGTCTCCCACCGCATGTGTGGGTCTGTTTCTTGTGTGAGTGC GTTGCACCCTCGACGAGCTTACTTACACCTACTCTAGTCCCACCTTTCGC TGACAACAATTTTCTGCAGAAACACGTACG
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1064:9490..14119+

>mRNA_Ecto-sp9_F_contig1064.581.1 ID=mRNA_Ecto-sp9_F_contig1064.581.1|Name=mRNA_Ecto-sp9_F_contig1064.581.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2580bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1064:9490..14119+ (Ectocarpus species9 EcSCA_722f female)
ATGAGGTTTACAGCGATGAGGTTTACGTTCGGCGTGCTGCTGCTGATTTC
TCCAGGGGCCCTACGCGTTAGATCGGTGGCACATGTATGAGGTTTACAGC
GATGAGGTTTACGTTCGGCGTGCTGCTGCTGATTTCTCCAGGGGCCCTAC
GCGTTAGATCGGTGGCACATGTGCGCCGAAAAGCTCCGGTTCGGGAAAAG
AAGGCGTACGACACAAGCGTGAGAGCTTTCTCCCCGGACGGTTCCATCTA
TCAGGCGCCGAAAAGCTCCGGTTCGGGAAAAGAAGGCGTACGACACAAGC
GTGAGAGCTTTCTCCCCGGACGGTTCCATCTATCAGGTGGAGTACGCCGT
CCAAGCCGCGGACAAGGGGGGCCTGACGATCGGCGTGCAGACGGACAAGG
GCCTGGTGCTCGCGGCGCACGGGCGGCGGCGCTCGCCGCTCCTCAAGGCC
TCCTCGGTGTCCAAGATTGCCGACGTGGACGACGGGCGCATGTGCTGCGC
CATGTCCGGGCTGCTCCCGGACGGCCGCTTGCTGCTCGACTACGCGCGGT
GGAGTACGCCGTCCAAGCCGCGGACAAGGGGGGCCTGACGATCGGCGTGC
AGACGGACAAGGGCCTGGTGCTCGCGGCGCACGGGCGGCGGCGCTCGCCG
CTCCTCAAGGCCTCCTCGGTGTCCAAGATTGCCGACGTGGACGACGGGCG
CATGTGCTGCGCCATGTCCGGGCTGCTCCCGGACGGCCGCTTGCTGCTCG
ACTACGCGCGCACGTGGGTCCAAGAGCACCGCTTCGAGTTTGACGAGGCT
CCTAGCGTGGAGGCGGTGGCGTCCCAGCTCAGCCGCCTGGCGCTCAAGTT
CAACGGCTATGACAAGGACGGGAAGGCCGGTAACGGCGGGCGGGAGGAAG
AGGACGGCGGCGGCCAGGCCATGTCTCGGCCGCACGTGGGTCCAAGAGCA
CCGCTTCGAGTTTGACGAGGCTCCTAGCGTGGAGGCGGTGGCGTCCCAGC
TCAGCCGCCTGGCGCTCAAGTTCAACGGCTATGACAAGGACGGGAAGGCC
GGTAACGGCGGGCGGGAGGAAGAGGACGGCGGCGGCCAGGCCATGTCTCG
GCCGGTGGGCGTGGCCCTTCTCATGGCGGGAGTAGATCGCGGGGATCGGC
CGGTGCTGTACCACTTGGATCCTTCCGGTGGGCGTGGCCCTTCTCATGGC
GGGAGTAGATCGCGGGGATCGGCCGGTGCTGTACCACTTGGATCCTTCCG
GAGCCTACGTGCAGTGGAGGGCGAGGGCCATCGGCGACAAGGGTGCCGCC
GCGGAAGCAAAGCTGGAGGGGGTTGGGCCCTTCGAGGGCATGAGCGTGCG
GCGCGCGATGGCCGCTGTGCTCGGGGTGCTCCGGGAGGTGCTGGGCGACG
ACGAGTTTTCCACGGACCGGCTGGAAATGGTGTGCGTGGACATGATGGGC
GGGGGGCGTGGCAGCGGGGACGGGGGAGGGGGAGAGAGAGGAGTATGTTC
GCCAGGCGCGGAGCACGGCACCACAAGCGCCAGCGATCACGATAACGTTG
GTGGTGGTGGTGATGATGGTGCTATTTCTGGGCCTCCTTTCGCTGGCGAG
GGGTCGTCGGTTAGTGCTGCACCGCCTTCGATGTCGGGAGGGGGGGTTAG
CGACGGGAGCGCTAGCGGTGCTCGCAGTTTTGTCGGTCGAGATAGCGGGA
GTAGTGGTGGTGGCGGCGTGCTAGAGGGGGGTGTTGAGGTTGGGCAGGAG
GATGGGTCGTCGGCAGCATCTGGCGTTGGTCGTTCCTCCGCCGCTGCCTC
TTTTGTGCCGCGCTGCGGGTATTTTCGACGAGTTCCCAAAAGCGAGATGG
ACGAGCTGCTTGCTGGAAGCACCAGAGGTGACGGCAAAGAGTCGCCAACA
GCAGCGAATGGTTAGGAGCCTACGTGCAGTGGAGGGCGAGGGCCATCGGC
GACAAGGGTGCCGCCGCGGAAGCAAAGCTGGAGGGGGTTGGGCCCTTCGA
GGGCATGAGCGTGCGGCGCGCGATGGCCGCTGTGCTCGGGGTGCTCCGGG
AGGTGCTGGGCGACGACGAGTTTTCCACGGACCGGCTGGAAATGGTGTGC
GTGGACATGATGGGCGGGGGGCGTGGCAGCGGGGACGGGGGAGGGGGAGA
GAGAGGAGTATGTTCGCCAGGCGCGGAGCACGGCACCACAAGCGCCAGCG
ATCACGATAACGTTGGTGGTGGTGGTGATGATGGTGCTATTTCTGGGCCT
CCTTTCGCTGGCGAGGGGTCGTCGGTTAGTGCTGCACCGCCTTCGATGTC
GGGAGGGGGGGTTAGCGACGGGAGCGCTAGCGGTGCTCGCAGTTTTGTCG
GTCGAGATAGCGGGAGTAGTGGTGGTGGCGGCGTGCTAGAGGGGGGTGTT
GAGGTTGGGCAGGAGGATGGGTCGTCGGCAGCATCTGGCGTTGGTCGTTC
CTCCGCCGCTGCCTCTTTTGTGCCGCGCTGCGGGTATTTTCGACGAGTTC
CCAAAAGCGAGATGGACGAGCTGCTTGCTGGAAGCACCAGAGGTGACGGC
AAAGAGTCGCCAACAGCAGCGAATGGTTAG
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