mRNA_Ecto-sp9_F_contig1061.557.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig1061.557.1
Unique NamemRNA_Ecto-sp9_F_contig1061.557.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig1061.557.1 vs.
Match: Folate/biopterin (transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI15_ECTSI)

HSP 1 Score: 746 bits (1925), Expect = 2.880e-268
Identity = 372/392 (94.90%), Postives = 381/392 (97.19%), Query Frame = 1
Query:    1 MSRRPSVETGVRSNGSGSG--GGRAAENGERTPLLFGDEAADHDLDQDDQAPLLSSGGRDPQKRRPSLPALKKLDPYPGGGLGARTANAMVRARDRLVETLCCSPVQRWIDRHRDRDEELNIYSLASLAIVMSYFSIGVALELLYTPIAYYLIDDLGAESGVYTVWVILVTLPWSFKAAYGFLSDCVPIRGLKRKPYMFIGWGIHIVSNSALAIMGTPGEDAVVILSFLSACGYLLSDVMTDAIVVEKTQRESMSNMGNIQASGYIARYFGSAIGAVGGAVLYNKDTWGWGLTISELFWINALVPLVLVLPLMPFLLEDKKPRETGVLKRHSDELWTLVQKNAVWRPMIFVYLYNALMLPNGAWTNYLVETLDFSDWDIGVVNICSQVCFYV 1170
            MSRRPSVETGVRSNGSG    GGRAAENGERTPLLF DEAADHDLDQDD+A LLSSGGRDPQKRRPSLPALKKLDPYPG GLGARTANAMVRARD+LVETLCCSPVQRWIDRHR+RDEELNIYSLASLAIVMSYFSIGVALELLYTPIAYYLIDDLGAESGVYTVWVILVTLPWSFKAAYGFLSDCVPIRGLKRKPYM IGWG+HI+SNSALAIMGTPGEDAVVILSFLSACGYLLSDVMTDAIVVEKTQRESMSNMGNIQASGYIARYFGSAIGAVGGAVLYNKDTWGWGLTISELFWINALVPLVLV+PLMPFLLEDKKPRE GVLKRHSDELWTLVQK AVWRPMIFVYLYNALMLPNGAWTNYLVETLDFSDWDIGVVNICSQ+C ++
Sbjct:    1 MSRRPSVETGVRSNGSGXXXXGGRAAENGERTPLLFDDEAADHDLDQDDRASLLSSGGRDPQKRRPSLPALKKLDPYPGDGLGARTANAMVRARDQLVETLCCSPVQRWIDRHRNRDEELNIYSLASLAIVMSYFSIGVALELLYTPIAYYLIDDLGAESGVYTVWVILVTLPWSFKAAYGFLSDCVPIRGLKRKPYMLIGWGVHILSNSALAIMGTPGEDAVVILSFLSACGYLLSDVMTDAIVVEKTQRESMSNMGNIQASGYIARYFGSAIGAVGGAVLYNKDTWGWGLTISELFWINALVPLVLVMPLMPFLLEDKKPREKGVLKRHSDELWTLVQKTAVWRPMIFVYLYNALMLPNGAWTNYLVETLDFSDWDIGVVNICSQICAWL 392          
BLAST of mRNA_Ecto-sp9_F_contig1061.557.1 vs.
Match: Folate/biopterin (transporter n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTY0_9STRA)

HSP 1 Score: 293 bits (751), Expect = 5.800e-91
Identity = 142/287 (49.48%), Postives = 194/287 (67.60%), Query Frame = 1
Query:  307 PVQRWIDRHRDRDEELNIYSLASLAIVMSYFSIGVALELLYTPIAYYLIDDLGAESGVYTVWVILVTLPWSFKAAYGFLSDCVPIRGLKRKPYMFIGWGIHIVSNSALAIMGTPGEDAVVILSFLSACGYLLSDVMTDAIVVEKTQRESMSNMGNIQASGYIARYFGSAIGAVGGAVLYNKDTWGWGLTISELFWINALVPLVLVLPLMPFLLEDKK---PRETGVLKRHSDELWTLVQKNAVWRPMIFVYLYNALMLPNGAWTNYLVETLDFSDWDIGVVNICSQV 1158
            PV  W++         ++YSL SLAI+MSYFS+GV L     P+  YLI +LGA S  + V+ I+  LPWSFK  +GF+SD  PI G++R PY+ IGW +HI     LA +  P  + V+  +F++ACGYLLSDVMTD+I+VE+T+ ES  + G +QASGYIAR FGSA+G+  GA++YN+  WGWGL+I+++  INA+VPL  V P +P+L E  K   P    V + H  E+W LVQK  VW+PM FVY+YNA+M+PN AW N+L+E L FSD+ +G + I   V
Sbjct:   97 PVAAWVN---------DLYSLPSLAIIMSYFSVGVVLTFTTVPVTVYLIQELGASSTQFAVYTIVCKLPWSFKVFFGFISDAFPICGMRRLPYLVIGWTVHIACYVTLAFLVQPTVEWVIGAAFVAACGYLLSDVMTDSIMVERTKLESTKHRGTVQASGYIARAFGSAVGSTAGALVYNQANWGWGLSIAQIMLINAVVPLACVSPFIPYLKETVKTSLPTARHVWRTHWQEIWALVQKRVVWQPMTFVYIYNAMMIPNAAWNNFLIEGLKFSDFYLGAIAIAGSV 374          
BLAST of mRNA_Ecto-sp9_F_contig1061.557.1 vs.
Match: Hypothetical (protein n=3 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FNC7_9STRA)

HSP 1 Score: 273 bits (698), Expect = 4.120e-81
Identity = 135/268 (50.37%), Postives = 177/268 (66.04%), Query Frame = 1
Query:  355 NIYSLASLAIVMSYFSIGVALELLYTPIAYYLIDDLGAESGVYTVWVILVTLPWSFKAAYGFLSDCVPIRGLKRKPYMFIGWGIHIVSNSALAIMGTPGEDAVVILSFLSACGYLLSDVMTDAIVVEKTQRESMSNMGNIQASGYIARYFGSAIGAVGGAVLYNKDTWGWGLTISELFWINALVPLVLVLPLMPFLLEDKKPRETGVLKRHSDELWTLVQKNAVWRPMIFVYLYNALMLPNGAWTNYLVETLDFSDWDIGVVNICSQV 1158
            NI SL +LAI MSYF IGVAL+LL TP+  Y I+DLGA +    V   ++ +PW FK  YGFLSDCVPI GL+RKPY   GW +++V N  L +   P     + L FL   GY+L+DVMTDA++VE++  ES+ N G +Q+ GYI R+FGS IGA  GAV+YNKD W + L IS +F+INA  P++ +LPL+PFL+E +   E         +L+   Q  AVW+PM FVY+YNA+ L N AW N+LVE L FS W IG+V I   +
Sbjct:  292 NISSLPNLAIPMSYFCIGVALQLLRTPLIVYFIEDLGATAAEVNVLFTVMAVPWCFKVLYGFLSDCVPISGLRRKPYFMTGWVLYVVCNLILCVAQQPSIQMCIFLVFLQTAGYMLADVMTDALIVERSAYESLENRGQMQSKGYIVRFFGSVIGATIGAVVYNKDDWKFYLPISLVFFINAAFPMIFLLPLVPFLMEIETQCEPRNFVTQCKDLFHTAQLKAVWQPMTFVYIYNAMQLANAAWMNFLVEGLKFSAWMIGIVGIVGSI 559          
BLAST of mRNA_Ecto-sp9_F_contig1061.557.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1WMI5_HETAK)

HSP 1 Score: 263 bits (672), Expect = 1.010e-79
Identity = 126/265 (47.55%), Postives = 179/265 (67.55%), Query Frame = 1
Query:  370 ASLAIVMSYFSIGVALELLYTPIAYYLIDDLGAESGVYTVWVILVTLPWSFKAAYGFLSDCVPIRGLKRKPYMFIGWGIHIVSNSALAIMGTPGEDAVVILSFLSACGYLLSDVMTDAIVVEKTQRESMSNMGNIQASGYIARYFGSAIGAVGGAVLYNKDTWGWGLTISELFWINALVPLVLVLPLMPFLLE--DKKPRETGVLKRHSDELWTLVQKNAVWRPMIFVYLYNALMLPNGAWTNYLVETLDFSDWDIGVVNICSQV 1158
            A++AI +SYF +G AL  L TP+ YY++  L A     +V   + +LPWSFK AYGFLSDCVPIRG++RKPY  +GW I+++ +  LA +  P    +  L FL   GY+++DVMTDAIVVE++Q ES    G IQA GYI R+ GS +G+  GAVLYN+DTWGWGLT  ++F +NA VP V++ P M +L +  D KP    +  R   E+W  VQK  +W+PM F++ YN + +PN AW+++L++ L+FSD+ IGV+++   V
Sbjct:   64 ANVAIPLSYFCVGFALNFLSTPLTYYMVHVLDASPAQQSVVRTMQSLPWSFKLAYGFLSDCVPIRGMRRKPYFILGWTIYLLCHLTLAALIQPSIGPLTSLLFLGTVGYMMADVMTDAIVVERSQHESDDERGTIQAQGYIIRFVGSILGSAMGAVLYNRDTWGWGLTTPQMFALNAFVPFVVLYPAMAYLRDASDLKPIPVPIQCR---EIWGAVQKRNIWQPMAFIFAYNVMQIPNAAWSSFLIDGLNFSDFSIGVISVTGSV 325          
BLAST of mRNA_Ecto-sp9_F_contig1061.557.1 vs.
Match: Uncharacterized (protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K9Z9_FISSO)

HSP 1 Score: 263 bits (673), Expect = 3.840e-78
Identity = 134/269 (49.81%), Postives = 174/269 (64.68%), Query Frame = 1
Query:  364 SLASLAIVMSYFSIGVALELLYTPIAYYLIDDLGAESGVYTVWVILVTLPWSFKAAYGFLSDCVPIRGLKRKPYMFIGWGIHIVSNSALAIMGTPGEDAVVILSFLSACGYLLSDVMTDAIVVEKTQRESMSNMGNIQASGYIARYFGSAIGAVGGAVLYNKDTWGWGLTISELFWINALVPLVLVLPLMPFLLEDKKPRETGVLKRH----SDELWTLVQKNAVWRPMIFVYLYNALMLPNGAWTNYLVETLDFSDWDIGVVNICSQV 1158
            SL +LAI MSYF IGVAL+LL TP+  Y I+DL A      V   ++ +PW FK  YGFLSDC+PI GL+RKPY   GW + IVSN  L I   P     ++L F    GY+L+DVMTDA++VE+++ ES    G +Q+ GYI R+FGS +GA  GA++YNKD W W L I  +F+INA  PL+ +LP +P+LLE     ET  L ++      EL+   Q  AVW+PM FVY+YNAL L N AW N+LVE L FS W IG+V+I   +
Sbjct:  211 SLPNLAIPMSYFCIGVALQLLRTPLIVYFIEDLNATPAEVNVLFTVMAVPWCFKVIYGFLSDCLPISGLRRKPYFMTGWVVFIVSNLILMINPIPSIPVCILLVFTQTAGYMLADVMTDALIVERSRYESQEKRGTMQSKGYIVRFFGSTVGATIGALVYNKDDWDWSLPIRLIFFINAAFPLIFLLPFVPYLLE----LETDCLPKNFWDQCRELFHTAQLRAVWQPMTFVYVYNALQLTNAAWMNFLVEGLKFSAWQIGLVSIVGSI 475          
BLAST of mRNA_Ecto-sp9_F_contig1061.557.1 vs.
Match: Biopterin (transport-related protein BT1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8G1_9STRA)

HSP 1 Score: 237 bits (605), Expect = 2.380e-70
Identity = 114/272 (41.91%), Postives = 168/272 (61.76%), Query Frame = 1
Query:  355 NIYSLASLAIVMSYFSIGVALELLYTPIAYYLIDDLGAESGVYTVWVILVTLPWSFKAAYGFLSDCVPIRGLKRKPYMFIGWGIHIVSNSALAIMGTPGEDAVVILSFLSACGYLLSDVMTDAIVVEKTQRESMSNMGNIQASGYIARYFGSAIGAVGGAVLYNKDTWGWGLTISELFWINALVPLVLVLPLMPFLLEDKKPRETG----VLKRHSDELWTLVQKNAVWRPMIFVYLYNALMLPNGAWTNYLVETLDFSDWDIGVVNICSQV 1158
            +I++  + A+  SYF +G+A+  L TP++YYL+ +LGA      V V L  LPWSFK  YGF+SD  PI G++RKPY   GW I+ + N  LA  G PG  +V +L  L  CG+++SDV TDAI+VE+++ E     G++QA+GY  R+ GS +G+V G  +YNK+ WGWG+TI E+F +N L PL++V P M  L E       G     L+   D ++T +   +V+ PM  V+ YN   +PN AW ++LVE L F  +D+G++ I   +
Sbjct:    3 DIWAAPNRAVPASYFCVGIAMSFLRTPVSYYLVHELGASPSQQNVVVTLAMLPWSFKLVYGFISDNFPIGGMRRKPYFIAGWFIYSMCNLLLAATGRPGVQSVALLQLLGTCGFMMSDVTTDAIIVERSKNEPEETRGSMQATGYATRFCGSLLGSVLGTCVYNKERWGWGMTIGEVFLLNGLFPLLVVAPFMWTLRESAYVPRPGDRAAALRAQCDAIFTALSLRSVFVPMAVVFTYNLFQVPNAAWRSFLVEGLKFESFDLGLIGIVGSL 274          
BLAST of mRNA_Ecto-sp9_F_contig1061.557.1 vs.
Match: Folate (biopterin transporter n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKM6_9STRA)

HSP 1 Score: 241 bits (614), Expect = 3.260e-70
Identity = 110/269 (40.89%), Postives = 172/269 (63.94%), Query Frame = 1
Query:  352 LNIYSLASLAIVMSYFSIGVALELLYTPIAYYLIDDLGAESGVYTVWVILVTLPWSFKAAYGFLSDCVPIRGLKRKPYMFIGWGIHIVSNSALAIMGTPGEDAVVILSFLSACGYLLSDVMTDAIVVEKTQRESMSNMGNIQASGYIARYFGSAIGAVGGAVLYNKDTWGWGLTISELFWINALVPLVLVLPLMPFLLEDKKPRETGVLKRHSDELWTLVQKNAVWRPMIFVYLYNALMLPNGAWTNYLVETLDFSDWDIGVVNICSQV 1158
            +++YSL + A++MSY++IG A+    TP+  Y ++ L        +   ++ LPWSFK  YG LSDCVPI G +RKPY  IGW   +  N  LA +G P  +A++ + F S CGY+L+DVM DAI+VE+++ E    +G++Q+ GY+ARY G+ +GA  G +LYN+  W WGL+IS ++ +N L  +VLVLP    L +  +  E   LK    ++W +VQ+  ++ PM F+ +YN L++PN AW+N+L+  L F+ W +G++ I + V
Sbjct:  129 ISMYSLQNSALLMSYWTIGFAMTFTGTPLTAYAVNKLNVGPAQLNIAGTMLALPWSFKVLYGLLSDCVPIMGKRRKPYFVIGWSAFVAMNLGLASLGEPSLNALIGMGFFSVCGYMLADVMCDAIIVERSKLEPEGRVGHMQSVGYVARYVGNVVGATLGTILYNEKEWHWGLSISSIYLLNGLAAVVLVLPFTYHLSDPNQVLEARSLKEQLGDIWKMVQRRTIYVPMSFIAVYNMLLIPNAAWSNFLILGLKFTPWMLGIMFIVATV 397          
BLAST of mRNA_Ecto-sp9_F_contig1061.557.1 vs.
Match: Biopterin (transport-related protein BT1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1P4_ECTSI)

HSP 1 Score: 226 bits (577), Expect = 1.660e-65
Identity = 106/273 (38.83%), Postives = 177/273 (64.84%), Query Frame = 1
Query:  355 NIYSLASLAIVMSYFSIGVALELLYTPIAYYLIDDLGAESGVYTVWVILVTLPWSFKAAYGFLSDCVPIRGLKRKPYMFIGWGIHIVSNSALAIMGTPGEDAVVILSFLSACGYLLSDVMTDAIVVEKTQRESMSNMGNIQASGYIARYFGSAIGAVGGAVLYNKDTWGWGLTISELFWINALVPLVLVLPLMPFLLEDKKPRETGV-----LKRHSDELWTLVQKNAVWRPMIFVYLYNALMLPNGAWTNYLVETLDFSDWDIGVVNICSQV 1158
            NI+++ + A+VMSYF +G A+  L TPI+YY+++ +GA  G   + + L  LPWSFK  YGF+SD  PI G++RKPY  +GW +++++N  +A    P    + + S + + G++LSDV TDAI+VE+++ E     G++QA GY  R+ GS +G+  G +LYNKD WGWGL+I +LF++NA+ P++ + P +  L E     +  V     L++   E++  +++ AV+ PM  +++YN L +PN AW ++LV  L FS++++GV+ +   +
Sbjct:   69 NIWAVQNRAVVMSYFCVGFAIRFLTTPISYYMVNVIGASPGQQNIMLTLAQLPWSFKLVYGFISDNFPIGGMRRKPYFIMGWLVYVLTNLYVATKEVPSIQLLAVGSLIMSMGFMLSDVTTDAILVERSKHEPAETRGSMQAIGYSVRFVGSLLGSTMGLLLYNKDEWGWGLSIQQLFFLNAIFPVLFMGPWVWSLRETAVVTDGNVPIEQRLRQQCTEVFRALEQKAVYGPMGLIFIYNLLQVPNAAWRSFLVIGLSFSNFELGVLGVIGSL 341          
BLAST of mRNA_Ecto-sp9_F_contig1061.557.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H0Y7_9STRA)

HSP 1 Score: 224 bits (572), Expect = 3.690e-65
Identity = 110/265 (41.51%), Postives = 166/265 (62.64%), Query Frame = 1
Query:  355 NIYSLASLAIVMSYFSIGVALELLYTPIAYYLIDDLGAESGVYTVWVILVTLPWSFKAAYGFLSDCVPIRGLKRKPYMFIGWGIHIVSNSALAIMGTPGEDAVVILSFLSACGYLLSDVMTDAIVVEKTQRESMSNMGNIQASGYIARYFGSAIGAVGGAVLYNKDTWGWGLTISELFWINALVPLVLVLPLMPFLLEDKKPRETGVLKRHSD---ELWTLVQKNAVWRPMIFVYLYNALMLPNGAWTNYLVETLDFSDWDIGVV 1140
            N+Y   ++AI MSY+++G+AL  L TP++YYL+D+L A+S +   +  +  LPW  K  +G LSD  P+ G  R+P+ F+GWGI +VSN AL IMGTPG  A+++LSF    G LLSD + DA++VE T+ E+  N G ++  GY+ R  G  IG + G+ LYN+  WGWGL I + F   ALVP +    L PF  +  + +  G +K   D   E +  + K+AVW P +++YLYN   + N +W N+L + L F+D++ G++
Sbjct:   22 NLYWTGNMAIAMSYWNVGIALSFLSTPVSYYLVDNLEADSAMVNTYSAITYLPWCLKIFFGILSDVYPMFGWHRRPWFFLGWGIFMVSNLALTIMGTPGTSALLLLSFSQTMGLLLSDTVADAMIVEATEFEAEENKGRMRTQGYLIRSAGMIIGGLMGSCLYNQSEWGWGLDIGQCFMTQALVPFI---TLCPFWWKLHEIKYQGKIKGFGDMFEECFEFIVKDAVWVPCMYLYLYNFCSISNPSWVNFLFDGLGFTDFEYGML 283          
BLAST of mRNA_Ecto-sp9_F_contig1061.557.1 vs.
Match: Hypothetical (protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5H3_9STRA)

HSP 1 Score: 223 bits (567), Expect = 1.850e-63
Identity = 110/274 (40.15%), Postives = 168/274 (61.31%), Query Frame = 1
Query:  343 DEELNIYSLASLAIVMSYFSIGVALELLYTPIAYYLIDDLGAESGVYTVWVILVTLPWSFKAAYGFLSDCVPIRGLKRKPYMFIGWGIHIVSNSALAIMGTPGEDAVVILSFLSACGYLLSDVMTDAIVVEKTQRESMSNMGNIQASGYIARYFGSAIGAVGGAVLYNKDTWGWGLTISELFWINALVPLVLVLPLMPFLLEDKKPRETGV--LKRHSDELWTLVQKNAVWRPMIFVYLYNALMLPNGAWTNYLVETLDFSDWDIGVVNICSQV 1158
            + +L+++S+  LA+ M+YF IGV++  + TP+  Y++++LGAE        IL++LPWSFK  +GF+SD  PI G +RKPYM +G   H V+  +LA+MGTPG   +  L++++  G ++ DVM D +VVE+ + E  +  G  QA+ Y  R+ GS +GA  G V +N   WGWGLT  E+  I   +PL  V+PL  F + +K   E G   +     ++W  VQ  AVW+PM FVY YN L +PN AW+++L   LDF  W +G+++    +
Sbjct:  131 EAQLDLWSIEGLALPMAYFVIGVSVSFITTPLQVYMVEELGAEPEAQNTISILMSLPWSFKLLFGFVSDVNPILGWRRKPYMILGSMAHAVAYLSLALMGTPGIQVLSFLTWVATMGQIMVDVMADTLVVERAKFEPEATRGQTQATCYALRFVGSVLGASSGTVFFNAKAWGWGLTFGEVCLILGALPLFSVVPLA-FFVWEKPIHEKGCKSVVEQCQDIWETVQLKAVWKPMAFVYTYNILQIPNVAWSSFLQIGLDFKPWALGIMSTAGAI 403          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1061.557.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Folate/biopterin2.880e-26894.90transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D8... [more]
Folate/biopterin5.800e-9149.48transporter n=2 Tax=Tribonema minus TaxID=303371 R... [more]
Hypothetical4.120e-8150.37protein n=3 Tax=Corethron hystrix TaxID=216773 Rep... [more]
Hypothetical1.010e-7947.55protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
Uncharacterized3.840e-7849.81protein n=2 Tax=Fistulifera solaris TaxID=1519565 ... [more]
Biopterin2.380e-7041.91transport-related protein BT1 n=1 Tax=Tribonema mi... [more]
Folate3.260e-7040.89biopterin transporter n=2 Tax=Monodopsidaceae TaxI... [more]
Biopterin1.660e-6538.83transport-related protein BT1 n=2 Tax=Ectocarpus T... [more]
Hypothetical3.690e-6541.51protein n=1 Tax=Dictyocha speculum TaxID=35687 Rep... [more]
Hypothetical1.850e-6340.15protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1061contigEcto-sp9_F_contig1061:22131..26759 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score746.9
Seed ortholog evalue4.8e-213
Seed eggNOG ortholog2880.D8LI15
EggNOG free text desc.BT1 family
EggNOG OGs29S8M@1,2RXD7@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionfolate/biopterin transporter
Ec32 orthologEc-04_002850.1
Exons6
Model size1170
Cds size1170
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1061.557.1prot_Ecto-sp9_F_contig1061.557.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig1061 22131..26759 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928279.9682677-CDS-Ecto-sp9_F_contig1061:22130..224711622928279.9682677-CDS-Ecto-sp9_F_contig1061:22130..22471Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1061 22131..22471 +
1692277818.9439607-CDS-Ecto-sp9_F_contig1061:22130..224711692277818.9439607-CDS-Ecto-sp9_F_contig1061:22130..22471Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1061 22131..22471 +
1622928279.9887478-CDS-Ecto-sp9_F_contig1061:23504..236881622928279.9887478-CDS-Ecto-sp9_F_contig1061:23504..23688Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1061 23505..23688 +
1692277818.9543486-CDS-Ecto-sp9_F_contig1061:23504..236881692277818.9543486-CDS-Ecto-sp9_F_contig1061:23504..23688Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1061 23505..23688 +
1622928280.0008986-CDS-Ecto-sp9_F_contig1061:24806..250181622928280.0008986-CDS-Ecto-sp9_F_contig1061:24806..25018Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1061 24807..25018 +
1692277818.9637358-CDS-Ecto-sp9_F_contig1061:24806..250181692277818.9637358-CDS-Ecto-sp9_F_contig1061:24806..25018Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1061 24807..25018 +
1622928280.0162506-CDS-Ecto-sp9_F_contig1061:25383..255031622928280.0162506-CDS-Ecto-sp9_F_contig1061:25383..25503Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1061 25384..25503 +
1692277818.9730725-CDS-Ecto-sp9_F_contig1061:25383..255031692277818.9730725-CDS-Ecto-sp9_F_contig1061:25383..25503Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1061 25384..25503 +
1622928280.0325167-CDS-Ecto-sp9_F_contig1061:25703..259141622928280.0325167-CDS-Ecto-sp9_F_contig1061:25703..25914Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1061 25704..25914 +
1692277818.982427-CDS-Ecto-sp9_F_contig1061:25703..259141692277818.982427-CDS-Ecto-sp9_F_contig1061:25703..25914Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1061 25704..25914 +
1622928280.0521612-CDS-Ecto-sp9_F_contig1061:26657..267591622928280.0521612-CDS-Ecto-sp9_F_contig1061:26657..26759Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1061 26658..26759 +
1692277818.994366-CDS-Ecto-sp9_F_contig1061:26657..267591692277818.994366-CDS-Ecto-sp9_F_contig1061:26657..26759Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1061 26658..26759 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig1061.557.1

>prot_Ecto-sp9_F_contig1061.557.1 ID=prot_Ecto-sp9_F_contig1061.557.1|Name=mRNA_Ecto-sp9_F_contig1061.557.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=390bp
MSRRPSVETGVRSNGSGSGGGRAAENGERTPLLFGDEAADHDLDQDDQAP
LLSSGGRDPQKRRPSLPALKKLDPYPGGGLGARTANAMVRARDRLVETLC
CSPVQRWIDRHRDRDEELNIYSLASLAIVMSYFSIGVALELLYTPIAYYL
IDDLGAESGVYTVWVILVTLPWSFKAAYGFLSDCVPIRGLKRKPYMFIGW
GIHIVSNSALAIMGTPGEDAVVILSFLSACGYLLSDVMTDAIVVEKTQRE
SMSNMGNIQASGYIARYFGSAIGAVGGAVLYNKDTWGWGLTISELFWINA
LVPLVLVLPLMPFLLEDKKPRETGVLKRHSDELWTLVQKNAVWRPMIFVY
LYNALMLPNGAWTNYLVETLDFSDWDIGVVNICSQVCFYV
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mRNA from alignment at Ecto-sp9_F_contig1061:22131..26759+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig1061.557.1 ID=mRNA_Ecto-sp9_F_contig1061.557.1|Name=mRNA_Ecto-sp9_F_contig1061.557.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=4629bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1061:22131..26759+ (Ectocarpus species9 EcSCA_722f female)
ATGTCGCGAAGGCCTTCTGTCGAGACGGGCGTGAGGAGCAACGGCAGCGG CAGCGGCGGGGGAAGAGCAGCAGAAAACGGCGAGCGCACGCCGCTGCTCT TCGGCGACGAAGCCGCCGATCATGACCTCGACCAAGACGACCAAGCCCCG CTCCTGTCGTCCGGAGGACGAGACCCGCAGAAGCGACGCCCCTCCCTCCC CGCCCTCAAGAAGCTCGACCCCTACCCGGGGGGCGGGCTCGGGGCGAGGA CGGCGAACGCGATGGTGAGAGCCAGGGATCGGCTCGTGGAGACGCTCTGC TGCTCCCCGGTGCAGAGATGGATTGACCGCCACAGGGACAGGTGAACAAG GACGTTTGCACGCACTATGGTATCTACGACAGGCAGGCGGGGGTGGGGCG GTAAATATCAAATATCCGCGCGCCAGTGGGGGGGGGGGGGGGGCAAAAAA GAAAAGTTCTGTAGTTTGTCTCGGCGAAAATATTTTTCCAGGAGACACTT TTTGAGGGAAGAGAGGGCGGTGCACTCTTTCTCGCGTTACTTGTCGAAGG CGAGCACCTCAAGCGGGGTGGGTGGGTAGGGGGCCTCAGGTGGAGGAAAC CGTCTGTGTGACCGCGGATTGGACATAGCTCCTACCCACCCGGCAGAAGC GCTGTGAGTGCTGATTCGCTGATTCAAAAGTGATGAGAAACAAAAGAGTG AATGGGTATGCTTAGCACCAGCTGGTATCCCTGATATAAATCATCACCAG GAAAAATATGTCAAACCGTAAGTTAATAATTAATATTGGTTGCAAAGTAG AATTGATGCCGTGCGTTGCTGTGTGCGTCTGTACGCGCACTGCATCTCAT CCTCCTGTCTTGTCACTCTGCCCTCGTCTGTGAGTGGCGTACGTACGCGT GACGCGCGTGGCCTTTTCTTCGGTGGTCTGCTTCGCGTTCGGTCTGCTGT GCCTAGGGAGTTACAGCGGGCACGGTGCCGCGCAGAGGTGTCACGGCGGT GTAGCTGCTGCTGTACCCTCTCGTGGTCTGCAGCAATCGCTCAAGTTATC CATTTCTTTCTCCTGTACGCCTGCTGGACATTCTCCGCCCCCTCCGTTTT GTGTGTGTGTGTGTGTGTTTTTTTCTTACCGTTTTGTGTTTTTCCACGCC TGCTGCTGCTGCTGCTGTGGCGCGGTTACTCCGCATCATTCCCCCCCCCT CTGTTTGTTGTTTTTTCACAAAAATCACAGAAAATTAATCTCTCCCACAG AGAAGGATCCGGGATAGGTGCCTGTACGATGCTTTTACCGTCGCGCACCT CACCTCTCCACCCCCCCCCTGCCCCCGTCCGTGCGTCCTATTGGAAATAT GCACCCACCGCCGGAAAACGACAGAGATGAGGAGCTGAACATCTACAGCC TGGCGTCGCTGGCAATCGTCATGTCGTACTTCTCTATCGGGGTGGCTCTG GAGCTACTGTACACGCCCATCGCCTACTACCTCATCGACGACTTGGGGGC GGAGAGCGGGGTGTACACCGTGTGGGTTATCCTGGTGACCCTGCCCTGGA GTTTCAAGGTACAGCAGTAGTCATAGTCCCGAGAAACGATGGGGGGAGGG GGGGGTACTCATAGCCGTGCATGCCGCAGTCGTTAGACCATTGACCTTGC ATCCCGACAAAGCCAGGATGGAGCACGCTGGGTTGTCACCGGACCAGGCT AGCTCATCACCAAGGGGGGGTAGGCACATTCGCTGAGTGCGATGGAACAT TTGCCGCTGTAGAACATTTTTGCTGCAGCGGCAGCACGTGAGCCGCAGCA GTGGGGTCGTGCGTAAATATGCAAGCGGTACGCGTAAATGTAAATGTTAT CCCCCCCCCCCGGGAGTTCTCTGATGTGATTGTACTAGTAGTCATGGTGC TCTTGTTTTGTAACGTATTTTTTTTTCTCGTCCGCCGAGCCCCGGCAGAC CACCACCGCAAAAATATTTTTCACCAGCGCGCACTTGCTGTGTGTTCCAC TACGAACGTAGAAGCCTTGGTAGACCCGTGCATTTCTCTCCACCTGCTGC CGTTTCTGTCTTTGTCCGGAGAATAGAGAACTAGCCTAGCCTCTCTTCCT TAGCGCCCCCTCACGGGGGTCCCAGGTCATGGCCTTTAGAATCGCTTTCT GTTTTCAGCCGCGCTTGAGACTAACGTCTTTTCATTGGTCTGCCGGTGAG CGCGGTCGGTGCTGTTCATGAAGACACACACACAGAAACCGATTCGAAAG TACTGGTGTCGTTTTATCCCGCTTCAAGACTGACATATTTTCGTCGGTCA GCCGGTTAACTCCGTCGATGCTAATAAAAGACACACACCCACGATGCCCC CTCACAGGAGTCCCAGATCACGGCCTTTAGAAGAGGTTTCTGTTTTCAGC CGCACTTGAGACTAGCGTATTTTCATTGGTCAGCGCGGGGGAGCGCGGTC GGTGCTGTTCATTACGACACACACAGAACCCTTTGATTAGAAAGTGTTGG GTGTTTTTATCCGCTACAAAACCATTCCCCGAAAAGACTTCAACCCATCC CCTTCACCACTACGTTGTATGTTGAACAGGTGGTCTCTCTTTGTATGTAT GTTTCCCGAAAAGACTGGCGTCTTTTCAGTTCGTCAGCCGGTTATGCTAA CAATACAGACACCCACACACACGCAGGCGGCCTACGGGTTCCTCTCGGAC TGCGTGCCCATCCGCGGCCTGAAGCGCAAGCCGTACATGTTCATCGGGTG GGGTATCCACATTGTGAGCAACTCCGCCCTGGCCATCATGGGCACCCCAG GGGAAGACGCGGTCGTGATCCTCTCCTTCCTGTCGGCGTGTGGCTACCTC CTAAGTGACGTCATGACGGACGCGATCGTCGTGGAAAAGTGAGTGTCGCT TCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGTGGGCCTTGTGAGGGT GCCGGTAGTCTTGTCGTTGGTGATGGTCTTGGTCTCTCCGTACCTCTTGG TTCCGGTACTGTGAAGCAAAGCGCAGTGAAATTGCAGCGCTCTTCGCGGA CCGAATTGTAATTGTTTTGCTGTTGCATGTTTGTAACCAAAGCCCGCGCG CTTGCGCCTTTCTTCTCTAGGTAAACAGACCTGGGCAAAATGTGTGCTTG CTGATTTTTGGACCCGCGCTGTTCTCGCATTACTGCTGTGCCGTCGATGG GCATTGAACATCCATTCCCCCCCCGCCCTCGTACTTGCGAAACTTGCGTG CAGAACCCAGCGAGAGTCCATGTCTAACATGGGAAACATCCAAGCGAGCG GTTACATAGCCCGGTATTTCGGATCGGCCATCGGGGCGGTAGGAGGCGCG GTCCTCTACAACAAGGATACGTGGTGAGTGCGTCTACAGATGCTTGCTGC ATCTGTCTTTGCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTATCTCGC TCTCCCTCCTTCCCTCGCTCTCTCGCTCTCTCGCTCTCTCTCACGCATGC CACACACGCACTCTTGGTCCAAATCCCTGTCGTACCTTGCACCCAAACAC ACGCGTGTCTCTTTGTCGGGCAGGGGATGGGGGCTGACCATCTCCGAGCT CTTCTGGATCAACGCTTTGGTGCCTCTGGTTCTGGTCCTGCCGCTGATGC CCTTCCTTCTCGAGGACAAGAAGCCTAGGGAGACGGGCGTCTTGAAGCGA CACAGCGACGAGCTGTGGACCCTGGTTCAGAAGAACGCGGTGTGGAGACC GATGATCTTCGTTTACCTCTACAACGCCCTCATGGTGAGTGTCGCGACTG CTAATGTTGTCGGTCTTGGGTGTCTTTGCTTGTTGTTTGGCTGCTAATGT TGTCGATCTTGAGGTATGTTGTTGGTGTTGGTGTTGTTGTTGTATAGCTG CTACCGTTGACATTGTTGCTGCTGTTGCGACAGAAGGCGGTCCATAAGCC CATGATCGATTTCCGTGTACCGTACCGGTGGTACGTTTAGTCGTCGGTGT GGCTGTTGTTACCGTAGAGTCGTATTGGTCTTTTCGCCGCGGTACGTGCA TGCATAGGAGGCTGGTAAAGGTGCATTTCTCGCCCTCTTCTTGGCTGGCT TGACCGCTAGCCTATCGTCACGACGGAGTTAGCGTTGCTGGCGTGGTCAT TGTTTGGAACTCCATGGGAGATTGCAACTCGCGCTTTCCGGTCTCTTGGT ACTATCAGAGCTGATGATGGCCTCTCACAACCTCCTTATGCCGCCCTTGC TCTTCGCCCTGTGTGTCTGTCTCACGACCGAACTCAGCCCCCAATGTCTC AATGAAACCACTCCTCTTTTTTTCTTTTTGCATCTCTTCACCTTGACGTA TCGTGCCTCACGATACTACGGCCTTTAGAGGTGGAGATGCCACCCTCCAA TCGTTTCGTGCTTTTTTTCGTTTCACAGCCCACAAGAAACCCGATCAAAC AGAACGTGTGTCCACCGCTCTACAACCGTCTCTCCTGGCCTTTTTTGTCT TGCCTCCTGCCGCTGCTGCATTCACAGCTTCCGAACGGTGCTTGGACCAA CTACCTCGTAGAGACGTTGGACTTTTCGGACTGGGACATCGGCGTGGTTA ACATCTGTTCCCAGGTATGTTTTTATGTT
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1061:22131..26759+

>mRNA_Ecto-sp9_F_contig1061.557.1 ID=mRNA_Ecto-sp9_F_contig1061.557.1|Name=mRNA_Ecto-sp9_F_contig1061.557.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2340bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1061:22131..26759+ (Ectocarpus species9 EcSCA_722f female)
ATGTCGCGAAGGCCTTCTGTCGAGACGGGCGTGAGGAGCAACGGCAGCGG
CAGCGGCGGGGGAAGAGCAGCAGAAAACGGCGAGCGCACGCCGCTGCTCT
TCGGCGACGAAGCCGCCGATCATGACCTCGACCAAGACGACCAAGCCCCG
CTCCTGTCGTCCGGAGGACGAGACCCGCAGAAGCGACGCCCCTCCCTCCC
CGCCCTCAAGAAGCTCGACCCCTACCCGGGGGGCGGGCTCGGGGCGAGGA
CGGCGAACGCGATGGTGAGAGCCAGGGATCGGCTCGTGGAGACGCTCTGC
TGCTCCCCGGTGCAGAGATGGATTGACCGCCACAGGGACAGATGTCGCGA
AGGCCTTCTGTCGAGACGGGCGTGAGGAGCAACGGCAGCGGCAGCGGCGG
GGGAAGAGCAGCAGAAAACGGCGAGCGCACGCCGCTGCTCTTCGGCGACG
AAGCCGCCGATCATGACCTCGACCAAGACGACCAAGCCCCGCTCCTGTCG
TCCGGAGGACGAGACCCGCAGAAGCGACGCCCCTCCCTCCCCGCCCTCAA
GAAGCTCGACCCCTACCCGGGGGGCGGGCTCGGGGCGAGGACGGCGAACG
CGATGGTGAGAGCCAGGGATCGGCTCGTGGAGACGCTCTGCTGCTCCCCG
GTGCAGAGATGGATTGACCGCCACAGGGACAGAGATGAGGAGCTGAACAT
CTACAGCCTGGCGTCGCTGGCAATCGTCATGTCGTACTTCTCTATCGGGG
TGGCTCTGGAGCTACTGTACACGCCCATCGCCTACTACCTCATCGACGAC
TTGGGGGCGGAGAGCGGGGTGTACACCGTGTGGGTTATCCTGGTGACCCT
GCCCTGGAGTTTCAAGAGATGAGGAGCTGAACATCTACAGCCTGGCGTCG
CTGGCAATCGTCATGTCGTACTTCTCTATCGGGGTGGCTCTGGAGCTACT
GTACACGCCCATCGCCTACTACCTCATCGACGACTTGGGGGCGGAGAGCG
GGGTGTACACCGTGTGGGTTATCCTGGTGACCCTGCCCTGGAGTTTCAAG
GCGGCCTACGGGTTCCTCTCGGACTGCGTGCCCATCCGCGGCCTGAAGCG
CAAGCCGTACATGTTCATCGGGTGGGGTATCCACATTGTGAGCAACTCCG
CCCTGGCCATCATGGGCACCCCAGGGGAAGACGCGGTCGTGATCCTCTCC
TTCCTGTCGGCGTGTGGCTACCTCCTAAGTGACGTCATGACGGACGCGAT
CGTCGTGGAAAAGCGGCCTACGGGTTCCTCTCGGACTGCGTGCCCATCCG
CGGCCTGAAGCGCAAGCCGTACATGTTCATCGGGTGGGGTATCCACATTG
TGAGCAACTCCGCCCTGGCCATCATGGGCACCCCAGGGGAAGACGCGGTC
GTGATCCTCTCCTTCCTGTCGGCGTGTGGCTACCTCCTAAGTGACGTCAT
GACGGACGCGATCGTCGTGGAAAAAACCCAGCGAGAGTCCATGTCTAACA
TGGGAAACATCCAAGCGAGCGGTTACATAGCCCGGTATTTCGGATCGGCC
ATCGGGGCGGTAGGAGGCGCGGTCCTCTACAACAAGGATACGTGAACCCA
GCGAGAGTCCATGTCTAACATGGGAAACATCCAAGCGAGCGGTTACATAG
CCCGGTATTTCGGATCGGCCATCGGGGCGGTAGGAGGCGCGGTCCTCTAC
AACAAGGATACGTGGGGATGGGGGCTGACCATCTCCGAGCTCTTCTGGAT
CAACGCTTTGGTGCCTCTGGTTCTGGTCCTGCCGCTGATGCCCTTCCTTC
TCGAGGACAAGAAGCCTAGGGAGACGGGCGTCTTGAAGCGACACAGCGAC
GAGCTGTGGACCCTGGTTCAGAAGAACGCGGTGTGGAGACCGATGATCTT
CGTTTACCTCTACAACGCCCTCATGGGGATGGGGGCTGACCATCTCCGAG
CTCTTCTGGATCAACGCTTTGGTGCCTCTGGTTCTGGTCCTGCCGCTGAT
GCCCTTCCTTCTCGAGGACAAGAAGCCTAGGGAGACGGGCGTCTTGAAGC
GACACAGCGACGAGCTGTGGACCCTGGTTCAGAAGAACGCGGTGTGGAGA
CCGATGATCTTCGTTTACCTCTACAACGCCCTCATGCTTCCGAACGGTGC
TTGGACCAACTACCTCGTAGAGACGTTGGACTTTTCGGACTGGGACATCG
GCGTGGTTAACATCTGTTCCCAGGTATGTTTTTATGTTCTTCCGAACGGT
GCTTGGACCAACTACCTCGTAGAGACGTTGGACTTTTCGGACTGGGACAT
CGGCGTGGTTAACATCTGTTCCCAGGTATGTTTTTATGTT
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