mRNA_Ecto-sp9_F_contig1061.557.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig1061.557.1 vs.
Match: Folate/biopterin (transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI15_ECTSI) HSP 1 Score: 746 bits (1925), Expect = 2.880e-268 Identity = 372/392 (94.90%), Postives = 381/392 (97.19%), Query Frame = 1
Query: 1 MSRRPSVETGVRSNGSGSG--GGRAAENGERTPLLFGDEAADHDLDQDDQAPLLSSGGRDPQKRRPSLPALKKLDPYPGGGLGARTANAMVRARDRLVETLCCSPVQRWIDRHRDRDEELNIYSLASLAIVMSYFSIGVALELLYTPIAYYLIDDLGAESGVYTVWVILVTLPWSFKAAYGFLSDCVPIRGLKRKPYMFIGWGIHIVSNSALAIMGTPGEDAVVILSFLSACGYLLSDVMTDAIVVEKTQRESMSNMGNIQASGYIARYFGSAIGAVGGAVLYNKDTWGWGLTISELFWINALVPLVLVLPLMPFLLEDKKPRETGVLKRHSDELWTLVQKNAVWRPMIFVYLYNALMLPNGAWTNYLVETLDFSDWDIGVVNICSQVCFYV 1170
MSRRPSVETGVRSNGSG GGRAAENGERTPLLF DEAADHDLDQDD+A LLSSGGRDPQKRRPSLPALKKLDPYPG GLGARTANAMVRARD+LVETLCCSPVQRWIDRHR+RDEELNIYSLASLAIVMSYFSIGVALELLYTPIAYYLIDDLGAESGVYTVWVILVTLPWSFKAAYGFLSDCVPIRGLKRKPYM IGWG+HI+SNSALAIMGTPGEDAVVILSFLSACGYLLSDVMTDAIVVEKTQRESMSNMGNIQASGYIARYFGSAIGAVGGAVLYNKDTWGWGLTISELFWINALVPLVLV+PLMPFLLEDKKPRE GVLKRHSDELWTLVQK AVWRPMIFVYLYNALMLPNGAWTNYLVETLDFSDWDIGVVNICSQ+C ++
Sbjct: 1 MSRRPSVETGVRSNGSGXXXXGGRAAENGERTPLLFDDEAADHDLDQDDRASLLSSGGRDPQKRRPSLPALKKLDPYPGDGLGARTANAMVRARDQLVETLCCSPVQRWIDRHRNRDEELNIYSLASLAIVMSYFSIGVALELLYTPIAYYLIDDLGAESGVYTVWVILVTLPWSFKAAYGFLSDCVPIRGLKRKPYMLIGWGVHILSNSALAIMGTPGEDAVVILSFLSACGYLLSDVMTDAIVVEKTQRESMSNMGNIQASGYIARYFGSAIGAVGGAVLYNKDTWGWGLTISELFWINALVPLVLVMPLMPFLLEDKKPREKGVLKRHSDELWTLVQKTAVWRPMIFVYLYNALMLPNGAWTNYLVETLDFSDWDIGVVNICSQICAWL 392
BLAST of mRNA_Ecto-sp9_F_contig1061.557.1 vs.
Match: Folate/biopterin (transporter n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTY0_9STRA) HSP 1 Score: 293 bits (751), Expect = 5.800e-91 Identity = 142/287 (49.48%), Postives = 194/287 (67.60%), Query Frame = 1
Query: 307 PVQRWIDRHRDRDEELNIYSLASLAIVMSYFSIGVALELLYTPIAYYLIDDLGAESGVYTVWVILVTLPWSFKAAYGFLSDCVPIRGLKRKPYMFIGWGIHIVSNSALAIMGTPGEDAVVILSFLSACGYLLSDVMTDAIVVEKTQRESMSNMGNIQASGYIARYFGSAIGAVGGAVLYNKDTWGWGLTISELFWINALVPLVLVLPLMPFLLEDKK---PRETGVLKRHSDELWTLVQKNAVWRPMIFVYLYNALMLPNGAWTNYLVETLDFSDWDIGVVNICSQV 1158
PV W++ ++YSL SLAI+MSYFS+GV L P+ YLI +LGA S + V+ I+ LPWSFK +GF+SD PI G++R PY+ IGW +HI LA + P + V+ +F++ACGYLLSDVMTD+I+VE+T+ ES + G +QASGYIAR FGSA+G+ GA++YN+ WGWGL+I+++ INA+VPL V P +P+L E K P V + H E+W LVQK VW+PM FVY+YNA+M+PN AW N+L+E L FSD+ +G + I V
Sbjct: 97 PVAAWVN---------DLYSLPSLAIIMSYFSVGVVLTFTTVPVTVYLIQELGASSTQFAVYTIVCKLPWSFKVFFGFISDAFPICGMRRLPYLVIGWTVHIACYVTLAFLVQPTVEWVIGAAFVAACGYLLSDVMTDSIMVERTKLESTKHRGTVQASGYIARAFGSAVGSTAGALVYNQANWGWGLSIAQIMLINAVVPLACVSPFIPYLKETVKTSLPTARHVWRTHWQEIWALVQKRVVWQPMTFVYIYNAMMIPNAAWNNFLIEGLKFSDFYLGAIAIAGSV 374
BLAST of mRNA_Ecto-sp9_F_contig1061.557.1 vs.
Match: Hypothetical (protein n=3 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FNC7_9STRA) HSP 1 Score: 273 bits (698), Expect = 4.120e-81 Identity = 135/268 (50.37%), Postives = 177/268 (66.04%), Query Frame = 1
Query: 355 NIYSLASLAIVMSYFSIGVALELLYTPIAYYLIDDLGAESGVYTVWVILVTLPWSFKAAYGFLSDCVPIRGLKRKPYMFIGWGIHIVSNSALAIMGTPGEDAVVILSFLSACGYLLSDVMTDAIVVEKTQRESMSNMGNIQASGYIARYFGSAIGAVGGAVLYNKDTWGWGLTISELFWINALVPLVLVLPLMPFLLEDKKPRETGVLKRHSDELWTLVQKNAVWRPMIFVYLYNALMLPNGAWTNYLVETLDFSDWDIGVVNICSQV 1158
NI SL +LAI MSYF IGVAL+LL TP+ Y I+DLGA + V ++ +PW FK YGFLSDCVPI GL+RKPY GW +++V N L + P + L FL GY+L+DVMTDA++VE++ ES+ N G +Q+ GYI R+FGS IGA GAV+YNKD W + L IS +F+INA P++ +LPL+PFL+E + E +L+ Q AVW+PM FVY+YNA+ L N AW N+LVE L FS W IG+V I +
Sbjct: 292 NISSLPNLAIPMSYFCIGVALQLLRTPLIVYFIEDLGATAAEVNVLFTVMAVPWCFKVLYGFLSDCVPISGLRRKPYFMTGWVLYVVCNLILCVAQQPSIQMCIFLVFLQTAGYMLADVMTDALIVERSAYESLENRGQMQSKGYIVRFFGSVIGATIGAVVYNKDDWKFYLPISLVFFINAAFPMIFLLPLVPFLMEIETQCEPRNFVTQCKDLFHTAQLKAVWQPMTFVYIYNAMQLANAAWMNFLVEGLKFSAWMIGIVGIVGSI 559
BLAST of mRNA_Ecto-sp9_F_contig1061.557.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1WMI5_HETAK) HSP 1 Score: 263 bits (672), Expect = 1.010e-79 Identity = 126/265 (47.55%), Postives = 179/265 (67.55%), Query Frame = 1
Query: 370 ASLAIVMSYFSIGVALELLYTPIAYYLIDDLGAESGVYTVWVILVTLPWSFKAAYGFLSDCVPIRGLKRKPYMFIGWGIHIVSNSALAIMGTPGEDAVVILSFLSACGYLLSDVMTDAIVVEKTQRESMSNMGNIQASGYIARYFGSAIGAVGGAVLYNKDTWGWGLTISELFWINALVPLVLVLPLMPFLLE--DKKPRETGVLKRHSDELWTLVQKNAVWRPMIFVYLYNALMLPNGAWTNYLVETLDFSDWDIGVVNICSQV 1158
A++AI +SYF +G AL L TP+ YY++ L A +V + +LPWSFK AYGFLSDCVPIRG++RKPY +GW I+++ + LA + P + L FL GY+++DVMTDAIVVE++Q ES G IQA GYI R+ GS +G+ GAVLYN+DTWGWGLT ++F +NA VP V++ P M +L + D KP + R E+W VQK +W+PM F++ YN + +PN AW+++L++ L+FSD+ IGV+++ V
Sbjct: 64 ANVAIPLSYFCVGFALNFLSTPLTYYMVHVLDASPAQQSVVRTMQSLPWSFKLAYGFLSDCVPIRGMRRKPYFILGWTIYLLCHLTLAALIQPSIGPLTSLLFLGTVGYMMADVMTDAIVVERSQHESDDERGTIQAQGYIIRFVGSILGSAMGAVLYNRDTWGWGLTTPQMFALNAFVPFVVLYPAMAYLRDASDLKPIPVPIQCR---EIWGAVQKRNIWQPMAFIFAYNVMQIPNAAWSSFLIDGLNFSDFSIGVISVTGSV 325
BLAST of mRNA_Ecto-sp9_F_contig1061.557.1 vs.
Match: Uncharacterized (protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K9Z9_FISSO) HSP 1 Score: 263 bits (673), Expect = 3.840e-78 Identity = 134/269 (49.81%), Postives = 174/269 (64.68%), Query Frame = 1
Query: 364 SLASLAIVMSYFSIGVALELLYTPIAYYLIDDLGAESGVYTVWVILVTLPWSFKAAYGFLSDCVPIRGLKRKPYMFIGWGIHIVSNSALAIMGTPGEDAVVILSFLSACGYLLSDVMTDAIVVEKTQRESMSNMGNIQASGYIARYFGSAIGAVGGAVLYNKDTWGWGLTISELFWINALVPLVLVLPLMPFLLEDKKPRETGVLKRH----SDELWTLVQKNAVWRPMIFVYLYNALMLPNGAWTNYLVETLDFSDWDIGVVNICSQV 1158
SL +LAI MSYF IGVAL+LL TP+ Y I+DL A V ++ +PW FK YGFLSDC+PI GL+RKPY GW + IVSN L I P ++L F GY+L+DVMTDA++VE+++ ES G +Q+ GYI R+FGS +GA GA++YNKD W W L I +F+INA PL+ +LP +P+LLE ET L ++ EL+ Q AVW+PM FVY+YNAL L N AW N+LVE L FS W IG+V+I +
Sbjct: 211 SLPNLAIPMSYFCIGVALQLLRTPLIVYFIEDLNATPAEVNVLFTVMAVPWCFKVIYGFLSDCLPISGLRRKPYFMTGWVVFIVSNLILMINPIPSIPVCILLVFTQTAGYMLADVMTDALIVERSRYESQEKRGTMQSKGYIVRFFGSTVGATIGALVYNKDDWDWSLPIRLIFFINAAFPLIFLLPFVPYLLE----LETDCLPKNFWDQCRELFHTAQLRAVWQPMTFVYVYNALQLTNAAWMNFLVEGLKFSAWQIGLVSIVGSI 475
BLAST of mRNA_Ecto-sp9_F_contig1061.557.1 vs.
Match: Biopterin (transport-related protein BT1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8G1_9STRA) HSP 1 Score: 237 bits (605), Expect = 2.380e-70 Identity = 114/272 (41.91%), Postives = 168/272 (61.76%), Query Frame = 1
Query: 355 NIYSLASLAIVMSYFSIGVALELLYTPIAYYLIDDLGAESGVYTVWVILVTLPWSFKAAYGFLSDCVPIRGLKRKPYMFIGWGIHIVSNSALAIMGTPGEDAVVILSFLSACGYLLSDVMTDAIVVEKTQRESMSNMGNIQASGYIARYFGSAIGAVGGAVLYNKDTWGWGLTISELFWINALVPLVLVLPLMPFLLEDKKPRETG----VLKRHSDELWTLVQKNAVWRPMIFVYLYNALMLPNGAWTNYLVETLDFSDWDIGVVNICSQV 1158
+I++ + A+ SYF +G+A+ L TP++YYL+ +LGA V V L LPWSFK YGF+SD PI G++RKPY GW I+ + N LA G PG +V +L L CG+++SDV TDAI+VE+++ E G++QA+GY R+ GS +G+V G +YNK+ WGWG+TI E+F +N L PL++V P M L E G L+ D ++T + +V+ PM V+ YN +PN AW ++LVE L F +D+G++ I +
Sbjct: 3 DIWAAPNRAVPASYFCVGIAMSFLRTPVSYYLVHELGASPSQQNVVVTLAMLPWSFKLVYGFISDNFPIGGMRRKPYFIAGWFIYSMCNLLLAATGRPGVQSVALLQLLGTCGFMMSDVTTDAIIVERSKNEPEETRGSMQATGYATRFCGSLLGSVLGTCVYNKERWGWGMTIGEVFLLNGLFPLLVVAPFMWTLRESAYVPRPGDRAAALRAQCDAIFTALSLRSVFVPMAVVFTYNLFQVPNAAWRSFLVEGLKFESFDLGLIGIVGSL 274
BLAST of mRNA_Ecto-sp9_F_contig1061.557.1 vs.
Match: Folate (biopterin transporter n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKM6_9STRA) HSP 1 Score: 241 bits (614), Expect = 3.260e-70 Identity = 110/269 (40.89%), Postives = 172/269 (63.94%), Query Frame = 1
Query: 352 LNIYSLASLAIVMSYFSIGVALELLYTPIAYYLIDDLGAESGVYTVWVILVTLPWSFKAAYGFLSDCVPIRGLKRKPYMFIGWGIHIVSNSALAIMGTPGEDAVVILSFLSACGYLLSDVMTDAIVVEKTQRESMSNMGNIQASGYIARYFGSAIGAVGGAVLYNKDTWGWGLTISELFWINALVPLVLVLPLMPFLLEDKKPRETGVLKRHSDELWTLVQKNAVWRPMIFVYLYNALMLPNGAWTNYLVETLDFSDWDIGVVNICSQV 1158
+++YSL + A++MSY++IG A+ TP+ Y ++ L + ++ LPWSFK YG LSDCVPI G +RKPY IGW + N LA +G P +A++ + F S CGY+L+DVM DAI+VE+++ E +G++Q+ GY+ARY G+ +GA G +LYN+ W WGL+IS ++ +N L +VLVLP L + + E LK ++W +VQ+ ++ PM F+ +YN L++PN AW+N+L+ L F+ W +G++ I + V
Sbjct: 129 ISMYSLQNSALLMSYWTIGFAMTFTGTPLTAYAVNKLNVGPAQLNIAGTMLALPWSFKVLYGLLSDCVPIMGKRRKPYFVIGWSAFVAMNLGLASLGEPSLNALIGMGFFSVCGYMLADVMCDAIIVERSKLEPEGRVGHMQSVGYVARYVGNVVGATLGTILYNEKEWHWGLSISSIYLLNGLAAVVLVLPFTYHLSDPNQVLEARSLKEQLGDIWKMVQRRTIYVPMSFIAVYNMLLIPNAAWSNFLILGLKFTPWMLGIMFIVATV 397
BLAST of mRNA_Ecto-sp9_F_contig1061.557.1 vs.
Match: Biopterin (transport-related protein BT1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1P4_ECTSI) HSP 1 Score: 226 bits (577), Expect = 1.660e-65 Identity = 106/273 (38.83%), Postives = 177/273 (64.84%), Query Frame = 1
Query: 355 NIYSLASLAIVMSYFSIGVALELLYTPIAYYLIDDLGAESGVYTVWVILVTLPWSFKAAYGFLSDCVPIRGLKRKPYMFIGWGIHIVSNSALAIMGTPGEDAVVILSFLSACGYLLSDVMTDAIVVEKTQRESMSNMGNIQASGYIARYFGSAIGAVGGAVLYNKDTWGWGLTISELFWINALVPLVLVLPLMPFLLEDKKPRETGV-----LKRHSDELWTLVQKNAVWRPMIFVYLYNALMLPNGAWTNYLVETLDFSDWDIGVVNICSQV 1158
NI+++ + A+VMSYF +G A+ L TPI+YY+++ +GA G + + L LPWSFK YGF+SD PI G++RKPY +GW +++++N +A P + + S + + G++LSDV TDAI+VE+++ E G++QA GY R+ GS +G+ G +LYNKD WGWGL+I +LF++NA+ P++ + P + L E + V L++ E++ +++ AV+ PM +++YN L +PN AW ++LV L FS++++GV+ + +
Sbjct: 69 NIWAVQNRAVVMSYFCVGFAIRFLTTPISYYMVNVIGASPGQQNIMLTLAQLPWSFKLVYGFISDNFPIGGMRRKPYFIMGWLVYVLTNLYVATKEVPSIQLLAVGSLIMSMGFMLSDVTTDAILVERSKHEPAETRGSMQAIGYSVRFVGSLLGSTMGLLLYNKDEWGWGLSIQQLFFLNAIFPVLFMGPWVWSLRETAVVTDGNVPIEQRLRQQCTEVFRALEQKAVYGPMGLIFIYNLLQVPNAAWRSFLVIGLSFSNFELGVLGVIGSL 341
BLAST of mRNA_Ecto-sp9_F_contig1061.557.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H0Y7_9STRA) HSP 1 Score: 224 bits (572), Expect = 3.690e-65 Identity = 110/265 (41.51%), Postives = 166/265 (62.64%), Query Frame = 1
Query: 355 NIYSLASLAIVMSYFSIGVALELLYTPIAYYLIDDLGAESGVYTVWVILVTLPWSFKAAYGFLSDCVPIRGLKRKPYMFIGWGIHIVSNSALAIMGTPGEDAVVILSFLSACGYLLSDVMTDAIVVEKTQRESMSNMGNIQASGYIARYFGSAIGAVGGAVLYNKDTWGWGLTISELFWINALVPLVLVLPLMPFLLEDKKPRETGVLKRHSD---ELWTLVQKNAVWRPMIFVYLYNALMLPNGAWTNYLVETLDFSDWDIGVV 1140
N+Y ++AI MSY+++G+AL L TP++YYL+D+L A+S + + + LPW K +G LSD P+ G R+P+ F+GWGI +VSN AL IMGTPG A+++LSF G LLSD + DA++VE T+ E+ N G ++ GY+ R G IG + G+ LYN+ WGWGL I + F ALVP + L PF + + + G +K D E + + K+AVW P +++YLYN + N +W N+L + L F+D++ G++
Sbjct: 22 NLYWTGNMAIAMSYWNVGIALSFLSTPVSYYLVDNLEADSAMVNTYSAITYLPWCLKIFFGILSDVYPMFGWHRRPWFFLGWGIFMVSNLALTIMGTPGTSALLLLSFSQTMGLLLSDTVADAMIVEATEFEAEENKGRMRTQGYLIRSAGMIIGGLMGSCLYNQSEWGWGLDIGQCFMTQALVPFI---TLCPFWWKLHEIKYQGKIKGFGDMFEECFEFIVKDAVWVPCMYLYLYNFCSISNPSWVNFLFDGLGFTDFEYGML 283
BLAST of mRNA_Ecto-sp9_F_contig1061.557.1 vs.
Match: Hypothetical (protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5H3_9STRA) HSP 1 Score: 223 bits (567), Expect = 1.850e-63 Identity = 110/274 (40.15%), Postives = 168/274 (61.31%), Query Frame = 1
Query: 343 DEELNIYSLASLAIVMSYFSIGVALELLYTPIAYYLIDDLGAESGVYTVWVILVTLPWSFKAAYGFLSDCVPIRGLKRKPYMFIGWGIHIVSNSALAIMGTPGEDAVVILSFLSACGYLLSDVMTDAIVVEKTQRESMSNMGNIQASGYIARYFGSAIGAVGGAVLYNKDTWGWGLTISELFWINALVPLVLVLPLMPFLLEDKKPRETGV--LKRHSDELWTLVQKNAVWRPMIFVYLYNALMLPNGAWTNYLVETLDFSDWDIGVVNICSQV 1158
+ +L+++S+ LA+ M+YF IGV++ + TP+ Y++++LGAE IL++LPWSFK +GF+SD PI G +RKPYM +G H V+ +LA+MGTPG + L++++ G ++ DVM D +VVE+ + E + G QA+ Y R+ GS +GA G V +N WGWGLT E+ I +PL V+PL F + +K E G + ++W VQ AVW+PM FVY YN L +PN AW+++L LDF W +G+++ +
Sbjct: 131 EAQLDLWSIEGLALPMAYFVIGVSVSFITTPLQVYMVEELGAEPEAQNTISILMSLPWSFKLLFGFVSDVNPILGWRRKPYMILGSMAHAVAYLSLALMGTPGIQVLSFLTWVATMGQIMVDVMADTLVVERAKFEPEATRGQTQATCYALRFVGSVLGASSGTVFFNAKAWGWGLTFGEVCLILGALPLFSVVPLA-FFVWEKPIHEKGCKSVVEQCQDIWETVQLKAVWKPMAFVYTYNILQIPNVAWSSFLQIGLDFKPWALGIMSTAGAI 403 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1061.557.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig1061.557.1 >prot_Ecto-sp9_F_contig1061.557.1 ID=prot_Ecto-sp9_F_contig1061.557.1|Name=mRNA_Ecto-sp9_F_contig1061.557.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=390bp MSRRPSVETGVRSNGSGSGGGRAAENGERTPLLFGDEAADHDLDQDDQAPback to top mRNA from alignment at Ecto-sp9_F_contig1061:22131..26759+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig1061.557.1 ID=mRNA_Ecto-sp9_F_contig1061.557.1|Name=mRNA_Ecto-sp9_F_contig1061.557.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=4629bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1061:22131..26759+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1061:22131..26759+ >mRNA_Ecto-sp9_F_contig1061.557.1 ID=mRNA_Ecto-sp9_F_contig1061.557.1|Name=mRNA_Ecto-sp9_F_contig1061.557.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2340bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1061:22131..26759+ (Ectocarpus species9 EcSCA_722f female)back to top |