mRNA_Ecto-sp9_F_contig10589.533.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig10589.533.1
Unique NamemRNA_Ecto-sp9_F_contig10589.533.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig10589.533.1 vs.
Match: Similar (to asp (Abnormal spindle)-like, microcephaly associated n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLN9_ECTSI)

HSP 1 Score: 433 bits (1113), Expect = 8.780e-136
Identity = 258/353 (73.09%), Postives = 262/353 (74.22%), Query Frame = 1
Query:    1 FSFLVSLVSPFQAENLLHPCPCLFRKTAEVKSSVGMLKVFCQFLHGEGDFVRHLKKMGYVVAHVQSYIDEFDFHVSNLAVDLRDGVRLTRLMEVVTGEWGLAIGLRVPAVSRLQKIFNTKRALERLEAVAGPITLGSNSSVSGXXXXXAVTPKDIVDGDRHATLRLLWFIITRYSLSALLDRDALAREAEGV------------------------------------------------------------------------------HPPLELPDVAAMVEGWEEKAGXXXXXXXXXXXXXXXXXXLLSALLVWCQAVCHGYGVPVRNFTTSFADGRALCLLLHYYHPRV 825
            F  LV  +   +AENLLHPCPCLFRKTAEVKSSVGMLKVFCQFLHGEGDFVRHLKKMGYVV HVQSYIDEFDF VSNLAVDLRDGVRLTRLMEVVTGEWGLAIGLRVPAVSRLQKIFNTKRALERLEA AGPITLGSNSS   XXXXXAVTPK+IVDGDRHATLRLLWFIITRYSLSALLDRDALAREAEGV                                                                              HPPLELPDVAAMVEGWEEKAGXXXXXXXXXXXXXXXXXXLLSALLVWCQAVCHGYGVPVRNFTTSFADGRALCLLLHYYHPR+
Sbjct:  475 FLDLVLFLDRAKAENLLHPCPCLFRKTAEVKSSVGMLKVFCQFLHGEGDFVRHLKKMGYVVGHVQSYIDEFDFRVSNLAVDLRDGVRLTRLMEVVTGEWGLAIGLRVPAVSRLQKIFNTKRALERLEADAGPITLGSNSSXXXXXXXXAVTPKEIVDGDRHATLRLLWFIITRYSLSALLDRDALAREAEGVVSAARKWRRAGFSPARPEXXXXXXXXXXXXXXXXXXXXXXXXXXVGEATVVDFGVMSPGSXXXXXAPPAGGRAVAGEEHPPLELPDVAAMVEGWEEKAGXXXXXXXXXXXXXXXXXXLLSALLVWCQAVCHGYGVPVRNFTTSFADGRALCLLLHYYHPRI 827          
BLAST of mRNA_Ecto-sp9_F_contig10589.533.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRH5_9PHAE)

HSP 1 Score: 392 bits (1006), Expect = 2.100e-121
Identity = 234/329 (71.12%), Postives = 240/329 (72.95%), Query Frame = 1
Query:    1 FSFLVSLVSPFQAENLLHPCPCLFRKTAEVKSSVGMLKVFCQFLHGEGDFVRHLKKMGYVVAHVQSYIDEFDFHVSNLAVDLRDGVRLTRLMEVVTGEWGLAIGLRVPAVSRLQKIFNTKRALERLEAVAGPITLGSNSSVSGXXXXXAVTPKDIVDGDRHATLRLLWFIITRYSLSALLDRDALAREAEGV------------------------------------------------------HPPLELPDVAAMVEGWEEKAGXXXXXXXXXXXXXXXXXXLLSALLVWCQAVCHGYGVPVRNFTTSFADGRALCLLLHYYHPRV 825
            F  LV  +   +AENLLHPCPCLFRKTAEVKSSVGMLKVFCQFLHGEGDFVRHLKKMGYVV HVQSYIDEFDFHVSNLAVDLRDGVRLTRLMEVVTGEWGLAIGLRVPAVSRLQ  F        L  VA     G +    G     AV+PKDIVDGDRHATLRLLWFIITRYSLSALLDRDALAREA+GV                                                      HPPLELPDVAAMVEGWEEKAGXXXXXXXXXXXXXXXXXXLLSALLVWCQAVCHGYGVPVRNFTTSFADGRALCLLLHYYHPR+
Sbjct:  362 FLDLVLFLDRAKAENLLHPCPCLFRKTAEVKSSVGMLKVFCQFLHGEGDFVRHLKKMGYVVGHVQSYIDEFDFHVSNLAVDLRDGVRLTRLMEVVTGEWGLAIGLRVPAVSRLQVSFPGI-----LSYVALMFKRGESCGSGGGGG--AVSPKDIVDGDRHATLRLLWFIITRYSLSALLDRDALAREAQGVISAARKWRRAGFSPARPERAMGKMDAIDFGVMSPGSPASPVAPPAEGRAVAGDEHPPLELPDVAAMVEGWEEKAGXXXXXXXXXXXXXXXXXXLLSALLVWCQAVCHGYGVPVRNFTTSFADGRALCLLLHYYHPRI 683          
BLAST of mRNA_Ecto-sp9_F_contig10589.533.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z978_9STRA)

HSP 1 Score: 223 bits (569), Expect = 9.200e-63
Identity = 129/281 (45.91%), Postives = 163/281 (58.01%), Query Frame = 1
Query:   10 LVSLVSPFQAENLLHPCPCLFRKTAEVKSSVGMLKVFCQFLHGEGDFVRHLKKMGYVVAHVQSYIDEFDFHVSNLAVDLRDGVRLTRLMEVVTGEWGLAIG-----LRVPAVSRLQKIFNTKRALERLEAVAGPITLGSNSSVSGXXXXXAVTPKDIVDGDRHATLRLLWFIITRYSLSALLDRDALAREAEGV------HPPLELPDVAAMVEGWEEKAGXXXXXXXXXXXXXXXXXXLLSALLVWCQAVCHGYGVPVRNFTTSFADGRALCLLLHYYHP 819
            LV L+   +   ++   PCLF + AEVK+S G++K  CQF+ GEGD V+HLKK+GY V+HVQ Y+DE+DF V++L  DLRDGVRL RL E++T   G  +G     LRVP V R QK+ NT  A+ RL    G + LG++              KDIVDG +  T+ LLW +I+RY LS+L+D  AL RE   V         L LP +           G                  L  AL VW QAVCHGYGVP+ NFTTSFADGRALCLL+H+YHP
Sbjct:  547 LVLLLDRAKTLEIMEGTPCLFLREAEVKTSEGIIKGLCQFMRGEGDVVKHLKKLGYKVSHVQRYVDEYDFTVTSLKTDLRDGVRLVRLAELLTQGTGKPVGQLTSQLRVPPVDRTQKMHNTGLAVARL-VEDGALPLGTHE--------IGEAAKDIVDGHQGRTIGLLWAVISRYKLSSLVDVQALTREITAVVRVQRKRQQLGLPTL---------HDGPRLCLPSAEAIGLSGHGDLQQALAVWAQAVCHGYGVPIHNFTTSFADGRALCLLVHHYHP 809          
BLAST of mRNA_Ecto-sp9_F_contig10589.533.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KPU1_9STRA)

HSP 1 Score: 200 bits (509), Expect = 9.670e-55
Identity = 115/279 (41.22%), Postives = 159/279 (56.99%), Query Frame = 1
Query:    1 FSFLVSLVSPFQAENLLHPCPCLFRKTAEVKSSVGMLKVFC-QFLHGEGDFVRHLKKMGYVVAHVQSYIDEFDFHVSNLAVDLRDGVRLTRLMEVVTGEWGLAIGL--RVPAVSRLQKIFNTKRALERLEAVAGPITLGSNSSVSGXXXXXAVTPKDIVDGDRHATLRLLWFIITRYSLSALLDRDALAREAEGVHPPLELPD-VAAMVEGWEEKAGXXXXXXXXXXXXXXXXXXLLSALLVWCQAVCHGYGVPVRNFTTSFADGRALCLLLHYYHPRV 825
            F  LV  +   ++ENLL+  PCLF     VKSS  ML  FC + L GEG+ +RHL  +G  V++ Q  IDE+DF V NLAVDLRDGVRL RL+E+++G+  +++ L  R+PAVSRLQK+ N + AL  L             S  G      V+PK +VDG +   L+LLW  I  + LS L++ DAL RE   VH   +  + + + +  +E  A                   LL   L WCQ +C  +G+ ++NF+TSFADG+ALC L+HYYHP +
Sbjct:  699 FLLLVVFLDRGKSENLLNTIPCLFHSKGLVKSSRDMLLSFCRECLSGEGNIIRHLSYIGLTVSYEQKLIDEYDFSVKNLAVDLRDGVRLGRLVELLSGDDAVSLSLQMRLPAVSRLQKLHNVRLALSSL-------------SFHGVPDIDDVSPKHVVDGHQSKVLKLLWSTIAHFKLSTLINEDALEREIRNVHRSNKRRNKLRSRLADFETNAARDSLSEEHIPNYKDQIAVLL---LTWCQTICSSFGLAIKNFSTSFADGKALCYLIHYYHPGI 961          
BLAST of mRNA_Ecto-sp9_F_contig10589.533.1 vs.
Match: abnormal (spindle-like microcephaly-associated protein homolog n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138F9FE1)

HSP 1 Score: 197 bits (500), Expect = 1.680e-53
Identity = 110/274 (40.15%), Postives = 150/274 (54.74%), Query Frame = 1
Query:    1 FSFLVSLVSPFQAENLLHPCPCLFRKTAEVKSSVGMLKVFCQ-FLHGEGDFVRHLKKMGYVVAHVQSYIDEFDFHVSNLAVDLRDGVRLTRLMEVVTGEWGLAIGLRVPAVSRLQKIFNTKRALERLEAVAGPITLGSNSSVSGXXXXXAVTPKDIVDGDRHATLRLLWFIITRYSLSALLDRDALAREAEGVHPPLELPDVAAMVEGWEEKAGXXXXXXXXXXXXXXXXXXLLSALLVWCQAVCHGYGVPVRNFTTSFADGRALCLLLHYYHP 819
            F  LV  +   +   L+   PCLF + AE K+S  +L  F + +L GEGD  +HL  +G+ V+H Q  IDEFD+ V+N+A DLRDG+RLTR++E+++  W L   LRVPA+SRLQKI N +  L+ L+    P+  G  S +         TP+ IVDG R  TL LLW II  + ++ LL  + L  E   +   L+L    A  +      G                   L  LL WC+ VC  YG+ + NFT SF+DGRALC LLH+YHP
Sbjct:  698 FLLLVLFLDHAKLTRLIDHDPCLFNRDAEFKASRDLLLTFSRDYLKGEGDLTKHLSYLGFNVSHQQRAIDEFDYAVTNIATDLRDGLRLTRVVELLSHNWRLTSTLRVPAISRLQKIHNVEVVLKALKDHGVPVGEGEGSGI---------TPRHIVDGHREKTLNLLWMIIVNFQVNILLSEEKLKEEISFLEQSLDLEHCLAACDV-SRIMGLPRNKRDSLESGLYFKSARLGLLLKWCRLVCKSYGLKIDNFTVSFSDGRALCYLLHHYHP 961          
BLAST of mRNA_Ecto-sp9_F_contig10589.533.1 vs.
Match: LOW (QUALITY PROTEIN: abnormal spindle-like microcephaly-associated protein homolog n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI0014586E23)

HSP 1 Score: 195 bits (496), Expect = 5.850e-53
Identity = 108/274 (39.42%), Postives = 154/274 (56.20%), Query Frame = 1
Query:    1 FSFLVSLVSPFQAENLLHPCPCLFRKTAEVKSSVGMLKVFCQ-FLHGEGDFVRHLKKMGYVVAHVQSYIDEFDFHVSNLAVDLRDGVRLTRLMEVVTGEWGLAIGLRVPAVSRLQKIFNTKRALERLEAVAGPITLGSNSSVSGXXXXXAVTPKDIVDGDRHATLRLLWFIITRYSLSALLDRDALAREAEGVHPPLELPDVAAMVEGWEEKAGXXXXXXXXXXXXXXXXXXLLSALLVWCQAVCHGYGVPVRNFTTSFADGRALCLLLHYYHP 819
            F  L+  +   ++  L++  PCLF K +E KS+  ML  F + +L GEGD  +HL  +GYVV H Q+ +DEFD+ V+NLA DLRDGVRLTR++E++T  W L+  LR PA+SRLQK+ N +   + L A    +T      +         T KDIVDG R  TL +LW +I +Y +  LL++D L  E   +   L + +  A ++ +E+  G                   L  LL WC+ VC  Y + + NFT SF DGRA+C L+H+YHP
Sbjct: 1389 FFMLIFFLDKAKSHRLINHDPCLFCKDSEYKSTKAMLIQFSRNYLSGEGDVTKHLGYLGYVVTHQQTSMDEFDYAVTNLATDLRDGVRLTRVLELLTNHWDLSKTLRAPAISRLQKVHNMEVVFKALTAQG--VTFDKEKKI---------TTKDIVDGHREKTLHVLWALILQYQVDVLLNKDQLKEEINILQRSLSVRNQLADLQRYEQ--GLSKKRRESAEQDLHMQSDSLLLLLRWCRTVCAFYHIKIENFTVSFGDGRAMCALVHHYHP 1649          
BLAST of mRNA_Ecto-sp9_F_contig10589.533.1 vs.
Match: abnormal (spindle-like microcephaly-associated protein homolog n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8IQ79_ACTTE)

HSP 1 Score: 195 bits (495), Expect = 7.850e-53
Identity = 112/277 (40.43%), Postives = 155/277 (55.96%), Query Frame = 1
Query:    1 FSFLVSLVSPFQAENLLHPCPCLFRKTAEVKSSVGMLKVFC-QFLHGEGDFVRHLKKMGYVVAHVQSYIDEFDFHVSNLAVDLRDGVRLTRLMEVVTGEWGLAIGLRVPAVSRLQKIFNTKRALERLEAVAGPITLGSNSSVSGXXXXXAVTPKDIVDGDRHATLRLLWFIITRYSLSALLDRDALAREAEGVHPPLELPD-VAAMVEGWEEKAGXXXXXXXXXXXXXXXXXXLLSALLVWCQAVCHGYGVPVRNFTTSFADGRALCLLLHYYHPRV 825
            F FLV  +   +   L+   PCLF K AE KSS  +L  F  ++L GEGD  +HL  +G+ V H Q  IDEF++ V+N+A DLRDG+RLTR++E++T  W L   LRVPA+SRLQKI N +  ++ L     P+  G++S ++         P+ IVDG R  TL+LLW II  + ++ LL+   L  E   +    EL + +  +     +  G                   LS LL WC+ VC  +G+ V NFT SF+DGRALC LLHYYHP +
Sbjct:  696 FLFLVLFLDRAKLTRLIDHDPCLFVKNAEYKSSRSLLLTFSREYLKGEGDITKHLSYLGFSVNHEQRPIDEFNYAVTNIATDLRDGLRLTRVVELLTHNWQLTQSLRVPAISRLQKIHNVEVFMKALRDRNVPVGEGTDSGIN---------PRHIVDGHREKTLQLLWLIIFNFQVNILLNEKQLQEEISFLDQNQELQNRLDTITVDGSKILGLPRSKRESLENNIYFKSPRLSLLLKWCRHVCKLFGMKVENFTVSFSDGRALCYLLHYYHPNL 963          
BLAST of mRNA_Ecto-sp9_F_contig10589.533.1 vs.
Match: Abnormal (spindle-like microcephaly-associated protein-like n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210QLT1_MIZYE)

HSP 1 Score: 191 bits (484), Expect = 2.360e-51
Identity = 103/274 (37.59%), Postives = 152/274 (55.47%), Query Frame = 1
Query:    1 FSFLVSLVSPFQAENLLHPCPCLFRKTAEVKSSVGMLKVFCQ-FLHGEGDFVRHLKKMGYVVAHVQSYIDEFDFHVSNLAVDLRDGVRLTRLMEVVTGEWGLAIGLRVPAVSRLQKIFNTKRALERLEAVAGPITLGSNSSVSGXXXXXAVTPKDIVDGDRHATLRLLWFIITRYSLSALLDRDALAREAEGVHPPLELPDVAAMVEGWEEKAGXXXXXXXXXXXXXXXXXXLLSALLVWCQAVCHGYGVPVRNFTTSFADGRALCLLLHYYHP 819
            F  L+  +   ++  L++  PCLF K +E KS+  ML  F + +L GEGD  +HL  +GYVV H Q+ +DEFD+ V+NLA DLRDG+RLTR++E++T  W L+  LR PA+SRLQK+ N +   + L      +T  +   +         TPKD+ DG R  TL +LW +I +Y +  LL+ + L  E + +   L + +    +  +E+  G                   L  LL WC+ VC  Y + + NFT SF DGRA+C L+H+YHP
Sbjct: 1415 FFMLIFFLDQAKSNRLINHDPCLFCKDSEFKSTKAMLIQFSRNYLSGEGDVTKHLGYLGYVVTHQQTSMDEFDYAVTNLATDLRDGIRLTRILELLTNHWDLSKKLRTPAISRLQKVHNMEVVFKALTTQG--VTFDNEKKI---------TPKDLCDGHREKTLHVLWGLILQYQVDVLLNEEQLREEIDILQRSLRVRNQLEALHRYEQ--GLSKKRRESAEQDLHMQNDRLLLLLRWCRTVCAFYHIKIENFTVSFGDGRAMCALVHHYHP 1675          
BLAST of mRNA_Ecto-sp9_F_contig10589.533.1 vs.
Match: abnormal (spindle-like microcephaly-associated protein homolog n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3KBD7_LINUN)

HSP 1 Score: 190 bits (483), Expect = 3.180e-51
Identity = 109/275 (39.64%), Postives = 151/275 (54.91%), Query Frame = 1
Query:    1 FSFLVSLVSPFQAENLLHPCPCLFRKTAEVKSSVGMLKVFCQ-FLHGEGDFVRHLKKMGYVVAHVQSYIDEFDFHVSNLAVDLRDGVRLTRLMEVVTGEWGLAIGLRVPAVSRLQKIFNTKRALERLEAVAGPITLGSNSSVSGXXXXXAVTPKDIVDGDRHATLRLLWFIITRYSLSALLDRDALAREAEGVHPPLELPDVAAMVEGWEEKAGXXXXXXXXXXXXXXXXXXL-LSALLVWCQAVCHGYGVPVRNFTTSFADGRALCLLLHYYHP 819
            F  LV  +   +   L+   PCLF K +E K+S  +L  F + +L GEGD +RHL  +G  + H Q+ +DEFDF V+ L+ DLRDGVRL R++E++T +W L+  LRVPA+SRLQKI N + AL+ L      +T              A+ P+D+VDG R  TL +LW +I  + +  LL+ D L  E + +   L +      V  +E   G                    LS LL WC+AVC  Y + V NFT SF+DGRALC L+H+YHP
Sbjct: 1262 FLVLVFFLDTAKKARLIEHDPCLFCKDSEFKASRDLLLQFSRDYLRGEGDIIRHLGYLGCQITHAQTALDEFDFAVTKLSKDLRDGVRLARIVELLTRDWSLSSLLRVPAISRLQKIHNVEVALKALANRGLDVTTPQGG---------AINPRDVVDGHREKTLAMLWRVIFNFQVDVLLNLDQLREEVDFLKKTLCVKTHLTAVLNYENDLGLERGGRRESMEPDLYFKSNGLSLLLKWCKAVCAFYNLEVENFTVSFSDGRALCYLVHHYHP 1527          
BLAST of mRNA_Ecto-sp9_F_contig10589.533.1 vs.
Match: abnormal (spindle-like microcephaly-associated protein homolog n=3 Tax=Hydra vulgaris TaxID=6087 RepID=A0A8B7E8F0_HYDVU)

HSP 1 Score: 190 bits (482), Expect = 4.270e-51
Identity = 115/277 (41.52%), Postives = 154/277 (55.60%), Query Frame = 1
Query:    1 FSFLVSLVSPFQAENLLHPCPCLFRKTAEVKSSVGMLKVFCQ-FLHGEGDFVRHLKKMGYVVAHVQSYIDEFDFHVSNLAVDLRDGVRLTRLMEVVTGEWGLAIGLRVPAVSRLQKIFNTKRALERLEAVAGPITLGSNSSVSGXXXXXAVTPKDIVDGDRHATLRLLWFIITRYSLSALLDRDALAREAEGVHPPLEL-PDVAAMVEGWEEKAGXXXXXXXXXXXXXXXXXXLLSALLVWCQAVCHGYGVPVRNFTTSFADGRALCLLLHYYHPRV 825
            F  LV  +   +   L+   PCLF K +E K+S  +L  F + +L GEGD  +HL  MG VV H QS IDE+DF + NLAVDLRDGVRL R++E++T +W  +  LR+PAVSRLQKI N   AL  L+        G N S+          PK++VDG R  TL LLW II  + ++ LLD + L  E E     L++  ++A++ E   E  G                   ++ LL WCQ +C  Y V V NFT SF+DG ALC L++YYHP +
Sbjct:  534 FLLLVIFLDRAKQNRLIEHDPCLFLKNSEFKTSRDLLLAFSRDYLKGEGDITKHLSYMGIVVQHQQSVIDEYDFGLKNLAVDLRDGVRLVRVLELLTKDWSHSSKLRLPAVSRLQKIHNNSVALGILK------NHGLNLSIE---------PKNVVDGHREKTLMLLWQIIFHFEVNMLLDIEKLKEEIEYQKKRLQVNKELASLSESLPESHGELISAYEKSEK--------MTLLLNWCQIICSHYEVKVENFTVSFSDGIALCCLVNYYHPDI 787          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10589.533.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Similar8.780e-13673.09to asp (Abnormal spindle)-like, microcephaly assoc... [more]
Uncharacterized2.100e-12171.12protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized9.200e-6345.91protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Hypothetical9.670e-5541.22protein (Fragment) n=1 Tax=Leptocylindrus danicus ... [more]
abnormal1.680e-5340.15spindle-like microcephaly-associated protein homol... [more]
LOW5.850e-5339.42QUALITY PROTEIN: abnormal spindle-like microcephal... [more]
abnormal7.850e-5340.43spindle-like microcephaly-associated protein homol... [more]
Abnormal2.360e-5137.59spindle-like microcephaly-associated protein-like ... [more]
abnormal3.180e-5139.64spindle-like microcephaly-associated protein homol... [more]
abnormal4.270e-5141.52spindle-like microcephaly-associated protein homol... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10589contigEcto-sp9_F_contig10589:789..2830 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score434.1
Seed ortholog evalue4.8e-119
Seed eggNOG ortholog2880.D8LLN9
Preferred nameASPM
KEGG koko:K16743,ko:K16774
GOsGO:0000003,GO:0000212,GO:0000226,GO:0000280,GO:0000922,GO:0001764,GO:0002052,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005516,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005813,GO:0005815,GO:0005819,GO:0005856,GO:0005874,GO:0005886,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007292,GO:0007399,GO:0007405,GO:0007417,GO:0007420,GO:0007548,GO:0008150,GO:0008283,GO:0008284,GO:0008406,GO:0008584,GO:0009786,GO:0009966,GO:0009967,GO:0009987,GO:0010646,GO:0010647,GO:0010720,GO:0010721,GO:0015630,GO:0016020,GO:0016043,GO:0016324,GO:0016477,GO:0017145,GO:0019827,GO:0019899,GO:0019900,GO:0019901,GO:0019953,GO:0021537,GO:0021543,GO:0021872,GO:0021873,GO:0021987,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0023051,GO:0023056,GO:0030111,GO:0030154,GO:0030177,GO:0030496,GO:0030900,GO:0032501,GO:0032502,GO:0032504,GO:0036445,GO:0036449,GO:0040007,GO:0040011,GO:0042127,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044085,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044446,GO:0044459,GO:0044464,GO:0044703,GO:0045137,GO:0045177,GO:0045595,GO:0045596,GO:0045597,GO:0045664,GO:0045665,GO:0045769,GO:0046546,GO:0046661,GO:0048103,GO:0048232,GO:0048285,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048589,GO:0048608,GO:0048609,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0048870,GO:0050767,GO:0050768,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0051093,GO:0051094,GO:0051179,GO:0051225,GO:0051235,GO:0051239,GO:0051240,GO:0051241,GO:0051301,GO:0051302,GO:0051321,GO:0051445,GO:0051640,GO:0051641,GO:0051642,GO:0051651,GO:0051653,GO:0051657,GO:0051661,GO:0051674,GO:0051704,GO:0051726,GO:0051782,GO:0051960,GO:0051961,GO:0051962,GO:0055057,GO:0060284,GO:0060322,GO:0060828,GO:0061351,GO:0061458,GO:0061842,GO:0065007,GO:0065008,GO:0070925,GO:0071840,GO:0071944,GO:0072089,GO:0072091,GO:0072686,GO:0072687,GO:0090263,GO:0090306,GO:0097150,GO:0097431,GO:0098590,GO:0098727,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0140013,GO:1902692,GO:1903046,GO:1990752,GO:2000026,GO:2000177,GO:2000179,GO:2000241,GO:2000648
EggNOG free text desc.translation initiation factor activity
EggNOG OGsCOG5022@1,KOG0160@2759,KOG0165@1,KOG0165@2759
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-04_005040.1
Exons5
Model size825
Cds size825
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10589.533.1prot_Ecto-sp9_F_contig10589.533.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig10589 789..2830 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928274.9385912-CDS-Ecto-sp9_F_contig10589:788..8751622928274.9385912-CDS-Ecto-sp9_F_contig10589:788..875Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10589 789..875 +
1692277817.188198-CDS-Ecto-sp9_F_contig10589:788..8751692277817.188198-CDS-Ecto-sp9_F_contig10589:788..875Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10589 789..875 +
1622928274.9558506-CDS-Ecto-sp9_F_contig10589:1095..12131622928274.9558506-CDS-Ecto-sp9_F_contig10589:1095..1213Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10589 1096..1213 +
1692277817.1994765-CDS-Ecto-sp9_F_contig10589:1095..12131692277817.1994765-CDS-Ecto-sp9_F_contig10589:1095..1213Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10589 1096..1213 +
1622928274.9692566-CDS-Ecto-sp9_F_contig10589:1490..16271622928274.9692566-CDS-Ecto-sp9_F_contig10589:1490..1627Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10589 1491..1627 +
1692277817.2081292-CDS-Ecto-sp9_F_contig10589:1490..16271692277817.2081292-CDS-Ecto-sp9_F_contig10589:1490..1627Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10589 1491..1627 +
1622928274.9801364-CDS-Ecto-sp9_F_contig10589:2110..23441622928274.9801364-CDS-Ecto-sp9_F_contig10589:2110..2344Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10589 2111..2344 +
1692277817.217536-CDS-Ecto-sp9_F_contig10589:2110..23441692277817.217536-CDS-Ecto-sp9_F_contig10589:2110..2344Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10589 2111..2344 +
1622928274.9969025-CDS-Ecto-sp9_F_contig10589:2581..28301622928274.9969025-CDS-Ecto-sp9_F_contig10589:2581..2830Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10589 2582..2830 +
1692277817.2273972-CDS-Ecto-sp9_F_contig10589:2581..28301692277817.2273972-CDS-Ecto-sp9_F_contig10589:2581..2830Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10589 2582..2830 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig10589.533.1

>prot_Ecto-sp9_F_contig10589.533.1 ID=prot_Ecto-sp9_F_contig10589.533.1|Name=mRNA_Ecto-sp9_F_contig10589.533.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=275bp
FSFLVSLVSPFQAENLLHPCPCLFRKTAEVKSSVGMLKVFCQFLHGEGDF
VRHLKKMGYVVAHVQSYIDEFDFHVSNLAVDLRDGVRLTRLMEVVTGEWG
LAIGLRVPAVSRLQKIFNTKRALERLEAVAGPITLGSNSSVSGGGGGGAV
TPKDIVDGDRHATLRLLWFIITRYSLSALLDRDALAREAEGVHPPLELPD
VAAMVEGWEEKAGGGSGDGGRRGGGGGGDEELLSALLVWCQAVCHGYGVP
VRNFTTSFADGRALCLLLHYYHPRV
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mRNA from alignment at Ecto-sp9_F_contig10589:789..2830+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig10589.533.1 ID=mRNA_Ecto-sp9_F_contig10589.533.1|Name=mRNA_Ecto-sp9_F_contig10589.533.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=2042bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10589:789..2830+ (Ectocarpus species9 EcSCA_722f female)
TTTTCTTTTTTGGTCTCGCTTGTCTCCCCCTTTCAGGCCGAGAATCTCCT GCATCCGTGCCCTTGTCTCTTCCGCAAGACCGCCGAGGTATGTCGAAGCT GCTTTTCTCGAAAGGCTATGTGCCCGATGTTCGATTGGCCAGGCAGGCTA CCGATCAACTCATGCATTCCCACCCAGTCCATCCCATATGTCTTTGTTTG CTATTCGAGGCCGCTTTGATGTCACGTCGAGAATTTTAATGGCAGGCTCC CTCACCGCCGGTGCTGACGTGCGGCGGGGCCTCCGTGTCTCGTTGTCGTT TCGTCAGGTGAAGTCTAGCGTGGGCATGCTGAAGGTGTTCTGCCAGTTCC TGCATGGAGAGGGAGACTTCGTGCGGCACCTCAAGAAGATGGGATACGTC GTTGCGCACGTGCAGTCGTACATAGGTAAGGGGCTCCGCGAGTTGGGAGG TGGTGCGGCGCACGGAGAAGAGACGATGGTGTACGAAGTTCGTTCTTGGT AGGGTTGTGATGTCGTACCCAGCAGTATGTAGTTCGAGTAGCCAGCACTT CTGAATGTTGTATGATTATATTTGAGAAACATGCTTGTTCCACTTCAAGC CAGTGACCCATACGTCAGCATTCTTTCGTGATGGTGCCCTGTCGCCTGTG GTGGTGGTGGTGGTGGTGGTGTGTTGGCGTTTGGACGTGCTGTCCCGGGC AGACGAGTTCGATTTCCACGTTAGCAACCTGGCCGTCGACCTGCGGGACG GAGTGCGGCTGACCCGCCTCATGGAGGTGGTGACGGGAGAGTGGGGGCTG GCCATCGGTCTTCGCGTCCCCGCCGTGTCGAGGCTTCAGGTGAGTTTTCC TTGCACGTTTTCTTCCCCAGCCTTGACGTATAAACGGGGCGAATCATGGT TTGTTTCGCTCTCTAATGTACCGTAGGTTTATCCTAGGCCAGCAAGTTTT GGGCGAAGCGTGAGTCCGTTGGGCAGGATTTTGCCGGAATTTTGTTGGAT GGTCATCGGTGTATGTTTGGCGTTGAGGTTATCACGAAGGTGATTATTGT TTCCATGGCTTGAGCTGGGGCTGATGCTGTGGTCACCCTTCCGAACCACC GCTTGTCTCACGCTTGAGTTTATTTCCAAAGTGATACTCTCACTCTCGAG TAACTCCGGGTAATTTTCACGTGCTTGTGGTCTCGATGAATGGCGTACGC CGCCCACGGAGCCGTGGCCCTTAACTTTGTTCAGGTTCCTGTCGCAAAGG TACACACATCTGCACCCCAGGTTCAGACTTCCTGACACATCACCCCGCCC CCCGCCTTGTACCTATCCGCAGAAAATTTTCAACACGAAGAGGGCGTTGG AACGGTTGGAGGCCGTCGCTGGCCCGATCACGCTGGGCAGCAACAGCAGC GTCAGCGGCGGCGGTGGCGGCGGCGCGGTGACCCCGAAGGACATCGTGGA CGGCGACCGACACGCCACCCTGCGCCTCCTCTGGTTCATTATCACCCGCT ACTCGCTTTCCGCCCTCCTCGACCGCGACGCCCTGGCCCGGGAGGCGGAG GGCGTGGTCTCCGCCGCTAGGAAGTGGCGCCGCGCGGGCTTCTCTCCGGC TCGACCCGAGCGCGCCATGAGGAAGATGGGTGCCATCGGTGCCGCCGCCG CTGCCGCCGCCGCCGCCGCCGGGGCTGCTGCTGCTGCTGGGGTTGGAGAG GCTACCGTCGTAGATTTCGGGGTGATGTCCCCTGGATCTCCGGCGTCTCC CGTGGCGCCTCCGGCCGGGGGGCGTGCGGTTGCCGGGGATGAGCATCCCC CCCTTGAGCTGCCGGATGTGGCCGCCATGGTCGAGGGCTGGGAGGAGAAG GCGGGCGGCGGCAGCGGGGACGGGGGGCGCCGTGGCGGCGGTGGCGGCGG CGACGAGGAGCTGCTGTCCGCGCTGCTGGTGTGGTGCCAGGCCGTGTGTC ACGGGTATGGGGTGCCGGTGCGGAACTTCACGACCTCGTTCGCGGACGGC CGGGCCCTGTGCCTGCTGTTGCACTACTACCACCCGAGGGTG
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig10589:789..2830+

>mRNA_Ecto-sp9_F_contig10589.533.1 ID=mRNA_Ecto-sp9_F_contig10589.533.1|Name=mRNA_Ecto-sp9_F_contig10589.533.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1650bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10589:789..2830+ (Ectocarpus species9 EcSCA_722f female)
TTTTCTTTTTTGGTCTCGCTTGTCTCCCCCTTTCAGGCCGAGAATCTCCT
GCATCCGTGCCCTTGTCTCTTCCGCAAGACCGCCGAGTTTTCTTTTTTGG
TCTCGCTTGTCTCCCCCTTTCAGGCCGAGAATCTCCTGCATCCGTGCCCT
TGTCTCTTCCGCAAGACCGCCGAGGTGAAGTCTAGCGTGGGCATGCTGAA
GGTGTTCTGCCAGTTCCTGCATGGAGAGGGAGACTTCGTGCGGCACCTCA
AGAAGATGGGATACGTCGTTGCGCACGTGCAGTCGTACATAGGTGAAGTC
TAGCGTGGGCATGCTGAAGGTGTTCTGCCAGTTCCTGCATGGAGAGGGAG
ACTTCGTGCGGCACCTCAAGAAGATGGGATACGTCGTTGCGCACGTGCAG
TCGTACATAGACGAGTTCGATTTCCACGTTAGCAACCTGGCCGTCGACCT
GCGGGACGGAGTGCGGCTGACCCGCCTCATGGAGGTGGTGACGGGAGAGT
GGGGGCTGGCCATCGGTCTTCGCGTCCCCGCCGTGTCGAGGCTTCAGACG
AGTTCGATTTCCACGTTAGCAACCTGGCCGTCGACCTGCGGGACGGAGTG
CGGCTGACCCGCCTCATGGAGGTGGTGACGGGAGAGTGGGGGCTGGCCAT
CGGTCTTCGCGTCCCCGCCGTGTCGAGGCTTCAGAAAATTTTCAACACGA
AGAGGGCGTTGGAACGGTTGGAGGCCGTCGCTGGCCCGATCACGCTGGGC
AGCAACAGCAGCGTCAGCGGCGGCGGTGGCGGCGGCGCGGTGACCCCGAA
GGACATCGTGGACGGCGACCGACACGCCACCCTGCGCCTCCTCTGGTTCA
TTATCACCCGCTACTCGCTTTCCGCCCTCCTCGACCGCGACGCCCTGGCC
CGGGAGGCGGAGGGCGTGAAAATTTTCAACACGAAGAGGGCGTTGGAACG
GTTGGAGGCCGTCGCTGGCCCGATCACGCTGGGCAGCAACAGCAGCGTCA
GCGGCGGCGGTGGCGGCGGCGCGGTGACCCCGAAGGACATCGTGGACGGC
GACCGACACGCCACCCTGCGCCTCCTCTGGTTCATTATCACCCGCTACTC
GCTTTCCGCCCTCCTCGACCGCGACGCCCTGGCCCGGGAGGCGGAGGGCG
TGCATCCCCCCCTTGAGCTGCCGGATGTGGCCGCCATGGTCGAGGGCTGG
GAGGAGAAGGCGGGCGGCGGCAGCGGGGACGGGGGGCGCCGTGGCGGCGG
TGGCGGCGGCGACGAGGAGCTGCTGTCCGCGCTGCTGGTGTGGTGCCAGG
CCGTGTGTCACGGGTATGGGGTGCCGGTGCGGAACTTCACGACCTCGTTC
GCGGACGGCCGGGCCCTGTGCCTGCTGTTGCACTACTACCACCCGAGGGT
GCATCCCCCCCTTGAGCTGCCGGATGTGGCCGCCATGGTCGAGGGCTGGG
AGGAGAAGGCGGGCGGCGGCAGCGGGGACGGGGGGCGCCGTGGCGGCGGT
GGCGGCGGCGACGAGGAGCTGCTGTCCGCGCTGCTGGTGTGGTGCCAGGC
CGTGTGTCACGGGTATGGGGTGCCGGTGCGGAACTTCACGACCTCGTTCG
CGGACGGCCGGGCCCTGTGCCTGCTGTTGCACTACTACCACCCGAGGGTG
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