mRNA_Ecto-sp9_F_contig1053.495.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig1053.495.1
Unique NamemRNA_Ecto-sp9_F_contig1053.495.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig1053.495.1 vs.
Match: Rhodanese (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCI4_ECTSI)

HSP 1 Score: 402 bits (1032), Expect = 7.410e-140
Identity = 209/217 (96.31%), Postives = 211/217 (97.24%), Query Frame = 1
Query:    1 MSLRMGSNRGSVRANALDKRVPRNPRYAGVKSKASTAVQTGMTVDKVTFVTTRQHLRRREEPYFRLTPSQLNELLSEYEQQDQQEGVQDFRDHIDPDHHGPKVVEYEPDAKPSYDRPYLVLDVRTPEEFKRCRIVQARSFEAKLLNQDRMTPELYMYKNREGGLVILYSNDDADACHAARTLIHRGFDNIFVLSGGLVAFAREGFQSFVEGNVEALP 651
            MSLRMGSNRGSVRANALDKRVPRNPRYAGVKSK    VQTGMTVDKVTFVTTRQHLRRREEPYFRLTPSQLNELLSEYEQ DQQEGVQDFRDHIDPDHHGPKVVEYEPDAKPSYDRPYLVLDVR+PEEFKRCRIVQARSFEAKLLNQDRMTPELYMYKNREGGLVILYSNDDADA HAARTLIHRGFDNIFVLSGGLVAFAREGFQSFVEG+VEALP
Sbjct:    1 MSLRMGSNRGSVRANALDKRVPRNPRYAGVKSK----VQTGMTVDKVTFVTTRQHLRRREEPYFRLTPSQLNELLSEYEQ-DQQEGVQDFRDHIDPDHHGPKVVEYEPDAKPSYDRPYLVLDVRSPEEFKRCRIVQARSFEAKLLNQDRMTPELYMYKNREGGLVILYSNDDADAGHAARTLIHRGFDNIFVLSGGLVAFAREGFQSFVEGDVEALP 212          
BLAST of mRNA_Ecto-sp9_F_contig1053.495.1 vs.
Match: Rhodanese (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFI4_9PHAE)

HSP 1 Score: 367 bits (941), Expect = 3.390e-124
Identity = 198/204 (97.06%), Postives = 199/204 (97.55%), Query Frame = 1
Query:  124 MTVDKVTFVTTRQHLRRREEPYFRLTPSQLNELLSEYEQQDQQEGVQDFRDHIDPDHHGPKVVEYEPDAKPSYDRPYLVLDVRTPEEFKRCRIVQARSFEAKLLNQDRMTPELYMYKNREGGLVILYSNDDADACHAARTLIHRGFDNIFVLSGGLVAFAREGFQSFVEGNVEALPPXXXXXXXXXGTLRIGCGGGLRSTALSD 735
            MTVDKVTFVTTRQHLRRREEPYFRLTPSQLNELLSEYEQ DQQEGV DFRDHIDPDHHGPKVVEYEPDAKPSYDRPYLVLDVRTPEEFKRCRIVQARSFEAKLLNQDRMTPELYMYKNREGGLVILYSNDDADACHAARTLIHRGFDNIFVLSGGLVAFAREGFQSFVEGNVEALPPXXXXXXXXX TLR G GGGLRSTA+SD
Sbjct:    1 MTVDKVTFVTTRQHLRRREEPYFRLTPSQLNELLSEYEQ-DQQEGVHDFRDHIDPDHHGPKVVEYEPDAKPSYDRPYLVLDVRTPEEFKRCRIVQARSFEAKLLNQDRMTPELYMYKNREGGLVILYSNDDADACHAARTLIHRGFDNIFVLSGGLVAFAREGFQSFVEGNVEALPPXXXXXXXXXXTLRTGGGGGLRSTAVSD 203          
BLAST of mRNA_Ecto-sp9_F_contig1053.495.1 vs.
Match: Rhodanese-like (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB11_9STRA)

HSP 1 Score: 219 bits (559), Expect = 1.990e-67
Identity = 113/195 (57.95%), Postives = 148/195 (75.90%), Query Frame = 1
Query:   49 LDKRVPRNPRYAGVKSKASTAVQTGMTVDKVTFVTTRQHLRRREEPYFRLTPSQLNELLSEYEQQDQQEGVQDFRDHIDPDHHGPKVVEYEPDAKPSYDRPYLVLDVRTPEEFKRCRIVQARSFEAKLLNQDRMTPELYMYKNREGGLVILYSNDDADACHAARTLIHRGFDNIFVLSGGLVAFAREGFQSFVEG 633
            +++R+P NPRYA V+S+    + TG+TVDKV +VT ++ LRRR+EPY+R+TP QL +LLSEYEQ D QEGVQD     DPD HGP VV Y  +A+ +YDRPYL+LD+RTPEE+   R+ QARSF   +LNQDRMT EL+ +KNREG L++LY +++  AC AA+TL+HRGFDN++VLSGGL AF       F+EG
Sbjct:    1 MERRIPENPRYAHVRSR----LDTGLTVDKVKYVTAKEFLRRRDEPYYRVTPGQLFDLLSEYEQ-DLQEGVQDMASKQDPDSHGPVVVTYTEEAEAAYDRPYLILDLRTPEEYTVHRVAQARSFPIVMLNQDRMTAELFKFKNREGTLIVLYEDEERLACQAAQTLLHRGFDNVYVLSGGLQAFTHL-HPDFIEG 189          
BLAST of mRNA_Ecto-sp9_F_contig1053.495.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V7G5_9STRA)

HSP 1 Score: 184 bits (467), Expect = 1.620e-54
Identity = 105/227 (46.26%), Postives = 148/227 (65.20%), Query Frame = 1
Query:   49 LDKRVPRNPRYAGVKSKASTAVQTGMTVDKVTFVTTRQHLRRREEPYFRLTPSQLNELLSEYEQQDQQEGVQDFRDHIDPDHHGPKVVEYEPDAKPSYDRPYLVLDVRTPEEFKRCRIVQARSFEAKLLNQDRMTPELYMYKNREGGLVILYSNDDADACHAARTLIHRGFDNIFVLSGGLVAFAREGFQSFVEGNVEALPPXXXXXXXXXGTLRIGCGGGLRSTAL 729
            LDK+VPRNP+Y  V+S+    + TGMTVDKV +++T ++L+RR E +FRL+ +QL+ L +EYE   +     D  ++      GP+VV  E D KPSY RPYL+LD+RT +E+ +C I+QARSF  ++LNQD+M  +LY YKN+EG L++LY +++A +  A  TL+ RGFDNIF+L+GGL  F+ E    +VEG     PP         G+ R G G G RS  L
Sbjct:   12 LDKKVPRNPKYDDVRSR----IDTGMTVDKVKYISTSEYLKRRNELFFRLSSNQLHALFAEYEADHE-----DVEENKGGGFDGPRVVTIEADEKPSYQRPYLLLDLRTQQEYTQCHIMQARSFPMQMLNQDKMIADLYQYKNKEGQLIVLYCDNEAISSQAGHTLVTRGFDNIFLLTGGLFTFS-ELHPLYVEGT----PPERPRNDNSRGSNRSGSGRGGRSGRL 224          
BLAST of mRNA_Ecto-sp9_F_contig1053.495.1 vs.
Match: Rhodanese (domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3P2P0_9STRA)

HSP 1 Score: 146 bits (369), Expect = 5.720e-39
Identity = 92/219 (42.01%), Postives = 130/219 (59.36%), Query Frame = 1
Query:   49 LDKRVPRNPRYAGVKSKASTAVQTGMTVDKVTFVTTRQHLRRREEPYFRLTPSQLNELLSEYEQQ---DQQEGVQDF-----------RDHIDPDHH---GPKVVEYEPDAKPSYDRPYLVLDVRTPEEFKRCRIVQARSFEAKLLNQDRMTPELYMYKNREGGLVILYSNDDADACHAARTLIHRGFDNIFVLSGGLVAFAREGFQSFVEGNVEALPP 654
            ++KR+P+NPRY   +SK    + +G TV+KV  ++ ++ L+RR+E + R+T   L +L  EYE      Q E V              R  +D D+    GP++V YE + K  YD PYLVLD RT +EF   RI +A+++ A  LN+D + PE++ +KN+E  LVILY  DD  A   A TL+ RGFDNI+VL+GGLV +A E F   +EG    LPP
Sbjct:   13 MEKRIPQNPRYKNTQSK----IDSGSTVNKVRLISHKEFLKRRDETFRRITCRCLADLFGEYEDTGSASQPEMVARMVKGADGEFSMERVPVDEDNQESCGPRIVSYEAEEKEDYDPPYLVLDTRTKDEFAANRIHRAKNYPATFLNRDVLLPEMHQFKNQEAKLVILYDLDDKTAAQTAHTLVQRGFDNIYVLTGGLVDYADE-FPDHIEGT--PLPP 224          
BLAST of mRNA_Ecto-sp9_F_contig1053.495.1 vs.
Match: Rhodanese (domain-containing protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y6U1_9STRA)

HSP 1 Score: 145 bits (366), Expect = 3.220e-38
Identity = 88/227 (38.77%), Postives = 127/227 (55.95%), Query Frame = 1
Query:   10 RMGSNRGSVRANALDKRVPRNPRYAGVKSKASTAVQTGMTVDKVTFVTTRQHLRRREEPYFRLTPSQLNELLSEYEQQDQ-------------------QEGVQDFRDHIDPDHHGPKVVEYEPDAKPSYDRPYLVLDVRTPEEFKRCRIVQARSFEAKLLNQDRMTPELYMYKNREGGLVILYSNDDADACHAARTLIHRGFDNIFVLSGGLVAFAREGFQSFVEG 633
            RM   +     + ++KR+P+NPRY   +SK    V +G TV+KV  ++ ++ L+RR+E + R+T   L EL +EYE                        E V    D+   +  GP++V Y+ + K  YD PYLVLD RT EE+   RI +A+SF A  LN+D + PE++ +KN E  L+I+Y  DD  A   A  L+ RGFDN++VLSGGLV +A E F   +EG
Sbjct:   28 RMHRAKAKTPLSIMEKRIPQNPRYKNTQSK----VDSGSTVNKVRLISHKEFLKRRDETFRRVTCRCLAELFNEYEDTGSASRPEMVARMVKGANGEFTMERVPASEDNNSEESCGPRIVSYDAEEKEDYDPPYLVLDTRTKEEYAANRIHRAKSFPASYLNRDVLLPEMHQFKNNEAKLIIIYDQDDKTAGQTAHILVQRGFDNVYVLSGGLVDYADE-FPDHIEG 249          
BLAST of mRNA_Ecto-sp9_F_contig1053.495.1 vs.
Match: Rhodanese (domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CAV7_PYTIN)

HSP 1 Score: 141 bits (356), Expect = 5.050e-37
Identity = 84/217 (38.71%), Postives = 127/217 (58.53%), Query Frame = 1
Query:   49 LDKRVPRNPRYAGVKSKASTAVQTGMTVDKVTFVTTRQHLRRREEPYFRLTPSQLNELLSEYEQQD-----------------QQEGVQDFR-----DHIDPDHHGPKVVEYEPDAKPSYDRPYLVLDVRTPEEFKRCRIVQARSFEAKLLNQDRMTPELYMYKNREGGLVILYSNDDADACHAARTLIHRGFDNIFVLSGGLVAFAREGFQSFVEG 633
            ++K++P NP+YA  +SK    + +G TV+KV  ++ ++ L+RR+E + R+T   L  LL+EYE                    +++G  + +     D+   +  GP+VV Y+ + +  YD PYL+LD R  EEF   RI +A+SF A  LN+D + PE+Y +KN+E  L+ILY  D+      A TL+ RGFDNI+VL+GGLV FA E F   +EG
Sbjct:   13 MEKKIPVNPKYANTQSK----IDSGTTVNKVRLISHKEFLKRRDETFRRVTVKCLEALLAEYEDNGGCGXGCEEPEMVARMVKKEDGKFELQRVPADDNQSHNASGPRVVSYDAEEREEYDPPYLILDTRPKEEFAVNRITRAKSFPAAFLNRDTLLPEMYKFKNQESKLIILYDQDEKTVTQTAHTLVQRGFDNIYVLTGGLVDFADE-FPDRIEG 224          
BLAST of mRNA_Ecto-sp9_F_contig1053.495.1 vs.
Match: Rhodanese (domain-containing protein n=18 Tax=Phytophthora TaxID=4783 RepID=D0N5T1_PHYIT)

HSP 1 Score: 140 bits (353), Expect = 1.250e-36
Identity = 88/219 (40.18%), Postives = 130/219 (59.36%), Query Frame = 1
Query:   49 LDKRVPRNPRYAGVKSKASTAVQTGMTVDKVTFVTTRQHLRRREEPYFRLTPSQLNELLSEYEQQ---DQQEGVQ--------DF---RDHIDPDHH---GPKVVEYEPDAKPSYDRPYLVLDVRTPEEFKRCRIVQARSFEAKLLNQDRMTPELYMYKNREGGLVILYSNDDADACHAARTLIHRGFDNIFVLSGGLVAFAREGFQSFVEGNVEALPP 654
            ++KR+P+NP+Y   +SK    + +G TV+KV  ++ ++ L+RR+E + R+T   L EL +EYE      Q E V         DF   R  +  D+    GP++V YE D K  YD PYLVLD R+ EEF   RI +A+++    LN+D + PE++ +KN++  L+I+Y  DD      A TL+ RGFDNI+VL+GGL+ FA E +   +EG    LPP
Sbjct:   13 MEKRIPQNPKYKNTQSK----IDSGTTVNKVRLISHKEFLKRRDETFRRITCRCLAELFNEYEDTGGASQPEMVARMVKGPNGDFTMERVPVGEDNQESCGPRIVSYEADEKEDYDAPYLVLDTRSKEEFAANRIHRAKNYPTTFLNRDVLLPEMHQFKNQDSKLIIIYDLDDKTVAQTAHTLVQRGFDNIYVLTGGLLDFADE-YPEHIEGT--PLPP 224          
BLAST of mRNA_Ecto-sp9_F_contig1053.495.1 vs.
Match: Rhodanese (domain-containing protein (Fragment) n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4CRZ4_9STRA)

HSP 1 Score: 142 bits (359), Expect = 7.410e-36
Identity = 86/204 (42.16%), Postives = 123/204 (60.29%), Query Frame = 1
Query:   49 LDKRVPRNPRYAGVKSKASTAVQTGMTVDKVTFVTTRQHLRRREEPYFRLTPSQLNELLSEYEQQ---DQQEGVQDF-----------RDHIDPDHH---GPKVVEYEPDAKPSYDRPYLVLDVRTPEEFKRCRIVQARSFEAKLLNQDRMTPELYMYKNREGGLVILYSNDDADACHAARTLIHRGFDNIFVLSGGLVAFARE 609
            ++KR+P+NPRY   +SK    + +G TV+KV  ++ ++ L+RR+E + R+T   L +L  EYE      Q E V              R  +D D+    GP++V YE + K  YD PYLVLD RT +EF   RI +A+++ A  LN+D + PE++ +KN+E  LVILY  DD  A   A TL+ RGFDNI+VL+GGLV +A E
Sbjct:  302 MEKRIPQNPRYKNTQSK----IDSGSTVNKVRLISHKEFLKRRDETFRRITCRCLADLFGEYEDTGSASQPEMVARMVKGADGEFSMERVPVDEDNQESCGPRIVSYEAEEKEDYDPPYLVLDTRTKDEFAANRIHRAKNYPATFLNRDVLLPEMHQFKNQEAKLVILYDLDDKTAAQTAHTLVQRGFDNIYVLTGGLVDYADE 501          
BLAST of mRNA_Ecto-sp9_F_contig1053.495.1 vs.
Match: Hypothetical (protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HNL5_9STRA)

HSP 1 Score: 138 bits (347), Expect = 2.730e-35
Identity = 73/201 (36.32%), Postives = 128/201 (63.68%), Query Frame = 1
Query:   49 LDKRVPRNPRYAGVKSKASTAVQTGMTVDKVTFVTTRQHLRRREEPYFRLTPSQLNELLSEYEQQDQQEGVQDFRDHIDPDHHGPKVVEYEPDAKPSYDRPYLVLDVRTPEEFKRCRIVQARSFEAKLLNQDRMTPELYMYKNREGGLVILYSNDDADACHAARTLIHRGFDNIFVLSGGLVAFAREGFQSFVEGNVEALP 651
            +++RVP+N +Y+ ++      + TG+TV+KV F+T R++ +RR+E ++R+  +QL ELL+EYE       V ++    +  ++  K+V Y   A P Y++PYL+LDVR  + F    I+QARSF  ++L +D+M  E+Y +KN+   L+I+  +D+  +  +A+ ++ RG DN+++L+GG+  FA E +  F+EG   A P
Sbjct:   13 MERRVPKNDKYSHIRG----TLDTGLTVEKVKFITAREYSKRRDEIFYRINKNQLFELLNEYE-------VDEYESIAETTNNSLKIVSYSETAGPVYEKPYLILDVRELDYFNEYHILQARSFPYQMLRRDQMHSEVYRFKNKPETLIIICCDDEKISHESAKVMVDRGVDNVYLLTGGIHEFAYE-YPQFIEGRPPAPP 201          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1053.495.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Rhodanese7.410e-14096.31domain-containing protein n=1 Tax=Ectocarpus silic... [more]
Rhodanese3.390e-12497.06domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Rhodanese-like1.990e-6757.95domain-containing protein n=1 Tax=Tribonema minus ... [more]
Hypothetical1.620e-5446.26protein (Fragment) n=1 Tax=Fibrocapsa japonica Tax... [more]
Rhodanese5.720e-3942.01domain-containing protein n=5 Tax=Phytophthora Tax... [more]
Rhodanese3.220e-3838.77domain-containing protein (Fragment) n=2 Tax=Notho... [more]
Rhodanese5.050e-3738.71domain-containing protein n=2 Tax=Pythium insidios... [more]
Rhodanese1.250e-3640.18domain-containing protein n=18 Tax=Phytophthora Ta... [more]
Rhodanese7.410e-3642.16domain-containing protein (Fragment) n=1 Tax=Phyto... [more]
Hypothetical2.730e-3536.32protein n=1 Tax=Spumella elongata TaxID=89044 RepI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1053contigEcto-sp9_F_contig1053:12362..14920 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score407.5
Seed ortholog evalue4.5e-111
Seed eggNOG ortholog2880.D8LCI4
Preferred nameCEP41
KEGG koko:K16455
GOsGO:0000086,GO:0000226,GO:0000278,GO:0001578,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005813,GO:0005814,GO:0005815,GO:0005829,GO:0005856,GO:0005929,GO:0006464,GO:0006807,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007346,GO:0008150,GO:0008152,GO:0009987,GO:0010389,GO:0010564,GO:0015630,GO:0016043,GO:0016874,GO:0016879,GO:0016881,GO:0018095,GO:0018193,GO:0018200,GO:0019538,GO:0022402,GO:0022406,GO:0022607,GO:0030030,GO:0030031,GO:0035082,GO:0036064,GO:0036211,GO:0042995,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044450,GO:0044463,GO:0044464,GO:0044770,GO:0044772,GO:0044782,GO:0044839,GO:0050789,GO:0050794,GO:0051179,GO:0051640,GO:0051641,GO:0051726,GO:0060271,GO:0065007,GO:0070739,GO:0070740,GO:0070925,GO:0071704,GO:0071840,GO:0097711,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:0140056,GO:0140096,GO:1901564,GO:1901987,GO:1901990,GO:1902749,GO:1903047
EggNOG free text desc.protein polyglutamylation
EggNOG OGs28IWM@1,2QR8A@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRhodanese-like domain
Ec32 orthologEc-26_005150.1
Exons5
Model size771
Cds size771
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1053.495.1prot_Ecto-sp9_F_contig1053.495.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig1053 12362..14920 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928266.645479-CDS-Ecto-sp9_F_contig1053:12361..126011622928266.645479-CDS-Ecto-sp9_F_contig1053:12361..12601Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1053 12362..12601 -
1692277814.9785411-CDS-Ecto-sp9_F_contig1053:12361..126011692277814.9785411-CDS-Ecto-sp9_F_contig1053:12361..12601Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1053 12362..12601 -
1622928266.6595922-CDS-Ecto-sp9_F_contig1053:12921..130441622928266.6595922-CDS-Ecto-sp9_F_contig1053:12921..13044Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1053 12922..13044 -
1692277814.9878724-CDS-Ecto-sp9_F_contig1053:12921..130441692277814.9878724-CDS-Ecto-sp9_F_contig1053:12921..13044Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1053 12922..13044 -
1622928266.6734881-CDS-Ecto-sp9_F_contig1053:13424..135921622928266.6734881-CDS-Ecto-sp9_F_contig1053:13424..13592Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1053 13425..13592 -
1692277814.9962819-CDS-Ecto-sp9_F_contig1053:13424..135921692277814.9962819-CDS-Ecto-sp9_F_contig1053:13424..13592Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1053 13425..13592 -
1622928266.6847634-CDS-Ecto-sp9_F_contig1053:14025..141541622928266.6847634-CDS-Ecto-sp9_F_contig1053:14025..14154Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1053 14026..14154 -
1692277815.0046005-CDS-Ecto-sp9_F_contig1053:14025..141541692277815.0046005-CDS-Ecto-sp9_F_contig1053:14025..14154Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1053 14026..14154 -
1622928266.7330446-CDS-Ecto-sp9_F_contig1053:14809..149201622928266.7330446-CDS-Ecto-sp9_F_contig1053:14809..14920Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1053 14810..14920 -
1692277815.0131605-CDS-Ecto-sp9_F_contig1053:14809..149201692277815.0131605-CDS-Ecto-sp9_F_contig1053:14809..14920Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1053 14810..14920 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig1053.495.1

>prot_Ecto-sp9_F_contig1053.495.1 ID=prot_Ecto-sp9_F_contig1053.495.1|Name=mRNA_Ecto-sp9_F_contig1053.495.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=257bp
MSLRMGSNRGSVRANALDKRVPRNPRYAGVKSKASTAVQTGMTVDKVTFV
TTRQHLRRREEPYFRLTPSQLNELLSEYEQQDQQEGVQDFRDHIDPDHHG
PKVVEYEPDAKPSYDRPYLVLDVRTPEEFKRCRIVQARSFEAKLLNQDRM
TPELYMYKNREGGLVILYSNDDADACHAARTLIHRGFDNIFVLSGGLVAF
AREGFQSFVEGNVEALPPPPPAPASGGGTLRIGCGGGLRSTALSDGVGSS
SNGGGGG
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mRNA from alignment at Ecto-sp9_F_contig1053:12362..14920-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig1053.495.1 ID=mRNA_Ecto-sp9_F_contig1053.495.1|Name=mRNA_Ecto-sp9_F_contig1053.495.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=2559bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1053:12362..14920- (Ectocarpus species9 EcSCA_722f female)
ATGAGTCTCAGGATGGGATCCAACCGGGGGAGTGTAAGAGCGAACGCTCT TGACAAACGCGTCCCCCGGAATCCGCGATACGCTGGCGTCAAAAGCAAGG CAAGTACCGCTGTAAAAGGGAGTGTGGGTGGCGAGAGGGCCGAGTACTCT ACTGGTGTAGTAGAGGAATAGTGGTTGCCGTTAGTCCTTATCAAGACTTG ATAGAGGCTGACTTTGCCAGGCACAGATCAACTTACGCCCTGTGCTTAAT CCTGCCGCTTTTCGGGTTCGCGCGAGAGTCGTGTGTGGGTCGCGGGCAAC CCCAAATCCCCGAACACTCCGGCCAAAATATGCGGCGCAATTGGATGTTT GATCGTGGTAGGCGAGTACGCAGCGTCAACACTCATATGATGCGACACCG GCACACTGGCACTCGTTTGAGACACCCTCGCTGAGAAGAACTAACGCGAA AAACTATCAATTCATTTCGATCAACAAGGTGCCCCCGACTCCACAGTCGA GGTCACCCCAAGACCGTCCCCACCAGAGTGTAGCTGAGGTTGTGCAGCAG CAATAGTACCTGTCTACAAGCATGCTGAGTAAAGTGTTACTGACTGTGGT TTACTACAATGATGTACGTTTACCCGCCGCGGCCATCAGACGAAATATCG TCGCAAGTGTACTATAGTTGAGCACTCATACTGCTGTTGTTAACCTTGTA TCTTATCCCTTCTGTTCTTTGCTGCGCTGTTGTCGTGTGTGTATCGCGGC GGCGGTACACCGTCAGGTGCAGACGGGCATGACCGTCGACAAGGTGACCT TCGTCACCACACGGCAGCACCTAAGGCGGCGGGAGGAACCGTACTTCAGG CTCACGCCGTCCCAGCTGAACGAGCTCTTGAGCGAGTACGAGCAGGTGGG TGGTGTGGTGTAGCGCGGAGGGGAGGGGGAGAGAGGCACAAGACAGAATG GTACACCGATAAGTGGGATGATAGACCAAATGTATGTACCTGCAAGCAGA CAGGTGCAGAGAATATATGGAGAGCGAGTAAGAGAGCGAAGAGAGAGAGA AAAGAGCGAGAAGCATGCGCGTTTTCCATCGTGATGTTCCCAGGCGGGTA CCCGTTATGCGCGCACAAGTTGCAGTCCTCTGGCCCCGGCCCGGAGAGTA CTGTAGAGGAAGGGACGACATCGCTCGCGCTTGGGCAATCGATGATCCAA TAGCCGATAGGAGTGTGGAATACGTCAACACCCACCCAAACACCGAGAAC AACAAACGAAAACACCACCACCACCACCACCAGCAACGAAAAGCGATTGG ACCAACACCAACCAACGACGAAACGAAGCAGGACCAACAAGAGGGCGTCC AGGACTTCCGAGACCACATCGACCCCGACCACCACGGCCCCAAGGTGGTG GAGTACGAGCCCGACGCCAAGCCGAGCTACGACCGCCCCTACCTCGTCCT CGACGTCCGCACCCCCGAGGAGTTCAAGCGGTGCCGCATCGTGCAGGTGA CCTACAGTTGTAGTTGTAGTTGTTGTTGTTGTTGTTGTTGTTGTCTTGAC GTTAAAAACCGTTCCGATCTCTCTACCCAGTACCTTCATCTGTCCGTACT GATGGAACACTTGACCGGTCGATTCCCGTGGTCAGTACCTTACGCTTATG TCCTACGCCGCAACGGACATGGCAATAGACAGCATAAACGAAGCCATTCT CGTACAGCAGTACGGTGGTGGTGTACTACGATACAGCGAAATGGGGGGGG GGGGGGGCGTCATCAAGACTACCACATTTGTTGGTTGCCTTTCGCCTACT TTTTAGCCTGTTTTCCTCCCCCCCCCCGCCCCTCCCTCTTCTGCCGGCCG TACCGGGTGAACGAACGACTCGGAAGGCGCGGTCTTTCGAGGCCAAGCTG CTCAACCAGGACAGAATGACGCCGGAGCTCTACATGTACAAGAACCGGGA GGGCGGGCTGGTGATCCTCTACTCGAACGACGATGCCGATGCTTGCCACG TGAGAAATAGAAGATGGAGAGGCTGTGGCGGCGTCGTGGGCGGGCGGAGG AGAGGGCGGGGGCAAGAGTTGAAACCCTCAACCCCCCGCTCTGCCCTTCT GCGCCTCCTGCCTTGACAAGACAGTTAACGTGGTGCTTTGATTTATATTG TCATGGCTTATCTGTTTTTCAATTTTGAACCCTGTTTCCTGTCTTATCTT TTTTGAACCCTGTTTCCTGTCTCTCTCTCTTTGCGCCTCTCTCCCCGCAA TTCCTCGCCACAACCCCTTATTCACTCCCCCCCCCCCGACGCCGCTTCGC ATCCAATAACGCCCGTCAGGCCGCGAGGACCTTGATTCACAGGGGCTTCG ACAACATCTTCGTGCTCTCCGGCGGTCTGGTCGCCTTCGCGCGTGAGGGT TTCCAAAGCTTCGTGGAGGGGAACGTCGAGGCCTTGCCGCCGCCACCGCC GGCACCCGCGTCAGGGGGCGGTACCTTGCGCATTGGCTGCGGGGGGGGCT TGAGAAGTACTGCTCTATCGGACGGGGTAGGCAGCAGCAGCAACGGCGGC GGCGGCGGC
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1053:12362..14920-

>mRNA_Ecto-sp9_F_contig1053.495.1 ID=mRNA_Ecto-sp9_F_contig1053.495.1|Name=mRNA_Ecto-sp9_F_contig1053.495.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1542bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1053:12362..14920- (Ectocarpus species9 EcSCA_722f female)
ATGAGTCTCAGGATGGGATCCAACCGGGGGAGTGTAAGAGCGAACGCTCT
TGACAAACGCGTCCCCCGGAATCCGCGATACGCTGGCGTCAAAAGCAAGG
CAAGTACCGCTATGAGTCTCAGGATGGGATCCAACCGGGGGAGTGTAAGA
GCGAACGCTCTTGACAAACGCGTCCCCCGGAATCCGCGATACGCTGGCGT
CAAAAGCAAGGCAAGTACCGCTGTGCAGACGGGCATGACCGTCGACAAGG
TGACCTTCGTCACCACACGGCAGCACCTAAGGCGGCGGGAGGAACCGTAC
TTCAGGCTCACGCCGTCCCAGCTGAACGAGCTCTTGAGCGAGTACGAGCA
GGTGCAGACGGGCATGACCGTCGACAAGGTGACCTTCGTCACCACACGGC
AGCACCTAAGGCGGCGGGAGGAACCGTACTTCAGGCTCACGCCGTCCCAG
CTGAACGAGCTCTTGAGCGAGTACGAGCAGCAGGACCAACAAGAGGGCGT
CCAGGACTTCCGAGACCACATCGACCCCGACCACCACGGCCCCAAGGTGG
TGGAGTACGAGCCCGACGCCAAGCCGAGCTACGACCGCCCCTACCTCGTC
CTCGACGTCCGCACCCCCGAGGAGTTCAAGCGGTGCCGCATCGTGCAGCA
GGACCAACAAGAGGGCGTCCAGGACTTCCGAGACCACATCGACCCCGACC
ACCACGGCCCCAAGGTGGTGGAGTACGAGCCCGACGCCAAGCCGAGCTAC
GACCGCCCCTACCTCGTCCTCGACGTCCGCACCCCCGAGGAGTTCAAGCG
GTGCCGCATCGTGCAGGCGCGGTCTTTCGAGGCCAAGCTGCTCAACCAGG
ACAGAATGACGCCGGAGCTCTACATGTACAAGAACCGGGAGGGCGGGCTG
GTGATCCTCTACTCGAACGACGATGCCGATGCTTGCCACGCGCGGTCTTT
CGAGGCCAAGCTGCTCAACCAGGACAGAATGACGCCGGAGCTCTACATGT
ACAAGAACCGGGAGGGCGGGCTGGTGATCCTCTACTCGAACGACGATGCC
GATGCTTGCCACGCCGCGAGGACCTTGATTCACAGGGGCTTCGACAACAT
CTTCGTGCTCTCCGGCGGTCTGGTCGCCTTCGCGCGTGAGGGTTTCCAAA
GCTTCGTGGAGGGGAACGTCGAGGCCTTGCCGCCGCCACCGCCGGCACCC
GCGTCAGGGGGCGGTACCTTGCGCATTGGCTGCGGGGGGGGCTTGAGAAG
TACTGCTCTATCGGACGGGGTAGGCAGCAGCAGCAACGGCGGCGGCGGCG
GCGCCGCGAGGACCTTGATTCACAGGGGCTTCGACAACATCTTCGTGCTC
TCCGGCGGTCTGGTCGCCTTCGCGCGTGAGGGTTTCCAAAGCTTCGTGGA
GGGGAACGTCGAGGCCTTGCCGCCGCCACCGCCGGCACCCGCGTCAGGGG
GCGGTACCTTGCGCATTGGCTGCGGGGGGGGCTTGAGAAGTACTGCTCTA
TCGGACGGGGTAGGCAGCAGCAGCAACGGCGGCGGCGGCGGC
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