mRNA_Ecto-sp9_F_contig10510.482.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig10510.482.1 vs.
Match: Protein-S-isoprenylcysteine (O-methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1X4_ECTSI) HSP 1 Score: 215 bits (547), Expect = 7.560e-67 Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 1
Query: 1 AFVLNHSKEYTGALLASWAEFGLEAFLLPELKRQPAVVAAGVALALIGHWFRVGAMWTAGSNFNHEIMQRREESHQLVTRGVYRFLRHPSYFGWFWWSLGTQ 306
+FVLNHSKEYTGALLASWAEFGLEAFLLPELKRQPAVVAAGVALALIGHWFRVGAMWTAGSNFNHEIMQRREESHQLVTRGVYRFLRHPSYFGWFWWSLGTQ
Sbjct: 93 SFVLNHSKEYTGALLASWAEFGLEAFLLPELKRQPAVVAAGVALALIGHWFRVGAMWTAGSNFNHEIMQRREESHQLVTRGVYRFLRHPSYFGWFWWSLGTQ 194
BLAST of mRNA_Ecto-sp9_F_contig10510.482.1 vs.
Match: Protein-S-isoprenylcysteine (O-methyltransferase (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFN7_9PHAE) HSP 1 Score: 214 bits (544), Expect = 1.380e-65 Identity = 100/102 (98.04%), Postives = 102/102 (100.00%), Query Frame = 1
Query: 1 AFVLNHSKEYTGALLASWAEFGLEAFLLPELKRQPAVVAAGVALALIGHWFRVGAMWTAGSNFNHEIMQRREESHQLVTRGVYRFLRHPSYFGWFWWSLGTQ 306
+FVLNHSKEYTGALLASWAEFGLEAFLLPELKRQPAVVAAGVALALIGHWFRVGAMWTAGSNFNHEIMQRRE+SHQLVTRGVYRFLRHPSYFGWFWWSLGTQ
Sbjct: 93 SFVLNHSKEYTGALLASWAEFGLEAFLLPELKRQPAVVAAGVALALIGHWFRVGAMWTAGSNFNHEIMQRREQSHQLVTRGVYRFLRHPSYFGWFWWSLGTQ 194
BLAST of mRNA_Ecto-sp9_F_contig10510.482.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CFM5_PYTOL) HSP 1 Score: 126 bits (317), Expect = 4.010e-32 Identity = 55/102 (53.92%), Postives = 72/102 (70.59%), Query Frame = 1
Query: 1 AFVLNHSKEYTGALLASWAEFGLEAFLLPELKRQPAVVAAGVALALIGHWFRVGAMWTAGSNFNHEIMQRREESHQLVTRGVYRFLRHPSYFGWFWWSLGTQ 306
+F+LNHSKEY AL+ SW EF L+ +L+P K P V GV L + G W R+ AMWTA SNF+H I + + H LVT G+YRF+RHPSY GWF+W++G+Q
Sbjct: 85 SFLLNHSKEYHLALVVSWVEFWLQVWLVPSWKANPTVFTTGVVLVVFGQWCRILAMWTAASNFSHRIEYIKRKEHVLVTHGIYRFIRHPSYTGWFFWTMGSQ 186
BLAST of mRNA_Ecto-sp9_F_contig10510.482.1 vs.
Match: Protein-S-isoprenylcysteine (O-methyltransferase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1W5_9STRA) HSP 1 Score: 127 bits (318), Expect = 5.130e-32 Identity = 63/126 (50.00%), Postives = 76/126 (60.32%), Query Frame = 1
Query: 1 AFVLNHSKEYTGALLASWAEFGLEAFLLPELKRQPAVVAAG------------------------VALALIGHWFRVGAMWTAGSNFNHEIMQRREESHQLVTRGVYRFLRHPSYFGWFWWSLGTQ 306
AF++NHSKEYT A +ASW EF +E F P LK + AG + L L+G R GAMWTAGSNFNH I ++E+ HQLVT G+YR+LRHPSYFGWFWWS+G Q
Sbjct: 87 AFIINHSKEYTVAAIASWIEFWVERFTFPGLKLAGFQLGAGXXXXXXXXEATWWMYGACILSGLGLVLVLVGQACRSGAMWTAGSNFNHVIATKKEKEHQLVTHGLYRYLRHPSYFGWFWWSIGLQ 212
BLAST of mRNA_Ecto-sp9_F_contig10510.482.1 vs.
Match: Protein-S-isoprenylcysteine (O-methyltransferase n=2 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9YAN0_9STRA) HSP 1 Score: 125 bits (315), Expect = 7.370e-32 Identity = 55/102 (53.92%), Postives = 74/102 (72.55%), Query Frame = 1
Query: 1 AFVLNHSKEYTGALLASWAEFGLEAFLLPELKRQPAVVAAGVALALIGHWFRVGAMWTAGSNFNHEIMQRREESHQLVTRGVYRFLRHPSYFGWFWWSLGTQ 306
+F+LNHS Y AL SWAE+ LEA+ P K P + AG+ L ++G +FRVGAMWTA SNF+H I + + HQL+T G+Y ++RHPSYFGWF+WS+G+Q
Sbjct: 83 SFLLNHSDAYQMALFTSWAEYWLEAYFFPASKFSPFFMWAGLGLIVMGQFFRVGAMWTAKSNFSHRIEIAKRKDHQLITHGLYTYIRHPSYFGWFYWSIGSQ 184
BLAST of mRNA_Ecto-sp9_F_contig10510.482.1 vs.
Match: Protein-S-isoprenylcysteine (O-methyltransferase n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A814GZD0_9BILA) HSP 1 Score: 126 bits (316), Expect = 1.760e-31 Identity = 57/102 (55.88%), Postives = 75/102 (73.53%), Query Frame = 1
Query: 1 AFVLNHSKEYTGALLASWAEFGLEAFLLPELKRQPAVVAAGVALALIGHWFRVGAMWTAGSNFNHEIMQRREESHQLVTRGVYRFLRHPSYFGWFWWSLGTQ 306
+F+LNHSKEY A L+SW EF LEA + P +K + G+ L L G +FR AM+TAG+NFNH + + R++ H LVT+GVYR +RHPSYFGWF+WS+GTQ
Sbjct: 123 SFLLNHSKEYAIAALSSWTEFFLEALIFPSIKHNLYLRFTGLFLCLFGEFFRKLAMYTAGTNFNHFVQETRQKDHVLVTKGVYRLVRHPSYFGWFYWSIGTQ 224
BLAST of mRNA_Ecto-sp9_F_contig10510.482.1 vs.
Match: Protein-S-isoprenylcysteine (O-methyltransferase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CQM9_SAPPC) HSP 1 Score: 122 bits (306), Expect = 1.590e-30 Identity = 51/102 (50.00%), Postives = 74/102 (72.55%), Query Frame = 1
Query: 1 AFVLNHSKEYTGALLASWAEFGLEAFLLPELKRQPAVVAAGVALALIGHWFRVGAMWTAGSNFNHEIMQRREESHQLVTRGVYRFLRHPSYFGWFWWSLGTQ 306
+F+LNHS Y AL SW E+ +EA+ P+ K +P + G+ L ++G +FRVGAMWTA SNF+H I + + H+L+T G+Y ++RHPSYFGWF+WS+G+Q
Sbjct: 83 SFLLNHSDAYQVALFTSWVEYWVEAYFFPDAKFRPLFMWLGLLLVVMGQFFRVGAMWTAKSNFSHRIEIAKRKDHELITHGLYTYIRHPSYFGWFYWSIGSQ 184
BLAST of mRNA_Ecto-sp9_F_contig10510.482.1 vs.
Match: Protein-S-isoprenylcysteine (O-methyltransferase (Fragment) n=1 Tax=Micrurus surinamensis TaxID=129470 RepID=A0A2D4PLV5_MICSU) HSP 1 Score: 121 bits (303), Expect = 2.180e-30 Identity = 55/102 (53.92%), Postives = 75/102 (73.53%), Query Frame = 1
Query: 1 AFVLNHSKEYTGALLASWAEFGLEAFLLPELKRQPAVVAAGVALALIGHWFRVGAMWTAGSNFNHEIMQRREESHQLVTRGVYRFLRHPSYFGWFWWSLGTQ 306
+F+LNHS EY A L+SW EF +E F+ PELK+ + +AG+ + ++G + R AM TAGSNFNH + + ESH+LVT+GVY + RHPSY GWF+WS+GTQ
Sbjct: 48 SFLLNHSFEYNVAALSSWFEFTVEKFIFPELKQVGWLSSAGLLMVVLGDFLRKAAMLTAGSNFNHIVQNEKSESHRLVTQGVYGWCRHPSYVGWFYWSIGTQ 149
BLAST of mRNA_Ecto-sp9_F_contig10510.482.1 vs.
Match: Protein-S-isoprenylcysteine (O-methyltransferase (Fragment) n=1 Tax=Stegodyphus mimosarum TaxID=407821 RepID=A0A087TI94_STEMI) HSP 1 Score: 120 bits (301), Expect = 2.460e-30 Identity = 56/102 (54.90%), Postives = 69/102 (67.65%), Query Frame = 1
Query: 1 AFVLNHSKEYTGALLASWAEFGLEAFLLPELKRQPAVVAAGVALALIGHWFRVGAMWTAGSNFNHEIMQRREESHQLVTRGVYRFLRHPSYFGWFWWSLGTQ 306
+F+LNHSKEY A L SW EF +E + P K V A G+ L ++G R GAM+TAG+NFNH I REE H LV+ G+Y + RHPSY GWFWWS+GTQ
Sbjct: 27 SFLLNHSKEYGIAALCSWMEFFVEWYFFPHWKELRWVTAVGLFLCIVGELVRKGAMFTAGTNFNHIIQSHREEGHVLVSHGLYAWCRHPSYVGWFWWSVGTQ 128
BLAST of mRNA_Ecto-sp9_F_contig10510.482.1 vs.
Match: Protein-S-isoprenylcysteine (O-methyltransferase n=1 Tax=Brachionus plicatilis TaxID=10195 RepID=A0A3M7Q7Z6_BRAPC) HSP 1 Score: 123 bits (308), Expect = 2.900e-30 Identity = 56/102 (54.90%), Postives = 73/102 (71.57%), Query Frame = 1
Query: 1 AFVLNHSKEYTGALLASWAEFGLEAFLLPELKRQPAVVAAGVALALIGHWFRVGAMWTAGSNFNHEIMQRREESHQLVTRGVYRFLRHPSYFGWFWWSLGTQ 306
+F+LNHSKEY A +SW+EF +EA L P LK+ + G++L L G FR AM+TAG NFNH + + + H LVT+GVYR +RHPSYFGWF+WS+GTQ
Sbjct: 127 SFLLNHSKEYAIAAFSSWSEFFIEAILFPTLKQNLYLRCIGLSLCLFGESFRKLAMYTAGKNFNHYVQETHHKEHVLVTKGVYRLVRHPSYFGWFYWSIGTQ 228 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10510.482.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig10510.482.1 >prot_Ecto-sp9_F_contig10510.482.1 ID=prot_Ecto-sp9_F_contig10510.482.1|Name=mRNA_Ecto-sp9_F_contig10510.482.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=140bp AFVLNHSKEYTGALLASWAEFGLEAFLLPELKRQPAVVAAGVALALIGHWback to top mRNA from alignment at Ecto-sp9_F_contig10510:140..2679+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig10510.482.1 ID=mRNA_Ecto-sp9_F_contig10510.482.1|Name=mRNA_Ecto-sp9_F_contig10510.482.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=2540bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10510:140..2679+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig10510:140..2679+ >mRNA_Ecto-sp9_F_contig10510.482.1 ID=mRNA_Ecto-sp9_F_contig10510.482.1|Name=mRNA_Ecto-sp9_F_contig10510.482.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=840bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10510:140..2679+ (Ectocarpus species9 EcSCA_722f female)back to top |