mRNA_Ecto-sp9_F_contig1051.481.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig1051.481.1 vs.
Match: TRAF-type (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KHQ1_9PHAE) HSP 1 Score: 2027 bits (5252), Expect = 0.000e+0 Identity = 1086/1257 (86.40%), Postives = 1112/1257 (88.46%), Query Frame = 1
Query: 1 MVRRKEPAQEPDGAMPLPPAADVKRPDHP-------LRSGKIAIWPYVMRDLPLSPVEAFRSELQSTSRNEASSPSALTAGTRHGVEYFPSCLTDEGAARQIEQEQGPRTDSDLGGLKAKPLGAGDEPPIMARTGHSAVAPAKQATKSNALPNGPDGRGRHLPSNRLRRPSTGGPSRRPPVAPLAEAVSSLPHRGTWDRIECPSGCGEELRVTDLRHHQASLCALRYVSCLMPGCSTLVQARQLRLHLSRDCLKRKEQRVLAKKGKALDDEIACKACNERFLRKXXXXXXXXXXQMRMVQCPNCTEMMQARSLADHQRLDCKTAKQKGALYEQAASRPTEIECGACHGTVVTTQLRRHTSDECPSRVVACPNKYLGCGEELPASDVAYHLRKQCAVSITREDRAAKHLFRRQRVQCSGCGYWTLLQDLPRHHREKCPNRRVPCKHWELGCPAMLRLSAMDDHFKVDRLLDPRACLAFDGGRAYITLGESDRKPPWTAEMWVWRPGLVEGTREKTRTALKALWEFHQARGKLAITERRLALLEPLLVDVATRAAKERSEEAAKTRDKLTDEMIAAATVRDDAKVDLVVSVVVLSNSVASAARGVEELTAQDRLRGFDRLALGSTPWYAASPGPSRAGFGPDGRIRGVNQSLGAGKAVVESKEVVGEENMPLGTAADSPKSPTGLGTAPTQDETAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGQPSAQATNSIPVGHDGVVAGSGGASGNDEDDIDSMLLNISKEQQAFEASEEAKLRKNEAVFWAEWIALTGPSLARRVLALEAETLPRLKEEAVAITGKANEALFDTRGDATAEGVEEEVPDEEGGARAHESSTSPNQGGKHRKAAKKAKRKQKHEKHYGKSIETRIAEEVGRRGGVETLLGSDKVLFQLEMGPKERIGIKIAGKKDQIFNYRCPRERWVHLAFVSDSTGVFLMEDGKTASRLRDITVPLPMREIGGRETACQCLLQEVRYWKVKRRKEDVVEWMHQVLPGTAKDDGLIGYWTFEEGVGEHVNDVTEQRFRARMIGRGLKWAFSENMNTVEVAPPPTPSWREQNVCKVELRRGRLAQRGRLHRQVV--------SHLDEDCVAHRAW---MRMAETGQELQESCTC----------------------------------PHCGETVRRSQLKLHFQYQCHWFKEQCRNAGCGAWVPRLRRAEHERRFCGDSSAVRRRRRLARARARSTYQRDWAQDEE 3615
MVRRKEPAQEPDGAMP PPAADV+RPDHP RSGKI+IWPYVMRDLPLSPVEAFRSELQST+RNEASSPSALTAGTRH VEYF SCLT EGA RQ+EQEQGPRTDSDLGGL+A+ LGAGDEPP++ARTGHSAVAPAKQAT +NALPNGPDGRGRHLPSNRLRRPSTGGPSRRPPVAPLAEAVSSL HRGTWDRIECPSGCGEEL VTDLRHH ASLCALRYVSC MPGCSTLVQARQLRLHL RDC KRKEQRVLAK GKALDDEIACKACNERF RK Q+RMVQCPNC EMMQARSLADHQR DCKTAKQKGAL+EQAASRPTEIECGACHGTVVTTQLRRHTSDECPSRVVACPNKYLGCGEELPA DVAYHLRKQCAV+ITREDRAAKHLFRRQRVQCSGCGYW + QDLPRHHREKCPNRRVPCKHWELGCPAMLRLSAMDDH KVDRLLDPRACLAFDGGRAYITLGESDRKPPWTAEMWVWRPGLVEGTREKTRTALKALWEFHQARGKLAITERRLALLEPLLVDVATRAAKERSEEAAKTRDKLTDEMIAAATVRDDAKVDLVVSVVVLSNSVASAARGVEELTAQDRLRG DRLALGSTPWY+ASPGPSRAGF D IR VNQSLGAGK VVESKEV+GEEN PLGT A+SPKSPTGLGTAPT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DGQPSAQ TNSIP+ DGVVAGSGGASGND+DDIDSMLLNISKEQQAFEASEEAKLR N+AVFWAEWIALTGPSLARRVL L+AETLPRLKEEAVAITG ANEALFDTRGDATAEGVEE VPDEEGGARAH+S TSP QGGKH+KAA HYGKSI TRIAEEVGRRGGVETLLGSDKVLFQLEMGPKERIGIKIAGKKD IFNYRCPRERWVHLAFVSDSTGVFLMEDGKTASRLRDITVPLPMREIGGRETACQCLLQEVRYWKVKR KEDVVEWMHQVLPGTAK+DGLIGYWTFEEGVGEHVNDVTEQRFRARMIGRGLKWAFSENMN VEVAPPPTPSWREQNVCKVELRRGRLAQRGRLHRQVV S L D AH A+ +R+ PHCGETVRRSQLKLHFQYQCHWFKEQCRNAGCGAWVPRLRRAEHERRFC DSSAVRRRRRLARARARSTYQRDWAQDEE
Sbjct: 1 MVRRKEPAQEPDGAMPRPPAADVERPDHPPVNVDHLRRSGKISIWPYVMRDLPLSPVEAFRSELQSTTRNEASSPSALTAGTRHCVEYFRSCLTGEGATRQMEQEQGPRTDSDLGGLEAELLGAGDEPPVVARTGHSAVAPAKQATNNNALPNGPDGRGRHLPSNRLRRPSTGGPSRRPPVAPLAEAVSSLQHRGTWDRIECPSGCGEELWVTDLRHHHASLCALRYVSCFMPGCSTLVQARQLRLHLRRDCFKRKEQRVLAKNGKALDDEIACKACNERFPRKQMRMHLATDCQIRMVQCPNCMEMMQARSLADHQRFDCKTAKQKGALHEQAASRPTEIECGACHGTVVTTQLRRHTSDECPSRVVACPNKYLGCGEELPALDVAYHLRKQCAVAITREDRAAKHLFRRQRVQCSGCGYWVVCQDLPRHHREKCPNRRVPCKHWELGCPAMLRLSAMDDHLKVDRLLDPRACLAFDGGRAYITLGESDRKPPWTAEMWVWRPGLVEGTREKTRTALKALWEFHQARGKLAITERRLALLEPLLVDVATRAAKERSEEAAKTRDKLTDEMIAAATVRDDAKVDLVVSVVVLSNSVASAARGVEELTAQDRLRGLDRLALGSTPWYSASPGPSRAGFCRDEGIRSVNQSLGAGKTVVESKEVIGEENRPLGTVAESPKSPTGLGTAPTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQDDGQPSAQVTNSIPLDPDGVVAGSGGASGNDKDDIDSMLLNISKEQQAFEASEEAKLRMNKAVFWAEWIALTGPSLARRVLGLQAETLPRLKEEAVAITGIANEALFDTRGDATAEGVEEGVPDEEGGARAHKSGTSPKQGGKHKKAAXXXXXXXXXXXHYGKSIGTRIAEEVGRRGGVETLLGSDKVLFQLEMGPKERIGIKIAGKKDHIFNYRCPRERWVHLAFVSDSTGVFLMEDGKTASRLRDITVPLPMREIGGRETACQCLLQEVRYWKVKRPKEDVVEWMHQVLPGTAKNDGLIGYWTFEEGVGEHVNDVTEQRFRARMIGRGLKWAFSENMNIVEVAPPPTPSWREQNVCKVELRRGRLAQRGRLHRQVVPCKAGCGESFLKRDAKAHAAYRCVLRVVTCSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPHCGETVRRSQLKLHFQYQCHWFKEQCRNAGCGAWVPRLRRAEHERRFCSDSSAVRRRRRLARARARSTYQRDWAQDEE 1257
BLAST of mRNA_Ecto-sp9_F_contig1051.481.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWB7_9STRA) HSP 1 Score: 351 bits (901), Expect = 4.060e-97 Identity = 341/1093 (31.20%), Postives = 458/1093 (41.90%), Query Frame = 1
Query: 580 ECPSGCGEEL--RVTDLRHHQASLCALRYVSCLMPGCSTLVQARQLRLHLSRDCLKRKEQRVLAKKGKALDDEIACKACNERFLRKXXXXXXXXXXQMRMVQC--PNCTEMMQARSLADHQRLDCKTAKQKGALYEQAASRPTEIECGACHGTVVTTQLRRHTSDECPSRVVACPNKYLGCGEELPASDVAYHLRKQCA---------------------------VSITREDRAAKHLFRRQRVQCSGCGYWTLLQDLPRHHREKCPNRRVPCKHWELGCPAMLRLSAMDDHFKVDRLLDPRACLAFDGGRAYITLGESDRKPPWTAEMWVWRPGLVEGTREKTRTALKALWEFHQARGKLAITERRLALLEPLLVDVATRAAKERSEEAAKTRDKLTDEMIAAATVRDDAKVDLVVSVVVLSNSVASAARGVEELTAQDRLRGFDRLALGSTPWYAASPGPSRAGFGPDGRIRGVNQSLGAGKAVVESKEVVGEENMPLGTAADSPKSPTGLGTAPTQDETAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGQPSAQATNSIPVGHDGVVAGSGGASGNDEDDIDSMLLNISKEQQAFEASEEAKLRKNE----AVFWAEWIALTGP-SLARRVLALEAETLPRLKEEAVAITGKANEALFDTRGDATAEGVEEEVPDEEGGARAHESSTSPNQGGKHRKAAKKAKRKQKHEKHYGKSIETRIAEEVGRRGGVETLLGSDKVLFQLEMGPKERIGIKIAGKKDQIFNYRCPRERWVHLAFVSDSTGVFLMEDGKTASRL----RDITVPLPMREIGGRETACQCLLQEVRYWKVKRRKEDVVEWMHQVLPGTAKDDGLIGYWTFEEGVGEHVNDVTEQRFRARMIGRGLKWAFSENMNTVEVAPPPTPSWREQNVCKVELRRGRLAQRGRLHRQVVS----------------HLDEDCVA-----------------------------HRAWMRMAETGQELQESCTCPHCGETVRRSQLKLHFQYQ-CHWFKEQCRNAGCGAWVPRLRRAEHERRFCGDSSAVRRRRRLARARARSTYQRDW 3600
+CP GCG ++ R LR H + CA R V+C GC LVQAR L LH + +C +R LA++ +A + +A ER R+ +R+++C C + A ++A+H C + AA+RP + C CH V LR H +CP R+V CP+ GCG E+ A D+ HL C+ V R++RA + L R Q QC CG Q L H +CPNR VPCKHWELGC A +RL M H VD R CL GG+AY+ LGE D PPWTAE WV+R LV+ RE+ R L+ +W + + ++A LE L RAA + S A ++TD +I AA RDD + + V+ S A + + +RG L S P A +P G + G TQ A XXXXXXXXXXXXXXXXXXXXXXXXXXX A +G A ND D I A +WA W+AL G ++AR A+ A L R++ A + ++ A + G + RI + + TL GS+ L L++G + R+G+ G+++ + N+ CPRERWVHLA + T + L +DG++ RL D+ LPM GG CLLQE+RYW V+R +++ MHQ+LP A DGL+GYWTFEEG G + DVT QR RA M G + WA SE E PPTPSW+E++VC VE+RR RLA RGR H + HL C H+A +A G +++ TC C R L LH Q + C W C C + R H RFC +A+ RR ++AR R R Y+R W
Sbjct: 172 QCPQGCGCDVPARGPALRRHLGAECASRVVTCPELGCGALVQARSLPLHAAAECAAAARRRALAQRAEAA---ASTRADRERHAREACP--------LRLLRCGAAGCGAAVTAGAMAEHVATVCAATLASRRVLAAAAARPKHVRCSGCHAAVAVDALRWHVEQDCPQRLVVCPHAESGCGAEVAACDLPAHLLHDCSGDDDVLYXXXXXXXXXXXXXXXXXXXRVKRERDERADRSLERMQMTQCRACGRRLQAQRLRAHALLRCPNRVVPCKHWELGCRARVRLGDMCAHLAVDAARR-RPCLLLGGGQAYVHLGERDVPPPWTAEFWVYRLPLVDEVREQMRETLQEVWRYQEGVRMQEAATAQIAALEETL-----RAATDLSARA-----EVTDALIRAAGQRDDGLLIMAVA--------CSRADALSKAV----MRGLATLRS-SKPSIATTP---------------TXXXXXXXXXXXXXXXXXGHASSTYGWW--------------TQMSLARTCTAVYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNATAAAGSAM-NDADAISGSTXXXXXXXXXXXXXXXXXXXXXXXAAPADYWAPWLALCGTDTVARFEQAVVAAELQRMR--ASVVPSLSDGACQGSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------XXXGLNARIKQALHCTSCQGTLAGSEGTLLGLQVGEQGRVGVVTIGRREFVLNHACPRERWVHLAVTASETALELFQDGRSVDRLPLDASDVPA-LPMGHFGGTRGTAACLLQEIRYWAVQRGPKELEHSMHQLLPDNATHDGLLGYWTFEEGEGVYTFDVTAQRPRAVMAGAAVAWAASEAQ---ERGDPPTPSWQERHVCAVEMRRARLALRGRAHLLIAPCPRACGQEVAMKDLRLHLARQCTRREVTCTQPGCXXXXXXXXXXXXXXXXXXPHKAMCALAAKGDMQRDTVTCDQCHAQYPRK-LHLHHQREACEWRLVHCHL--CEVLMATNRVERHVARFCRAEAALVRRAQVARGRQRWPYERPW 1171
BLAST of mRNA_Ecto-sp9_F_contig1051.481.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEM0_9PHAE) HSP 1 Score: 145 bits (366), Expect = 1.650e-36 Identity = 65/74 (87.84%), Postives = 65/74 (87.84%), Query Frame = 1
Query: 3286 VVSHLDEDCVAHRAWMRMAETGQELQESCTCPHCGETVRRSQLKLHFQYQCHWFKEQCRNAGCGAWVPRLRRAE 3507
V HLDEDCVAHRAWMRMAE G ELQESCTCPHCGETVRRSQL LHFQYQCHWFKEQ R AGCGAWVPR RAE
Sbjct: 82 VSRHLDEDCVAHRAWMRMAEAGHELQESCTCPHCGETVRRSQLTLHFQYQCHWFKEQRRKAGCGAWVPRQCRAE 155
BLAST of mRNA_Ecto-sp9_F_contig1051.481.1 vs.
Match: Hypothetical (protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WY99_9STRA) HSP 1 Score: 139 bits (349), Expect = 1.880e-29 Identity = 118/404 (29.21%), Postives = 170/404 (42.08%), Query Frame = 1
Query: 2647 SIETRIAEEVGRR----GGVETLLGSDKVLFQLEMGPKER-----------IGIKIAGKKDQ-IFNYRCPRERWVHLAFVSDSTG------VFLMEDGKTASR---LRDITVPLPMREIGGRETACQC----LLQEVRYWKVKRRKEDVVEWMHQVLPGTAKDDGLIGYWTFEEGVGEHVNDVTEQRFRARMIGRGLKWAFSENMNTVEVAPP------PTPSWREQNVCKVELRRGRLAQRGRL------------------------------------------------HRQVVSHLDEDC--VAHRAWMRMAETGQELQESCTCPHCGETVRRSQLKLHFQYQCHWFKEQCRNAGCGAWVPRLRRAEHERRFCGDSSAVRRRRRLARARARSTYQRDWA 3603
S+E R+ + + R G + LL LE+ P E G+ + GK+ + + PRERW+H+AFV + G + L DG +A ++++ + LPMR+ GG + LL E RYWK R +++VE+MH++ P G++G+WTFEEG G + D +E R+R+R+ G W +E V A P PTP+ RE VC VELR RLA++ R HR + DC VA R + G ++ C CG + + H + +C C NAGCGA V R +H FC D V RRR + + RA Y R WA
Sbjct: 721 SVEKRVKDTILREDVAAAGTDVLLAGRDFRLCLEVPPAEAGAEPSDAWRGVPGVHVRGKRTTPLSDKSVPRERWLHVAFVCRAAGDEPRPRLELFVDGASAGAPVAVKNLELKLPMRDFGGDRDSVDAGFHGLLLEARYWKGARSPQELVEYMHRLPPADRLQQGMVGWWTFEEGEGRYAFDRSELRYRSRIQGG---WRETEPEKRVAWATPFGDAGAPTPASREAGVCPVELRLVRLAEKARRALELIPCERCGAEVLTHGMRAHVRNHCVFREVPCDLCGKLVVFKDRLRHRYPAEGEEADCPVVAQRDALAARHAGGDVVTECRLG-CGARLPKRDRARHEKERCRLRPATCPNAGCGAVVAFERLRDHVANFCEDPYFVARRRMIRKYRAIRKYGRPWA 1120
BLAST of mRNA_Ecto-sp9_F_contig1051.481.1 vs.
Match: Aste57867_18496 (protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LAH1_9STRA) HSP 1 Score: 105 bits (262), Expect = 3.110e-19 Identity = 71/191 (37.17%), Postives = 95/191 (49.74%), Query Frame = 1
Query: 2689 GVETLLGSDKVLFQLEMGPKERIGIKIAGKKDQIFNYRCPRERWVHLAFVSDSTGVFLMEDGKTASRLRDITVPLPMREIGGRETACQCLLQEVRYWKVKRRKEDVVEWMHQVLPGTAKDDGLIGYWTFEEGVGEHVNDVTEQRFRARMIGRGLKWAFSENMNTVEVAPPPTPSWREQNVCKVELRRGRLA 3261
G T+ S L M G+ K+ F PR RWVH+AF + + V L D A + T LPM IG E A + LQEVRYW R K+D+ MH+VL TA L GYWTFEEG+G+ V+D+ + R+ +W + PPTPS+R++N+C+V RR LA
Sbjct: 630 GFHTIASSTTSGIHLVMASTGSPGLHSFDKRAH-FQADLPRARWVHVAFNATALSVVLFVDAVKADEAKG-TFQLPMECIGADEKAFRGYLQEVRYWSETRSKDDLTHAMHEVLDPTAT---LRGYWTFEEGLGDFVDDMACRIPRSPCFH--TEWIHYSIEIMQLLGDPPTPSFRQRNMCQVVTRRNFLA 813
BLAST of mRNA_Ecto-sp9_F_contig1051.481.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GPA3_PHYRM) HSP 1 Score: 97.4 bits (241), Expect = 8.670e-17 Identity = 85/297 (28.62%), Postives = 128/297 (43.10%), Query Frame = 1
Query: 2656 TRIAEEVGRRGGVETLLGSDKVLFQLEMGPK-ERIGIKIAGKK---DQIFNYRCPRERWVHLAFVSDSTGVFLMEDGKTASRLRDITVPLPMREIGGRETA--CQCLLQEVRYWKVKRRKEDVVEWMHQVLPGTAKDDGLIGYWTFEEGVGEHVNDVTEQRFRARMIGRGLKWAFSENMNTVE-VAPPPTPSWREQNVCKVELRRGRLAQRGRLHRQVVSHLDEDCVAHRAWMRMAETGQELQESCTCPHCGETVRRSQLKLHFQYQCHWFKEQCRNAGCGAWVPRLRRAEHERRFC 3525
T++ E GR + S K + L GPK E I + +G K D F R R RW H+ F + + + L +G+ + R + LPM IG ++ + Q + EVRYWK R E + + +L AK L+GYWTFEEG+G+ V+D++ + R+ + W ++ + PPTPS R+Q C V + LAQR R +EL+ HC + V L+ H + +C C+ GC +EH R C
Sbjct: 443 TQLLERCGRH----IIASSTKNVISLVAGPKGEVIFYRPSGAKAARDVNFQVRLERNRWNHVVFSAGAKELSLFLNGELRTTRRGV-FDLPMSRIGSKDKSESFQGFIHEVRYWKESRTIEQIRQTAASILH-VAKCKSLLGYWTFEEGLGDLVDDMSLKLPRSACLE--TNWVTYDSPQVRKRFGLPPTPSLRDQTCCVVNQKLKLLAQRAR-------------------------DRELEVVPCRQHCEQVVASRHLESHHRAECVHRMVVCKEVGCDQVFRLSDESEHLRTKC 706
BLAST of mRNA_Ecto-sp9_F_contig1051.481.1 vs.
Match: Uncharacterized (protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WPA9_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 9.060e-17 Identity = 87/299 (29.10%), Postives = 129/299 (43.14%), Query Frame = 1
Query: 2656 TRIAEEVGRRGGVETLLGSDKVLFQLEMGPKERI------GIKIAGKKDQIFNYRCPRERWVHLAFVSDSTGVFLMEDGKTASRLRDITVPLPMREIGGRET--ACQCLLQEVRYWKVKRRKEDVVEWMHQVLPGTAKDDGLIGYWTFEEGVGEHVNDVTEQRFRARMIGRGLKWAFSENMNTVE-VAPPPTPSWREQNVCKVELRRGRLAQRGRLHRQVVSHLDEDCVAHRAWMRMAETGQELQESCTCPHCGETVRRSQLKLHFQYQCHWFKEQCRNAGCGAWVPRLRRAEHERRFC 3525
T++ E GR + S + + L G K I G K A +D F R R RW H+ F + + + L +G+ + R + LPM IG +E + Q +QE+RYWK R ++ + ++ +L AK L+GYWTFEEG+G+ V+D+ +R R+ +W ++ + PPTPS R+Q C + R LAQR R D D V R C + V QL+ H + +C CR GCG +H R C
Sbjct: 799 TQLLERCGRH----IIASSARNVISLVAGAKGEIAFYRPSGAKAA--RDVNFQTRLERNRWSHVVFSAGAKELSLFVNGELKTIRRGV-FDLPMGHIGTKEKTESFQGFVQEIRYWKECRSRQQIQQYASSIL-SVAKCKNLVGYWTFEEGMGDLVDDMALKRPRSACFN--TQWVLYDSPAVRKRFGIPPTPSLRDQTSCIINQRLKLLAQRAR-------DRDLDVVPCRQL------------------CEQLVAFRQLERHHRIECVNRVVVCREFGCGQLYRFAEETQHLRTTC 1062
BLAST of mRNA_Ecto-sp9_F_contig1051.481.1 vs.
Match: Uncharacterized (protein n=9 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CUX8_PHYNI) HSP 1 Score: 96.3 bits (238), Expect = 2.360e-16 Identity = 88/299 (29.43%), Postives = 127/299 (42.47%), Query Frame = 1
Query: 2656 TRIAEEVGRRGGVETLLGSDKVLFQLEMGPK-ERIGIKIAGK--KDQIFNYRCPRERWVHLAFVSDSTGVFLMEDGKTASRLRDITVPLPMREIGGRET--ACQCLLQEVRYWKVKRRKEDVVEWMHQVLPGTAKDDGLIGYWTFEEGVGEHVNDVTEQRFRARMIGRGLKWAFSENMNTVEVAP----PPTPSWREQNVCKVELRRGRLAQRGRLHRQVVSHLDEDCVAHRAWMRMAETGQELQESCTCPHCGETVRRSQLKLHFQYQCHWFKEQCRNAGCGAWVPRLRRAEHERRFC 3525
T++ E GR + S K + GPK E + +++GK ++ F R R RW H+ F + S + L +G+ S R LPM IG +E + Q +QE+RYW R + + + +L AK L+GYWTFEEG+G+ V+D+ + R+ W + T EV PPTPS R+Q C V + LAQR R +EL HC + V L+ H + +C C+ GC A AEH R C
Sbjct: 597 TQLLERCGRH----IIASSVKNVISFVSGPKGEIVFYRLSGKAAREVNFQVRMERNRWNHVVFSAGSKELSLFLNGELKST-RSGVFDLPMSSIGTKEKTESFQGFIQEIRYWNECRSIQQIQQNGASILH-VAKCKSLVGYWTFEEGMGDLVDDMALKLPRSSCFD--TNWVIYD---TPEVRKRFGIPPTPSLRDQTCCLVNQKLKLLAQRAR-------------------------DRELDVVPCRQHCEQAVAYRDLERHHRVECVHRLVVCKEVGCEASYRFSNEAEHLRTKC 859
BLAST of mRNA_Ecto-sp9_F_contig1051.481.1 vs.
Match: Uncharacterized (protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3S404_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 5.600e-16 Identity = 102/367 (27.79%), Postives = 146/367 (39.78%), Query Frame = 1
Query: 2656 TRIAEEVGRRGGVETLLGSDKVLFQLEMGPKERI------GIKIAGKKDQIFNYRCPRERWVHLAFVSDSTGVFLMEDGKTASRLRDITVPLPMREIGGRETA--CQCLLQEVRYWKVKRRKEDVVEWMHQVLPGTAKDDGLIGYWTFEEGVGEHVNDVTEQRFRARMIGRGLKWAFSENMNTVEV----APPPTPSWREQNVCKVELRRGRLAQRGR------------------------------LHRQVV----------------SHLDEDCVAHRAWMRMAETGQELQESCTCP-HCGETVRRSQLKLHFQYQCHWFKEQCRNAGCGAWVPRLRRAEHERRFCGDSSAVRRRRRLARARAR 3579
T++ E GR + S + + L GP I G K A + FN R R RW H+A + + + +G+ S R + LPM +G +E A Q + EVRYWK R + + + +L AK L+GYWTFEEG+G+ V+D+ + R+ G W +T EV PPTPS R+Q C V + LAQR R +HR VV HL +DC H + + +E C +C + V+R + LH QC C CG + H +R C S V R+ + +AR R
Sbjct: 653 TQLLERCGRH----IIASSARNVISLVAGPNGEISFFRPSGAKAARAVN--FNVRLERNRWNHVALSAGVKELSVFLNGELKSIRRGV-FDLPMSRLGAQEQAESFQGFVLEVRYWKECRTVQQLQQHAASILH-VAKCKTLLGYWTFEEGMGDLVDDMALKLPRSACFG--TDWVL---FDTPEVRRRFGVPPTPSLRDQTCCVVNQKLKLLAQRARDRELDAVPCRQHCEQVVAFRQLERHHRVECVHRLVVCKEVGCERVFRWSSEAQHLHQDCARHLYRDELVRRYHDKRELVECILNCAQLVQRRFMPLHCHSQCVNRLVTCPWTDCGETIVAKSLTRHLQRECHSQSRVNERQMVEKARRR 1006
BLAST of mRNA_Ecto-sp9_F_contig1051.481.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZWX9_PHYSP) HSP 1 Score: 93.6 bits (231), Expect = 1.350e-15 Identity = 90/302 (29.80%), Postives = 125/302 (41.39%), Query Frame = 1
Query: 2656 TRIAEEVGRRGGVETLLGSDKVLFQLEMGPKERI------GIKIAGKKDQIFNYRCPRERWVHLAFVSDSTGVFLMEDGKTASRLRDITVPLPMREIGGRETA--CQCLLQEVRYWKVKRRKEDVVEWMHQVLPGTAKDDGLIGYWTFEEGVGEHVNDVTEQRFRARMIGRGLKWAFSENMNTVEVAP----PPTPSWREQNVCKVELRRGRLAQRGRLHRQVVSHLDEDCVAHRAWMRMAETGQELQESCTCPHCGETVRRSQLKLHFQYQCHWFKEQCRNAGCGAWVPRLRRAEHERRFC 3525
T++ E GR + S K + L GPK I G K A ++ F R R RW H+ F + + + L +G+ S R + LPM IG +E A Q + EVRYWK R + + + +L K L+GYWTFEEG+G+ V+D+ + R+ G W +T EV PPTPS R+Q C V + LAQR R +EL HC + V L+ H + +C C+ GC AEH R C
Sbjct: 446 TQLLERCGRH----IIASSGKNVISLVAGPKGEISFYRPSGAKAA--REVNFQTRLERIRWNHVVFSAGAKELSLFVNGELKSVRRGV-FGLPMSRIGTKEQAESFQGFVLEVRYWKECRTVQQIQQHAASILH-VRKCKKLLGYWTFEEGMGDLVDDMALKLPRSACFGTA--WVL---FDTPEVRKRFGIPPTPSLRDQTCCVVNQKLKLLAQRAR-------------------------DRELDMVPCRQHCEQVVAFRSLERHHRVECVHRMVVCKEVGCEQVYRWSSEAEHLRAKC 709 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1051.481.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 20
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig1051.481.1 >prot_Ecto-sp9_F_contig1051.481.1 ID=prot_Ecto-sp9_F_contig1051.481.1|Name=mRNA_Ecto-sp9_F_contig1051.481.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=1206bp MVRRKEPAQEPDGAMPLPPAADVKRPDHPLRSGKIAIWPYVMRDLPLSPVback to top mRNA from alignment at Ecto-sp9_F_contig1051:16654..21782- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig1051.481.1 ID=mRNA_Ecto-sp9_F_contig1051.481.1|Name=mRNA_Ecto-sp9_F_contig1051.481.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=5129bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1051:16654..21782- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1051:16654..21782- >mRNA_Ecto-sp9_F_contig1051.481.1 ID=mRNA_Ecto-sp9_F_contig1051.481.1|Name=mRNA_Ecto-sp9_F_contig1051.481.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=7236bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1051:16654..21782- (Ectocarpus species9 EcSCA_722f female)back to top |