mRNA_Ecto-sp9_F_contig1051.479.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig1051.479.1
Unique NamemRNA_Ecto-sp9_F_contig1051.479.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
[Close]
BLAST of mRNA_Ecto-sp9_F_contig1051.479.1 vs.
Match: Non-specific (serine/threonine protein kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJS5_9PHAE)

HSP 1 Score: 1066 bits (2757), Expect = 0.000e+0
Identity = 708/754 (93.90%), Postives = 715/754 (94.83%), Query Frame = 1 
Query:    1 MQRQQRGKTRAASLLLLFALLVTTAPRVAPRPVSLVQQAAEAPATSSVRNKGPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTLLVAGTVDGQVHALDPSTGGLRWSFDTGEPLVKSYQQLPGTLDEKKWLIPTLDGSILVHTTQGLRRPGLKARLLVEQTPFLDPKGVFYTGSKVSRIFGVDARTGEVRQVLSGDTADSLESNRRLLARSGSDDDVIWIGRNDYTIRAFDVPTGQEEWNLTIGEFVSLDDLYLTASSGAXXXXXXXXXXXXXXXXXXXXXLSGPVPSLTATADGSLQSVAAGKGGNDNRIGGISADPPEWDVPLTAHVASVFRVSLEEGSVHTYLPMQQIPLSQSAGTGAPVVGNGSGGTAAVGILENDQVYAVALGEHGGGGSDGGEDGGAGWGPGGHGSRXKKXSRAGEGKVTHGGRTTATQPLLPHGGDWQQQQ-RDGGDRPDADGGGSGSSSLVQSWSTKGTPQNAAVVSCPPKWCQPGHSAFPSCLVGVHTVQQITGEEQARLSLGMGSQAGGSTALDGXXXXXXAGNHDPKGVRTTSGYIGRLPRPSSQGDGAGDDLNYLTLATASRGPLESLLGWLYRGWSFVSLLLLAVVVAVVVDSRRATQYLKRAGLGGYPLYSGGAGGXGVGGEYDPTEDSGISGASEGSASGAXXXXXXXXXXXXXXXLVXXXXXXXXEVRGGCL 2259
            MQRQQRGKTRAASLLLLFALL TT PRV PRPVSLVQQ A+APATSSVRNKGPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX STLL+AGTVDGQVHAL+PSTGGLRWSFDTGEPLVKSYQQLPGTLDEKKWLIPTLDGSILVHTTQGLRRPGLKARLLVEQTPFLDPKG+FYTGSKVSRIFGVDARTGEVRQVLSGDTADSLESNRRLLARSGSDDDVIWIGRNDYTIRAFDVPTGQEEWNLTIGEFVSLDDLYL ASSGAXXXXXXXXXXXXXXXXXXXX  S PVPSLTATADGSLQSV AGKGGNDN IGGISADP EWDV LTAHVASVFRVSLEEGSVHTYLPMQQIPLSQSAG GAPVVGNGSGGTAAVGILENDQVYAVALGEHGGGG DGGED G GWGPGGHGSR KK SRAGEGKVTHGGRTTATQPLLPHGGDWQQQQ RDGGDRPDADGGGSGSSSLVQSWSTKGTPQ+AAVVSCPPKWCQPGHSAFPSCLVGVHTVQQITGEEQARLSLGMGSQAGGSTALDG XXXXXAG+HDPKGVRTTSGYIGRLPRPSSQG+GAGDDLNYLTLA ASRGPLESLLGWLYRGWSFVSLLLLAVVVAVVVDSRRA QYLKRAGLGGYPLYSGGAGGX VGGEYDPT DSGISGASEGSAS    XXXXXXXXXXXX LV        EVR GCL
Sbjct:    1 MQRQQRGKTRAASLLLLFALLFTTTPRVTPRPVSLVQQEADAPATSSVRNKGPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-STLLIAGTVDGQVHALEPSTGGLRWSFDTGEPLVKSYQQLPGTLDEKKWLIPTLDGSILVHTTQGLRRPGLKARLLVEQTPFLDPKGIFYTGSKVSRIFGVDARTGEVRQVLSGDTADSLESNRRLLARSGSDDDVIWIGRNDYTIRAFDVPTGQEEWNLTIGEFVSLDDLYLAASSGAXXXXXXXXXXXXXXXXXXXX--SEPVPSLTATADGSLQSVEAGKGGNDNHIGGISADP-EWDVRLTAHVASVFRVSLEEGSVHTYLPMQQIPLSQSAGAGAPVVGNGSGGTAAVGILENDQVYAVALGEHGGGGGDGGEDVGVGWGPGGHGSRGKKGSRAGEGKVTHGGRTTATQPLLPHGGDWQQQQQRDGGDRPDADGGGSGSSSLVQSWSTKGTPQHAAVVSCPPKWCQPGHSAFPSCLVGVHTVQQITGEEQARLSLGMGSQAGGSTALDGGXXXXXAGSHDPKGVRTTSGYIGRLPRPSSQGNGAGDDLNYLTLANASRGPLESLLGWLYRGWSFVSLLLLAVVVAVVVDSRRAAQYLKRAGLGGYPLYSGGAGGXXVGGEYDPTADSGISGASEGSAS----XXXXXXXXXXXXSLVAAAGGVRGEVRVGCL 746
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BLAST of mRNA_Ecto-sp9_F_contig1051.479.1 vs.
Match: Protein (kinase and ribonuclease (Fragment) n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPB5_9STRA)

HSP 1 Score: 109 bits (273), Expect = 1.000e-21
Identity = 75/198 (37.88%), Postives = 104/198 (52.53%), Query Frame = 1 
Query:  418 LLVAGTVDGQVHALDPSTGGLRWSFDTGEPLVKSYQ----QLPGTLDEKK---WLIPTLDGSILVHTT-QGLRRPGLKARLLVEQTPFLDPKG-VFYTGSKVSRIFGVDARTGEVRQVLSGDTADSLES--NRRL---------------------LARSGSDDDVIWIGRNDYTIRAFDVPTGQEEWNLTIGEFVSL 915
            LL+ GTVDG VHA+D S GG+ WSFD+G PLV SYQ    + P +         LIP +DGS+LVHT  +G++R  L A  LV++ PFL   G   YTG++ S    +D   G V Q  SG +A+ +    + RL                      +R      ++W+GR ++ +RA D  +GQE WNLT+ E   L
Sbjct:  114 LLIVGTVDGWVHAVD-SAGGVAWSFDSGAPLVTSYQGYDHEQPSSAPSAPPFPVLIPGVDGSLLVHTPGKGIQRLPLTAGQLVDRAPFLAADGRTLYTGARSSEALMIDLDAGTVVQRFSGPSAEKIAHMIDPRLHTPTLAPAXXXXXXXXXXXXXXSRKAKRRQLLWLGRVEHRLRAVDSMSGQELWNLTVSELTPL 310
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BLAST of mRNA_Ecto-sp9_F_contig1051.479.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XTM6_9STRA)

HSP 1 Score: 105 bits (262), Expect = 2.310e-20
Identity = 69/170 (40.59%), Postives = 98/170 (57.65%), Query Frame = 1 
Query:  433 TVDGQVHALDPSTGGLRWSFDTGEPLVKSYQQLPGTL----DEKKWLIPTLDGSILVHTTQG-LRRPGLKARLLVEQTPFLDP-KGVFYTGSKVSRIFGVDARTGEVRQVLSGDTADSLESNRRLLARSGSDDDVIWIGRNDYTIRAFDVPTGQEE-WNLTIGEFVSLDD 921
            T DGQ+HA+     G  WS   G PL++S+QQ   ++         +IPT DGS+LV T  G +   G++A   V +TPFLDP  G+FYTG+K + +F VDA +G+V    SGD  D+   N      S  D +V+++GR DY IRAF++  G +E WNLT  E   + +
Sbjct:  112 TSDGQIHAVGED--GEIWSAAIGGPLLQSHQQPRASVGLGDSGPGAMIPTTDGSLLVDTGGGDVELSGVRAPQFVARTPFLDPGTGLFYTGAKKTTVFVVDAASGDVVHRFSGDDGDAGPGNN-----SAHDGNVLYLGRVDYQIRAFNMRDGGKEVWNLTYSEVADVSN 274
[Close]
BLAST of mRNA_Ecto-sp9_F_contig1051.479.1 vs.
Match: Hypothetical (protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4UAD2_GUITH)

HSP 1 Score: 92.8 bits (229), Expect = 1.820e-16
Identity = 57/171 (33.33%), Postives = 90/171 (52.63%), Query Frame = 1 
Query:  418 LLVAGTVDGQVHALDPSTGGLRWSFDTGEPLVKSYQQLPGTLDEKKWLIPTLDGSILVHTTQG---LRRPGLKARLLVEQTPFLDPKGVFYTGSKVSRIFGVDARTGEVRQVLSGDTADSLESNRRLLA-RSGSDDDV-IWIGRNDYTIRAFDVPTGQEEWNLTIGEFVSL 915
            +++ GT+DG++HALD   G   W  DTG  +V +YQ    T      +IPTL G IL++++     L +  +    LV+ +PF+   G  Y G+K S  F +D RTG  R+     +A+ L+ +   +A R+  + D  + +GR D  + A D  TG+  WN T+  F  L
Sbjct:   64 VILVGTLDGKMHALDSEDGAKLWEVDTGGWMVSTYQN--STSMAGNVIIPTLSGDILIYSSSSQSPLHKLPVSLHDLVDHSPFVSKDGYMYVGTKASEYFTIDGRTGSSRRA----SANPLQLDASPVADRAAQEADWRLLLGRKDLRVSAIDPSTGRMSWNATLSFFSDL 228
[Close]
BLAST of mRNA_Ecto-sp9_F_contig1051.479.1 vs.
Match: Non-specific (serine/threonine protein kinase n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NRC7_9EUKA)

HSP 1 Score: 92.0 bits (227), Expect = 2.080e-15
Identity = 61/187 (32.62%), Postives = 94/187 (50.27%), Query Frame = 1 
Query:  412 STLLVAGTVDGQVHALDPSTGGLRWSFDTGEPLVKSYQQ-------LPGTLDEKKWLI--PTLDGSILVHTTQGLR--RPGLKARLLVEQTPFLDPKGVFYTGSKVSRIFGVDARTGEVRQVLSGDTADSLESNRRLLARSGSDDDVIWIGRNDYTIRAFDVPTGQEEWNLTIGEFVSLDDLYLTAS 939
            S+ LV GTVDG +  LDP+TG  +W+ D G PL   Y Q       LP T D+  +++  P  +       TQ  R  R  L    LV+ +P++  K  +  GSK +R FG+D R G + + ++  +  + E + +       + D IWI    YTI+A D+ T +E WN++ GE+ S     +  S
Sbjct:   53 SSTLVIGTVDGLIIGLDPATGDEKWTTDIGRPLFSRYGQYADGSVLLPSTDDDSVYIMTWPKDNSRQPTQPTQSPRLLRIPLSVEELVKHSPYIS-KDSYIFGSKDTRTFGIDVRDGNIFKSITSTSTQASEEDIQ-------EKDKIWIMAQYYTIKALDLQTQKERWNVSAGEYYSSSSFSILGS 231
[Close]
BLAST of mRNA_Ecto-sp9_F_contig1051.479.1 vs.
Match: Protein (kinase domain-containing protein (Fragment) n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WV49_9CHLO)

HSP 1 Score: 84.7 bits (208), Expect = 3.830e-13
Identity = 57/177 (32.20%), Postives = 87/177 (49.15%), Query Frame = 1 
Query:  421 LVAGTVDGQVHALDPSTGGLRWSFDTGEPLVKSYQQL---PGTLDEKKWLIPTLDGSILVH-----TTQGLRRPGLKARLLVEQTPFLDPKGVFYTGSKVSRIFGVDARTGEVRQVLSGD----TADSLESNRRLLARSGSDDDVIWIGRNDYTIRAFDVPTGQEEWNLTIGEFVSL 915
            L+   +DG+V A+DP +G + WSFD+G PL+   Q     PG       + P +DG +  +      T  L R  +    LVE +P L   G    G++ S +F +DA  G + Q LSG     T ++L+  + + AR     D + +GR DYT+R+    +G E WN T    + L
Sbjct:   62 LIVSLLDGRVVAVDPLSGAVLWSFDSGSPLLSVQQSEAAPPGV-----HIFPGVDGGLYAYHGLDKDTAKLERLPVTLPELVELSPSLTDDGSIIVGNRKSSVFILDASDGRLLQTLSGSLEDRTLEALQLQQLMDAR-----DTVVLGREDYTVRSVQRKSGAEAWNATFSRVLRL 228
[Close]
BLAST of mRNA_Ecto-sp9_F_contig1051.479.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Sexangularia sp. CB-2014 TaxID=1486929 RepID=A0A7S1VDL9_9EUKA)

HSP 1 Score: 79.3 bits (194), Expect = 1.290e-11
Identity = 63/193 (32.64%), Postives = 92/193 (47.67%), Query Frame = 1 
Query:  421 LVAGTVDGQVHALDPSTGGLRWSFDT-GEPLVKSYQQLPG---TLDEKKWLIPTLDGSIL-VHTTQG-LRRPGLKARLLVEQTPFLDPKGVFYTGSKVSRIFGVDARTGEVRQVLSG--DT------ADSLESNRRLL----------ARSGS------DDDVIWIGRNDYTIRAFDVPTGQEEWNLTIGEFV 909
            L  GT +GQVHA DP +  +RW+ DT  +PL  S+    G     D    LIP    ++  V   +G + R       LV  TP +  + +   GSK S+I  +  +TG +  VL G  DT      A +  S+ +LL          AR G       DDDVI +GR DY++ A +  TG+  WN++ G+ +
Sbjct:   43 LFIGTANGQVHAFDPQSHRVRWTIDTDSKPLFSSFSGQSGGEPDADRPFGLIPGTGNALYAVDAAEGTVTRVNEALPSLVASTPVVTDQKMLLLGSKSSKILALSPKTGRIAWVLGGGEDTIGVGPSAGASLSDEQLLSLRMQAILREARDGGADVADDDDDVILVGRTDYSLAALESTTGELMWNVSSGDLI 235
[Close]
BLAST of mRNA_Ecto-sp9_F_contig1051.479.1 vs.
Match: Hypothetical (protein (Fragment) n=2 Tax=Hemiselmis TaxID=77924 RepID=A0A7S0VJS4_9CRYP)

HSP 1 Score: 72.8 bits (177), Expect = 1.400e-11
Identity = 36/108 (33.33%), Postives = 68/108 (62.96%), Query Frame = 1 
Query:  418 LLVAGTVDGQVHALDPSTGGLRWSFDTGEPLVKSYQQLPGTLDEKKWLIPTLDGSI-LVHTTQGLRRPGLKARLLVEQTPFLDPKGVFYTGSKVSRIFGVDARTGEVR 738
            L+V GT+DG+VH +   TG ++WS +TG P++ ++Q    ++  +  ++P+++G + L+   + L+   + A+ LV  +PF+   G  Y G+K +++  VDA TG+VR
Sbjct:   18 LVVVGTIDGKVHGVCRETGSVKWSVETGGPMLSAFQNT--SMFGEGTVVPSINGGVFLLGEDRTLQALPVSAQELVHNSPFVGEDGTVYIGAKRTQLLMVDAETGQVR 123
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BLAST of mRNA_Ecto-sp9_F_contig1051.479.1 vs.
Match: CSON014065 (protein n=2 Tax=Culicoides sonorensis TaxID=179676 RepID=A0A336M9H2_CULSO)

HSP 1 Score: 75.9 bits (185), Expect = 2.270e-10
Identity = 53/170 (31.18%), Postives = 82/170 (48.24%), Query Frame = 1 
Query:  418 LLVAGTVDGQVHALDPSTGG-LRWSFDTGEPLVKSYQQLPGTLDEKKW--LIPTLDGSILVHTTQGLRRPGLKARLLVEQTPFLDPKGVFYTGSKVSRIFGVDARTGEVRQVLS-----GDTADSLESNRRLLARSGSDDDVIWIGRNDYTIRAFDVPTGQEEWNLTIGE 903
            LL   T+DG++ ALD +  G L+WS DTGEPL+ S           KW  +IP+L G +     + +    +KA  L++ + F     +  +G      +GV  RTG++    S       T    E+N++        DDV+ + R   T+RA D  +G E WN +IG+
Sbjct:   64 LLYVSTLDGKLSALDITKNGELKWSVDTGEPLLSSSIHRLELTTNGKWVRMIPSLSGGLYKFDGETIEAIPIKAEDLLKSS-FKFSDDIVISGGIEKNSYGVSTRTGQILYHCSMKGCTNFTISDDEANKKQKQHDALLDDVMIVRRETQTVRAVDPRSGVERWNFSIGQ 232
[Close]
BLAST of mRNA_Ecto-sp9_F_contig1051.479.1 vs.
Match: Non-specific (serine/threonine protein kinase n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6DYP3_MYTGA)

HSP 1 Score: 75.1 bits (183), Expect = 3.510e-10
Identity = 50/166 (30.12%), Postives = 84/166 (50.60%), Query Frame = 1 
Query:  415 TLLVAGTVDGQVHALDPSTGGLRWSFDTGEPLVKSYQQLPGTLDEKKWLIPTLDGSI--LVHTTQGLRRPGLKARLLVEQTPFLDPKGVFYTGSKVSRIFGVDARTGEVRQVLSGDTADSLESNRRLLARSGSDDDVIWIGRNDYTIRAFDVPTGQEEWNLTIGEF 906
            +LL   T+DG +HA+  +TG  +W+    EP++K   ++  T  +  +L    DGS+  L     G+++       LV  +P    +G+ YTG K      VD  TGE  + L      S++  +++       ++VI+IGR++YTI  FD  TG + WN T  ++
Sbjct:   32 SLLFVSTLDGTLHAVSKTTGKTQWTLQE-EPVIKVPVEV--TAGKLSFLPDPKDGSLYALGDGMNGIKKLPFTIPQLVSASPCKSNEGILYTGHKKDVWIAVDPVTGEKIRTL------SMDGTQKVCPSDA--ENVIYIGRSEYTITMFDSKTGHKRWNATFTDY 186
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1051.479.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Non-specific0.000e+093.90serine/threonine protein kinase n=2 Tax=Ectocarpus... [more]
Protein1.000e-2137.88kinase and ribonuclease (Fragment) n=2 Tax=Monodop... [more]
Hypothetical2.310e-2040.59protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=... [more]
Hypothetical1.820e-1633.33protein n=1 Tax=Guillardia theta TaxID=55529 RepID... [more]
Non-specific2.080e-1532.62serine/threonine protein kinase n=1 Tax=Planoproto... [more]
Protein3.830e-1332.20kinase domain-containing protein (Fragment) n=1 Ta... [more]
Hypothetical1.290e-1132.64protein (Fragment) n=1 Tax=Sexangularia sp. CB-201... [more]
Hypothetical1.400e-1133.33protein (Fragment) n=2 Tax=Hemiselmis TaxID=77924 ... [more]
CSON0140652.270e-1031.18protein n=2 Tax=Culicoides sonorensis TaxID=179676... [more]
Non-specific3.510e-1030.12serine/threonine protein kinase n=1 Tax=Mytilus ga... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1051contigEcto-sp9_F_contig1051:3..3143 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1066.6
Seed ortholog evalue5.3e-309
Seed eggNOG ortholog2880.D7G2H1
Preferred nameIRE1
KEGG koko:K08852
KEGG Pathwayko04140,ko04141,ko04210,ko04932,ko05010,map04140,map04141,map04210,map04932,map05010
EggNOG free text desc.ribonuclease activity
EggNOG OGsCOG0515@1,KOG1027@2759
EC2.7.11.1
COG Functional cat.KLT
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001
Hectar predicted targeting categorysignal peptide
Exons3
Model size2259
Cds size2259
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1051.479.1prot_Ecto-sp9_F_contig1051.479.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig1051 3..3143 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928263.7356405-CDS-Ecto-sp9_F_contig1051:2..4691622928263.7356405-CDS-Ecto-sp9_F_contig1051:2..469Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1051 3..469 -
1692277814.0584788-CDS-Ecto-sp9_F_contig1051:2..4691692277814.0584788-CDS-Ecto-sp9_F_contig1051:2..469Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1051 3..469 -
1622928263.756555-CDS-Ecto-sp9_F_contig1051:952..11381622928263.756555-CDS-Ecto-sp9_F_contig1051:952..1138Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1051 953..1138 -
1692277814.072951-CDS-Ecto-sp9_F_contig1051:952..11381692277814.072951-CDS-Ecto-sp9_F_contig1051:952..1138Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1051 953..1138 -
1622928263.7758057-CDS-Ecto-sp9_F_contig1051:1537..31431622928263.7758057-CDS-Ecto-sp9_F_contig1051:1537..3143Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1051 1538..3143 -
1692277814.0812566-CDS-Ecto-sp9_F_contig1051:1537..31431692277814.0812566-CDS-Ecto-sp9_F_contig1051:1537..3143Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1051 1538..3143 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig1051.479.1

>prot_Ecto-sp9_F_contig1051.479.1 ID=prot_Ecto-sp9_F_contig1051.479.1|Name=mRNA_Ecto-sp9_F_contig1051.479.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=753bp
MQRQQRGKTRAASLLLLFALLVTTAPRVAPRPVSLVQQAAEAPATSSVRN
KGPSAAAAASRKKPPRTTKSSFPSAAAAGGENQGDDAAASSVLLSSEIEA
LLFEQPPPLGDNNALALVGEQQQQQQQQRRRQQQQQRSTLLVAGTVDGQV
HALDPSTGGLRWSFDTGEPLVKSYQQLPGTLDEKKWLIPTLDGSILVHTT
QGLRRPGLKARLLVEQTPFLDPKGVFYTGSKVSRIFGVDARTGEVRQVLS
GDTADSLESNRRLLARSGSDDDVIWIGRNDYTIRAFDVPTGQEEWNLTIG
EFVSLDDLYLTASSGAGNGRTRAEAARAAAAASAAAALSGPVPSLTATAD
GSLQSVAAGKGGNDNRIGGISADPPEWDVPLTAHVASVFRVSLEEGSVHT
YLPMQQIPLSQSAGTGAPVVGNGSGGTAAVGILENDQVYAVALGEHGGGG
SDGGEDGGAGWGPGGHGSRGKKGSRAGEGKVTHGGRTTATQPLLPHGGDW
QQQQRDGGDRPDADGGGSGSSSLVQSWSTKGTPQNAAVVSCPPKWCQPGH
SAFPSCLVGVHTVQQITGEEQARLSLGMGSQAGGSTALDGGGGGGGAGNH
DPKGVRTTSGYIGRLPRPSSQGDGAGDDLNYLTLATASRGPLESLLGWLY
RGWSFVSLLLLAVVVAVVVDSRRATQYLKRAGLGGYPLYSGGAGGGGVGG
EYDPTEDSGISGASEGSASGAGGGGGGGGGGGGGGSLVAAAGGGGGEVRG
GCL
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mRNA from alignment at Ecto-sp9_F_contig1051:3..3143-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig1051.479.1 ID=mRNA_Ecto-sp9_F_contig1051.479.1|Name=mRNA_Ecto-sp9_F_contig1051.479.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=3141bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1051:3..3143- (Ectocarpus species9 EcSCA_722f female)
ATGCAACGGCAACAGCGCGGGAAGACCAGGGCCGCTTCCCTCCTGCTGCT
CTTCGCCCTGCTGGTCACCACCGCCCCGCGCGTCGCGCCGCGACCCGTTA
GTCTGGTGCAGCAGGCGGCGGAGGCGCCAGCCACCTCATCGGTACGAAAC
AAGGGCCCCTCCGCGGCAGCCGCCGCGTCCCGAAAGAAGCCCCCACGCAC
CACCAAGTCATCCTTCCCCTCGGCCGCGGCAGCGGGCGGAGAGAACCAAG
GCGACGATGCTGCCGCGTCGTCCGTGCTCCTGTCCTCCGAGATCGAGGCC
TTGCTCTTCGAACAACCTCCGCCGCTTGGGGACAACAACGCTCTCGCCCT
AGTCGGGGAGCAGCAGCAGCAGCAGCAGCAGCAGCGGCGACGGCAACAGC
AACAGCAACGGTCAACCCTCTTGGTCGCCGGGACTGTCGACGGGCAGGTG
CATGCCCTGGACCCGTCCACGGGGGGCCTGAGGTGGTCCTTCGACACGGG
AGAGCCGCTGGTGAAGTCCTACCAGCAGCTGCCCGGGACTCTCGACGAGA
AGAAGTGGCTCATCCCCACCCTGGACGGATCCATACTGGTGCACACGACC
CAGGGCCTCCGGCGGCCGGGCCTCAAGGCCCGGCTCCTCGTGGAGCAGAC
GCCGTTCCTCGATCCGAAGGGGGTATTCTACACGGGCTCCAAGGTTTCCC
GGATCTTCGGCGTCGACGCGCGCACCGGCGAGGTCCGCCAGGTCCTGTCC
GGGGACACGGCGGACAGCCTGGAGAGCAACCGCCGGCTGCTGGCGCGGAG
CGGCAGCGACGACGACGTCATCTGGATCGGCCGCAACGACTACACTATCC
GCGCGTTCGACGTGCCGACTGGCCAGGAGGAGTGGAACCTCACCATCGGG
GAGTTCGTGTCCCTCGACGACCTGTACCTGACGGCCTCGTCTGGGGCCGG
GAACGGCAGGACTCGTGCGGAGGCCGCCAGGGCCGCCGCCGCCGCTTCCG
CCGCCGCCGCTCTCTCCGGGCCGGTGCCCTCGCTCACCGCCACCGCAGAC
GGCTCGCTTCAATCGGTGGCGGCGGGTAAGGGAGGCAACGACAACCGTAT
CGGAGGGATTTCCGCTGACCCCCCCGAGTGGGACGTGCCGCTGACGGCCC
ACGTGGCCAGCGTGTTCCGGGTGTCGCTGGAGGAAGGGTCCGTCCACACG
TACCTCCCCATGCAGCAGATACCGCTGTCGCAATCCGCCGGCACCGGAGC
GCCGGTCGTCGGCAACGGGAGCGGAGGCACCGCCGCGGTGGGGATTCTCG
AGAACGACCAGGTGTACGCGGTGGCCCTCGGCGAGCACGGCGGCGGCGGT
AGCGACGGTGGAGAGGACGGCGGCGCCGGCTGGGGGCCCGGGGGCCACGG
GAGCCGGGGAAAGAAGGGCAGCAGGGCCGGGGAGGGGAAGGTGACCCACG
GCGGGAGGACCACCGCGACGCAGCCTCTGTTGCCGCACGGGGGTGACTGG
CAGCAGCAGCAGCGCGACGGAGGGGACAGGCCGGATGCAGATGGGGGCGG
AAGCGGATCGAGCTCGTTGGTGCAGAGCTGGTCAACGAAGGGCACGCCCC
AAAACGGTGAGCTCTCCCTCCTTTCCCCCGTGCTGCGTGCGCATTTACGC
TGGGTGTTGCGCGTGAGTTTATTTTTTTCCCCTGCGTGTATGTATGTGTG
TCGTGAAAGAAACGGCCTTTTGCTTCCCCTGCGTCTGTTGTTGTGTCGGT
GTTGTAAATATAGCTAGCTGCCTAGGAATGTCGAGCACCTACTTTTTTAT
TTTCAAGTGTAACTTTTGTACCATCTCTTCTCCGTTTTTCTTCCTTTCCT
ATTTTTCAAGTGTGGCGGGTTTCGTATCGCAAGCAGTTGCGTTGTGGAGA
TGAGATCAGTCGACGCCCTCCCCAATCTTTGCCGCGGTAACCTTCCCAAC
ACAATCCTAACGCCACCATTCTCTCCCGACGACATCTCCTACGCAACGGA
AGCAGCAGCAGTAGTGAGTTGCCCGCCGAAGTGGTGCCAGCCGGGGCACT
CAGCCTTTCCGAGTTGCCTGGTGGGCGTGCACACGGTCCAACAAATTACG
GGAGAAGAGCAGGCACGCTTGTCGCTCGGCATGGGCTCGCAAGCAGGCGG
CAGCACTGCTCTCGACGGCGGTGGCGGCGGAGGCGGCGCAGGTGTGTACA
GCACTTTGTATGTTTCATCCATCTCCTTTAGCTCTTTGACAGCGGACCGA
TGTGTCCGGACTGCTGTGCTTCTGCTCTCGCTTCAGCACGTTGGTGGTCT
GGCCCTTTCACGAGGCATTCGGAGCCATGAGCCTGGGTACATGATATGTC
CGTCGTTTTGTTTTTGTTTCGTGTCTTTGCCGTCCGAAGGCGCTGGATTG
GCGAACGTGATGTATATAGACACGAACGTGGTCTGGGAGAGGGTTTTGTT
GTCGCCATTTTGGGATAGCGGTTTACGTCATGCTTTGACGGCGATGTGTG
TACCGACGCATGTCGTTCAGAACGTGGCGAAGCATCCACGAAAAGGTTGA
TGGATGTAGAATCCGTTTTTTTTTTGTCGTAGAATCTATTGTCCGATTTC
CCACTGTCCCTTCCTCCCTCCCTCCCGCGACGCCTATGCCTCCGTACTCC
CGTGCAAACCACTCACGCACCCAGGCAACCACGACCCTAAGGGGGTCAGA
ACGACCTCCGGGTACATCGGGCGCCTCCCCCGCCCTTCGTCCCAGGGGGA
CGGCGCGGGCGACGACCTGAACTACCTGACCCTGGCGACCGCGTCGCGGG
GCCCCCTCGAGTCCCTGCTCGGCTGGCTCTACCGCGGGTGGAGCTTCGTC
TCCCTTCTGCTGCTCGCCGTCGTGGTGGCGGTCGTAGTGGACTCTCGGAG
GGCGACCCAGTACCTAAAGCGCGCCGGGCTCGGGGGCTACCCGCTGTACA
GCGGCGGGGCGGGCGGCGGCGGGGTGGGCGGAGAGTACGACCCGACCGAG
GACAGCGGCATCAGCGGCGCGTCGGAAGGGTCCGCTTCTGGTGCTGGGGG
GGGGGGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCTCGCTCGTGGCTG
CTGCTGGCGGGGGGGGGGGCGAGGTCCGGGGGGGGTGCCTG
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1051:3..3143-

>mRNA_Ecto-sp9_F_contig1051.479.1 ID=mRNA_Ecto-sp9_F_contig1051.479.1|Name=mRNA_Ecto-sp9_F_contig1051.479.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=4518bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1051:3..3143- (Ectocarpus species9 EcSCA_722f female)
ATGCAACGGCAACAGCGCGGGAAGACCAGGGCCGCTTCCCTCCTGCTGCT
CTTCGCCCTGCTGGTCACCACCGCCCCGCGCGTCGCGCCGCGACCCGTTA
GTCTGGTGCAGCAGGCGGCGGAGGCGCCAGCCACCTCATCGGTACGAAAC
AAGGGCCCCTCCGCGGCAGCCGCCGCGTCCCGAAAGAAGCCCCCACGCAC
CACCAAGTCATCCTTCCCCTCGGCCGCGGCAGCGGGCGGAGAGAACCAAG
GCGACGATGCTGCCGCGTCGTCCGTGCTCCTGTCCTCCGAGATCGAGGCC
TTGCTCTTCGAACAACCTCCGCCGCTTGGGGACAACAACGCTCTCGCCCT
AGTCGGGGAGCAGCAGCAGCAGCAGCAGCAGCAGCGGCGACGGCAACAGC
AACAGCAACGGTCAACCCTCTTGGTCGCCGGGACTGTCGACGGGCAGGTG
CATGCCCTGGACCCGTCCACGGGGGGCCTGAGGTGGTCCTTCGACACGGG
AGAGCCGCTGGTGAAGTCCTACCAGCAGCTGCCCGGGACTCTCGACGAGA
AGAAGTGGCTCATCCCCACCCTGGACGGATCCATACTGGTGCACACGACC
CAGGGCCTCCGGCGGCCGGGCCTCAAGGCCCGGCTCCTCGTGGAGCAGAC
GCCGTTCCTCGATCCGAAGGGGGTATTCTACACGGGCTCCAAGGTTTCCC
GGATCTTCGGCGTCGACGCGCGCACCGGCGAGGTCCGCCAGGTCCTGTCC
GGGGACACGGCGGACAGCCTGGAGAGCAACCGCCGGCTGCTGGCGCGGAG
CGGCAGCGACGACGACGTCATCTGGATCGGCCGCAACGACTACACTATCC
GCGCGTTCGACGTGCCGACTGGCCAGGAGGAGTGGAACCTCACCATCGGG
GAGTTCGTGTCCCTCGACGACCTGTACCTGACGGCCTCGTCTGGGGCCGG
GAACGGCAGGACTCGTGCGGAGGCCGCCAGGGCCGCCGCCGCCGCTTCCG
CCGCCGCCGCTCTCTCCGGGCCGGTGCCCTCGCTCACCGCCACCGCAGAC
GGCTCGCTTCAATCGGTGGCGGCGGGTAAGGGAGGCAACGACAACCGTAT
CGGAGGGATTTCCGCTGACCCCCCCGAGTGGGACGTGCCGCTGACGGCCC
ACGTGGCCAGCGTGTTCCGGGTGTCGCTGGAGGAAGGGTCCGTCCACACG
TACCTCCCCATGCAGCAGATACCGCTGTCGCAATCCGCCGGCACCGGAGC
GCCGGTCGTCGGCAACGGGAGCGGAGGCACCGCCGCGGTGGGGATTCTCG
AGAACGACCAGGTGTACGCGGTGGCCCTCGGCGAGCACGGCGGCGGCGGT
AGCGACGGTGGAGAGGACGGCGGCGCCGGCTGGGGGCCCGGGGGCCACGG
GAGCCGGGGAAAGAAGGGCAGCAGGGCCGGGGAGGGGAAGGTGACCCACG
GCGGGAGGACCACCGCGACGCAGCCTCTGTTGCCGCACGGGGGTGACTGG
CAGCAGCAGCAGCGCGACGGAGGGGACAGGCCGGATGCAGATGGGGGCGG
AAGCGGATCGAGCTCGTTGGTGCAGAGCTGGTCAACGAAGGGCACGCCCC
AAAACGATGCAACGGCAACAGCGCGGGAAGACCAGGGCCGCTTCCCTCCT
GCTGCTCTTCGCCCTGCTGGTCACCACCGCCCCGCGCGTCGCGCCGCGAC
CCGTTAGTCTGGTGCAGCAGGCGGCGGAGGCGCCAGCCACCTCATCGGTA
CGAAACAAGGGCCCCTCCGCGGCAGCCGCCGCGTCCCGAAAGAAGCCCCC
ACGCACCACCAAGTCATCCTTCCCCTCGGCCGCGGCAGCGGGCGGAGAGA
ACCAAGGCGACGATGCTGCCGCGTCGTCCGTGCTCCTGTCCTCCGAGATC
GAGGCCTTGCTCTTCGAACAACCTCCGCCGCTTGGGGACAACAACGCTCT
CGCCCTAGTCGGGGAGCAGCAGCAGCAGCAGCAGCAGCAGCGGCGACGGC
AACAGCAACAGCAACGGTCAACCCTCTTGGTCGCCGGGACTGTCGACGGG
CAGGTGCATGCCCTGGACCCGTCCACGGGGGGCCTGAGGTGGTCCTTCGA
CACGGGAGAGCCGCTGGTGAAGTCCTACCAGCAGCTGCCCGGGACTCTCG
ACGAGAAGAAGTGGCTCATCCCCACCCTGGACGGATCCATACTGGTGCAC
ACGACCCAGGGCCTCCGGCGGCCGGGCCTCAAGGCCCGGCTCCTCGTGGA
GCAGACGCCGTTCCTCGATCCGAAGGGGGTATTCTACACGGGCTCCAAGG
TTTCCCGGATCTTCGGCGTCGACGCGCGCACCGGCGAGGTCCGCCAGGTC
CTGTCCGGGGACACGGCGGACAGCCTGGAGAGCAACCGCCGGCTGCTGGC
GCGGAGCGGCAGCGACGACGACGTCATCTGGATCGGCCGCAACGACTACA
CTATCCGCGCGTTCGACGTGCCGACTGGCCAGGAGGAGTGGAACCTCACC
ATCGGGGAGTTCGTGTCCCTCGACGACCTGTACCTGACGGCCTCGTCTGG
GGCCGGGAACGGCAGGACTCGTGCGGAGGCCGCCAGGGCCGCCGCCGCCG
CTTCCGCCGCCGCCGCTCTCTCCGGGCCGGTGCCCTCGCTCACCGCCACC
GCAGACGGCTCGCTTCAATCGGTGGCGGCGGGTAAGGGAGGCAACGACAA
CCGTATCGGAGGGATTTCCGCTGACCCCCCCGAGTGGGACGTGCCGCTGA
CGGCCCACGTGGCCAGCGTGTTCCGGGTGTCGCTGGAGGAAGGGTCCGTC
CACACGTACCTCCCCATGCAGCAGATACCGCTGTCGCAATCCGCCGGCAC
CGGAGCGCCGGTCGTCGGCAACGGGAGCGGAGGCACCGCCGCGGTGGGGA
TTCTCGAGAACGACCAGGTGTACGCGGTGGCCCTCGGCGAGCACGGCGGC
GGCGGTAGCGACGGTGGAGAGGACGGCGGCGCCGGCTGGGGGCCCGGGGG
CCACGGGAGCCGGGGAAAGAAGGGCAGCAGGGCCGGGGAGGGGAAGGTGA
CCCACGGCGGGAGGACCACCGCGACGCAGCCTCTGTTGCCGCACGGGGGT
GACTGGCAGCAGCAGCAGCGCGACGGAGGGGACAGGCCGGATGCAGATGG
GGGCGGAAGCGGATCGAGCTCGTTGGTGCAGAGCTGGTCAACGAAGGGCA
CGCCCCAAAACGCAGCAGTAGTGAGTTGCCCGCCGAAGTGGTGCCAGCCG
GGGCACTCAGCCTTTCCGAGTTGCCTGGTGGGCGTGCACACGGTCCAACA
AATTACGGGAGAAGAGCAGGCACGCTTGTCGCTCGGCATGGGCTCGCAAG
CAGGCGGCAGCACTGCTCTCGACGGCGGTGGCGGCGGAGGCGGCGCAGCA
GCAGTAGTGAGTTGCCCGCCGAAGTGGTGCCAGCCGGGGCACTCAGCCTT
TCCGAGTTGCCTGGTGGGCGTGCACACGGTCCAACAAATTACGGGAGAAG
AGCAGGCACGCTTGTCGCTCGGCATGGGCTCGCAAGCAGGCGGCAGCACT
GCTCTCGACGGCGGTGGCGGCGGAGGCGGCGCAGGCAACCACGACCCTAA
GGGGGTCAGAACGACCTCCGGGTACATCGGGCGCCTCCCCCGCCCTTCGT
CCCAGGGGGACGGCGCGGGCGACGACCTGAACTACCTGACCCTGGCGACC
GCGTCGCGGGGCCCCCTCGAGTCCCTGCTCGGCTGGCTCTACCGCGGGTG
GAGCTTCGTCTCCCTTCTGCTGCTCGCCGTCGTGGTGGCGGTCGTAGTGG
ACTCTCGGAGGGCGACCCAGTACCTAAAGCGCGCCGGGCTCGGGGGCTAC
CCGCTGTACAGCGGCGGGGCGGGCGGCGGCGGGGTGGGCGGAGAGTACGA
CCCGACCGAGGACAGCGGCATCAGCGGCGCGTCGGAAGGGTCCGCTTCTG
GTGCTGGGGGGGGGGGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCTCG
CTCGTGGCTGCTGCTGGCGGGGGGGGGGGCGAGGTCCGGGGGGGGTGCCT
GGCAACCACGACCCTAAGGGGGTCAGAACGACCTCCGGGTACATCGGGCG
CCTCCCCCGCCCTTCGTCCCAGGGGGACGGCGCGGGCGACGACCTGAACT
ACCTGACCCTGGCGACCGCGTCGCGGGGCCCCCTCGAGTCCCTGCTCGGC
TGGCTCTACCGCGGGTGGAGCTTCGTCTCCCTTCTGCTGCTCGCCGTCGT
GGTGGCGGTCGTAGTGGACTCTCGGAGGGCGACCCAGTACCTAAAGCGCG
CCGGGCTCGGGGGCTACCCGCTGTACAGCGGCGGGGCGGGCGGCGGCGGG
GTGGGCGGAGAGTACGACCCGACCGAGGACAGCGGCATCAGCGGCGCGTC
GGAAGGGTCCGCTTCTGGTGCTGGGGGGGGGGGGGGCGGCGGCGGCGGCG
GCGGCGGCGGCGGCTCGCTCGTGGCTGCTGCTGGCGGGGGGGGGGGCGAG
GTCCGGGGGGGGTGCCTG
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