mRNA_Ecto-sp9_F_contig10498.464.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig10498.464.1
Unique NamemRNA_Ecto-sp9_F_contig10498.464.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig10498.464.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ62_ECTSI)

HSP 1 Score: 909 bits (2348), Expect = 0.000e+0
Identity = 445/464 (95.91%), Postives = 449/464 (96.77%), Query Frame = 1
Query:    1 MVSVSRPAAAVFYLAAVTAGTAPNQGGPELNFRQHEHQPRASPMLPPFLEGQPERWQARSYGPDVRVAPHTAAGPGLRSASTGVPASFTIRLAGTGGSGARPEQQGEKNPDWDYNVDKKRFIYVWVASEDNVFVAGVRNNGNGTLTATYESYFPGDYLVHVEDVNLKVQDHFGRGRPIIGSPFSLTVSGDPAVDVDALPVCGGEGEEEDLASSYWRTGSWISSNIAARNHGVLRDGWVFQPKTCVYEAFSYDDLMLLAGLDEPTWLLALGNSILRGIFLTILDMALAQGQKDEFSTSVVKKCWGFMDIRIGNFRISYQDLRLYTVSSVDDATVCNDEKLASGSTAAYVNSAELFLQDTIFRENKRWPSVIWAPSNMIDSDEAPNLQISVLMDALPSSWRGTLVMLDQLYGYGYGWNTGNPTLGTLSGVKPVNEFSPATRDSGLERMERYRQRDPRVTFMSAFPV 1392
            MVSVSRP  AVFYLAAVT GTA NQGGPELNFRQHEHQP ASPMLPPFLEGQPERWQAR YGPDVRVAPHTAAGPGLRSASTGVPASFTIRLAG   SGARPEQQGEKNPDWDYNVDKKRFIYVWVASEDNVFVAGVRNNGNGTLTA YES FPGDYLVHVEDVNLKVQDHFGRGRPIIGSPFSLTVSGDPAVDVDALPVCGGEGEEEDLASSYWRTGSW+SSNIAARNHGVLRDGWVFQPKTCVYEAFSYDDLMLLAGLDEP WLLALGNSILRGIFLTILDMALAQGQKDEFSTSVVKKCWGF+DIRIGN RISYQDLRLYTVSSVDDATVCNDEKLASGSTAAYV+SAELFLQDTIFRENK WPSVIWAPSNMIDSDEAPNLQISVLMDALPSSWRGTLVMLDQLYGYGYGWNTGNPTL TLSGVKPVNEFSPATRDSGLERMERYRQRDPRVTFMSAFP+
Sbjct:    1 MVSVSRPGTAVFYLAAVTVGTAANQGGPELNFRQHEHQPPASPMLPPFLEGQPERWQARFYGPDVRVAPHTAAGPGLRSASTGVPASFTIRLAGVDASGARPEQQGEKNPDWDYNVDKKRFIYVWVASEDNVFVAGVRNNGNGTLTAAYESSFPGDYLVHVEDVNLKVQDHFGRGRPIIGSPFSLTVSGDPAVDVDALPVCGGEGEEEDLASSYWRTGSWVSSNIAARNHGVLRDGWVFQPKTCVYEAFSYDDLMLLAGLDEPAWLLALGNSILRGIFLTILDMALAQGQKDEFSTSVVKKCWGFIDIRIGNLRISYQDLRLYTVSSVDDATVCNDEKLASGSTAAYVSSAELFLQDTIFRENKPWPSVIWAPSNMIDSDEAPNLQISVLMDALPSSWRGTLVMLDQLYGYGYGWNTGNPTLATLSGVKPVNEFSPATRDSGLERMERYRQRDPRVTFMSAFPM 464          
BLAST of mRNA_Ecto-sp9_F_contig10498.464.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLN2_ECTSI)

HSP 1 Score: 409 bits (1051), Expect = 2.700e-136
Identity = 202/360 (56.11%), Postives = 264/360 (73.33%), Query Frame = 1
Query:  346 VDKKRFIYVWVASEDNVFVAGVRNNGNGTLTATYESYFPGDYLVHVEDV--NLKVQDHFGRGRP------IIGSPFSLTVSGDPAVDVDALPVCGGEGEEEDLASSYWRTGSWISSNIAARNHGVLRDGWVFQPKTCVYEAFSYDDLMLLA-GLDEPTWLLALGNSILRGIFLTILDMALAQGQKDEFSTSVVKKCWGFMDIRIGNFRISYQDLRLYTVS-SVDDATVCNDEKLASGSTAAYVNSAELFLQDTIFRENKRWPSVIWAPSNMIDSDEAPNLQISVLMDALPSSWRGTLVMLDQLYGYGYGWNTGNPTLGTLSGVKPVNEFSPATR-DSGLERMERYRQRDPRVTFMSAFPV 1392
            +D K F+YVW+AS D+V  A V +NG+GTLTATYES +PGDYLVHV+DV  ++ V    G+ RP      I+ SPF LT+SG+ AVDVD LP+C  E  +ED   ++WRTGSWISS  A+  HGVLRDGWVFQPKTCV++ FSYDDLMLLA G  EPTWLL LG S+ RG+FLT++DM LAQGQK +F+TS ++KCWGF ++R+GN R++YQDLRL+ V  + DD+ VC+D+KLA  + A +V +A  FL+ ++F   K+WPSVI AP  M DSDEA NL I+V+MDALPS+W GTL+M++ + G G+ +N  NPT  TL+ V P    S     D+GL R++RY+Q+D R  FMS FP+
Sbjct:    1 MDDKHFVYVWIASTDHVLHAAVVDNGDGTLTATYESPYPGDYLVHVQDVCTDMSVVGR-GKKRPGERAKAIVDSPFRLTISGEIAVDVDDLPLCDAEHPQEDEEDTFWRTGSWISSKFASAKHGVLRDGWVFQPKTCVHDTFSYDDLMLLATGSKEPTWLLILGTSVQRGVFLTLVDMVLAQGQKSDFATSAIQKCWGFAEVRVGNLRLTYQDLRLHEVGLAQDDSAVCHDDKLAINNVAVFVAAARRFLRRSVFAAGKQWPSVIMAPPFMEDSDEAANLPITVIMDALPSAWNGTLLMMEHMAGLGFTYNYDNPTAATLAEVNPTWHLSKFIGVDNGLGRIKRYQQQDARTKFMSTFPI 359          
BLAST of mRNA_Ecto-sp9_F_contig10498.464.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE0_ECTSI)

HSP 1 Score: 412 bits (1058), Expect = 4.550e-136
Identity = 206/400 (51.50%), Postives = 280/400 (70.00%), Query Frame = 1
Query:  214 AAGPGLRSASTGVPASFTIRLAG--TGGSGARPEQQGEKNPDWDYNVDKKRFIYVWVASEDNVFVAGVRNNG--NGTLTATYESYFPGDYLVHVEDVNLKVQDHFGRGRPIIGSPFSLTVSGD-PAVDVDALPVCGGEGE-EEDLASSYWRTGSWISSNIAARNHGVLRDGWVFQPKTCVYEAFSYDDLMLLAGLD-EPTWLLALGNSILRGIFLTILDMALAQGQKDEFSTSVVKKCWGFMDIRIGNFRISYQDLRLYTVSSVDDATVCNDEKLASGSTAAYVNSAELFLQDTIFRENKRWPSVIWAPSNMIDSDEAPNLQISVLMDALPSSWRGTLVMLDQLYGYGYGWNTGNPTLGTLSGVKPVNEFSPATRDSGLERMERYRQRDPRVTFMSAFPV 1392
            A+G GL  A+ G+ ASFTI+L G   GG G+ P        DW+ N    RFIYVW++S+D + +A V  +G  NGTLTATY+S FPGDYLVHVE+V    +   G G PI+GSPFSL ++GD P +DV +LPVCG + +   D+A ++WR G+W+S+N+A+  HGV+R GWVFQPK+CV++ FSY DLMLLA  D EPTWL+ +G S+ RG+FLT++DMALA GQKD+ +TSV++KCWG+ D+R+GN R++YQD+RLY VS   D+ VCN+EKL SGST+A+V+SA+ FL  T+FR+  +WP+ I APS ++      N  I VLMD+LP SW G L+ +D + G+   W  GNPT   L  V+        T D  L +M+ Y+ +DPRV+FMSAFP+
Sbjct:    2 ASGDGLHQATVGISASFTIQLVGDEVGGGGSLP--------DWEPN-SSFRFIYVWISSKDQILIAEVVGDGSNNGTLTATYKSDFPGDYLVHVEEVQPSER---GEGLPIVGSPFSLKIAGDFPTLDVHSLPVCGSQDDGSTDIADTFWRPGTWLSANVASAAHGVMRTGWVFQPKSCVFDTFSYQDLMLLASPDGEPTWLVVVGGSVQRGVFLTLVDMALAAGQKDDMATSVLEKCWGYADLRVGNLRLTYQDMRLYQVSGKTDSVVCNNEKLTSGSTSAFVHSAKDFLASTVFRDGTQWPATILAPSYLVPEKNV-NHMIEVLMDSLPPSWEGKLLFVDHMAGFSIHWTQGNPTRAALKDVRITATGRTPTDDVALRKMDGYQTQDPRVSFMSAFPM 388          
BLAST of mRNA_Ecto-sp9_F_contig10498.464.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8P1_9PHAE)

HSP 1 Score: 402 bits (1034), Expect = 1.930e-131
Identity = 203/397 (51.13%), Postives = 272/397 (68.51%), Query Frame = 1
Query:  259 SFTIRLAGT--GGSGARPEQQGEKNPDWDYNVDKKRFIYVWVASEDNVFVAGVRNNG--NGTLTATYESYFPGDYLVHVEDVNLKVQDHFGRGRPIIGSPFSLTVSGD-PAVDVDALPVCGGEGE-EEDLASSYWRTGSWISSNIAARNHGVLRDGWVFQPKTCVYEAFSYDDLMLLAGLD-EPTWLLALGNSILRGIFLTILDMALAQGQKDEFSTSVVKKCWGFMDIRIGNFRISYQDLRLYTVSSVDDATVCNDEKLASGSTAAYVNSAELFLQDTIFRENKRWPSVIWAPSNMIDSDEAPNL-----------QISVLMDALPSSWRGTLVMLDQLYGYGYGWNTGNPTLGTLSGVKPVNEFSPATRDSGLERMERYRQRDPRVTFMSAFPVS 1395
            SFTI L G   GG G+ P        DW+ N    RFIYVW+ S+D + +A V  +G  NGTLTATY+S FPGDYLVHVE+V    +   G G PI+GSPFSLT++GD P +DVD+LPVCG + +   D+A ++WR G+W+SSN+A+  HGV+R+GWVFQPK+CV++ FSY DLMLLA LD EPTWL+ +G S+ RG+FLT++DMALA GQKD+ +TSV++KCWG+ D+R+GN R++YQD+RLY VS   D+ VCN+EKL SGSTAA+V+SA+ FL  T FR+  +WP+ I APS ++  +    +              VLMD+LP SW G L+ +D + G+   W  GNPT   L  V+        T D  L +M+ Y+ +DPRV+F+SAFPVS
Sbjct:    2 SFTIELVGDEIGGGGSLP--------DWEPN-SSFRFIYVWICSKDQILIAEVVGDGSNNGTLTATYQSDFPGDYLVHVEEVQPSKR---GEGLPIVGSPFSLTITGDGPTLDVDSLPVCGSQDDGSNDIADTFWRPGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYQDLMLLASLDGEPTWLVVVGGSVQRGVFLTLVDMALAAGQKDDMATSVLQKCWGYADLRVGNLRLTYQDMRLYQVSGKTDSVVCNNEKLTSGSTAAFVHSAKEFLASTAFRDGTQWPATILAPSYLVPENNVNQMIEAYIRPASCAHAQVLMDSLPPSWEGKLLFVDHMAGFRIHWTQGNPTRTALMDVRITATGRTPTDDFALRKMDGYQTQDPRVSFISAFPVS 386          
BLAST of mRNA_Ecto-sp9_F_contig10498.464.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGZ7_9PHAE)

HSP 1 Score: 398 bits (1022), Expect = 8.320e-130
Identity = 203/425 (47.76%), Postives = 287/425 (67.53%), Query Frame = 1
Query:  145 LEGQPERWQARSYGPDVRVAPHTAAGPGLRSASTGVPASFTIRLAGTGGSGARPEQQGEKN---PDWDYNVDKKRFIYVWVASEDNVFVAGVRNNG--NGTLTATYESYFPGDYLVHVEDVNLKVQDHFGRGRPIIGSPFSLTVSGD-PAVDVDALPVCGG-EGEEEDLASSYWRTGSWISSNIAARNHGVLRDGWVFQPKTCVYEAFSYDDLMLLAGLD-EPTWLLALGNSILRGIFLTILDMALAQGQKDEFSTSVVKKCWGFMDIRIGNFRISYQDLRLYTVSSVDDATVCNDEKLASGSTAAYVNSAELFLQDTIFRENKRWPSVIWAPSNMIDSD-EAPNLQISVLMDALPSSWRGTLVMLDQLYGYGYGWNTGNPTLGTLSGVKPVNEFSPATRDSGLERMERYRQRDPRVTFMSAFPV 1392
             +G+P+  QA SY    R APHTA+G GL  A+ G+PASFTI+L G        +  G+ +   P+W+  +  +RFIYVW+A+ED +  A V + G  +GTLTATY+S FPG+Y VH+E+V L  +   G G PI+GSPFSLT++GD P ++V++LPVC   E    D+A ++WR G+W+SSN+A+  HGV+R+GWVFQPK+CV++ FSY+DLMLLA +  EPTWLL LG S+ RG+FLT++DM LA GQK    +SV+ KCWG+ D+R+GN R++YQD+RL+  +   D+  CN+EKL S ST+A V+SA  FL  T+F++  +WP+++ A S +I +  E     + VLMDA+P SW G L  +D + G G  W   NPT+  L  V    +      D+GL +M+ Y+ RDPRV+FMS FP+
Sbjct:   41 FQGKPDNEQAHSYRSHER-APHTASGDGLHKATVGMPASFTIQLVG--------DNLGDFHVLLPNWE-RIRSRRFIYVWIANEDQILTAEVVDGGRKDGTLTATYKSDFPGNYSVHIEEVQLSKK---GEGVPILGSPFSLTIAGDAPTLNVNSLPVCSSDEDANTDIADTFWRPGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASIGGEPTWLLVLGGSVERGVFLTLIDMVLAAGQKQGIRSSVLNKCWGYADVRVGNLRLTYQDMRLFRFTISTDSVACNNEKLTSESTSALVHSAGQFLASTVFQDGGQWPTMMMAASRLIPTRAEHTQFSVEVLMDAMPPSWEGKLFFVDHMAGLGNYWTEENPTMTALKNVGIWFDRMSPDDDNGLGKMDGYQTRDPRVSFMSVFPM 452          
BLAST of mRNA_Ecto-sp9_F_contig10498.464.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHZ4_ECTSI)

HSP 1 Score: 330 bits (845), Expect = 3.200e-104
Identity = 183/421 (43.47%), Postives = 247/421 (58.67%), Query Frame = 1
Query:  145 LEGQPERWQARSYGPDVRVAPHTAAGPGLRSASTGVPASFTIRLAGTGGSGARPEQQGEKNPDWDYNVDKKRFIYVWVASEDNVFVAGVRNNG--NGTLTATYESYFPGDYLVHVEDVNLKVQDHFGRGRPIIGSPFSLTVSGD-PAVDVDALPVCGG-EGEEEDLASSYWRTGSWISSNIAARNHGVLRDGWVFQPKTCVYEAFSYDDLMLLAGLD-EPTWLLALGNSILRGIFLTILDMALAQGQKDEFSTSVVKKCWGFMDIRIGNFRISYQDLRLYTVSSVDDATVCNDEKLASGSTAAYVNSAELFLQDTIFRENKRWPSVIWAPSNMIDSDEAPNLQISVLMDALPSSWRGTLVMLDQLYGYGYGWNTGNPTLGTLSGVKPVNEFSPATRDSGLERMERYRQRDPRVTFMSAFPV 1392
             +G+P+  QA SY    R APHTA+G GL  A+ G PASFTI+L G        +Q G   PDW  N    RFIYVW+A++D + +A V + G  NGTLTATY+S FPGDYLV++++V    +D    G PI+GSPFSLT++GD P +D+++LPVC   E   +D+A ++WR+G+W+SSN+A+  HGV+R+GWVFQPK+CV++ FSY+DLMLLA LD EPTWLL LG S+ RG+FLT++DM LA GQK +  +SV++KCWG+ D+R+GNFR++YQ                                                                      VLM ALP SW G L  +D + G+   W   NPT+  L  V+  +  S    D+GL +ME Y  RDPRV+FMS FP+
Sbjct:   38 FQGKPDNEQAHSYRSHER-APHTASGDGLHKATVGRPASFTIQLVG--------DQLGSL-PDWKPNTST-RFIYVWIANKDQILIAEVVDGGSKNGTLTATYKSDFPGDYLVYIDEVESSKKD---EGVPILGSPFSLTIAGDAPTLDINSLPVCSTHEDANKDIADTFWRSGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASLDGEPTWLLVLGGSVQRGVFLTLVDMVLAAGQKHDIRSSVIQKCWGYADVRVGNFRLTYQ----------------------------------------------------------------------VLMGALPPSWEGKLSFVDHMAGFEILWKEDNPTMTDLEDVRIWHLGSSPDDDNGLGKMEGYETRDPRVSFMSVFPM 374          
BLAST of mRNA_Ecto-sp9_F_contig10498.464.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGW9_9PHAE)

HSP 1 Score: 309 bits (792), Expect = 3.480e-96
Identity = 165/382 (43.19%), Postives = 237/382 (62.04%), Query Frame = 1
Query:  394 VFVAGVRNNG--NGTLTATYESYFPGDYLVHVEDVNLKVQDHFGRGRPIIGSPFSLTVSGD-PAVDVDALPVCGGEGE-EEDLASSYWRTGSWISSNIAARNHGVLRDGWVFQPKTCVYEAFSYDDLMLLAGLD-EPTWLLALGNSILRGIFLTILDMALAQGQKDEFSTSVVKKCWGFMDIRIGNFRISYQDL------RLYTVSSVD--------------------------------------DATVCNDEKLASGSTAAYVNSAELFLQDTIFRENKRWPSVIWAPSNMIDSDEAPNLQISVLMDALPSSWRGTLVMLDQLYGYGYGWNTGNPTLGTLSGVKPVNEFSPATRDSGLERMERYRQRDPRVTFMSAFPV 1392
            + +A V ++G  NGTLTATY+S FPGDYLV++++V    +D    G PI+GSPFSLT++GD P +DV++LPVC    +  +++A ++WR+G+W+SS++A+  HGV+R+GWVFQPK+CV++ FSY+DLMLLA LD EPTWLL LG S+ RG+FLT++DM LA GQK++  +SVV+KCWG+ D+R+GN R++YQ+       R   +S+++                                      D+ VCN+EKL SGSTAA+++SAE FL  TIFRE   WP+V+ APSN+I                 PS+  GT   ++++      W   NPT+  L  V+          D+GL +M+ Y  RDPRV+FMS FP+
Sbjct:   14 ILIAEVADDGSKNGTLTATYKSDFPGDYLVYIDEVESSKKD---EGVPILGSPFSLTIAGDAPTLDVNSLPVCSTHDDANKNIADTFWRSGTWLSSSVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASLDGEPTWLLVLGGSVQRGVFLTLIDMVLAAGQKNDIQSSVVQKCWGYADVRVGNLRLTYQEAVTDGLGRELAISALEWRQFHRELCWLRQLLFHNEAETNIMLLFFTNAGLSNSVDSLVCNNEKLMSGSTAAFIHSAEQFLASTIFREGGPWPTVVMAPSNLI-----------------PSNNEGTQFSVEEVL-----WKEENPTMTALEDVRMSYLSRSPDDDNGLGKMDGYETRDPRVSFMSVFPM 370          
BLAST of mRNA_Ecto-sp9_F_contig10498.464.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXD9_ECTSI)

HSP 1 Score: 303 bits (775), Expect = 8.550e-94
Identity = 156/321 (48.60%), Postives = 219/321 (68.22%), Query Frame = 1
Query:   67 PNQGGPELNFRQHEHQPRASPMLPPFLEGQPERWQARSYGPDVRVAPHTAAGPGLRSASTGVPASFTIRLAGT--GGSGARPEQQGEKNPDWDYNVDKKRFIYVWVASEDNVFVAGVRNNGN-GTLTATYESYFPGDYLVHVEDVNLKVQDHFGRGRPIIGSPFSLTVSGD-PAVDVDALPVCGGEGE-EEDLASSYWRTGSWISSNIAARNHGVLRDGWVFQPKTCVYEAFSYDDLMLLAGLD-EPTWLLALGNSILRGIFLTILDMALAQGQKDEFSTSVVKKCWGFMDIRIGNFRISYQDLRLY----TVSSVDDATV 999
            P    P L    H     AS   P F++G+P+  QA  Y  +   A HTA+G GL  A+ G+ ASFTI+L G   GGSG      G   P+W+ N    RFIYVW+++ED + +A +  +GN GTLTATY+S FPGDYLV+VE+V    Q   G G PI+GSPFSL ++GD P +DV++LPVC  + +   D+A ++WR G+W+SSN+A+  HGV+R+GWVFQPK+CV++ FSY DLMLLA LD EPTWL+ +G S+ RG+FLT++DM LA GQKD+ +TS + KCWG+ D+ +GN R++YQD+  Y    T+++++D ++
Sbjct:   28 PRDAPPSLRLEIHREL-SASANQPEFIQGRPDTDQAHGYSSNESAA-HTASGDGLHEATVGISASFTIQLVGDNLGGSG------GSSLPNWEPN-SSSRFIYVWISNEDQILIAEIVGDGNTGTLTATYKSDFPGDYLVYVEEVQPSEQ---GEGLPIVGSPFSLKIAGDFPTLDVNSLPVCDSQEDGSNDIADTFWRPGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYQDLMLLASLDGEPTWLVVVGGSVQRGVFLTLVDMVLAAGQKDDIATSTLGKCWGYTDLLVGNLRLTYQDVYWYEGNPTMAALEDVSI 336          
BLAST of mRNA_Ecto-sp9_F_contig10498.464.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K539_9PHAE)

HSP 1 Score: 280 bits (715), Expect = 3.300e-85
Identity = 150/292 (51.37%), Postives = 202/292 (69.18%), Query Frame = 1
Query:  115 PRASPMLPPFLEG--QPER-WQARSYGPDVRVAPHTAAGPGLRSASTGVPASFTIRLAGTGGSGARPEQQGEKNPDWDYNVDKKRFIYVWVAS--EDNVFVAGVRNNG--NGTLTATYESYFPGDYLVHVEDVNLKVQDHFGRGRPIIGSPFSLTVSGD-PAVDVDALPVCGG-EGEEEDLASSYWRTGSWISSNIAARNHGVLRDGWVFQPKTCVYEAFSYDDLMLLAGLD-EPTWLLALGNSILRGIFLTILDMALAQGQKDEFSTSVVKKCWGFMDIRIGNFRISYQDL 960
            P  SP+  P+      P R  QA SY   +  A HTA+G GL  A+ G  ASFTI+L G        +Q G   PDW  N    RFIYVW+A+  +D + +A V + G  NGTLTATY+S FPGDYLV++++V    +D    G PI+GSPFSLT++GD P +DV++LPVC   E   +D+  ++WR+G+W+SSN+A+  HGV+R+GWVFQPK+CV++ FSY+DLMLLA LD EPTWLL LG S+ RG+FLT++DM LA GQK +  +SVV+KCWG+ D+R+GN R++YQ L
Sbjct:    6 PSLSPLFWPYFSALTPPARDAQAHSYR-SLERASHTASGDGLHKATVGRSASFTIQLVG--------DQLGSL-PDWKPN-SSTRFIYVWIANKDQDEILIAEVADGGSKNGTLTATYKSDFPGDYLVYIDEVESSKKD---EGVPILGSPFSLTIAGDAPTLDVNSLPVCSTHEDTNKDIPDTFWRSGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASLDGEPTWLLVLGGSVQRGVFLTLIDMVLAAGQKHDIQSSVVQKCWGYADVRVGNLRLTYQVL 283          
BLAST of mRNA_Ecto-sp9_F_contig10498.464.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G348_ECTSI)

HSP 1 Score: 181 bits (458), Expect = 2.210e-48
Identity = 87/192 (45.31%), Postives = 124/192 (64.58%), Query Frame = 1
Query:  388 DNVFVAGVRNNG--NGTLTATYESYFPGDYLVHVEDVNLKVQDHFGRGRPIIGSPFSLTVSGDPAVDVDALPVCGGEGEEEDLASSYWRTGSWISSNIAARNHGVLRDGWVFQPKTCVYEAFSYDDLMLLAGLD-EPTWLLALGNSILRGIFLTILDMALAQGQKDEFSTSVVKKCWGFMDIRIGNFRISYQ 954
            + + +A V ++G  NGTLTATY+S FPG Y V++++V L  +D                                      D+A ++WR G+W+SSN+A+  HGVLR+GWVFQP +CV + FSY+DLMLLA LD EPTWLL LG S+ RG+FLT++DM LA GQK++  +SV++KCWG+ D+++GN R++YQ
Sbjct:   48 EQILIAEVVDDGSKNGTLTATYKSDFPGTYWVYIDEVELSRKD-----------------------------------ANNDIADTFWRPGTWLSSNVASAAHGVLRNGWVFQPISCVLDTFSYEDLMLLASLDKEPTWLLVLGGSVQRGVFLTLIDMVLAAGQKNDIISSVLRKCWGYADVQVGNLRLTYQ 204          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10498.464.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
Uncharacterized0.000e+095.91protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ62... [more]
Uncharacterized2.700e-13656.11protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized4.550e-13651.50protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.930e-13151.13protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized8.320e-13047.76protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized3.200e-10443.47protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized3.480e-9643.19protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized8.550e-9448.60protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXD9... [more]
Uncharacterized3.300e-8551.37protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized2.210e-4845.31protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10498contigEcto-sp9_F_contig10498:1572..4255 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score917.5
Seed ortholog evalue2.4e-264
Seed eggNOG ortholog2880.D8LJ62
EggNOG OGs2E5RD@1,2SCI8@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionImmunoglobulin E-set
Ec32 orthologEc-02_004900.1
Exons5
Model size1398
Cds size1398
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10498.464.1prot_Ecto-sp9_F_contig10498.464.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig10498 1572..4255 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928260.3888702-CDS-Ecto-sp9_F_contig10498:1571..17421622928260.3888702-CDS-Ecto-sp9_F_contig10498:1571..1742Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10498 1572..1742 +
1692277812.8136432-CDS-Ecto-sp9_F_contig10498:1571..17421692277812.8136432-CDS-Ecto-sp9_F_contig10498:1571..1742Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10498 1572..1742 +
1622928260.401166-CDS-Ecto-sp9_F_contig10498:2087..28701622928260.401166-CDS-Ecto-sp9_F_contig10498:2087..2870Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10498 2088..2870 +
1692277812.823093-CDS-Ecto-sp9_F_contig10498:2087..28701692277812.823093-CDS-Ecto-sp9_F_contig10498:2087..2870Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10498 2088..2870 +
1622928260.415345-CDS-Ecto-sp9_F_contig10498:3161..33711622928260.415345-CDS-Ecto-sp9_F_contig10498:3161..3371Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10498 3162..3371 +
1692277812.8310995-CDS-Ecto-sp9_F_contig10498:3161..33711692277812.8310995-CDS-Ecto-sp9_F_contig10498:3161..3371Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10498 3162..3371 +
1622928260.43312-CDS-Ecto-sp9_F_contig10498:3740..38091622928260.43312-CDS-Ecto-sp9_F_contig10498:3740..3809Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10498 3741..3809 +
1692277812.8399527-CDS-Ecto-sp9_F_contig10498:3740..38091692277812.8399527-CDS-Ecto-sp9_F_contig10498:3740..3809Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10498 3741..3809 +
1622928260.4510517-CDS-Ecto-sp9_F_contig10498:4090..42551622928260.4510517-CDS-Ecto-sp9_F_contig10498:4090..4255Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10498 4091..4255 +
1692277812.8490698-CDS-Ecto-sp9_F_contig10498:4090..42551692277812.8490698-CDS-Ecto-sp9_F_contig10498:4090..4255Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10498 4091..4255 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig10498.464.1

>prot_Ecto-sp9_F_contig10498.464.1 ID=prot_Ecto-sp9_F_contig10498.464.1|Name=mRNA_Ecto-sp9_F_contig10498.464.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=466bp
MVSVSRPAAAVFYLAAVTAGTAPNQGGPELNFRQHEHQPRASPMLPPFLE
GQPERWQARSYGPDVRVAPHTAAGPGLRSASTGVPASFTIRLAGTGGSGA
RPEQQGEKNPDWDYNVDKKRFIYVWVASEDNVFVAGVRNNGNGTLTATYE
SYFPGDYLVHVEDVNLKVQDHFGRGRPIIGSPFSLTVSGDPAVDVDALPV
CGGEGEEEDLASSYWRTGSWISSNIAARNHGVLRDGWVFQPKTCVYEAFS
YDDLMLLAGLDEPTWLLALGNSILRGIFLTILDMALAQGQKDEFSTSVVK
KCWGFMDIRIGNFRISYQDLRLYTVSSVDDATVCNDEKLASGSTAAYVNS
AELFLQDTIFRENKRWPSVIWAPSNMIDSDEAPNLQISVLMDALPSSWRG
TLVMLDQLYGYGYGWNTGNPTLGTLSGVKPVNEFSPATRDSGLERMERYR
QRDPRVTFMSAFPVS*
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mRNA from alignment at Ecto-sp9_F_contig10498:1572..4255+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig10498.464.1 ID=mRNA_Ecto-sp9_F_contig10498.464.1|Name=mRNA_Ecto-sp9_F_contig10498.464.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=2684bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10498:1572..4255+ (Ectocarpus species9 EcSCA_722f female)
ATGGTGTCGGTGTCGCGGCCCGCCGCCGCCGTGTTCTACTTGGCGGCGGT AACTGCGGGGACAGCACCGAACCAGGGCGGCCCAGAGTTGAATTTTCGTC AACATGAGCACCAGCCGCGAGCCTCGCCGATGCTGCCCCCCTTCCTCGAG GGTCAACCGGAGCGTTGGCAGGTACGTCCAGAAAGAACTGCTCACGGTGT TGTTGTAGATCCGTGGAGTTAGCATACTACTGCCGTTCCAGAACCCCGCG GAGACAGTAGTCGCAGAAGTGCCTCGAGAGCAACGCAAGTTTTTTTGTTG CAAAACCTCCGGGCAGCGCAGCCCCGTGTGGTTGGCGTATACGCGTGTGC ATCGCCGTACATGTTGCCCGCGTCGGTATTCGTGAGTGGGGTTGATTTGT TTGAAACCGGCGTACTGCAAAGTCTGCTCTTCGGCCCATCGCAGTGAGTG GTGTGGCTTTCAACCTACCCCTCTTTCATTATTTTTCCGCCGATCGTGCC GCGTCGCGATTACCAGGCACGGTCGTACGGCCCAGACGTACGCGTGGCGC CTCACACCGCGGCCGGGCCGGGGCTCCGCTCGGCGTCCACGGGGGTCCCG GCGTCCTTCACGATCCGATTGGCCGGCACCGGCGGCAGTGGGGCTCGGCC GGAGCAGCAGGGGGAGAAGAACCCCGACTGGGACTACAACGTGGACAAGA AGCGGTTCATCTACGTCTGGGTGGCGAGCGAGGACAACGTTTTCGTCGCC GGGGTGCGGAACAATGGCAACGGGACTCTCACCGCAACCTACGAGAGTTA CTTCCCGGGGGACTACCTCGTACACGTCGAAGACGTTAACCTGAAGGTCC AAGACCACTTCGGGCGGGGCAGGCCGATCATTGGGAGCCCGTTCTCCCTG ACCGTTTCGGGAGACCCTGCGGTGGACGTGGATGCCCTCCCGGTCTGCGG CGGAGAAGGCGAGGAGGAAGACTTGGCTTCGTCCTACTGGCGCACGGGCT CGTGGATCTCTTCGAACATTGCGGCCAGGAACCACGGCGTCCTGCGGGAC GGGTGGGTGTTCCAGCCCAAGACGTGCGTCTACGAGGCGTTCTCCTACGA CGACCTCATGCTCTTGGCCGGCCTGGACGAGCCCACGTGGCTTCTCGCCC TGGGGAACTCCATCTTGCGAGGCATCTTCTTGACGATCTTGGACATGGCT CTCGCCCAGGGACAGAAGGACGAGTTTTCCACCAGCGTCGTGAAGAAGTG TTGGGGGTTCATGGACATCCGTATCGGCAACTTCCGGATAAGCTACCAGG TGATTTTTCCGCGGGACGTTCTTGCTTGGCATCTTTGTGGGTGATTTTCC ACCAAAACCCTTGTCCTCTCTTTCCTGCCGTGTCTTCACTCGCGATGCAC TCTGCGAGTGATCGCGGTGTTTTTCGCTCCATGGCCCCGACTAGGTGAGA AGTAAACAAACAACGATTGGCCAGCGGTGATGGGTCCTGCGGGAACAATG CCCCGTCCTCTCGAGGACGCGTGGTCAATGGTCTAACTGCTAAGGCATGC AAAAACATAAGAGGTACACCCCCCTCCCCCCCCTCCCCAGGACCTCCGGC TATACACCGTATCCTCGGTAGATGATGCCACTGTTTGCAACGACGAGAAG CTCGCCAGCGGCAGCACGGCGGCGTACGTGAACTCCGCCGAGCTGTTCCT GCAAGACACAATCTTCCGTGAAAACAAGCGCTGGCCGTCCGTGATCTGGG CCCCGTCCAACATGATAGACTCGGACGAGGCCCCAAACTTGCAAATCAGC GTGAGTGGCTCGAAGGGGGAGGTGTGTTGTTTTGCATCGGGCGTGCTCTT GGAGATATTGGGCAACCCAGCTTGGCAAAAGCAGGGATCGGGCGGCAACT GATTCGAGTTGTCCTGGTTCTCAAGACTAAAACGTTGACAGCCTGACGAG GGAAACAGGATTGCGGAACCGTGTCGATATGAAGTTGCATCGCGGAATAG TTTTATCGTGTGACCCCCGATCGCCGTTTCTCTGTCTAGGAGGCACGGAT CGTAGGATATTCTGTAATCGACGGCACCAGATGGGGTCGTAAGAAGAGGG AGAGGCAGAGACAGACACAGAGAGAGCTTACATACGAAATTGTGCGATTC GCGCCGCTCGACACTTCAGGTGCTTATGGACGCGCTTCCTTCGAGCTGGA GAGGGACCCTCGTCATGTTGGACCAGCTTTACGGATATGTACGTGATGTG ATGCAGTTGCCGACACATGACAAACCCTGGTACAGATTTGTCCTTGCGTG ATACTGTTTCGCCCGCATTGTCCAGTAAAACACAACGAGACCATTCTTAC TATTCTAACTACACTGGTGGGTGTTGTGATGCCAAAATATTGCATCCAGA GTAGTTGTCTTGCGCTCTTAGCAGAATTCCAAATTCGTTTCTGGACAAGC ATGCACGATTCACCACCGAGCGGTTCTTCTCTCTCCTCACACGCGTCCTC TGTTACCGAACCCATCCAGGGCTACGGCTGGAACACGGGAAACCCTACCC TGGGGACTCTGAGCGGGGTCAAGCCTGTAAACGAGTTCAGTCCCGCAACG AGAGATAGCGGGCTCGAGAGGATGGAGCGATACCGACAGCGAGACCCCCG TGTGACCTTCATGAGCGCGTTCCCTGTGAGTTAA
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig10498:1572..4255+

>mRNA_Ecto-sp9_F_contig10498.464.1 ID=mRNA_Ecto-sp9_F_contig10498.464.1|Name=mRNA_Ecto-sp9_F_contig10498.464.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2796bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10498:1572..4255+ (Ectocarpus species9 EcSCA_722f female)
ATGGTGTCGGTGTCGCGGCCCGCCGCCGCCGTGTTCTACTTGGCGGCGGT
AACTGCGGGGACAGCACCGAACCAGGGCGGCCCAGAGTTGAATTTTCGTC
AACATGAGCACCAGCCGCGAGCCTCGCCGATGCTGCCCCCCTTCCTCGAG
GGTCAACCGGAGCGTTGGCAGATGGTGTCGGTGTCGCGGCCCGCCGCCGC
CGTGTTCTACTTGGCGGCGGTAACTGCGGGGACAGCACCGAACCAGGGCG
GCCCAGAGTTGAATTTTCGTCAACATGAGCACCAGCCGCGAGCCTCGCCG
ATGCTGCCCCCCTTCCTCGAGGGTCAACCGGAGCGTTGGCAGGCACGGTC
GTACGGCCCAGACGTACGCGTGGCGCCTCACACCGCGGCCGGGCCGGGGC
TCCGCTCGGCGTCCACGGGGGTCCCGGCGTCCTTCACGATCCGATTGGCC
GGCACCGGCGGCAGTGGGGCTCGGCCGGAGCAGCAGGGGGAGAAGAACCC
CGACTGGGACTACAACGTGGACAAGAAGCGGTTCATCTACGTCTGGGTGG
CGAGCGAGGACAACGTTTTCGTCGCCGGGGTGCGGAACAATGGCAACGGG
ACTCTCACCGCAACCTACGAGAGTTACTTCCCGGGGGACTACCTCGTACA
CGTCGAAGACGTTAACCTGAAGGTCCAAGACCACTTCGGGCGGGGCAGGC
CGATCATTGGGAGCCCGTTCTCCCTGACCGTTTCGGGAGACCCTGCGGTG
GACGTGGATGCCCTCCCGGTCTGCGGCGGAGAAGGCGAGGAGGAAGACTT
GGCTTCGTCCTACTGGCGCACGGGCTCGTGGATCTCTTCGAACATTGCGG
CCAGGAACCACGGCGTCCTGCGGGACGGGTGGGTGTTCCAGCCCAAGACG
TGCGTCTACGAGGCGTTCTCCTACGACGACCTCATGCTCTTGGCCGGCCT
GGACGAGCCCACGTGGCTTCTCGCCCTGGGGAACTCCATCTTGCGAGGCA
TCTTCTTGACGATCTTGGACATGGCTCTCGCCCAGGGACAGAAGGACGAG
TTTTCCACCAGCGTCGTGAAGAAGTGTTGGGGGTTCATGGACATCCGTAT
CGGCAACTTCCGGATAAGCTACCAGGCACGGTCGTACGGCCCAGACGTAC
GCGTGGCGCCTCACACCGCGGCCGGGCCGGGGCTCCGCTCGGCGTCCACG
GGGGTCCCGGCGTCCTTCACGATCCGATTGGCCGGCACCGGCGGCAGTGG
GGCTCGGCCGGAGCAGCAGGGGGAGAAGAACCCCGACTGGGACTACAACG
TGGACAAGAAGCGGTTCATCTACGTCTGGGTGGCGAGCGAGGACAACGTT
TTCGTCGCCGGGGTGCGGAACAATGGCAACGGGACTCTCACCGCAACCTA
CGAGAGTTACTTCCCGGGGGACTACCTCGTACACGTCGAAGACGTTAACC
TGAAGGTCCAAGACCACTTCGGGCGGGGCAGGCCGATCATTGGGAGCCCG
TTCTCCCTGACCGTTTCGGGAGACCCTGCGGTGGACGTGGATGCCCTCCC
GGTCTGCGGCGGAGAAGGCGAGGAGGAAGACTTGGCTTCGTCCTACTGGC
GCACGGGCTCGTGGATCTCTTCGAACATTGCGGCCAGGAACCACGGCGTC
CTGCGGGACGGGTGGGTGTTCCAGCCCAAGACGTGCGTCTACGAGGCGTT
CTCCTACGACGACCTCATGCTCTTGGCCGGCCTGGACGAGCCCACGTGGC
TTCTCGCCCTGGGGAACTCCATCTTGCGAGGCATCTTCTTGACGATCTTG
GACATGGCTCTCGCCCAGGGACAGAAGGACGAGTTTTCCACCAGCGTCGT
GAAGAAGTGTTGGGGGTTCATGGACATCCGTATCGGCAACTTCCGGATAA
GCTACCAGGACCTCCGGCTATACACCGTATCCTCGGTAGATGATGCCACT
GTTTGCAACGACGAGAAGCTCGCCAGCGGCAGCACGGCGGCGTACGTGAA
CTCCGCCGAGCTGTTCCTGCAAGACACAATCTTCCGTGAAAACAAGCGCT
GGCCGTCCGTGATCTGGGCCCCGTCCAACATGATAGACTCGGACGAGGCC
CCAAACTTGCAAATCAGCGACCTCCGGCTATACACCGTATCCTCGGTAGA
TGATGCCACTGTTTGCAACGACGAGAAGCTCGCCAGCGGCAGCACGGCGG
CGTACGTGAACTCCGCCGAGCTGTTCCTGCAAGACACAATCTTCCGTGAA
AACAAGCGCTGGCCGTCCGTGATCTGGGCCCCGTCCAACATGATAGACTC
GGACGAGGCCCCAAACTTGCAAATCAGCGTGCTTATGGACGCGCTTCCTT
CGAGCTGGAGAGGGACCCTCGTCATGTTGGACCAGCTTTACGGATATGTG
CTTATGGACGCGCTTCCTTCGAGCTGGAGAGGGACCCTCGTCATGTTGGA
CCAGCTTTACGGATATGGCTACGGCTGGAACACGGGAAACCCTACCCTGG
GGACTCTGAGCGGGGTCAAGCCTGTAAACGAGTTCAGTCCCGCAACGAGA
GATAGCGGGCTCGAGAGGATGGAGCGATACCGACAGCGAGACCCCCGTGT
GACCTTCATGAGCGCGTTCCCTGTGAGTTAAGGCTACGGCTGGAACACGG
GAAACCCTACCCTGGGGACTCTGAGCGGGGTCAAGCCTGTAAACGAGTTC
AGTCCCGCAACGAGAGATAGCGGGCTCGAGAGGATGGAGCGATACCGACA
GCGAGACCCCCGTGTGACCTTCATGAGCGCGTTCCCTGTGAGTTAA
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