mRNA_Ecto-sp9_F_contig1042.405.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig1042.405.1 vs.
Match: LRR-GTPase (of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJS7_ECTSI) HSP 1 Score: 895 bits (2312), Expect = 1.100e-303 Identity = 497/754 (65.92%), Postives = 538/754 (71.35%), Query Frame = 1
Query: 4 AALWDYTQNVQDVDHKERGHSMSGGPMPSQLCRLLDMLDSVEAKDRKNGGFGPGLSLNDNPWAEPPESIVAKGP-SIRGYFEDLYAEHFRIKRRGVKVVLVGQEGAGKTSLCRSMKANKATPTGEWKEESTVFADVEPMELEGSCVRVYDCAGQVAYTGLLQMFLTPRSVCVLACNAGEFGEQLDSDNIDQVEEDCRKLGALRVCDWLRSMSRRVPDNGVILVATKCDLAGGNAREIGRRMEKACRRWLSSWARHGMLSVRLEPGVCLTSCFPVGVGEHGESSRENLPSKDCWACDWRDVEGDEPSPSLIYRLVNKPDEGGLQGVQMVLPRSWDIALTFLDSLEHGRDPVEMVMLKSPDSDGGATETAVGKTTMYQGITVEELSAKWQETVDELGRRGITVTIAENALEGALSVREFDGSLVRHEKFVFLDVVWLARILKPLLNHKDQEMFDGRVNLWDTGDTRITLNDSSDIASWDSRRR--------AYSNRGWCIPCGRMVCPTMC-FRLLHPWVS-LSHSKTILLRAW*------------FC*G*SHTAPRMWAK*SIPSAWGSPRHSAPVGRSSSVYRLVRSKKC*HGA--------AVLVVCKHSGDTGCLCMAASASKMSAGHLLWXXXXXXXXTSLLLNFSAISTPQGRGWRCHSSCLQ*A*CSWIFQDCAGKAL*YVLSMVTGCSL*TRRLEMETNFWKRECPHCSADTGGLGAAAIDLLRFVDIRLDRDVIFNEVKARFDDLE 2172
+ALWD+TQNVQDVDHKERGHSM GGPMPSQLCRLLD+ DSVEA+ + G GP LSL++NPWAEPPESIVAKGP SIRGYFEDLYAEH RIKRRGVKVVLVGQEGAGKTSL +SMKANKAT TGEWKE STV ADVE MELEGS VRVYDCAGQVAYTGLLQMFLTPRSVCVL CNAGEFGEQL SDNIDQVEEDCRKL ALRVC+WLRS+SRRVPD VILVATKCDLAGGNA EIGRRMEKACRRWLSSWA MLSVRLEPGVCLTSCFPVG GEHGESS EN SK CWACDWRDV G EPSPSLIYRLVNKPD+GGL+GVQMVLPRSWDIALTFLDSLEHGRDPVEMV+LKSPDSD GATETA KTT+YQGITVEELSAKWQETVD LGRRGITVT AENALEGALS+REFDGSLV HEKFVFLDVVWLARILKPLLNHKDQEMFDGRVNL DTGDTRITL+DS+DIASWD ++ AY+ W V PT+ L+ P + + +LLR FC G + W + V R HG VV ++S L + G + +L++F G GW+ + C Q G + +V TR + + CP CSADTGGLGAAAIDLLRFVDIRLDRDVIFNEVKARF+DLE
Sbjct: 250 SALWDHTQNVQDVDHKERGHSMPGGPMPSQLCRLLDIFDSVEAQGLNDTGIGPSLSLSENPWAEPPESIVAKGPKSIRGYFEDLYAEHCRIKRRGVKVVLVGQEGAGKTSLRQSMKANKATLTGEWKENSTVLADVESMELEGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAGEFGEQLGSDNIDQVEEDCRKLEALRVCNWLRSISRRVPDTEVILVATKCDLAGGNAWEIGRRMEKACRRWLSSWACRNMLSVRLEPGVCLTSCFPVGAGEHGESSSENFLSKSCWACDWRDVGGGEPSPSLIYRLVNKPDKGGLRGVQMVLPRSWDIALTFLDSLEHGRDPVEMVILKSPDSDRGATETA--KTTVYQGITVEELSAKWQETVDGLGRRGITVTNAENALEGALSIREFDGSLVPHEKFVFLDVVWLARILKPLLNHKDQEMFDGRVNLGDTGDTRITLDDSADIASWDRLKKEGVLEPRLAYAI--WPNGLSEYVLPTLASLGLIFPLENDPAEGLVVLLRLKPHRPESVGKVIDTFCSGLTPAFRASWKIFLGVPPGAIEKVLTRCCGLGGVQTFWRYGVLVHGGLGVQDERRTFAVVVEYSSTDNELIAQIFGDVSTPGPWGATSYVMSAVSLMLVDF------PGLGWKGYLECPQ-----------HGDGMLFVNKA-------TR--DGDKFLEGSRCPQCSADTGGLGAAAIDLLRFVDIRLDRDVIFNEVKARFNDLE 973
BLAST of mRNA_Ecto-sp9_F_contig1042.405.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L650_9PHAE) HSP 1 Score: 783 bits (2021), Expect = 1.020e-267 Identity = 391/478 (81.80%), Postives = 417/478 (87.24%), Query Frame = 1
Query: 1 VAALWDYTQNVQDVDHKERGHSMSGGPMPSQLCRLLDMLDSVEAKDRKNGGFGPGLSLNDNPWAEPPESIVAKG-PSIRGYFEDLYAEHFRIKRRGVKVVLVGQEGAGKTSLCRSMKANKATPTGEWKEESTVFADVEPMELEGSCVRVYDCAGQVAYTGLLQMFLTPRSVCVLACNAGEFGEQLDSDNIDQVEEDCRKLGALRVCDWLRSMSRRVPDNGVILVATKCDLAGGNAREIGRRMEKACRRWLSSWARHGMLSVRLEPGVCLTSCFPVGVGEHGESSRENLPSKDCWACDWRDVEGDEPSPSLIYRLVNKPDEGGLQGVQMVLPRSWDIALTFLDSLEHGRDPVEMVMLKSPDSDGGATETAVGKTTMYQGITVEELSAKWQETVDELGRRGITVTIAENALEGALSVREFDGSLVRHEKFVFLDVVWLARILKPLLNHKDQEMFDGRVNLWDTGDTRITLNDSSDIASWD 1431
+ ALWD+TQNVQDV+H + G SMSGGPMPSQLCRLLD+L+S EA G LSLN NPWAEPPESIVAKG S+RGYFEDL+A+H RIKRRGVKVVLVGQEGAGKTSL +SMKANKATPTGEWKEESTVFADVEPM+LEGS VRVYDCAGQVAYTGLLQMFLTPRSVCVL CNAGEF +QL SDNIDQVEEDCRKL LRVCDWLRS+S RVP N VILVATKCDL GN E G+R+E ACR WLSSW R+GM SVRLE V LTSCFP+G EHGES R N K WACDWRDVEGD SPSL+YRLVNKPD+GGL+GVQMVLPRSWD+ALTFLDSLE+GR PVEMVMLKSPDSD GATETA G TT+YQGITVEELSA+WQ TVDELGRRGITVT AENALEGALS+REFDGSLV HEKFVFLDVVWLARILKPLLNHKDQEMFDGRVNL DTGDTRITL+D SDIASWD
Sbjct: 87 LTALWDHTQNVQDVNH-DGGDSMSGGPMPSQLCRLLDLLESREA--------GRHLSLNSNPWAEPPESIVAKGLKSVRGYFEDLFADHCRIKRRGVKVVLVGQEGAGKTSLRQSMKANKATPTGEWKEESTVFADVEPMKLEGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAGEFRQQLGSDNIDQVEEDCRKLEGLRVCDWLRSISCRVPGNDVILVATKCDLVNGNVEETGQRIEHACRTWLSSWVRNGMDSVRLERHVSLTSCFPIGASEHGESRRGNHALKQGWACDWRDVEGDMSSPSLLYRLVNKPDQGGLRGVQMVLPRSWDVALTFLDSLEYGRHPVEMVMLKSPDSDSGATETAGGTTTVYQGITVEELSARWQGTVDELGRRGITVTNAENALEGALSIREFDGSLVCHEKFVFLDVVWLARILKPLLNHKDQEMFDGRVNLGDTGDTRITLDDPSDIASWD 555
BLAST of mRNA_Ecto-sp9_F_contig1042.405.1 vs.
Match: LRR-GTPase (of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA1_ECTSI) HSP 1 Score: 780 bits (2015), Expect = 5.510e-263 Identity = 452/765 (59.08%), Postives = 494/765 (64.58%), Query Frame = 1
Query: 4 AALWDYTQNVQDVDHKERGHSMSGGPMPSQLCRLLDMLDSVEAKDRKNGGFGPGLSLNDNPWAEPPESIVAKGP-SIRGYFEDLYAEHFRIKRRGVKVVLVGQEGAGKTSLCRSMKANKATPTGEWKEESTVFADVEPMELEGSCVRVYDCAGQVAYTGLLQMFLTPRSVCVLACNAGEFGEQLDSDNIDQVEEDCRKLGALRVCDWLRSMSRRVPDNGVILVATKCDLAGGNAREIGRRMEKACRRWLSSWARHGMLSVRLEPGVCLTSCFPVGVGEHGESSRENLPSKDCWACDWRDVEGDEPSPSLIYRLVNKPDEGGLQGVQMVLPRSWDIALTFLDSLEHGRDPVEMVMLKSPDSDGGATETAVGKTTMYQGITVEELSAKWQETVDELGRRGITVTIAENALEGALSVREFDGSLVRHEKFVFLDVVWLARILKPLLNHKDQEMFDGRVNLWDTGDTRITLNDSSDIASWD--------SRRRAYSNRGWCIPCGRMVCPTMC-FRLLHPWVS-LSHSKTILLRAW*FC*G*SHTAPRMWAK*SIPSAWGSPRHSAPVGRSSSVYRLVRSKKC*HGAA--VLVVCKHSGDTGCLCMAASASKMSAGHLLWXXXXXXXXTSLLLNFSAISTPQGRGWRC---HSSCLQ*A*CSWIFQDCAGKAL*YVLSMVTG-------------------CSL*TRRLEMETN-------FWKRECPHCSADTGGLGAAAIDLLRFVDIRLDRDVIFNEVKARFDDLE 2172
AALWD+TQNVQDV HKE G M GG MPSQLCRLL +LD + G L+L NPWAEPPESIVAKGP SIRGYFEDLYAE IKR VKVVLVGQEGAGKTSL +SMKANKATPTGEWKEESTVFADVEPMELEGS VRVYDCAGQVAYTGLLQMFLTPRSVCVL CNAGEFG+QL SDN+DQVEEDCRKL ALRVCDWLRS+SRRVP N VILVATKCDL GNA E GRR+E ACR WLS+W R+GM VRLEP V LTSCFP+G GEHGES+ + SK WACDWR VEGD+ SPSL+YRLVNKPDEGGL+GVQMVLPRSWDIALT L++LEHGRDPVEMV+LKSPDS+ TET VGKT +YQ I VEEL W+ETVDELG+RGI VT AENALEGALS+REFDGSLVRHEKFVFLDVVWLARILKPLLNHKDQ FDGRVNL DTGD RITL+DSSDIASW R AY+ W V PT+ L P + +LLR P A +++ S ++ V GA VL C GD W +L + GRG S + IF D + A LS VT C + T F +R CP CS T GLGAAAIDL+R VDIRLDR VI EVKARFD LE
Sbjct: 39 AALWDHTQNVQDVHHKEGGDIMPGGAMPSQLCRLLVVLDRLS---------GVNLALLGNPWAEPPESIVAKGPKSIRGYFEDLYAEPCWIKRSSVKVVLVGQEGAGKTSLRQSMKANKATPTGEWKEESTVFADVEPMELEGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAGEFGQQLGSDNVDQVEEDCRKLQALRVCDWLRSISRRVPGNDVILVATKCDLVSGNAEETGRRLEHACRMWLSTWVRNGMDPVRLEPHVSLTSCFPIGDGEHGESNTGSDASKQGWACDWRHVEGDKSSPSLLYRLVNKPDEGGLRGVQMVLPRSWDIALTVLEALEHGRDPVEMVLLKSPDSERRPTETGVGKTNVYQAIKVEELGTNWRETVDELGKRGIVVTNAENALEGALSIREFDGSLVRHEKFVFLDVVWLARILKPLLNHKDQRTFDGRVNLGDTGDARITLDDSSDIASWGRLKNEGVLEPRLAYAM--WPDGLSEYVLPTLASLGLTFPLEGDPDNGLVVLLRL----------EPNRPASVGEAIDTFCSKYTPAFSASWEIFLGVPP-----GAIEKVLTRCCGLGDV---------------QTFWRYG--------VLVHGGLGDLDGRGIFAVVTEYSSTNNELTAQIFGDISTSAPWVALSYVTSAVSLMLMDFPGLRWNGSLKCPQHGYEMPFATKVNCAGDKFLERRCPRCSPQTRGLGAAAIDLIRMVDIRLDRGVIDREVKARFDVLE 754
BLAST of mRNA_Ecto-sp9_F_contig1042.405.1 vs.
Match: LRR-GTPase (of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF46_ECTSI) HSP 1 Score: 739 bits (1909), Expect = 1.300e-243 Identity = 427/768 (55.60%), Postives = 485/768 (63.15%), Query Frame = 1
Query: 7 ALWDYTQNVQDVDHKERGHSMSGGPMPSQLCRLLDMLDSVEAKDRKNGGFGPGLSLNDNPWAEPPESIVAKGP-SIRGYFEDLYAEHFRIKRRGVKVVLVGQEGAGKTSLCRSMKANKATPTGEWKEESTVFADVEPMELEGSCVRVYDCAGQVAYTGLLQMFLTPRSVCVLACNAGEFGEQLDSDNIDQVE-EDCRKLGALRVCDWLRSMSRRVPDNGVILVATKCDLAGGNAREIGRRMEKACRRWLSSWARHGMLSVRLEPGVCLTSCFPVGVGEHGESSRENLPSKDCWACDWRDVEGDEPSPSLIYRLVNKPDEGGLQGVQMVLPRSWDIALTFLDSLEHGRDPVEMVMLKSPDSDGGATETAVGKTTMYQGITVEELSAKWQETVDELGRRGITVTIAENALEGALSVREFDGSLVRHEKFVFLDVVWLARILKPLLNHKDQEMFDGRVNLWDTGDTRITLNDSSDIASWDSRRRA------YSNRGWCIPCGRMVCPTMC-FRLLHPWVSLSHSKTILLRAW*FC*G*SHTAPRMWAK*SIPSAWGS------PRHSAPVGRSSSVYRLVRSKKC*HGAA--VLVVCKHSGDT------GCLCMAASASKMSAGHLLWXXXXXXXXTSLLLN-FSAISTPQGRGWRCHSSCLQ*A*CSWIFQDCAGKAL*YVLSMVT------------GC----------SL*TRRLEMETNFWKRECPHCSADTGGLGAAAIDLLRFVDIRLDRDVIFNEVKARFDDLE 2172
ALWD+TQ+VQD+D KERG SMSGG MPSQLCRLLD+LD V ++ + L NPW EPPES+VAKGP SIRGYFEDLYAE RI R VKVVLVGQEGAGKTSL +SMKANKA+PTG+W EESTVFA+VEPMEL+GS VRVYDCAGQVAYTGLLQMFLTPRSVCVL CNAGEFG++ S++ +VE EDCRKL LRVCDWLRS+SRRVPDN VILVATKCDL GGNA EIG RME +CR WLS W R+GM VRLEP VCLTSCFP+ VGEHGE S N K WACDWR+VE D+PSPS ++RLVNKPD GL+G QMVLPRSWD+AL L++LEHGRDPVE+V+ KSP+ D G GK +YQGITVEEL KWQETVDEL RRGITVT NALEGALS+REFDGSLVRHEKFVFLDVVWL+RILKPLLNHKDQ FDGRV L DTGDTRITL+D SDI SWD + +N W V PT+ L P + ++L + + P + G +H+ S ++ V GA VL C GD G L G L F ISTP W+ AL YV+S V+ GC + F +R+CP CS +T GLGAAAIDL+ VDIRLDRDVIF EVKARF LE
Sbjct: 323 ALWDHTQDVQDIDPKERGDSMSGGTMPSQLCRLLDVLDPVPSRY---------VGLGGNPWTEPPESVVAKGPKSIRGYFEDLYAEPCRITRSSVKVVLVGQEGAGKTSLRQSMKANKASPTGKWNEESTVFANVEPMELDGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAGEFGQRRGSEDCGEVEQEDCRKLEELRVCDWLRSISRRVPDNDVILVATKCDLVGGNAGEIGSRMENSCRTWLSGWVRNGMQPVRLEPHVCLTSCFPIRVGEHGERSAGNHVWKGGWACDWRNVEDDQPSPSFLHRLVNKPDGRGLRGAQMVLPRSWDVALAVLEALEHGRDPVEVVLRKSPEPDRGDETETGGKADVYQGITVEELGTKWQETVDELERRGITVTNMMNALEGALSIREFDGSLVRHEKFVFLDVVWLSRILKPLLNHKDQRTFDGRVKLGDTGDTRITLHDQSDIDSWDRLKSEGVLEPRLANAMWPHGLSEYVLPTLVSVGLTFPLEGDPDAGLVVL---------------LRLEPHRPESVGEVIDTFCSKHTPAFSASWEIFLGVPP-----GAIEKVLTRCCGLGDVQTFWRYGVLVHGGLGDLDGRGIFAVVVEYSSTDNELTAQIFGDISTPA----------------PWV-------ALSYVMSAVSLMLVDFPGLRWKGCLKCPQHGNEMPFANKVNRAGDKFLERKCPRCSPETRGLGAAAIDLVCLVDIRLDRDVIFREVKARFVVLE 1038
BLAST of mRNA_Ecto-sp9_F_contig1042.405.1 vs.
Match: LRR-GTPase (of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G431_ECTSI) HSP 1 Score: 717 bits (1851), Expect = 1.140e-237 Identity = 421/766 (54.96%), Postives = 483/766 (63.05%), Query Frame = 1
Query: 1 VAALWDYTQNVQDVDHKERGHSMSGGPMPSQLCRLLDMLDSVEAKDRKNGGFGPGLSLNDNPWAEPPESIVAKG-PSIRGYFEDLYAEHFRIKRRGVKVVLVGQEGAGKTSLCRSMKANKATPTGEWKEESTVFADVEPMELEGSCVRVYDCAGQVAYTGLLQMFLTPRSVCVLACNAGEFGEQLDSDNIDQVEEDCRKLGALRVCDWLRSMSRRVPDNGVILVATKCDLAGGNAREIGRRMEKACRRWLSSWARHGMLSVRLEPGVCLTSCFPVGVGEHGESSRENLPSKDCWACDWRDVEGDEPSPSLIYRLVNKPDEGGLQGVQMVLPRSWDIALTFLDSLEHGRDPVEMVMLKSPDSD-GGATETAVGKTTMYQGITVEELSAKWQETVDELGRRGITVTIAENALEGALSVREFDGSLVRHEKFVFLDVVWLARILKPLLNHKDQEMFDGRVNLWDTGDTRITLNDSSDIASWD--------SRRRAYSNRGWCIPCGRMVCPTMC-FRLLHPWVS-LSHSKTILLRAW*FC*G*SHTAPRMWAK*SIPSAWGS------PRHSAPVGRSSSVY--------RLVRSKKC*HGAAV------LVVCKHSGDTGCLCMAASASKMSA------GHLLWXXXXXXXXTSLLLNFSAISTP----QGRGWRCHSSCLQ*A*CSWIFQDCAGKAL*YVLSMVTGCSL*TRRLEMETNFWKRECPHCSADTGGLGAAAIDLLRFVDIRLDRDVIFNEVKARFDDLE 2172
++ALWD+TQNVQD D + G MSGG MP QLCRLLD+L+ + + L+ NPWAEPPESIV KG S+R YFEDLYAE RI+R KVVLVGQEGAGK+SL +SMKAN+ TPTGEWKEESTVFADVEPMELEGS VRVYDCAGQVAYTGLLQMFLTPRSVCVL CNA FG+QL+ N +VEEDCRKL LRVCDWLRS+SRRVP N VILV TKCDLAGGNA EIG R+E ACR WLSSW RHGM V+LEPGV TSCFP G+HGE EN SK WACDW D++ D P PSL++RLVNKPD GGL+G QMVLPRSWD L LDSLE GRDPVE+V+ KS D G ATETA G T +YQGITVE+LS KWQ+ VDEL RRGI VT A+NALEGALS+REFDGSLVRHE FVFLDV+WLARILKPLLNHKDQE FDGRVNL DTGD RITL+D IASW R AY+ W V PT+ L P L + +LLR K P + G RH+ + S +++ V ++ C GA ++V GD G + A + S+ G + +L SA+S G W C Q G A+ + + VT ET F KR CP CS +T GLGAAAIDLLR VDIR+DR IF+EV RFD L+
Sbjct: 60 ISALWDHTQNVQDEDQDKGGCGMSGGSMPGQLCRLLDVLERAK------------IVLDGNPWAEPPESIVDKGRKSMRSYFEDLYAEPCRIERISTKVVLVGQEGAGKSSLRQSMKANEPTPTGEWKEESTVFADVEPMELEGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAAAFGQQLERKNSGEVEEDCRKLEELRVCDWLRSISRRVPHNDVILVVTKCDLAGGNAAEIGERVEHACRTWLSSWVRHGMQPVQLEPGVSFTSCFPAEGGQHGEVGTENHGSKGDWACDWHDMKDDHPPPSLLHRLVNKPDGGGLRGAQMVLPRSWDTVLIVLDSLEQGRDPVEVVLRKSLHPDRGDATETAGGNTVVYQGITVEDLSKKWQKIVDELERRGIIVTNAKNALEGALSIREFDGSLVRHETFVFLDVLWLARILKPLLNHKDQETFDGRVNLGDTGDARITLDDPLYIASWGRLKNEGVLEPRLAYAM--WPGGLSEYVLPTLASLGLTFPLEGDLDEGQVVLLRL----------------KPERPDSVGEVIDTFCSRHTPALSASWNIFLGVPPGAIEKVLTRCCGLGAVQTFWRYGVLVHGGLGDLGGRGIFAVVLEYSSTDHKLNGQIFGDIGTPAPWVALSYVMSAVSLMLVDFPGLRWGGALKCPQ-----------HGDAM-LMANKVTQAG--------ET-FLKRRCPRCSTETKGLGAAAIDLLRMVDIRMDRGEIFDEVMERFDALK 774
BLAST of mRNA_Ecto-sp9_F_contig1042.405.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ8_9PHAE) HSP 1 Score: 711 bits (1835), Expect = 1.030e-236 Identity = 354/478 (74.06%), Postives = 396/478 (82.85%), Query Frame = 1
Query: 1 VAALWDYTQNVQDVDHKERGHSMSGGPMPSQLCRLLDMLDSVEAKDRKNGGFGPGLSLNDNPWAEPPESIVAKGP-SIRGYFEDLYAEHFRIKRRGVKVVLVGQEGAGKTSLCRSMKANKATPTGEWKEESTVFADVEPMELEGSCVRVYDCAGQVAYTGLLQMFLTPRSVCVLACNAGEFGEQLDSDNIDQVEEDCRKLGALRVCDWLRSMSRRVPDNGVILVATKCDLAGGNAREIGRRMEKACRRWLSSWARHGMLSVRLEPGVCLTSCFPVGVGEHGESSRENLPSKDCWACDWRDVEGDEPSPSLIYRLVNKPDEGGLQGVQMVLPRSWDIALTFLDSLEHGRDPVEMVMLKSPDSD-GGATETAVGKTTMYQGITVEELSAKWQETVDELGRRGITVTIAENALEGALSVREFDGSLVRHEKFVFLDVVWLARILKPLLNHKDQEMFDGRVNLWDTGDTRITLNDSSDIASW 1428
++ALWD+TQN +D+ H E MSGGPMPSQLCRLLD+LD ++ G F L L NPW EPPE IV KGP ++RGYFEDLYAE RIKR VKVVLVGQEGAGKTSL +SMKAN+ATPTGEWKEESTVFADVE MELEGS VRVYDCAGQVAYTGLLQMFLTPR+VCVL CNAG+FG+Q S++ DQV EDCRKL LRVCDWLRS+SRRVP+N VILVATKCDLAGGNA +IG RME ACRRWLSSW R+G+ VRLEP V LTSCF GVGEHGESS + K WACDWRD+ PSPSL++RLVNKPD GL+G QMVLPRSWDIALT L++LEHGRDPVE+V+ KSPD D G ATETA G+T MYQGITVE+LS KWQETVD L R G+TVT A+NALEGAL +REFDGSL+R+EKF+FLDVVWLA+ILKPLLNHKDQE FDG V+L DTGD RITL+D SDIASW
Sbjct: 104 LSALWDHTQNAEDIGHDEGTQRMSGGPMPSQLCRLLDVLDDIQ-----QGKF-QSLKLGTNPWVEPPEPIVVKGPKAVRGYFEDLYAEPCRIKRSIVKVVLVGQEGAGKTSLRQSMKANEATPTGEWKEESTVFADVEAMELEGSSVRVYDCAGQVAYTGLLQMFLTPRAVCVLVCNAGKFGQQTRSESNDQVGEDCRKLEELRVCDWLRSISRRVPNNDVILVATKCDLAGGNAGKIGARMEHACRRWLSSWVRNGLQPVRLEPCVSLTSCFETGVGEHGESSTGSHELKGGWACDWRDMADGNPSPSLLHRLVNKPDGRGLRGTQMVLPRSWDIALTVLEALEHGRDPVEVVLRKSPDPDRGDATETARGETAMYQGITVEDLSIKWQETVDGLERSGVTVTNAKNALEGALLIREFDGSLIRYEKFIFLDVVWLAKILKPLLNHKDQETFDGLVSLGDTGDARITLDDPSDIASW 575
BLAST of mRNA_Ecto-sp9_F_contig1042.405.1 vs.
Match: LRR-GTPase (of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC3_ECTSI) HSP 1 Score: 700 bits (1807), Expect = 3.590e-229 Identity = 414/749 (55.27%), Postives = 474/749 (63.28%), Query Frame = 1
Query: 1 VAALWDYTQNVQDVDHKERGHSMSGGPMPSQLCRLLDMLDSVEAKDRKNGGFGPGLSLNDNPWAEPPESIVAKGP-SIRGYFEDLYAEHFRIKRRGVKVVLVGQEGAGKTSLCRSMKANKATPTGEWKEESTVFADVEPMELEGSCVRVYDCAGQVAYTGLLQMFLTPRSVCVLACNAGEFGEQLDSDNIDQVEEDCRKLGALRVCDWLRSMSRRVPDNGVILVATKCDLAGGNAREIGRRMEKACRRWLSSWARHGMLSVRLEPGVCLTSCFPVGVGEHGESSRENLPSKDCWACDWRDVEGDEPSPSLIYRLVNKPDEGGLQGVQMVLPRSWDIALTFLDSLEHGRDPVEMVMLKSPD-SDGGATETAVGKTTMYQGITVEELSAKWQETVDELGRRGITVTIAENALEGALSVREFDGSLVRHEKFVFLDVVWLARILKPLLNHKDQEMFDGRVNLWDTGDTRITLNDSSDIASWDSRRRAYSNRG----------WCIPCGRMVCPTMC-FRLLHPWVS-LSHSKTILLRAW*FC*G*SHTAPRMWAK*SIPSAWGSPRHSAPVGRSSSVYRLVRSKKC*HG-------AAVLVVCKHSGDTGCLCMAASASKMSAGHLLWXXXXXXXXTSLLLNFSAISTPQGRGWRCHSSCLQ*A*CSWIFQDCAGKAL*YVLSMVT---GCSL*TRRLEMETNFWK-RECPHCSADTGGLGAAAIDLLRFVDIRLDRDVIFNEVKARFDDLE 2172
+ ALWD+T +QD+ H+E H MSGG +PSQLCRLLD+LD E GG LSL DNPWAEPPESIVAKGP SIRGYFEDLYAE R++R VKV+LVGQEGAGKTSL +SMK N+ATPTG+WKEESTVFADVEPMELEGS VRVYDCAGQ AYTGLLQMFLTPRSVCVL CNA FG+Q +D Q+ EDCRKL LRVC+WLRS++RRVPDN ILVATKCDL GGNA E+GRRME+ACR WL+SW R+GM VRLE GV LTSC P GEHGE N + W CDWR GD+ +P L++RLVNKPD GGL+G Q+VLPRSWDIALT L++LE GRDPVE+VM K + G A E YQGITVE+L AKW ETVDEL RR ITVT A+NALEGALS+REFDGSLVRHE FVFLDVVWLARILKPLLNHKD+E FDG VNL DTGDTR+TL D DI SW + N G W V PT+ L P + + +LLR C + IP+ S +G V ++ C G +AV V H G A SA + L T+ + F ISTP W S + S + +D G L L T+ F + CP CSADT GLGAAAIDL+R VDIRLDRD IF+EVK RF DLE
Sbjct: 179 LTALWDHTHYLQDIVHEEGAHGMSGGRIPSQLCRLLDVLDRAE------GGV---LSLEDNPWAEPPESIVAKGPKSIRGYFEDLYAEPCRVERSSVKVILVGQEGAGKTSLRQSMKTNEATPTGDWKEESTVFADVEPMELEGSSVRVYDCAGQAAYTGLLQMFLTPRSVCVLVCNAEAFGQQRANDTGGQIMEDCRKLEELRVCEWLRSIARRVPDNDAILVATKCDLVGGNAAEVGRRMEQACRMWLASWVRNGMQPVRLEHGVGLTSCRPTRFGEHGERGTANHTVEGGWVCDWRGHIGDDSAPGLLHRLVNKPDGGGLRGTQLVLPRSWDIALTVLEALESGRDPVEVVMHKLGNVGRGDAAEMTAANAGGYQGITVEDLIAKWLETVDELARREITVTSAKNALEGALSIREFDGSLVRHETFVFLDVVWLARILKPLLNHKDEESFDGLVNLGDTGDTRVTLEDPLDIVSWFRLK----NEGVIEPRLACALWPDGLSEHVLPTLASLGLTFPLENDPAEGLVVLLRQKPDCPESVGKVIDTFCSEHIPAF--SASWKIFLGVPPGAIEKVLTRCCNLGGVRTFWRSAVFVHGGHGYQGGHEMFAVVLEYSSANNEL---------TAKI--FGDISTPTP--WMALSYVMSAV--SLMMRDFPGLRSRGSLKCPQHGDAMLLATKVPRPGDKFLEGSRCPQCSADTRGLGAAAIDLVRMVDIRLDRDEIFHEVKERFVDLE 897
BLAST of mRNA_Ecto-sp9_F_contig1042.405.1 vs.
Match: LRR-GTPase (of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD0_ECTSI) HSP 1 Score: 687 bits (1773), Expect = 3.080e-224 Identity = 400/748 (53.48%), Postives = 472/748 (63.10%), Query Frame = 1
Query: 7 ALWDYTQNVQDVDHKERGHSMSGGPMPSQLCRLLDMLDSVEAKDRKNGGFGPGLSLNDNPWAEPPESIVAKGP-SIRGYFEDLYAEHFRIKRRGVKVVLVGQEGAGKTSLCRSMKANKATPTGEWKEESTVFADVEPMELEGSCVRVYDCAGQVAYTGLLQMFLTPRSVCVLACNAGEFGEQLDS-DNIDQVEEDCRKLGALRVCDWLRSMSRRVPDNGVILVATKCDLAGGNAREIGRRMEKACRRWLSSWARHGMLSVRLEPGVCLTSCFPVGVGEHGESSRENLPSKDCWACDWRDVEGDEPSPSLIYRLVNKPDEGGLQGVQMVLPRSWDIALTFLDSLEHGRDPVEMVMLKSPDSDGG-ATETAVGKTTMYQGITVEELSAKWQETVDELGRRGITVTIAENALEGALSVREFDGSLVRHEKFVFLDVVWLARILKPLLNHKDQEMFDGRVNLWDTGDTRITLNDSSDIASWDSRRRA------YSNRGWCIPCGRMVCPTMC-FRLLHPWVS-LSHSKTILLRAW*FC*G*SHTAPRMWAK*----------SIPSAWGSPRHSAPVGRSSSVYRLVRSKKC*HGAAVLVVCKHSGDTGCLCMAASASKMSAGHLLWXXXXXXXXTSLLLN-FSAISTPQGRGWRCHSSCLQ*A*CSWIFQDCAG-KAL*YVLSMVTGCSL*TRRLEMETNFWKRE---CPHCSADTGGLGAAAIDLLRFVDIRLDRDVIFNEVKARFDDLE 2172
ALW++T NV+D H+E HSM GG P QLCRLLD+LD E + L+L+DNPWAEPPESIVAKG +IRGYFEDLYAE R++R VK++LVGQEGAGKTSL +SMKA +ATPTGEWKEESTVFADVE MELEGS +RVYDCAGQVAYTGLLQMFLTPR+VCV+ CNA FG+Q + + QV+EDCRKL LRVCDWLRS+SRRVPDN VILVATKCD GGNA EIG+R+E A R WL+SW R GM VRLEPGVCLTSC V E GE S N + W CDWRD + D PSPSL++RLVNKPD GGL+G QMV+PRSWDIALT L++LE GRDPVEMV+ D+DGG AT TA KT +Y GIT E+L KWQE L R ITVT A+NALEGAL++REFDGSLVRHE FVFLDVVWLARILKPLLNHKD+E FDG VNL DTGDTR+TL D SDIASW + + + W V PT+ L P + + +LLR H P + K ++ ++W +G + V ++ C G + +G L + +G L F ISTP W S + S + D G ++ + G ++ + T E C CS DT GLGAAAIDL+R VDIRLDRDVIF EVKARF DLE
Sbjct: 251 ALWNHTLNVEDARHEEASHSMQGGSFPRQLCRLLDVLDRAERE--------VDLNLDDNPWAEPPESIVAKGAKNIRGYFEDLYAEPCRVQRSSVKIILVGQEGAGKTSLRKSMKAKEATPTGEWKEESTVFADVERMELEGSSIRVYDCAGQVAYTGLLQMFLTPRAVCVIVCNAESFGQQRGTCETGGQVKEDCRKLEELRVCDWLRSISRRVPDNDVILVATKCDSVGGNAGEIGKRIELASRMWLASWVRSGMQPVRLEPGVCLTSCCTTNVCEDGERSTRNQAMEGGWTCDWRDGKDDNPSPSLLHRLVNKPDGGGLRGAQMVIPRSWDIALTVLEALERGRDPVEMVVEDLGDADGGDATGTAACKTGLYHGITAEDLRTKWQEAAVGLAGRDITVTNADNALEGALAIREFDGSLVRHETFVFLDVVWLARILKPLLNHKDEETFDGLVNLGDTGDTRVTLEDPSDIASWGRLKNEGVLEPRLARKLWPNGLSEYVIPTIASLGLTFPLENDPAGGLVVLLRL-------EHDRPELVGKVIDTFCLDQTPALRASW-----KIFLGVPAGAIEKVLTRCCSLGGV-----QTFWRSGVLVHGGVGEQDRSGIFAVVLEYSPSDNELTAQIFGDISTPAP--WVALSYVVSAV--SLMLLDFPGLRSRGSLKCPQHGDAMPLANMVTRTGDKILEGSRCRQCSPDTRGLGAAAIDLVRMVDIRLDRDVIFREVKARFVDLE 969
BLAST of mRNA_Ecto-sp9_F_contig1042.405.1 vs.
Match: LRR-GTPase (of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC9_ECTSI) HSP 1 Score: 677 bits (1748), Expect = 9.240e-222 Identity = 403/756 (53.31%), Postives = 465/756 (61.51%), Query Frame = 1
Query: 1 VAALWDYTQNVQDVDHKERGHSMSGGPMPSQLCRLLDMLDSVEAKDRKNGGFGPGLSLNDNPWAEPPESIVAKGP-SIRGYFEDLYAEHFRIKRRGVKVVLVGQEGAGKTSLCRSMKANKATPTGEWKEESTVFADVEPMELEGSCVRVYDCAGQVAYTGLLQMFLTPRSVCVLACNAGEFGEQLDSDNIDQVEEDCRKLGALRVCDWLRSMSRRVPDNGVILVATKCDLAGGNAREIGRRMEKACRRWLSSWARHGMLSVRLEPGVCLTSCFPVGVGEHGESSRENLPSKDCWACDWRDVEGDEPSPSLIYRLVNKPDEGGLQGVQMVLPRSWDIALTFLDSLEHGRDPVEMVM--LKSPDSDGGATETAVGKTTMYQGITVEELSAKWQETVDELGRRGITVTIAENALEGALSVREFDGSLVRHEKFVFLDVVWLARILKPLLNHKDQEMFDGRVNLWDTGDTRITLNDSSDIASWDSRRRA------YSNRGWCIPCGRMVCPTMC-FRLLHPWVS-LSHSKTILLRAW*------------FC*G*SHTAPRMWAK*SIPSAWGSPRHSAPVGRSSSVYRLVRSKKC*HGAA--------VLVVCKHSGDTGCLCMAASASKMSAGHLLWXXXXXXXXTSLLLNFSAISTPQGRGWRCHSSCLQ*A*CSWIFQDCAGKAL*YVLSMV-TGCSL*TRRLEMETNFWKRECPHCSADTGGLGAAAIDLLRFVDIRLDRDVIFNEVKARFDDLE 2172
+ ALWD+TQN Q V+ E G+ GG +PSQLCRLLD+LD R GG L L+DNPWAEPP SIV+KGP SIRGYFEDLY E R++R VK++LVGQEGAGKTSL +SMKAN A PTGEWKEESTVFADVEPM+LEGS VRVYDCAGQVAYTGLLQMFLTPRSVCVL CNA FG+Q D QV+EDCRKL LRVCDWLRS+SRRVP+N VILVATKCDL GGNA E GRR+E+A R WL+SW GM VRLEPGVCLTSC VGE+GE S + S+ WACDWRD D P P L++RLVNKPD GL+G QMVLPRSWDIALT L++LE GRDPVE+V+ L PD + AT TA +T +YQGITVE L KWQE V L RRG+ VT A+NALEGALS+REFDGSLVRHE FVFLDVVWLARILKPLLNHKD+E FDG VNL DTGDTR+TL D DIASW + + W + V PT+ L P + + +LLR FC + W A + V RS HG VV ++S L + + +LL+F + + RG C Q G A+ V M G L +E + CP CS DT GLGAAAIDL+ VDIRLDRDVIF +VK RF +LE
Sbjct: 153 LTALWDHTQNAQHVE--EGGNRTLGGQLPSQLCRLLDVLD------RATGGI---LGLDDNPWAEPPASIVSKGPTSIRGYFEDLYVESSRVQRNSVKIILVGQEGAGKTSLRQSMKANAAIPTGEWKEESTVFADVEPMQLEGSFVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAEAFGQQRGDDTGGQVKEDCRKLEELRVCDWLRSVSRRVPNNDVILVATKCDLVGGNAEEFGRRIEQATRTWLASWVHDGMQPVRLEPGVCLTSCCASAVGENGEKSTGHNASERGWACDWRDDRDDMPPPGLVHRLVNKPDGSGLRGTQMVLPRSWDIALTVLEALERGRDPVEVVVEHLAEPDRED-ATRTAARQTGVYQGITVEALRVKWQEAVVGLARRGVNVTNAKNALEGALSIREFDGSLVRHEMFVFLDVVWLARILKPLLNHKDEETFDGLVNLGDTGDTRVTLEDPLDIASWGRLKNQGVLEPRLARTMWPNGLSKYVLPTLASLGLTFPLKNDPAGGLVVLLRLNPDRPERVGKVIDTFCLDQTPAFSTSWKIFLGVPAGAIEKVLTRCCSLGGVQTFWRSGVLVHGGLGDEDGHEIFAVVLEYSSSDNELTAQIFGDISTPAPWVALSYVISAVRLMLLDFPGL---RSRG---SLKCPQ-----------HGDAMLLVNKMTQAGVKL------LEPSG----CPQCSPDTRGLGAAAIDLVSMVDIRLDRDVIFRDVKQRFVELE 869
BLAST of mRNA_Ecto-sp9_F_contig1042.405.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSA3_9PHAE) HSP 1 Score: 615 bits (1586), Expect = 2.010e-205 Identity = 319/416 (76.68%), Postives = 332/416 (79.81%), Query Frame = 1
Query: 154 FGPGLSLNDNPWAEPPESIVAKGP-SIRGYFEDLYAEHFRIKRRGVKVVLVGQEGAGKTSLCRSMKANKATPTGEWKEESTVFADVEPMELEGSCVRVYDCAGQVAYTGLLQMFLTPRSVCVLACNAGEFGEQLDSDNIDQVEEDCRKLGALRVCDWLRSMSRRVPDNGVILVATKCDLAGGNAREIGRRMEKACRRWLSSWARHGMLSVRLEPGVCLTSCFPVGVGEHGESSRENLPSKDCWACDWRDVEGDEPSPSLIYRLVNKPDEGGLQGVQMVLPRSWDIALTFLDSLEHGRDPVEMVMLKSPDSDGGATETAVGKTTMYQGITVEELSAKWQETVDELGRRGITVTIAENALEGALSVREFDGSLVRHEKFVFLDVVWLARILKPLLNHKDQEMFDGRVNLWDTGDTRIT 1398
G LSLN NPWAEPPESIVAKGP SIR YFEDLYAEH RI RR VK+VLVGQEGAGK SL RSMKANKATPTGEWKEESTVFADVE MELEGS VRVYDCAGQVAYTGLLQMFLTPRSVCVL CNAGEF ++L SDNIDQVEEDCRKL LRVCDWLRS+SRRVP N VILVATKCDL GN E GRRME AC+ WLSSW R GM +VRLE V LTSCFP+ VGEHGESS N SK WACDWR +G RSWD ALTFLDS+EHGRD VEMVMLKSPDSD GA TAVGKTTMYQGITVEELSAKWQ TVD+LGRRGI T A+NALEGALS+REFDGSLV HEKFVFL+VVWLARILKPLLNHKDQ FDGRV L DTGDTRIT
Sbjct: 22 LGHNLSLNPNPWAEPPESIVAKGPKSIRRYFEDLYAEHCRIGRRSVKLVLVGQEGAGKMSLRRSMKANKATPTGEWKEESTVFADVETMELEGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAGEFEQRLRSDNIDQVEEDCRKLEGLRVCDWLRSISRRVPGNDVILVATKCDLVSGNVEETGRRMEHACQTWLSSWVRDGMDAVRLERHVSLTSCFPIVVGEHGESSPGNHASKQGWACDWR------------------------RG------RSWDFALTFLDSIEHGRDSVEMVMLKSPDSDSGAKATAVGKTTMYQGITVEELSAKWQGTVDDLGRRGIMFTNAKNALEGALSIREFDGSLVCHEKFVFLEVVWLARILKPLLNHKDQGAFDGRVKLGDTGDTRIT 407 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1042.405.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig1042.405.1 >prot_Ecto-sp9_F_contig1042.405.1 ID=prot_Ecto-sp9_F_contig1042.405.1|Name=mRNA_Ecto-sp9_F_contig1042.405.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=501bp MSGGPMPSQLCRLLDMLDSVEAKDRKNGGFGPGLSLNDNPWAEPPESIVAback to top mRNA from alignment at Ecto-sp9_F_contig1042:787..10307+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig1042.405.1 ID=mRNA_Ecto-sp9_F_contig1042.405.1|Name=mRNA_Ecto-sp9_F_contig1042.405.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=9521bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1042:787..10307+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1042:787..10307+ >mRNA_Ecto-sp9_F_contig1042.405.1 ID=mRNA_Ecto-sp9_F_contig1042.405.1|Name=mRNA_Ecto-sp9_F_contig1042.405.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=3006bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1042:787..10307+ (Ectocarpus species9 EcSCA_722f female)back to top |