mRNA_Ecto-sp9_F_contig10410.403.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig10410.403.1 vs.
Match: Glucose-6-phosphate (isomerase, cytosolic n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU67_ECTSI) HSP 1 Score: 351 bits (901), Expect = 6.870e-120 Identity = 200/222 (90.09%), Postives = 201/222 (90.54%), Query Frame = 1
Query: 1 MGFGHQRDGSNSLFGWGGSSS----WXXXXXXXXXXXXXXXXXXXX------DRRMGWTNKEWKKFTAGLRGHTDDYDKIWSSWVPFKVDTSGLQEVLKTKTSDLAIKTLAKLQTMAGQEDQAEETLLKLIRDPYNLGDVSWLAKSAAETAEWRRLVVHQKRIKNKHLKDVMALEDRSLALSAEFEGTILDYSRMNVSQLTMKLLLDLAKRQNLNKRVKVFF 636
MGFGHQRDG NSLFGWGGSSS W XXXXXXXXXXXXX DRRMGWTNKEWKKFTAGLRGHTDDYDKIWSSWVPFKVDTSGLQEVLKTKTSDLAIKTLAKLQTMAGQEDQAEETLLKLIRDPYNLGDVSWLAKSAAETAEWRRLVVHQKRIKNKHLKDVMALEDRSLALSAEFEGTILDYSRMNVSQLTMKLLLDLAKRQNLNKR+ F
Sbjct: 1 MGFGHQRDG-NSLFGWGGSSSSWGEWATGGTEGXXXXXXXXXXXXXXXXXPDDRRMGWTNKEWKKFTAGLRGHTDDYDKIWSSWVPFKVDTSGLQEVLKTKTSDLAIKTLAKLQTMAGQEDQAEETLLKLIRDPYNLGDVSWLAKSAAETAEWRRLVVHQKRIKNKHLKDVMALEDRSLALSAEFEGTILDYSRMNVSQLTMKLLLDLAKRQNLNKRITAMF 221
BLAST of mRNA_Ecto-sp9_F_contig10410.403.1 vs.
Match: Glucose-6-phosphate (isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C893_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 6.280e-17 Identity = 50/91 (54.95%), Postives = 62/91 (68.13%), Query Frame = 1
Query: 352 LKLIRDPYNLGDVSWLAKSAAETAEWRRLVVHQKRIKNKHLKDVMALEDRSLALSAEFEGTILDYSRMNVSQLTMKLLLDLAKRQNLNKRV 624
++ IRD Y+LG + KS + TAEWRRL H + IK HL+DVM R ALSAEFEG+ LDYSRM V+Q TM LL LA+RQNL ++
Sbjct: 3 MESIRDSYSLG-MKPQPKSVSATAEWRRLKAHARHIKRMHLRDVMGDAARCEALSAEFEGSFLDYSRMQVTQRTMDLLYALARRQNLKLKI 92
BLAST of mRNA_Ecto-sp9_F_contig10410.403.1 vs.
Match: Glucose-6-phosphate (isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFZ0_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 1.090e-16 Identity = 48/91 (52.75%), Postives = 62/91 (68.13%), Query Frame = 1
Query: 352 LKLIRDPYNLGDVSWLAKSAAETAEWRRLVVHQKRIKNKHLKDVMALEDRSLALSAEFEGTILDYSRMNVSQLTMKLLLDLAKRQNLNKRV 624
++ IRD Y+LG + KS TAEWRRL VH + I HL+DV+ + R ALSAEFEG+ LDYSRM V+Q TM LL LA+RQ L +++
Sbjct: 3 MESIRDTYSLG-LKPQPKSVTATAEWRRLKVHARHIAKMHLRDVLGVASRCEALSAEFEGSFLDYSRMQVTQRTMDLLYALARRQRLREKI 92
BLAST of mRNA_Ecto-sp9_F_contig10410.403.1 vs.
Match: Glucose-6-phosphate (isomerase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JRC9_FISSO) HSP 1 Score: 64.7 bits (156), Expect = 1.380e-8 Identity = 37/79 (46.84%), Postives = 49/79 (62.03%), Query Frame = 1
Query: 400 AKSAAETAEWRRLVVHQKRIKNKHLKDVMALEDRSLALSAEFEGTILDYSRMNVSQLTMKLLLDLAKRQNLNKRVKVFF 636
A + TAEW+RL H + I+ HL+ +M RS AL A +G LDYSR V+ TMKLL DLAKRQ+L +++ F
Sbjct: 193 ATLVSRTAEWKRLQKHAEYIQTTHLRQLMQDAVRSEALYATHDGVYLDYSRQRVTVETMKLLGDLAKRQDLRGKIEAMF 271
BLAST of mRNA_Ecto-sp9_F_contig10410.403.1 vs.
Match: Glucose-6-phosphate (isomerase n=1 Tax=Oryza meridionalis TaxID=40149 RepID=A0A0E0E036_9ORYZ) HSP 1 Score: 60.8 bits (146), Expect = 2.950e-7 Identity = 33/90 (36.67%), Postives = 53/90 (58.89%), Query Frame = 1
Query: 373 YNLGDVSWLAKSA--AETAEWRRLVVHQKRIKNKHLKDVMALEDRSLALSAEFEGTILDYSRMNVSQLTMKLLLDLAKRQNLNKRVKVFF 636
Y +G V+ +A SA +T +W+ L H I+ HL+D+M +R A++AE+EG LDYSR + TM+ L LA+ L ++++ F
Sbjct: 470 YEIGQVAVMASSALICDTEQWKGLQAHVGAIQKTHLRDLMDDAERCKAMTAEYEGIFLDYSRQRATGETMEKLFKLAEAAKLKEKIEKMF 559
BLAST of mRNA_Ecto-sp9_F_contig10410.403.1 vs.
Match: Glucose-6-phosphate (isomerase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V0L1_9CHLO) HSP 1 Score: 59.7 bits (143), Expect = 6.550e-7 Identity = 30/75 (40.00%), Postives = 48/75 (64.00%), Query Frame = 1
Query: 412 AETAEWRRLVVHQKRIKNKHLKDVMALEDRSLALSAEFEGTILDYSRMNVSQLTMKLLLDLAKRQNLNKRVKVFF 636
A T EW L H K I++ HL+D++ E+R+ L E G +D+SR N++++TM+LLL+LA+R L ++ F
Sbjct: 31 AYTPEWNALREHTKEIESLHLRDLLLDEERTDNLIREHNGLYVDFSRQNITEVTMQLLLNLAERAKLRSKMNAMF 105
BLAST of mRNA_Ecto-sp9_F_contig10410.403.1 vs.
Match: Glucose-6-phosphate (isomerase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V0P9_9CHLO) HSP 1 Score: 59.7 bits (143), Expect = 7.270e-7 Identity = 30/75 (40.00%), Postives = 48/75 (64.00%), Query Frame = 1
Query: 412 AETAEWRRLVVHQKRIKNKHLKDVMALEDRSLALSAEFEGTILDYSRMNVSQLTMKLLLDLAKRQNLNKRVKVFF 636
A T EW L H K I++ HL+D++ E+R+ L E G +D+SR N++++TM+LLL+LA+R L ++ F
Sbjct: 436 AYTPEWNALREHTKEIESLHLRDLLLDEERTDNLIREHNGLYVDFSRQNITEVTMQLLLNLAERAKLRSKMNAMF 510
BLAST of mRNA_Ecto-sp9_F_contig10410.403.1 vs.
Match: Glucose-6-phosphate (isomerase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KDH7_9STRA) HSP 1 Score: 58.2 bits (139), Expect = 2.130e-6 Identity = 32/71 (45.07%), Postives = 45/71 (63.38%), Query Frame = 1
Query: 415 ETAEWRRLVVHQKRIKNK-HLKDVMALEDRSLALSAEFEGTILDYSRMNVSQLTMKLLLDLAKRQNLNKRV 624
ETA+W+RL H K IK HLK ++ E R+ AL+AEF G LD+SR N + T+ LL DLA + +++
Sbjct: 5 ETAQWQRLAAHAKTIKETTHLKTLLKDEARNSALTAEFNGINLDFSRQNATTETVDLLFDLADAAQVRQKI 75
BLAST of mRNA_Ecto-sp9_F_contig10410.403.1 vs.
Match: Glucose-6-phosphate (isomerase n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZJE0_CHLVA) HSP 1 Score: 58.2 bits (139), Expect = 2.220e-6 Identity = 29/75 (38.67%), Postives = 48/75 (64.00%), Query Frame = 1
Query: 412 AETAEWRRLVVHQKRIKNKHLKDVMALEDRSLALSAEFEGTILDYSRMNVSQLTMKLLLDLAKRQNLNKRVKVFF 636
A + EW L H K +++ HL+D++ E+R+ +L E G +D+SR NV++ TM+LLL+LA+R L ++ F
Sbjct: 73 AYSPEWMALREHTKEVESLHLRDLLVDEERTDSLVREHNGLYVDFSRQNVTETTMQLLLNLAERAKLRTKMNAMF 147
BLAST of mRNA_Ecto-sp9_F_contig10410.403.1 vs.
Match: Glucose-6-phosphate (isomerase, cytosolic n=59 Tax=Euphyllophyta TaxID=78536 RepID=G6PI_MAIZE) HSP 1 Score: 57.8 bits (138), Expect = 2.890e-6 Identity = 30/73 (41.10%), Postives = 44/73 (60.27%), Query Frame = 1
Query: 418 TAEWRRLVVHQKRIKNKHLKDVMALEDRSLALSAEFEGTILDYSRMNVSQLTMKLLLDLAKRQNLNKRVKVFF 636
T +W+ L H I+ HL+D+MA DR A++AE+EG LDYSR + TM+ LL LA L ++++ F
Sbjct: 10 TEQWKALQAHVGAIQKTHLRDLMADADRCKAMTAEYEGIFLDYSRQQATGETMEKLLKLADAAKLKEKIEKMF 82 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10410.403.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig10410.403.1 >prot_Ecto-sp9_F_contig10410.403.1 ID=prot_Ecto-sp9_F_contig10410.403.1|Name=mRNA_Ecto-sp9_F_contig10410.403.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=212bp MGFGHQRDGSNSLFGWGGSSSWGGWATTGGTEGGGGGGGGPDDRRMGWTNback to top mRNA from alignment at Ecto-sp9_F_contig10410:198..4012+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig10410.403.1 ID=mRNA_Ecto-sp9_F_contig10410.403.1|Name=mRNA_Ecto-sp9_F_contig10410.403.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=3815bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10410:198..4012+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig10410:198..4012+ >mRNA_Ecto-sp9_F_contig10410.403.1 ID=mRNA_Ecto-sp9_F_contig10410.403.1|Name=mRNA_Ecto-sp9_F_contig10410.403.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1272bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10410:198..4012+ (Ectocarpus species9 EcSCA_722f female)back to top |