mRNA_Ecto-sp9_F_contig104.389.1 (mRNA) Ectocarpus species9 EcSCA_722f female
|
Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig104.389.1 vs.
Match: Monooxygenase, (putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3L9_ECTSI) HSP 1 Score: 882 bits (2279), Expect = 9.690e-313 Identity = 457/473 (96.62%), Postives = 461/473 (97.46%), Query Frame = 1
Query: 874 AYTGMANGQGGGGAGATRVDAVVVGAGQAGLSVAYHLQRAGGLRVVTLDANQEAGGAWRHRWPSLELFSTRKWSSLPGYPMFANGACEDGYPSTGEMAMYMEEYESVMKLNVVRPVNVTGVSRTPMGTFLVETDCLLGGTVARWEARTVISAAGTHASPLWPRLPGWETFRGTQIHSSQYRFADDFRGKKVAVIGAGNSGAQILAEVSAPGVASSTLWSTLAAPSFLPMGLSGKEIFDTVARLRQKQGFVREEDIPSLHSIIMQPGVIEAAERGVYDQRVPKLARLTPTGVAWEASEDGSIPGGHADVDAIIWCTGYRSNTSHLSRLGLVRPNSTVGMDGREMGETEVPGVFAVGYGNWAGVGSGSIPGSTVYAKRAAAAAVHHLLGGNSYDSSRVAVEAASTGAFSPSPSSSLWRGXXXXXXXGSSGSGTRCWPSEGRASVHASAPAATLSGAPPPVFDGRVEEDKRVSVAA 2292
AYTGMANGQGGGGAGATRVDAVVVGAGQAGLSVAYHLQRAGGLRVVTLDANQEAGGAWRHRWPSLELFSTRKWSSLPGYPMFANGACEDGYPSTGEMAMYMEEYESVMKLNVVRPVNVTGVSRTPMGTFLVETDCLLGGTVARWEARTVISAAGTHASP+WPRLPGWETFRGTQIHSSQYRFADDFRGKKVAV+G+GNSGAQILAEVSAPGVASSTLWSTL APSFLPMGLSGKEIFDTVARLRQKQGFVREEDIPSLHSIIMQPGVIEAAERGVYDQRVPKLARLTPTGVAWEASEDGSIPGGHADVDAIIWCTGYRSNTSHLSRLGLVRPNSTVGMDGREMGETEVPGVFAVGYGNWAGVGSGSIPGSTVYAKRAAAAAVHHLLGGNSYDSSRVAVEAASTGAFSPSP LW GXXXXXXX G+RCWPSEGRASV ASAP ATLSGAPPPVFDGRVEEDKRVSVAA
Sbjct: 55 AYTGMANGQGGGGAGATRVDAVVVGAGQAGLSVAYHLQRAGGLRVVTLDANQEAGGAWRHRWPSLELFSTRKWSSLPGYPMFANGACEDGYPSTGEMAMYMEEYESVMKLNVVRPVNVTGVSRTPMGTFLVETDCLLGGTVARWEARTVISAAGTHASPVWPRLPGWETFRGTQIHSSQYRFADDFRGKKVAVVGSGNSGAQILAEVSAPGVASSTLWSTLTAPSFLPMGLSGKEIFDTVARLRQKQGFVREEDIPSLHSIIMQPGVIEAAERGVYDQRVPKLARLTPTGVAWEASEDGSIPGGHADVDAIIWCTGYRSNTSHLSRLGLVRPNSTVGMDGREMGETEVPGVFAVGYGNWAGVGSGSIPGSTVYAKRAAAAAVHHLLGGNSYDSSRVAVEAASTGAFSPSPXXXLWGGXXXXXXXXXXXXGSRCWPSEGRASVRASAPTATLSGAPPPVFDGRVEEDKRVSVAA 527
BLAST of mRNA_Ecto-sp9_F_contig104.389.1 vs.
Match: Predicted (flavoprotein CzcO associated with the cation diffusion facilitator CzcD n=2 Tax=Chitinophagaceae TaxID=563835 RepID=A0A1T5NLG5_9BACT) HSP 1 Score: 255 bits (652), Expect = 4.870e-73 Identity = 147/353 (41.64%), Postives = 210/353 (59.49%), Query Frame = 1
Query: 922 TRVDAVVVGAGQAGLSVAYHLQRAGGLRVVTLDANQEAGGAWRHRWPSLELFSTRKWSSLPGYPMFANGACEDGYPSTGEMAMYMEEYESVMKLNVVRPVNVTGVSRTPMGTFLVETDCLLGGTVARWEARTVISAAGTHASPLWPRLPGWETFRGTQIHSSQYRFADDFRGKKVAVIGAGNSGAQILAEVSAPGVASSTLWSTLAAPSFLPMGLSGKEIFDTVARLRQKQGFVREEDIPSLHSIIMQPGVIEAAERGVYDQRVPKLARLTPTGVAWEASEDGSIPGGHADVDAIIWCTGYRSNTSHLSRLGLVRPNSTVGMDGREMGETEVPGVFAVGYGNWAGVGSGSIPG 1980
T D +++G GQ+ LSVAY+L+R L+ + LDA GG+W++ W SL LFS +WSSLPG +F G + YPS E Y++EYE K V RPV VT V + TF++ T T + A+ ++SA G++A+P P +PG +F+GT +HSSQYR +DF GK+VA++G GNSGAQILAEVS +S LW T P FLP + GK +FD +L Q + R+ PSL I+M P V EA ERGVY +P P G+AW + + VDA+I+CTG+R +HL+ LG+++P+ + +G + T + G++ GYG+W G S ++ G
Sbjct: 7 TIYDVIIIGGGQSALSVAYYLRRTT-LKYIMLDAAPLPGGSWQYTWKSLSLFSPAQWSSLPG--VFMPGG-QHHYPSRAETITYLQEYELRYKFPVARPVKVTSVVKKE-DTFVLTT------TAGYYYAKAIVSATGSYANPFIPDIPGSASFKGTVLHSSQYREPEDFSGKRVAIVGEGNSGAQILAEVSK---VASALWITRQPPEFLPDDIDGKYLFDAATQLYQAKQQGRDYQPPSLGHIVMVPPVKEARERGVYQHFLPAFDHFYPDGIAWNTGQQEA-------VDAVIFCTGFRPALAHLAPLGIIQPDGRIKTNGTKA--TGITGLWLTGYGSWTGFASATLIG 336
BLAST of mRNA_Ecto-sp9_F_contig104.389.1 vs.
Match: ArsO (family NAD(P)H-dependent flavin-containing monooxygenase n=1 Tax=Deinococcus pimensis TaxID=309888 RepID=UPI000488E2E0) HSP 1 Score: 254 bits (648), Expect = 1.620e-72 Identity = 158/351 (45.01%), Postives = 197/351 (56.13%), Query Frame = 1
Query: 928 VDAVVVGAGQAGLSVAYHLQRAGGLRVVTLDANQEAGGAWRHRWPSLELFSTRKWSSLPGYPMFANGACEDGYPSTGEMAMYMEEYESVMKLNVVRPVNVTGVSRTPMGTFLVETDCLLGGTVARWEARTVISAAGTHASPLWPRLPGWETFRGTQIHSSQYRFADDFRGKKVAVIGAGNSGAQILAEVSAPGVASSTLWSTLAAPSFLPMGLSGKEIFDTVARLRQKQGFVREEDIPSLHSIIMQPGVIEAAERGVYDQRVPKLARLTPTGVAWEASEDGSIPGGHADVDAIIWCTGYRSNTSHLSRLGLVRPNSTVGMDGREMGETEVPGVFAVGYGNWAGVGSGSIPG 1980
+D VV+GAGQAGL+V L RA L V LDA GGAWRH W SL LFS KWSSLPG PM ED YP+ E+ Y+ YE L+V RPV V V R V TD W A V+SA GT +P+ P LPG E FRG Q+HSS+YR F GK+V V+G GNSGAQILAEVS AS W+TL P+FLP + G+ +FD R + + PSL +++M PGV EA ERGV R R+TP+GV W ++ + VDA+IWCTG+R SHL LG++ + V +DG P ++ VGYG W G S ++ G
Sbjct: 4 LDVVVIGAGQAGLAVGRELARAD-LGSVVLDAQDGPGGAWRHGWDSLRLFSPAKWSSLPGVPMPGG---EDTYPARDEVIAYLAAYEERYGLDVRRPVRVEAVERDGEA-LRVTTDR------GAWRAGAVVSATGTWDAPIVPDLPGRENFRGVQLHSSRYRSPGAFAGKRVVVVGGGNSGAQILAEVSMVAHAS---WATLTPPAFLPDDVDGRALFDVATRRYRAEQAGEAFRAPSLGNVVMVPGVREARERGVLRARA-MFTRMTPSGVVWPDGQEEA-------VDAVIWCTGFRPALSHLRPLGVLDTDGRVRVDGTR--SVLEPRLWLVGYGQWTGFASATLIG 330
BLAST of mRNA_Ecto-sp9_F_contig104.389.1 vs.
Match: Cation (diffusion facilitator CzcD-associated flavoprotein CzcO n=2 Tax=Deinococcus humi TaxID=662880 RepID=A0A7W8NG02_9DEIO) HSP 1 Score: 252 bits (644), Expect = 7.740e-72 Identity = 154/350 (44.00%), Postives = 199/350 (56.86%), Query Frame = 1
Query: 931 DAVVVGAGQAGLSVAYHLQRAGGLRVVTLDANQEAGGAWRHRWPSLELFSTRKWSSLPGYPMFANGACEDGYPSTGEMAMYMEEYESVMKLNVVRPVNVTGVSRTPMGTFLVETDCLLGGTVARWEARTVISAAGTHASPLWPRLPGWETFRGTQIHSSQYRFADDFRGKKVAVIGAGNSGAQILAEVSAPGVASSTLWSTLAAPSFLPMGLSGKEIFDTVARLRQKQGFVREEDIPSLHSIIMQPGVIEAAERGVYDQRVPKLARLTPTGVAWEASEDGSIPGGHADVDAIIWCTGYRSNTSHLSRLGLVRPNSTVGMDGREMGETEVPGVFAVGYGNWAGVGSGSIPG 1980
D +V+GAGQAGL+VA L R G L V LDA + G AWRH W SL LFS +WSSLPG+ M E+ YP E+ Y+ EYE LN++RPV V V R G F VET+ A ++AR V+SA GT +P+ P + G FRG Q+HS+ YR F G++V V+G GNSGAQILAEVS + T W+TL P+FLP + G+ +FD + + Q PSL I+M PGV EA ERG+ R R+T +GV W +D DVDA+IWCTG+R HL+ LG+V P V + G G++ VGYGNW G S ++ G
Sbjct: 12 DVLVIGAGQAGLAVARELSRTG-LSYVVLDAQEGVGAAWRHAWDSLRLFSPARWSSLPGFLMPGG---EEEYPRRSEVMAYLAEYERRYGLNILRPVRVQAVIRNGEG-FRVETNR------ASFQARFVVSATGTWDAPVIPDVAGRAEFRGLQVHSAFYRRPQAFAGQRVVVVGGGNSGAQILAEVSK---VADTTWATLRPPTFLPDDVDGRVLFDVATQRYRAQQAGVAFSAPSLGDIVMVPGVREARERGILHARA-MFTRMTGSGVVWPDGQD-------QDVDAVIWCTGFRPALEHLAPLGVVGPEGRVQVQGTH--SVRESGLWLVGYGNWTGFASATLIG 337
BLAST of mRNA_Ecto-sp9_F_contig104.389.1 vs.
Match: ArsO (family NAD(P)H-dependent flavin-containing monooxygenase n=1 Tax=Kocuria dechangensis TaxID=1176249 RepID=UPI00166DEBA0) HSP 1 Score: 249 bits (635), Expect = 1.050e-70 Identity = 155/369 (42.01%), Postives = 205/369 (55.56%), Query Frame = 1
Query: 928 VDAVVVGAGQAGLSVAYHLQRAGGLRVVTLDANQEAGGAWRHRWPSLELFSTRKWSSLPGYPMFANGACEDGYPSTGEMAMYMEEYESVMKLNVVRPVNVTGVSRTPMGTFLVETDCLLGGTVARWEARTVISAAGTHASPLWPRLPGWETFRGTQIHSSQYRFADDFRGKKVAVIGAGNSGAQILAEVSAPGVASSTLWSTLAAPSFLPMGLSGKEIFDTVARLRQK--QGFVREEDIPSLHSIIMQPGVIEAAERGVYDQRVPKLARLTPTGVAWEASEDGSIPGGHADVDAIIWCTGYRSNTSHLSRLGLVRPNSTVGMDGREMGETEVPGVFAVGYGNWAGVGSGSIPGSTVYAKRAAAAAVHHL 2028
VD VVGAGQAGL+ Y+L+R G L V LD + AGGAWRH WPSL LFS ++SSLPG PM + G P ++ Y+ +YE+ L V RPV V V R G F +ET T +W AR V+SA GT + P WP +PG FRG Q+HS++Y D +RG++V V+G NSGAQI AE++ G A T W AP +LP + G+E+F Q G + SL +I++ P V A + G+ + P AR TPTG+AW G +VDA+IWCTG+R HL L + + TV G T+VPG++ +GYG+W G GS ++ G AK AA HL
Sbjct: 5 VDVAVVGAGQAGLAAGYYLRRTG-LSFVLLDDQETAGGAWRHTWPSLRLFSPAEYSSLPGRPMPSTAG---GNPGAAQVIDYLADYEARYDLPVRRPVRVRAVHREGDG-FRLET------TAGQWHARAVVSATGTWSQPFWPTVPGQRDFRGAQVHSARYGGPDPYRGRRVVVVGGANSGAQIAAELA--GSADLT-WCLNGAPHWLPDDVDGRELFRVATARAQALAAGLPDPGGVASLGNIVVVPPVKRARDAGLL-RPAPMFARFTPTGIAW-------ADGREQEVDAVIWCTGFRPALRHLRPLHVREDDGTVSTRGTA--STKVPGLYLLGYGDWTGPGSATLIGVGPTAKETVAALTAHL 349
BLAST of mRNA_Ecto-sp9_F_contig104.389.1 vs.
Match: Monooxygenase (n=1 Tax=Skermanella aerolata TaxID=393310 RepID=A0A512DYN6_9PROT) HSP 1 Score: 249 bits (635), Expect = 2.070e-70 Identity = 161/353 (45.61%), Postives = 199/353 (56.37%), Query Frame = 1
Query: 931 DAVVVGAGQAGLSVAYHLQRAGGLRVVTLDANQEAGGAWRHRWPSLELFSTRKWSSLPGYPMFANGACEDGYPSTGEMAMYMEEYESVMKLNVVRPVNVTGVSRTPMGTFLVETDCLLGGTVARWEARTVISAAGTHASPLWPRLPGWETFRGTQIHSSQYRFADDFRGKKVAVIGAGNSGAQILAEVSAPGVASSTLWSTLAAPSFLPMGLSGKEIFD-TVARLRQKQGFVREEDIPS--LHSIIMQPGVIEAAERGVYDQRVPKLARLTPTGVAWEASEDGSIPGGHADVDAIIWCTGYRSNTSHLSRLGLVRPNSTVGMDGREMGETEVPGVFAVGYGNWAGVGSGSIPG 1980
D VV+G GQAGL+V YHL+R G L V LDA GGAWRH W SL FS WSSLPG+PM A G E YP E+ Y+ YE+ L V RPV+V V G V TD W AR V+SA GT P PG + F G QIHS+ Y + F G++V ++G GNSGAQILAEVS ++T W T P FLP + G+ +F ARL+ Q RE DIP+ L I+M P V+EA ERGV + V AR T TGV W DG+ G VDA+IWCTG+R H++ LG+V P+ TV +DG PG++ VGYG W G S ++ G
Sbjct: 6 DVVVIGGGQAGLAVGYHLRRTG-LSFVILDAGTSPGGAWRHTWQSLRPFSPAPWSSLPGWPM-AGG--ETTYPGRDEVLDYLARYETRYDLPVRRPVSVRSVEHAGNGHLRVVTDR------GDWTARMVVSATGTWRRTHIPDYPGRDVFGGVQIHSAAYETPEPFAGRRVLIVGGGNSGAQILAEVSKT---AATTWVTEKPPVFLPDDVDGRVLFHRATARLKALQEG-REPDIPAGGLGDIVMVPPVVEARERGVL-RSVRPFARFTETGVVWR---DGTETG----VDAVIWCTGFRPALDHVTELGIVGPDGTVELDGTR--SIREPGLWFVGYGGWTGPASATLIG 334
BLAST of mRNA_Ecto-sp9_F_contig104.389.1 vs.
Match: Putative (oxidoreductase CzcO n=15 Tax=Pseudomonas TaxID=286 RepID=A0A5E7Q2W1_PSEFL) HSP 1 Score: 246 bits (628), Expect = 1.230e-69 Identity = 153/356 (42.98%), Postives = 196/356 (55.06%), Query Frame = 1
Query: 925 RVDAVVVGAGQAGLSVAYHLQRAGGLRVVTLDANQEAGGAWRHRWPSLELFSTRKWSSLPGYPMFANGACEDGYPSTGEMAMYMEEYESVMKLNVVRPVNVTGVSRTPMGTFLVETDCLLGGTVARWEARTVISAAGTHASPLWPRLPGWETFRGTQIHSSQYRFADDFRGKKVAVIGAGNSGAQILAEVSAPGVASSTLWSTLAAPSFLPMGLSGKEIFDTVARL--RQKQGFVREEDIPSLHSIIMQPGVIEAAERGVYDQRVPKLARLTPTGVAWEASEDGSIPGGHADVDAIIWCTGYRSNTSHLSRLGLVRPNSTVGMDGREMGETEVPGVFAVGYGNWAGVGSGSIPGST 1986
++D V++G GQ+ L+VAY L+R L V LDA +E GGAWRH W SL LFS WSS+PG+ M +DGYPS + Y+ +YE V RPV VT V RT G + D L W+A+ V+SA GT ++P P P E F G Q+HS+ Y A F GKKV V+G GNSGAQILAEVS + T W T P FLP + G+ +F+ Q +G V E+ + L I+M P V+EA ER V + V T GV W DGS + VDA+IWCTG+RS HL LGLV V ++G TE P ++ VGYG W G S ++ G T
Sbjct: 8 QLDVVIIGGGQSALAVAYFLRRTP-LSFVILDAEEEPGGAWRHGWNSLRLFSPATWSSIPGWMM---PPTQDGYPSRNHVIEYLNQYEQRYHFPVERPVRVTSVERTESGLRVRSEDKL-------WDAKVVVSATGTWSNPYVPHYPNAELFAGRQLHSANYVEAQPFAGKKVLVVGCGNSGAQILAEVSK---VAETTWVTPVEPMFLPDDVDGRVLFERATERWKAQLEGRVIEQPVGGLGDIVMVPPVVEARERNVL-KSVRPFESFTRNGVIWG---DGS----ESAVDAVIWCTGFRSAVQHLESLGLVNAEGRVEVEGTH--STEEPRLWLVGYGEWTGSASATLIGVT 339
BLAST of mRNA_Ecto-sp9_F_contig104.389.1 vs.
Match: ArsO (family NAD(P)H-dependent flavin-containing monooxygenase n=1 Tax=Arenibaculum pallidiluteum TaxID=2812559 RepID=UPI001A969102) HSP 1 Score: 246 bits (627), Expect = 1.690e-69 Identity = 156/363 (42.98%), Postives = 203/363 (55.92%), Query Frame = 1
Query: 928 VDAVVVGAGQAGLSVAYHLQRAGGLRVVTLDANQEAGGAWRHRWPSLELFSTRKWSSLPGYPMFANGACEDGYPSTGEMAMYMEEYESVMKLNVVRPVNVTGVSRTPMGTFLVETDCLLGGTVARWEARTVISAAGTHASPLWPRLPGWETFRGTQIHSSQYRFADDFRGKKVAVIGAGNSGAQILAEVSAPGVASSTLWSTLAAPSFLPMGLSGKEIFD-TVARLRQKQGFVREEDIPS-LHSIIMQPGVIEAAERGVYDQRVPKLARLTPTGVAWEASEDGSIPGGHADVDAIIWCTGYRSNTSHLSRLGLVRPNSTVGMDGREMGETEVPGVFAVGYGNWAGVGSGSIPGSTVYAKRAAA 2010
VD VV+G GQ+GL+V YHL+RAG L + LDA GGAWRH W SL LFS WSSLPG+ + NG E YP ++ Y+ YE+ +L V RPV V V + V TD W AR V+SA GT PL P PG ETFRG QIHS+ Y+ + F G++V ++G GNSGAQILAEVS ++T W TL P FLP + G+ +F AR++ Q + IP I+M P V+EA RGV + V AR T TGV W G ++ DA+IWCTG+R H++ LGL+R + T+ +DG P ++ VGYG W G S ++ G A+ AA
Sbjct: 5 VDVVVIGGGQSGLAVGYHLRRAG-LSFIILDAEAAPGGAWRHAWRSLRLFSPATWSSLPGWLL--NGG-ETTYPGRDDILGYLSRYEARYELPVRRPVTVRSVGTSEDDLVRVVTDA------GDWTARMVVSATGTWRHPLIPDYPGLETFRGVQIHSANYQAPEPFAGQRVLIVGGGNSGAQILAEVSK---VAATTWVTLRPPVFLPDEVDGRVLFHRATARIKALQEGRDPDAIPGGFGDIVMVPPVVEARSRGVL-RSVGPPARFTETGVIWR-------DGASSEFDAVIWCTGFRPALDHVAGLGLIREDGTIEVDGTR--SIREPRLWFVGYGGWTGPASATLIGVGRSARETAA 344
BLAST of mRNA_Ecto-sp9_F_contig104.389.1 vs.
Match: Pyridine (nucleotide-disulfide oxidoreductase n=1 Tax=Phenylobacterium sp. SCN 70-31 TaxID=1660129 RepID=A0A1E4GUP9_9CAUL) HSP 1 Score: 245 bits (626), Expect = 2.200e-69 Identity = 149/355 (41.97%), Postives = 201/355 (56.62%), Query Frame = 1
Query: 922 TRVDAVVVGAGQAGLSVAYHLQRAGGLRVVTLDANQEAGGAWRHRWPSLELFSTRKWSSLPGYPMFANGACEDGYPSTGEMAMYMEEYESVMKLNVVRPVNVTGVSRTPMGTFLVETDCLLGGTVARWEARTVISAAGTHASPLWPRLPGWETFRGTQIHSSQYRFADDFRGKKVAVIGAGNSGAQILAEVSAPGVASSTLWSTLAAPSFLPMGLSGKEIFD-TVARLRQKQGFVREEDIPS-LHSIIMQPGVIEAAERGVYDQRVPKLARLTPTGVAWEASEDGSIPGGHADVDAIIWCTGYRSNTSHLSRLGLVRPNSTVGMDGREMGETEVPGVFAVGYGNWAGVGSGSIPG 1980
T D +V+G GQAGL++ Y L+R G LR +D + GGAWRH W SL LFS +WSSLPG+PM ++G + YP+ E+ Y+ YE+ +L V+RP V V G +VET C A W R V+SA GT +P WP P F G QIHS+QYR + F+G++V V+G GNSGAQI AEVS VA +T W T P+FLP + G+ +F+ AR + KQG + P L ++M P V A +RGV + V R TP GV W G +VDA+IWCTG+R HL+ L +V P+ V ++G + P ++ VGYG W G S ++ G
Sbjct: 7 TSFDVIVIGGGQAGLAIGYFLRRTG-LRFAIVDGEPDPGGAWRHGWDSLRLFSPAEWSSLPGWPMPSSG---EAYPTRDEVIAYLTAYEARYELPVIRPAEVDLV-HAEAGALVVET-C-----PATWRTRAVVSATGTWRAPYWPPYPDQPRFEGVQIHSAQYRNPEVFKGQRVLVVGGGNSGAQIFAEVSQ--VADAT-WVTPEPPTFLPDDVDGRVLFERATARWQAKQGIGADAPPPGGLGDVVMVPPVRAARDRGVL-KAVRPFGRFTPRGVVWP-------DGRETEVDAVIWCTGFRPALQHLADLNVVEPSGRVAVEGTR--SVKEPRLWLVGYGEWTGFASATLTG 337
BLAST of mRNA_Ecto-sp9_F_contig104.389.1 vs.
Match: Pyridine (nucleotide-disulfide oxidoreductase n=1 Tax=Phenylobacterium sp. SCN 69-14 TaxID=1660128 RepID=A0A1D2TWZ2_9CAUL) HSP 1 Score: 244 bits (624), Expect = 4.060e-69 Identity = 149/355 (41.97%), Postives = 200/355 (56.34%), Query Frame = 1
Query: 922 TRVDAVVVGAGQAGLSVAYHLQRAGGLRVVTLDANQEAGGAWRHRWPSLELFSTRKWSSLPGYPMFANGACEDGYPSTGEMAMYMEEYESVMKLNVVRPVNVTGVSRTPMGTFLVETDCLLGGTVARWEARTVISAAGTHASPLWPRLPGWETFRGTQIHSSQYRFADDFRGKKVAVIGAGNSGAQILAEVSAPGVASSTLWSTLAAPSFLPMGLSGKEIFD-TVARLRQKQGFVREEDIPS-LHSIIMQPGVIEAAERGVYDQRVPKLARLTPTGVAWEASEDGSIPGGHADVDAIIWCTGYRSNTSHLSRLGLVRPNSTVGMDGREMGETEVPGVFAVGYGNWAGVGSGSIPG 1980
T D +V+G GQAGL++ Y L+R G LR +D E GGAWRH W SL LFS +WSSLPG+PM ++G + YP+ E+ Y+ YE L V+RP V V R +VET C A W ARTV+SA GT +P WP P + G QIHS+QY+ + F+GK+V V+G GNSGAQILAEVS + T+W T P FLP + G+ +F+ AR + +QG + P L I+M P V A +RGV + V R GV W G +VDA+IWCTG+R+ HL+ LG+V P+ V ++G + P ++ VGYG W G S ++ G
Sbjct: 6 TSFDVLVMGGGQAGLAIGYFLRRTG-LRFAIVDGEPEPGGAWRHGWDSLRLFSPAQWSSLPGWPMLSSG---EAYPARDEVIAYLAAYEGRYDLPVIRPAEVDLV-RAEKEALVVET-C-----AATWRARTVVSATGTWRAPNWPAYPEQARYEGLQIHSAQYQNPEAFKGKRVLVVGGGNSGAQILAEVSQ---VAETIWVTPEPPIFLPDDVDGRVLFERATARWQAQQGIAVDAPPPGGLGDIVMVPPVKAARQRGVL-KAVRPFDRFKARGVVWP-------DGRETEVDAVIWCTGFRAALRHLAGLGVVEPSGRVAVEGTR--SVKEPRLWLVGYGEWTGFASATLTG 336 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig104.389.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig104.389.1 >prot_Ecto-sp9_F_contig104.389.1 ID=prot_Ecto-sp9_F_contig104.389.1|Name=mRNA_Ecto-sp9_F_contig104.389.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=637bp MSGALNRQLNTLAVRSKTAVSAAAAASAASAKHHGRTPSSTARNPSSRVAback to top mRNA from alignment at Ecto-sp9_F_contig104:30069..38078+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig104.389.1 ID=mRNA_Ecto-sp9_F_contig104.389.1|Name=mRNA_Ecto-sp9_F_contig104.389.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=8010bp|location=Sequence derived from alignment at Ecto-sp9_F_contig104:30069..38078+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig104:30069..38078+ >mRNA_Ecto-sp9_F_contig104.389.1 ID=mRNA_Ecto-sp9_F_contig104.389.1|Name=mRNA_Ecto-sp9_F_contig104.389.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=3822bp|location=Sequence derived from alignment at Ecto-sp9_F_contig104:30069..38078+ (Ectocarpus species9 EcSCA_722f female)back to top |