mRNA_Ecto-sp9_F_contig10399.385.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig10399.385.1 vs.
Match: Non-specific (serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYJ6_ECTSI) HSP 1 Score: 263 bits (672), Expect = 7.270e-79 Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 1
Query: 7 EACLVLEAVVATQKGRLDEALTLIEEARQALAPGLAALLSESYTRSYKRMLTIMSLAELEEVVEYKRVVKDARSLGTPPVKGEGMEGSERSRRWSEVAEHRSNLRAKWTARLQWVPEDVDVWRGILAVRSLVLKPRE 417
EACLVLEAVVATQKGRLDEALTLIEEARQALAPGLAALLSESYTRSYKRMLTIMSLAELEEVVEYKRVVKDARSLGTPPVKGEGMEGSERSRRWSEVAEHRSNLRAKWTARLQWVPEDVDVWRGILAVRSLVLKPRE
Sbjct: 614 EACLVLEAVVATQKGRLDEALTLIEEARQALAPGLAALLSESYTRSYKRMLTIMSLAELEEVVEYKRVVKDARSLGTPPVKGEGMEGSERSRRWSEVAEHRSNLRAKWTARLQWVPEDVDVWRGILAVRSLVLKPRE 750
BLAST of mRNA_Ecto-sp9_F_contig10399.385.1 vs.
Match: Non-specific (serine/threonine protein kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2T8_9PHAE) HSP 1 Score: 255 bits (651), Expect = 4.860e-76 Identity = 131/137 (95.62%), Postives = 135/137 (98.54%), Query Frame = 1
Query: 7 EACLVLEAVVATQKGRLDEALTLIEEARQALAPGLAALLSESYTRSYKRMLTIMSLAELEEVVEYKRVVKDARSLGTPPVKGEGMEGSERSRRWSEVAEHRSNLRAKWTARLQWVPEDVDVWRGILAVRSLVLKPRE 417
EACLVLEAVVATQKGRLDEALTLIEEARQALAPGLA LLSESYTR+YKRMLTIMSLAELEEVVEYKRV+KDARSLG PPV+G+GMEGSERSRRWSEVAEHRSNLRAKWTARLQWVPEDVDVWRGILAVRSLVLKPRE
Sbjct: 410 EACLVLEAVVATQKGRLDEALTLIEEARQALAPGLATLLSESYTRAYKRMLTIMSLAELEEVVEYKRVLKDARSLGAPPVRGQGMEGSERSRRWSEVAEHRSNLRAKWTARLQWVPEDVDVWRGILAVRSLVLKPRE 546
BLAST of mRNA_Ecto-sp9_F_contig10399.385.1 vs.
Match: DUF3385 (domain-containing protein (Fragment) n=1 Tax=Myxococcaceae bacterium TaxID=2484252 RepID=A0A4Q5Y6Q2_9DELT) HSP 1 Score: 91.3 bits (225), Expect = 1.130e-18 Identity = 58/146 (39.73%), Postives = 85/146 (58.22%), Query Frame = 1
Query: 28 AVVATQKGRLDEALTLIEEARQALAPGLAALLSESYTRSYKRMLTIMSLAELEEVVEYKRVVKDARSLGTPPVKGEGMEGSERSRRWS----------------EVAEHRSNLRAKWTARLQWVPEDVDVWRGILAVRSLVLKPRE 417
AV+A ++A++LI E R + L ALLSESY+R+Y+ M+T LAE+EEVVEY++ V A + V+ +E S SRR S ++ + +L KW ARL+W P+D+DV+R ILAV +LV +P+E
Sbjct: 1596 AVLAIHNQEYNKAISLINEVRAMASGSLGALLSESYSRAYRAMVTTQVLAEMEEVVEYRQSVARA-NYDNEKVRNSEIEFSADSRRLSGRGIALRDDASIGGQVDLDAKKVSLINKWRARLKWAPKDIDVYRQILAVHTLVAEPKE 1740
BLAST of mRNA_Ecto-sp9_F_contig10399.385.1 vs.
Match: Non-specific (serine/threonine protein kinase n=1 Tax=Eucalyptus grandis TaxID=71139 RepID=A0A059CX05_EUCGR) HSP 1 Score: 87.8 bits (216), Expect = 1.790e-17 Identity = 53/130 (40.77%), Postives = 74/130 (56.92%), Query Frame = 1
Query: 28 AVVATQKGRLDEALTLIEEARQALAPGLAALLSESYTRSYKRMLTIMSLAELEEVVEYKRVVKDARSLGTPPVKGEGMEGSERSRRWSEVAEHRSNLRAKWTARLQWVPEDVDVWRGILAVRSLVLKPRE 417
AV++ ++G+ DEA +E AR+ LA LAAL+ ESY R+Y M+ + L ELEEV+EY T PV EG R+ +R WT R++ V +V+VW+G+LAVR+LVL P E
Sbjct: 337 AVISVRRGKYDEAREYVERARKCLATELAALVLESYDRAYSHMIRVQQLLELEEVIEYC----------TLPVGNSVAEG------------RRALIRNMWTERIKGVKRNVEVWQGLLAVRTLVLPPTE 444
BLAST of mRNA_Ecto-sp9_F_contig10399.385.1 vs.
Match: serine/threonine-protein (kinase TOR isoform X2 n=2 Tax=Eucalyptus grandis TaxID=71139 RepID=UPI00192EB4E0) HSP 1 Score: 87.8 bits (216), Expect = 1.820e-17 Identity = 53/130 (40.77%), Postives = 74/130 (56.92%), Query Frame = 1
Query: 28 AVVATQKGRLDEALTLIEEARQALAPGLAALLSESYTRSYKRMLTIMSLAELEEVVEYKRVVKDARSLGTPPVKGEGMEGSERSRRWSEVAEHRSNLRAKWTARLQWVPEDVDVWRGILAVRSLVLKPRE 417
AV++ ++G+ DEA +E AR+ LA LAAL+ ESY R+Y M+ + L ELEEV+EY T PV EG R+ +R WT R++ V +V+VW+G+LAVR+LVL P E
Sbjct: 887 AVISVRRGKYDEAREYVERARKCLATELAALVLESYDRAYSHMIRVQQLLELEEVIEYC----------TLPVGNSVAEG------------RRALIRNMWTERIKGVKRNVEVWQGLLAVRTLVLPPTE 994
BLAST of mRNA_Ecto-sp9_F_contig10399.385.1 vs.
Match: serine/threonine-protein (kinase TOR isoform X1 n=1 Tax=Eucalyptus grandis TaxID=71139 RepID=UPI00192E9AF0) HSP 1 Score: 87.8 bits (216), Expect = 1.840e-17 Identity = 53/130 (40.77%), Postives = 74/130 (56.92%), Query Frame = 1
Query: 28 AVVATQKGRLDEALTLIEEARQALAPGLAALLSESYTRSYKRMLTIMSLAELEEVVEYKRVVKDARSLGTPPVKGEGMEGSERSRRWSEVAEHRSNLRAKWTARLQWVPEDVDVWRGILAVRSLVLKPRE 417
AV++ ++G+ DEA +E AR+ LA LAAL+ ESY R+Y M+ + L ELEEV+EY T PV EG R+ +R WT R++ V +V+VW+G+LAVR+LVL P E
Sbjct: 1426 AVISVRRGKYDEAREYVERARKCLATELAALVLESYDRAYSHMIRVQQLLELEEVIEYC----------TLPVGNSVAEG------------RRALIRNMWTERIKGVKRNVEVWQGLLAVRTLVLPPTE 1533
BLAST of mRNA_Ecto-sp9_F_contig10399.385.1 vs.
Match: Serine/threonine-protein (kinase TOR (Fragment) n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N507_MICPC) HSP 1 Score: 86.7 bits (213), Expect = 4.670e-17 Identity = 54/126 (42.86%), Postives = 73/126 (57.94%), Query Frame = 1
Query: 28 AVVATQKGRLDEALTLIEEARQALAPGLAALLSESYTRSYKRMLTIMSLAELEEVVEYKRVVKDARSLGTPPVKGEGMEGSERSRRWSEVAEHRSNLRAKWTARLQWVPEDVDVWRGILAVRSLVL 405
AV+A +G +EA I AR AL LAAL++ESY RSY M+ + L ELEEV+EY + K A + G G S+ S ++VA R +R W R+ V +V+VW+ +LAVRSLVL
Sbjct: 1453 AVLAVHRGETEEARAHIAAARDALGAELAALVTESYDRSYGGMIRVQQLTELEEVIEYAELGKIAAANARGS--GAGRSPSDPSMSDADVAVRRDLMRKMWRERIYGVQRNVEVWQALLAVRSLVL 1576
BLAST of mRNA_Ecto-sp9_F_contig10399.385.1 vs.
Match: Serine/threonine-protein (kinase TOR (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0IHJ1_MICPS) HSP 1 Score: 85.5 bits (210), Expect = 1.160e-16 Identity = 56/144 (38.89%), Postives = 74/144 (51.39%), Query Frame = 1
Query: 28 AVVATQKGRLDEALTLIEEARQALAPGLAALLSESYTRSYKRMLTIMSLAELEEVVEYKRV--------------VKDARSLGTPPVKGEGMEGSERSRRWSEVAEHRSNLRAKWTARLQWVPEDVDVWRGILAVRSLVLKPRE 417
A++A +G +DEA I AR AL LAAL++ESY RSY M+ + L ELEEV+EY + + R +G G G G + SR VA R +R W R+ V V+VW+ +LAVRSLVL E
Sbjct: 1387 AILAVHRGDVDEAREHIASARDALGAELAALVTESYDRSYGGMIRVQQLTELEEVIEYTELGRVLETYGAGGSHATRAGRFVGVGSTPGGGAGGVDASR----VASRRETIRRMWRDRVYGVQRKVEVWQALLAVRSLVLPATE 1526
BLAST of mRNA_Ecto-sp9_F_contig10399.385.1 vs.
Match: Non-specific (serine/threonine protein kinase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WQY9_GLOUD) HSP 1 Score: 81.6 bits (200), Expect = 2.640e-15 Identity = 45/130 (34.62%), Postives = 71/130 (54.62%), Query Frame = 1
Query: 28 AVVATQKGRLDEALTLIEEARQALAPGLAALLSESYTRSYKRMLTIMSLAELEEVVEYKRVVKDARSLGTPPVKGEGMEGSERSRRWSEVAEHRSNLRAKWTARLQWVPEDVDVWRGILAVRSLVLKPRE 417
+V+A G+ DEA LI+E R+ L L AL+ ESY+R+Y+ +T+ L+ELEE++ YK++ + E A ++ ++ W ARL V+VW+ ILAVRSL++ PR+
Sbjct: 1980 SVLAVHHGKFDEAANLIDETRKTLDTKLGALVGESYSRAYRSTITLQQLSELEEIITYKKLRMNVAKS-------------------EEAARYKRHMVRMWHARLSGCKRVVEVWQQILAVRSLIITPRD 2090
BLAST of mRNA_Ecto-sp9_F_contig10399.385.1 vs.
Match: Non-specific (serine/threonine protein kinase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YAB1_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 2.650e-15 Identity = 46/130 (35.38%), Postives = 72/130 (55.38%), Query Frame = 1
Query: 28 AVVATQKGRLDEALTLIEEARQALAPGLAALLSESYTRSYKRMLTIMSLAELEEVVEYKRVVKDARSLGTPPVKGEGMEGSERSRRWSEVAEHRSNLRAKWTARLQWVPEDVDVWRGILAVRSLVLKPRE 417
+V+A GR DEA LI+E R+ L L AL+ ESY+R+Y+ ++T+ L+ELEEV+ YK++ + + A ++ ++ W RL + V+VW+ ILAVR+LVL PR+
Sbjct: 2005 SVLAVHHGRFDEAAVLIDETRRTLDTKLGALVGESYSRAYRSVVTLQQLSELEEVITYKKLRLHVATS-------------------EDAARYKRHMVRMWQTRLGGCKQSVEVWQQILAVRALVLAPRD 2115 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10399.385.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig10399.385.1 >prot_Ecto-sp9_F_contig10399.385.1 ID=prot_Ecto-sp9_F_contig10399.385.1|Name=mRNA_Ecto-sp9_F_contig10399.385.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=139bp VEEACLVLEAVVATQKGRLDEALTLIEEARQALAPGLAALLSESYTRSYKback to top mRNA from alignment at Ecto-sp9_F_contig10399:2791..4504+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig10399.385.1 ID=mRNA_Ecto-sp9_F_contig10399.385.1|Name=mRNA_Ecto-sp9_F_contig10399.385.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=1714bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10399:2791..4504+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig10399:2791..4504+ >mRNA_Ecto-sp9_F_contig10399.385.1 ID=mRNA_Ecto-sp9_F_contig10399.385.1|Name=mRNA_Ecto-sp9_F_contig10399.385.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=834bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10399:2791..4504+ (Ectocarpus species9 EcSCA_722f female)back to top |