mRNA_Ecto-sp9_F_contig10375.364.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig10375.364.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMS2_ECTSI) HSP 1 Score: 641 bits (1654), Expect = 3.580e-229 Identity = 330/345 (95.65%), Postives = 336/345 (97.39%), Query Frame = 1
Query: 4 STPLPDR------QAIGTLDKANADVEALERLASFLGTLFVKNKITETDEKVLAAAAKRRPKLKDVGSVRAGCSAGQVLSLAGGDKASADTQELALKLLSGETLDEEEAYRLGKRIFDVQQPSTVLCLCVQILRVRYESPSEWRGLIKAQQETLRVERFNPQVVSDAYQRGKKAGNNPRLVVQLAEPFDGMDRGELLTPLLAQHLQNKFNVVAVSQCGRSSGPKYGQNLLDIATGMTSLSTPFVHSNSDIERDVEVGNGGIDPPEFGWYVDQQEISLELDAWVDLRRNIIKRPFLATSEKFINTCGASVLVASAFHPSYAEKMMTCAETATDLKGCMVVRKGLEG 1020
S P+P+ QAIG+LDKANADVEALERLASFLGTLFVKNKITETDEKVLAAAAKRRPKLKDVGSVRAGCSAGQVLSLAGGDKASADTQELALKLLSGETLDEEEAYRLGKRIFDVQQPSTVLCLCVQILRVRYESPSEWRGLIKAQQETLRVERFNPQVVSDAYQRGK++GNNPRLVVQLAEPFDGMDRGELLTPLLAQHLQ+KFNVVAVSQCGRSSGPKYGQNLLDIATGMTSLSTPFVHSNSDIERDVEVGNGGIDPPEFGWYVDQQEISLELDAWVDLRRNIIKRPFLATSEKFINTCGASVLVASAFHPSYAEKMMTCAETATD KGCMVVRKGLEG
Sbjct: 69 SKPIPEDLVSPLIQAIGSLDKANADVEALERLASFLGTLFVKNKITETDEKVLAAAAKRRPKLKDVGSVRAGCSAGQVLSLAGGDKASADTQELALKLLSGETLDEEEAYRLGKRIFDVQQPSTVLCLCVQILRVRYESPSEWRGLIKAQQETLRVERFNPQVVSDAYQRGKESGNNPRLVVQLAEPFDGMDRGELLTPLLAQHLQSKFNVVAVSQCGRSSGPKYGQNLLDIATGMTSLSTPFVHSNSDIERDVEVGNGGIDPPEFGWYVDQQEISLELDAWVDLRRNIIKRPFLATSEKFINTCGASVLVASAFHPSYAEKMMTCAETATDFKGCMVVRKGLEG 413
BLAST of mRNA_Ecto-sp9_F_contig10375.364.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNK2_9STRA) HSP 1 Score: 288 bits (736), Expect = 9.450e-91 Identity = 170/349 (48.71%), Postives = 227/349 (65.04%), Query Frame = 1
Query: 4 STPLPDR------QAIGTLDKAN-ADVE-ALERLASFLGTLFVKNKITETDEKVLAAAAKRRPKLKDVGSVRAGCSAGQVLSLAGGD-KASADTQELALKLLSGETLDEEEAYRLGKRIFDVQQPSTVLCLCVQILRVRYESPSEWRGLIKAQQETLRVERFNPQVVS-DAYQRGKKAGNNPRLVVQLAEPFDGMDRGELLTPLLAQHLQNKFNVVAVSQCGRSSGPKYGQNLLDIATGMTSLSTPFVHSNSDIERDVEVGNGGIDPPEFGWYVDQQEISLELDAWVDLRRNIIKRPFLATSEKFINTCGASVLVASAFHPSYAEKMMTCAETATDLKGCMVVRKGLEG 1020
S P+PD A+ TLD A+ A++E A +RLASFLGTLFVK+ I E+D VL A AKRR +L G R GCS+ Q+LS+A GD ASA+ L LL GE L EA LG+R++D +P+ L +LRVRYE+ E+ GL++AQ T+ E Q S + + R +VQLAEPFDG+DR LLTPL+A+HLQ ++ +AV+Q G +SGPKYG N D+A + + PF+ SN+++ V +G + PE+G Y+DQ+ +S L WV LRRNIIKRPFLATSEK +++CGASVL+ASAFHPS+ +KM AE AT C++VR+GLEG
Sbjct: 18 SKPIPDELVPQILAALETLDGASGAELEPARQRLASFLGTLFVKHNIAESDAFVLTAVAKRRLQLAGEGRSRGGCSSAQLLSVACGDGAASAELLRLCRALLDGEVLSAGEAEALGRRLYDSNEPAAARTLAAHVLRVRYETREEFAGLLRAQAATVDREGERAQTHSCPPFPAPPPLRTHERRIVQLAEPFDGIDRSPLLTPLIARHLQRRWRALAVTQVGPTSGPKYGPNARDLALALGADEAPFMRSNAEVAWRV-ARSGYL--PEYGMYIDQEAVSPALAEWVTLRRNIIKRPFLATSEKLVDSCGASVLIASAFHPSFTDKMFNMAEDATAFPACIIVRRGLEG 363
BLAST of mRNA_Ecto-sp9_F_contig10375.364.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A6T7WU54_9CRYP) HSP 1 Score: 235 bits (600), Expect = 2.060e-71 Identity = 134/278 (48.20%), Postives = 170/278 (61.15%), Query Frame = 1
Query: 187 SVRAGCSAGQVLSLAGGDKASADTQELALKLLSGETLDEEEAYRLGKRIFDVQQPSTVLCLCVQILRVRYESPSEWRGLIKAQQETLRVERFNPQVVSDAYQRGKKAGNNPRLVVQLAEPFDGMDRGELLTPLLAQHLQNKFNVVAVSQCGRSSGPKYGQNLLDIATGMTSLSTPFVHSNSDIERDVEVGNGGIDPPEFGWYVDQQEISLELDAWVDLRRNIIKRPFLATSEKFINTCGASVLVASAFHPSYAEKMMTCAETATDLKGCMVVRKGLEG 1020
S+RA C A +L+ A SA + LAL+LL G TL EEA LG+R+FD + + LC +LRVRYE+ EW GL+ AQ ETL RF D KA +VQLAEPFDG R E PL+A+HLQ ++ V VSQCG SSGPKYG NLL +A + S P SN DI G D P FGWYV Q + S L W +RRN++KRPFLAT+EK+++T GA VL+ASAFHPS+++KM AE A+ + C++VR+G EG
Sbjct: 14 SIRAACLA--LLAAAPAAAGSASLRGLALRLLDGHTLSREEARDLGRRLFDPDEAVELQVLCAHLLRVRYETMDEWCGLLDAQGETLDTGRFGAPRGRDILASAGKAR-----LVQLAEPFDGTHRSESFAPLIARHLQQRWGAVVVSQCGPSSGPKYGPNLLQLALAL-SPDAPLAASNLDIAE------AGADQPAFGWYVTQGDASGGLGRWGPIRRNVVKRPFLATAEKYLDTAGAGVLLASAFHPSFSDKMFLMAERASAFEACVIVRRGCEG 277
BLAST of mRNA_Ecto-sp9_F_contig10375.364.1 vs.
Match: Uncharacterized (protein n=1 Tax=Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_50_17 TaxID=1801857 RepID=A0A1G1P5S8_9BACT) HSP 1 Score: 183 bits (464), Expect = 2.010e-51 Identity = 108/254 (42.52%), Postives = 153/254 (60.24%), Query Frame = 1
Query: 259 QELALKLLSGETLDEEEAYRLGKRIFDVQQPSTVLCLCVQILRVRYESPSEWRGLIKAQQETLRVERFNPQVVSDAYQRGKKAGNNPRLVVQLAEPFDGMDRGELLTPLLAQHLQNKFNVVAVSQCGRSSGPKYGQNLLDIATGMTSLSTPFVHSNSDIERDVEVGNGGIDPPEFGWYVDQQEISLELDAWVDLRRNIIKRPFLATSEKFINTCGASVLVASAFHPSYAEKMMTCAETATDLKGCMVVRKGLEG 1020
QE+ +LL ETLD++ + +LG +F + ILRVRYE+ E+ GL+++ QET +E F +V +P +VQ+AEPFDG+D+ ++TPLLA+H+Q VS GR+SGPK+G NLLD+A G L F+ N D++ P++GWY+ Q+ +S +D WV+LR IIKRPFLAT E+F+N A +++ASAFHP YAEKM+T E A G ++VR GLEG
Sbjct: 29 QEICARLLRQETLDQKTSRQLGNFLFSDSAGDAARGMAASILRVRYETAQEYAGLLESLQET--IEGFFCEVPE----------GDP--IVQIAEPFDGVDQSYMVTPLLARHVQI-LGYRVVSLVGRNSGPKFGNNLLDVAEG---LQAQFLKRNVDLK---------CPKPDYGWYIHQKNLSRGMDRWVELRLQIIKRPFLATLERFVNPVRAQMIIASAFHPPYAEKMVTVGEGA-GYSGIIIVRNGLEG 254
BLAST of mRNA_Ecto-sp9_F_contig10375.364.1 vs.
Match: Uncharacterized (protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0W5T9_9ZZZZ) HSP 1 Score: 174 bits (442), Expect = 1.600e-47 Identity = 103/258 (39.92%), Postives = 153/258 (59.30%), Query Frame = 1
Query: 247 SADTQELALKLLSGETLDEEEAYRLGKRIFDVQQPSTVLCLCVQILRVRYESPSEWRGLIKAQQETLRVERFNPQVVSDAYQRGKKAGNNPRLVVQLAEPFDGMDRGELLTPLLAQHLQNKFNVVAVSQCGRSSGPKYGQNLLDIATGMTSLSTPFVHSNSDIERDVEVGNGGIDPPEFGWYVDQQEISLELDAWVDLRRNIIKRPFLATSEKFINTCGASVLVASAFHPSYAEKMMTCAETATDLKGCMVVRKGLEG 1020
S D + + + LL+ E LD E + LG+ +F ++ T L ILRVRY S E+ G++ + QET+ ++ +Q + +VQ++EPFDG +R +TPL+A +QN AVS GR+SGPK+ NLL+IA +L T F+++ ++ + P++GWY+ Q+ IS +DAWV+ R IIKRPFLAT E+FIN GA +L+ SAFHP+Y E M++ A+TA G +VV+ GLEG
Sbjct: 90 SPDIKNICIHLLNKENLDYETSKYLGEFLFSKEKGDTARGLITSILRVRYTSIDEYAGILSSMQETI----------NNFFQHSVEG----EPIVQISEPFDGFNRSYFITPLIASAVQN-LGFRAVSLVGRNSGPKFATNLLNIAQ---ALDTSFLNTAEELNKPK---------PDYGWYIHQKNISPAIDAWVEHRHQIIKRPFLATLERFINPVGAKILITSAFHPNYVETMLSIAQTA-GYAGIIVVQYGLEG 319
BLAST of mRNA_Ecto-sp9_F_contig10375.364.1 vs.
Match: Uncharacterized (protein n=1 Tax=Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_48_11 TaxID=1801856 RepID=A0A1G1NBX9_9BACT) HSP 1 Score: 172 bits (436), Expect = 1.410e-46 Identity = 100/254 (39.37%), Postives = 140/254 (55.12%), Query Frame = 1
Query: 259 QELALKLLSGETLDEEEAYRLGKRIFDVQQPSTVLCLCVQILRVRYESPSEWRGLIKAQQETLRVERFNPQVVSDAYQRGKKAGNNPRLVVQLAEPFDGMDRGELLTPLLAQHLQNKFNVVAVSQCGRSSGPKYGQNLLDIATGMTSLSTPFVHSNSDIERDVEVGNGGIDPPEFGWYVDQQEISLELDAWVDLRRNIIKRPFLATSEKFINTCGASVLVASAFHPSYAEKMMTCAETATDLKGCMVVRKGLEG 1020
+ + ++LL E LD AY+LGK + + V LRVRYE+ E+ G++K+ QET+ P D +VQLAEPFDG+D + TPLLAQ++Q+ ++ GR+SGPK G NLLD+A +L P N+D++ P +GWY +Q+ +S LD WV+LRR +KRP AT EKF+N A +++ SAFHP Y+EKM T AE A +V+R GLEG
Sbjct: 98 KNICVRLLQKEPLDFATAYQLGKFLLSQEPGDAARGFAVSTLRVRYETDDEYAGILKSLQETIAGPFRQPVAPGDP-------------LVQLAEPFDGVDHSYITTPLLAQYVQS-LGYRVINLVGRNSGPKVGNNLLDLAK---ALQIPLAAGNADLKNSK---------PSYGWYFNQENLSAPLDHWVELRRQTVKRPCFATLEKFLNPAQAQIIITSAFHPPYSEKMTTVAERA-GFPASIVIRNGLEG 324
BLAST of mRNA_Ecto-sp9_F_contig10375.364.1 vs.
Match: Anthranilate (phosphoribosyltransferase n=1 Tax=Pontibacter sp. SGAir0037 TaxID=2571030 RepID=A0A4P8RIL6_9BACT) HSP 1 Score: 172 bits (436), Expect = 1.570e-46 Identity = 108/259 (41.70%), Postives = 146/259 (56.37%), Query Frame = 1
Query: 244 ASADTQELALKLLSGETLDEEEAYRLGKRIFDVQQPSTVLCLCVQILRVRYESPSEWRGLIKAQQETLRVERFNPQVVSDAYQRGKKAGNNPRLVVQLAEPFDGMDRGELLTPLLAQHLQNKFNVVAVSQCGRSSGPKYGQNLLDIATGMTSLSTPFVHSNSDIERDVEVGNGGIDPPEFGWYVDQQEISLELDAWVDLRRNIIKRPFLATSEKFINTCGASVLVASAFHPSYAEKMMTCAETATDLKGCMVVRKGLEG 1020
A A+ +E+ LKLL E L EA +LG+ ++ + + +LR+RYE+ E++GL+ A + T +D Y R + AG P +VVQLAEPFDG++ L+TPLLAQ Q + AV GRS GPK N LD+ M F+ + ++ + PP FGW +DQQ +S+ LD WVD RR KRPFLAT EK +N A VLV S FH +Y EKM+T A A KG MV+++GLEG
Sbjct: 94 APAELKEIGLKLLDKEFLSIGEAEKLGQFMYSDEPGEAFRGMAASMLRIRYETDEEYQGLLNAAEATY----------ADQY-RARPAGTRPAVVVQLAEPFDGVEHSYLITPLLAQFFQ-QAGYPAVVTMGRSGGPKLALNTLDLYQDM---GCSFIENAGELAQT---------PPAFGWALDQQLLSVALDKWVDRRRLFFKRPFLATLEKVLNPLQAQVLVVSVFHLTYIEKMITLAAMA-GFKGVMVMKRGLEG 327
BLAST of mRNA_Ecto-sp9_F_contig10375.364.1 vs.
Match: Uncharacterized (protein n=1 Tax=Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_52_10 TaxID=1801858 RepID=A0A1G1NX68_9BACT) HSP 1 Score: 170 bits (431), Expect = 8.440e-46 Identity = 101/249 (40.56%), Postives = 142/249 (57.03%), Query Frame = 1
Query: 274 KLLSGETLDEEEAYRLGKRIFDVQQPSTVLCLCVQILRVRYESPSEWRGLIKAQQETLRVERFNPQVVSDAYQRGKKAGNNPRLVVQLAEPFDGMDRGELLTPLLAQHLQNKFNVVAVSQCGRSSGPKYGQNLLDIATGMTSLSTPFVHSNSDIERDVEVGNGGIDPPEFGWYVDQQEISLELDAWVDLRRNIIKRPFLATSEKFINTCGASVLVASAFHPSYAEKMMTCAETATDLKGCMVVRKGLEG 1020
+LL G+TL+ EA LG +F Q + ILRVRYE+ E+ GL+++ +TL P A +VQLAEPFDG+D ++TPL+AQ +Q + N VS GR+SGPK+G NLLD+A +L F+ S+S + + P +GW+V+QQ +S +D WV+ R IKRPFL+T E+F+N A + ++SAFHP Y EKM+T E A G ++VR GLEG
Sbjct: 103 RLLQGDTLNVREAEDLGDFLFSDQTGEGARGMAASILRVRYETVDEYEGLLRSMHKTLEAPFRIPIPKGPA-------------IVQLAEPFDGVDHSNMITPLIAQFIQ-RLNYRVVSHTGRNSGPKFGNNLLDLAK---ALRGRFLLSSSALADEA---------PAYGWFVNQQNLSPPIDQWVERRHQTIKRPFLSTLERFLNPFNAHIHISSAFHPPYGEKMLTICERA-GFPGSIIVRNGLEG 324
BLAST of mRNA_Ecto-sp9_F_contig10375.364.1 vs.
Match: anthranilate (phosphoribosyltransferase n=1 Tax=Botryobacter ruber TaxID=2171629 RepID=UPI000E0AB2C1) HSP 1 Score: 168 bits (426), Expect = 3.990e-45 Identity = 106/259 (40.93%), Postives = 146/259 (56.37%), Query Frame = 1
Query: 244 ASADTQELALKLLSGETLDEEEAYRLGKRIFDVQQPSTVLCLCVQILRVRYESPSEWRGLIKAQQETLRVERFNPQVVSDAYQRGKKAGNNPRLVVQLAEPFDGMDRGELLTPLLAQHLQNKFNVVAVSQCGRSSGPKYGQNLLDIATGMTSLSTPFVHSNSDIERDVEVGNGGIDPPEFGWYVDQQEISLELDAWVDLRRNIIKRPFLATSEKFINTCGASVLVASAFHPSYAEKMMTCAETATDLKGCMVVRKGLEG 1020
A AD + +KLLS ETL+ +EA LG +F + +LR+RYE+ +E++GL++A T S +++ NN +VQLAEPFDG++ ++TP+LA Q V VS GRS+GPKY N LDI L PF+ NSD+ + P++GW +DQQ +S LD WVD RR I KRPFLAT EK +N C A +LV S FH +Y +KM+T A A G +V+++GLEG
Sbjct: 89 APADMKATGVKLLSKETLNADEARILGNFLFSDLPGEAFRGMAASMLRMRYETDAEYQGLMEAAIATY----------SPSFRAAPPLDNN---LVQLAEPFDGVEHSYMITPILAHVFQEAGYPVVVSM-GRSAGPKYALNTLDI---YKELEAPFLQQNSDLAKPA---------PKYGWALDQQVLSPALDQWVDRRRLIFKRPFLATLEKVLNPCHAGILVTSVFHITYIDKMITLAGMA-GFSGVIVLKRGLEG 320
BLAST of mRNA_Ecto-sp9_F_contig10375.364.1 vs.
Match: Anthranilate (phosphoribosyltransferase n=1 Tax=Pontibacter sp. GY10130 TaxID=2603253 RepID=A0A5C8K6W1_9BACT) HSP 1 Score: 168 bits (426), Expect = 4.630e-45 Identity = 124/339 (36.58%), Postives = 174/339 (51.33%), Query Frame = 1
Query: 4 STPLPDRQAIGTLDKANADVEALERLASFLGTLFVKNKITETDEKVLAAAAKRRPKLKDVGSVRAGCSAGQVLSLAGGDKASADTQELALKLLSGETLDEEEAYRLGKRIFDVQQPSTVLCLCVQILRVRYESPSEWRGLIKAQQETLRVERFNPQVVSDAYQRGKKAGNNPRLVVQLAEPFDGMDRGELLTPLLAQHLQNKFNVVAVSQCGRSSGPKYGQNLLDIATGMTSLSTPFVHSNSDIERDVEVGNGGIDPPEFGWYVDQQEISLELDAWVDLRRNIIKRPFLATSEKFINTCGASVLVASAFHPSYAEKMMTCAETATDLKGCMVVRKGLEG 1020
S PLP L + +L +F G L K TE ++++L A DVG + Q L A A+ QE+ +KLL E L EEA LG ++ ++ + +LR+RYE+ E++GLI+A T F P A QR K ++VQLAEPFDG++ ++TPLLAQ QN ++ +S GRSSGPK N D+ L F+ N ++ + PP FGW +DQ+ +S LD WVD RR I+KRPFLATSEK +N A +L+ S FH +Y EKM+ A A KG +++++GLEG
Sbjct: 29 SKPLPQDLLEIILQYLETEALVPIQLGAFFGALMAKGP-TEPEKRLLQALVPSAAGTPDVGDLY------QHLC----PDAPANMQEIGIKLLRKEFLTLEEARELGTFLYADSPGESLRGMAASMLRIRYETMEEYQGLIEAATPT-----FTPGFKEPAPQRQK-------VLVQLAEPFDGVEHSYMVTPLLAQAFQND-GLLVISTVGRSSGPKLEVNAHDL---FKHLPGSFITENKELLQA---------PPTFGWALDQKTLSPALDKWVDRRRLILKRPFLATSEKVLNPAHADILITSVFHITYMEKMINLAAMA-GFKGVIILKRGLEG 330 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10375.364.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig10375.364.1 >prot_Ecto-sp9_F_contig10375.364.1 ID=prot_Ecto-sp9_F_contig10375.364.1|Name=mRNA_Ecto-sp9_F_contig10375.364.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=340bp MSTPLPDRQAIGTLDKANADVEALERLASFLGTLFVKNKITETDEKVLAAback to top mRNA from alignment at Ecto-sp9_F_contig10375:183..4272+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig10375.364.1 ID=mRNA_Ecto-sp9_F_contig10375.364.1|Name=mRNA_Ecto-sp9_F_contig10375.364.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=4090bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10375:183..4272+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig10375:183..4272+ >mRNA_Ecto-sp9_F_contig10375.364.1 ID=mRNA_Ecto-sp9_F_contig10375.364.1|Name=mRNA_Ecto-sp9_F_contig10375.364.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2040bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10375:183..4272+ (Ectocarpus species9 EcSCA_722f female)back to top |