mRNA_Ecto-sp9_F_contig10356.351.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig10356.351.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L369_9PHAE) HSP 1 Score: 137 bits (344), Expect = 7.460e-36 Identity = 71/74 (95.95%), Postives = 72/74 (97.30%), Query Frame = 1
Query: 1 SARRFSLLHLAAFEGSVDTILLLLSAGASVNAQDLDGWTPLHYAARNEMGGEVVVRALVAAGAEVDKANHRGRT 222
S RFSLLHLAAFEGSVDTILLLLSAGASVNAQDLDGWTPLHYAARNEMGG+VVVRALVAAGAEVDKANHRGRT
Sbjct: 83 SGWRFSLLHLAAFEGSVDTILLLLSAGASVNAQDLDGWTPLHYAARNEMGGKVVVRALVAAGAEVDKANHRGRT 156
BLAST of mRNA_Ecto-sp9_F_contig10356.351.1 vs.
Match: Ankyrin (repeat protein n=4 Tax=Histoplasma TaxID=5036 RepID=C0NPS0_AJECG) HSP 1 Score: 55.8 bits (133), Expect = 2.550e-7 Identity = 34/57 (59.65%), Postives = 40/57 (70.18%), Query Frame = 1
Query: 58 ILLLLSAGASVNAQDLDGWTPLHYAARNEMGG--EVVVRALVAAGAEVDKANHRGRT 222
I LL+S GA VNA+DL G TPLHYAARN E +V AL+AAGAE D + +GRT
Sbjct: 536 IHLLISHGADVNARDLTGATPLHYAARNVESRYQERIVAALLAAGAEPDCKDAKGRT 592
BLAST of mRNA_Ecto-sp9_F_contig10356.351.1 vs.
Match: Uncharacterized (protein n=1 Tax=Emergomyces pasteurianus Ep9510 TaxID=1447872 RepID=A0A1J9PGU3_9EURO) HSP 1 Score: 55.1 bits (131), Expect = 4.760e-7 Identity = 33/57 (57.89%), Postives = 39/57 (68.42%), Query Frame = 1
Query: 58 ILLLLSAGASVNAQDLDGWTPLHYAARN--EMGGEVVVRALVAAGAEVDKANHRGRT 222
I LL S GA +NA+DL G TPLHYAARN E +V AL+AAGAE D + +GRT
Sbjct: 520 IHLLTSHGADINARDLTGATPLHYAARNVESRHQERIVAALLAAGAEPDCKDSKGRT 576
BLAST of mRNA_Ecto-sp9_F_contig10356.351.1 vs.
Match: Uncharacterized (protein n=1 Tax=Blastomyces parvus TaxID=2060905 RepID=A0A2B7XKH4_9EURO) HSP 1 Score: 54.7 bits (130), Expect = 6.510e-7 Identity = 33/57 (57.89%), Postives = 39/57 (68.42%), Query Frame = 1
Query: 58 ILLLLSAGASVNAQDLDGWTPLHYAARNEMGG--EVVVRALVAAGAEVDKANHRGRT 222
I LL S GA +NA+DL G TPLHYAARN E +V AL+AAGAE D + +GRT
Sbjct: 519 IHLLTSHGADINARDLTGATPLHYAARNVESRYQERIVTALLAAGAEPDCKDSKGRT 575
BLAST of mRNA_Ecto-sp9_F_contig10356.351.1 vs.
Match: Uncharacterized (protein n=1 Tax=Emmonsia crescens TaxID=73230 RepID=A0A2B7Z8A2_9EURO) HSP 1 Score: 54.3 bits (129), Expect = 8.890e-7 Identity = 32/55 (58.18%), Postives = 38/55 (69.09%), Query Frame = 1
Query: 64 LLLSAGASVNAQDLDGWTPLHYAARN--EMGGEVVVRALVAAGAEVDKANHRGRT 222
LL S GA +NA+DL G TPLHYAARN E +V AL+AAGAE D + +GRT
Sbjct: 494 LLTSHGADINARDLAGATPLHYAARNVESRHQERIVAALLAAGAEPDCKDFKGRT 548
BLAST of mRNA_Ecto-sp9_F_contig10356.351.1 vs.
Match: Uncharacterized (protein n=4 Tax=Candidatus Synechococcus spongiarum TaxID=431041 RepID=A0A0G8ATC3_9SYNE) HSP 1 Score: 51.2 bits (121), Expect = 9.690e-7 Identity = 30/61 (49.18%), Postives = 38/61 (62.30%), Query Frame = 1
Query: 40 EGSVDTILLLLSAGASVNAQDLDGWTPLHYAARNEMGGEVVVRALVAAGAEVDKANHRGRT 222
E S D + L GA NA+D DGWTPLH+AAR+ EVV +AL+ AGA+ + GRT
Sbjct: 2 EASSDDVGRCLLEGAEPNARDEDGWTPLHFAARDSKTSEVV-QALLDAGADPSARDGYGRT 61
BLAST of mRNA_Ecto-sp9_F_contig10356.351.1 vs.
Match: protein (phosphatase 1 regulatory subunit 12A-like n=1 Tax=Nilaparvata lugens TaxID=108931 RepID=UPI00193D60B0) HSP 1 Score: 53.5 bits (127), Expect = 1.510e-6 Identity = 30/67 (44.78%), Postives = 40/67 (59.70%), Query Frame = 1
Query: 22 LHLAAFEGSVDTILLLLSAGASVNAQDLDGWTPLHYAARNEMGGEVVVRALVAAGAEVDKANHRGRT 222
LH+AA +G + + LLL GA VNAQDLDGWTPLH AA + + L ++D N+ G+T
Sbjct: 89 LHVAAAKGYIKVMELLLEGGADVNAQDLDGWTPLHAAAH--WNQKDAAQLLTKHNCQMDMKNYVGQT 153
BLAST of mRNA_Ecto-sp9_F_contig10356.351.1 vs.
Match: ANK_REP_REGION (domain-containing protein n=1 Tax=Globodera pallida TaxID=36090 RepID=A0A183CEN0_GLOPA) HSP 1 Score: 53.5 bits (127), Expect = 1.610e-6 Identity = 32/67 (47.76%), Postives = 38/67 (56.72%), Query Frame = 1
Query: 22 LHLAAFEGSVDTILLLLSAGASVNAQDLDGWTPLHYAARNEMGGEVVVRALVAAGAEVDKANHRGRT 222
LH+AA +G I +L AGA VNAQD +GWTPLH AA G R L+ GA +D H G T
Sbjct: 225 LHVAASKGYNKLIGMLSRAGADVNAQDFEGWTPLHAAAH--WGERDACRILMENGANLDALTHTGHT 289
BLAST of mRNA_Ecto-sp9_F_contig10356.351.1 vs.
Match: Uncharacterized (protein n=4 Tax=Paracoccidioides TaxID=38946 RepID=C1G5C5_PARBD) HSP 1 Score: 53.5 bits (127), Expect = 1.670e-6 Identity = 33/57 (57.89%), Postives = 38/57 (66.67%), Query Frame = 1
Query: 58 ILLLLSAGASVNAQDLDGWTPLHYAARN--EMGGEVVVRALVAAGAEVDKANHRGRT 222
I LL S GA +NA+DL G TPLHYAARN E +V AL+AAGAE D + GRT
Sbjct: 536 INLLTSHGADINARDLRGATPLHYAARNVESRHQERIVAALLAAGAEPDCKDFSGRT 592
BLAST of mRNA_Ecto-sp9_F_contig10356.351.1 vs.
Match: PRKG1_interact (domain-containing protein n=1 Tax=Penaeus vannamei TaxID=6689 RepID=A0A3R7ME92_PENVA) HSP 1 Score: 53.5 bits (127), Expect = 1.680e-6 Identity = 30/67 (44.78%), Postives = 41/67 (61.19%), Query Frame = 1
Query: 22 LHLAAFEGSVDTILLLLSAGASVNAQDLDGWTPLHYAARNEMGGEVVVRALVAAGAEVDKANHRGRT 222
LH+A+ +G + + LLL AG+ +NAQDLDGWTPLH AA G V L A++D N G++
Sbjct: 210 LHVASAKGYIKVMSLLLEAGSDINAQDLDGWTPLHAAAH--WGQREAVEILAENMADMDVRNFVGQS 274 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10356.351.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig10356.351.1 >prot_Ecto-sp9_F_contig10356.351.1 ID=prot_Ecto-sp9_F_contig10356.351.1|Name=mRNA_Ecto-sp9_F_contig10356.351.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=74bp SARRFSLLHLAAFEGSVDTILLLLSAGASVNAQDLDGWTPLHYAARNEMGback to top mRNA from alignment at Ecto-sp9_F_contig10356:4147..4368+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig10356.351.1 ID=mRNA_Ecto-sp9_F_contig10356.351.1|Name=mRNA_Ecto-sp9_F_contig10356.351.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=222bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10356:4147..4368+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig10356:4147..4368+ >mRNA_Ecto-sp9_F_contig10356.351.1 ID=mRNA_Ecto-sp9_F_contig10356.351.1|Name=mRNA_Ecto-sp9_F_contig10356.351.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=444bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10356:4147..4368+ (Ectocarpus species9 EcSCA_722f female)back to top |