mRNA_Ecto-sp9_F_contig10334.336.1 (mRNA) Ectocarpus species9 EcSCA_722f female
|
Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig10334.336.1 vs.
Match: TNase-like (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVK5_9PHAE) HSP 1 Score: 282 bits (722), Expect = 2.700e-95 Identity = 140/143 (97.90%), Postives = 142/143 (99.30%), Query Frame = 1
Query: 1 MTGKKNSEQTLQIRLYAVDCPEVAHFGNPAQPFSAEAKAFTKEALQGKPVKIKLLSMDQYNRAVCRVQYGKWPFRKDISAELLKNGLGVVYRQGGAEYDGREESLTEYENSAKSRKEGVWSRSNGETPAQYKARIKQQRPAAA 429
MTGKKNSEQTLQ+RLYAVDCPEVAHFGNPAQPFSAEAKAFTKEALQGKPVKIKLLSMDQYNRAVCRV+YGKWPFRKDISAELLKNGLGVVYRQGGAEYDGREESLTEYENSAK RKEGVWSRSNGETPAQYKARIKQQRPAAA
Sbjct: 65 MTGKKNSEQTLQVRLYAVDCPEVAHFGNPAQPFSAEAKAFTKEALQGKPVKIKLLSMDQYNRAVCRVRYGKWPFRKDISAELLKNGLGVVYRQGGAEYDGREESLTEYENSAKRRKEGVWSRSNGETPAQYKARIKQQRPAAA 207
BLAST of mRNA_Ecto-sp9_F_contig10334.336.1 vs.
Match: TNase-like (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT5_ECTSI) HSP 1 Score: 281 bits (720), Expect = 5.010e-94 Identity = 141/143 (98.60%), Postives = 141/143 (98.60%), Query Frame = 1
Query: 1 MTGKKNSEQTLQIRLYAVDCPEVAHFGNPAQPFSAEAKAFTKEALQGKPVKIKLLSMDQYNRAVCRVQYGKWPFRKDISAELLKNGLGVVYRQGGAEYDGREESLTEYENSAKSRKEGVWSRSNGETPAQYKARIKQQRPAAA 429
MTGKKNSEQTLQIRLYAVDCPEVAHFGNPAQPFSAEAKAFTKEALQGKPVKIKLLSMDQYNRAVCRVQYGKWPFRKDISAELLKNGLGVVYRQGGAEYD REESLTEYE SAKSRKEGVWSRSNGETPAQYKARIKQQRPAAA
Sbjct: 134 MTGKKNSEQTLQIRLYAVDCPEVAHFGNPAQPFSAEAKAFTKEALQGKPVKIKLLSMDQYNRAVCRVQYGKWPFRKDISAELLKNGLGVVYRQGGAEYDSREESLTEYEKSAKSRKEGVWSRSNGETPAQYKARIKQQRPAAA 276
BLAST of mRNA_Ecto-sp9_F_contig10334.336.1 vs.
Match: TNase-like (domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WZK0_9STRA) HSP 1 Score: 140 bits (354), Expect = 6.160e-39 Identity = 70/133 (52.63%), Postives = 93/133 (69.92%), Query Frame = 1
Query: 13 KNSEQTLQIRLYAVDCPEVAHFGNPAQPFSAEAKAFTKEALQGKPVKIKLLSMDQYNRAVCRVQYGKWPFRKDISAELLKNGLGVVYRQGGAEYDGREESLTEYENSAKSRKEGVWSRSNG-ETPAQYKARIK 408
K S+ TLQIRL +D PE A FG+P QPF EAK + LQG+ + + LL DQY RAVC VQYG+WPFR+D S E+LK GLG VYRQ GA Y G++E+ + E +AK +K+G+WS+ E+ + YKAR++
Sbjct: 115 KLSDHTLQIRLAGIDTPETAKFGHPGQPFGDEAKKWLTSTLQGRKLTLTLLHKDQYARAVCLVQYGRWPFRRDTSEEILKVGLGQVYRQAGAVYGGKQENYEKLEETAKKKKKGIWSQGKKMESSSDYKARMR 247
BLAST of mRNA_Ecto-sp9_F_contig10334.336.1 vs.
Match: TNase-like (domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X2T6_GLOUD) HSP 1 Score: 139 bits (350), Expect = 2.400e-38 Identity = 74/136 (54.41%), Postives = 92/136 (67.65%), Query Frame = 1
Query: 4 TGKKNSEQTLQIRLYAVDCPEVAHFGNPAQPFSAEAKAFTKEALQGKPVKIKLLSMDQYNRAVCRVQYGKWPFRKDISAELLKNGLGVVYRQGGAEYDGREESLTEYENSAKSRKEGVWSRSNG-ETPAQYKARIK 408
TGK SE TLQIRL A+D PE A FGNP QPF EAK + + L GK + + LL DQY+RAVC V+YG WPFR++ S E+LK GL VYRQ GA Y G++E + E A+ RK G+WS+ ET + YKAR+K
Sbjct: 111 TGKM-SEHTLQIRLAAIDTPETAKFGNPGQPFGDEAKKWLSDNLDGKKLTLTLLHKDQYSRAVCMVEYGHWPFRRNASEEILKVGLANVYRQAGAVYGGKQERFEKLEAQAQKRKIGIWSQGKKLETSSAYKARMK 245
BLAST of mRNA_Ecto-sp9_F_contig10334.336.1 vs.
Match: TNase-like (domain-containing protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0N995_PHYIT) HSP 1 Score: 137 bits (346), Expect = 2.820e-38 Identity = 70/133 (52.63%), Postives = 89/133 (66.92%), Query Frame = 1
Query: 13 KNSEQTLQIRLYAVDCPEVAHFGNPAQPFSAEAKAFTKEALQGKPVKIKLLSMDQYNRAVCRVQYGKWPFRKDISAELLKNGLGVVYRQGGAEYDGREESLTEYENSAKSRKEGVWSRSNG-ETPAQYKARIK 408
K S+ TLQIRL +D PE A FGNP QPF EAK + L+G+ + + LL DQY RAVC VQYG WPFR+D SAE+LK GLG VYRQ GA Y G++E E +K +K G+WS+ E+ + YKAR++
Sbjct: 69 KLSDHTLQIRLAGIDTPETAKFGNPGQPFGDEAKKWLSSTLEGRKLTLTLLHKDQYARAVCLVQYGWWPFRRDASAEILKVGLGQVYRQAGAVYGGKQEIYEMLEEKSKKKKRGIWSQGKKMESSSDYKARMR 201
BLAST of mRNA_Ecto-sp9_F_contig10334.336.1 vs.
Match: TNase-like (domain-containing protein n=4 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3X1X4_9STRA) HSP 1 Score: 135 bits (341), Expect = 6.610e-38 Identity = 68/133 (51.13%), Postives = 89/133 (66.92%), Query Frame = 1
Query: 13 KNSEQTLQIRLYAVDCPEVAHFGNPAQPFSAEAKAFTKEALQGKPVKIKLLSMDQYNRAVCRVQYGKWPFRKDISAELLKNGLGVVYRQGGAEYDGREESLTEYENSAKSRKEGVWSRSNG-ETPAQYKARIK 408
K S+ TLQIRL +D PE A FGNP QPF +AK + L+GK + + LL DQY RAVC VQYG+WPFR+D S E+LK GLG VYRQ GA Y G++E E A+ +K+G+WS+ E+ + YK R++
Sbjct: 38 KLSDHTLQIRLAGIDTPETAKFGNPGQPFGDDAKKWLASTLEGKKLTLTLLHKDQYARAVCMVQYGRWPFRRDASEEILKVGLGQVYRQAGAVYGGKQEIYEGLEEKARKKKKGIWSQGKKMESSSDYKDRMR 170
BLAST of mRNA_Ecto-sp9_F_contig10334.336.1 vs.
Match: TNase-like (domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4FC27_9STRA) HSP 1 Score: 138 bits (347), Expect = 7.130e-38 Identity = 69/133 (51.88%), Postives = 90/133 (67.67%), Query Frame = 1
Query: 13 KNSEQTLQIRLYAVDCPEVAHFGNPAQPFSAEAKAFTKEALQGKPVKIKLLSMDQYNRAVCRVQYGKWPFRKDISAELLKNGLGVVYRQGGAEYDGREESLTEYENSAKSRKEGVWSRSNG-ETPAQYKARIK 408
K S+ TLQIRL +D PE A FGNP QPF +AK + L+GK + + LL DQY RAVC VQYG+WPFR+D S E+LK GLG VYRQ GA Y G++E E A+ +K+G+WS+ E+ + YKAR++
Sbjct: 116 KLSDHTLQIRLAGIDTPETAKFGNPGQPFGDDAKKWLASTLEGKKLTLTLLHKDQYARAVCMVQYGRWPFRRDASEEILKVGLGQVYRQAGAVYGGKQEIYEGLEEKARKKKKGIWSQGKKMESSSDYKARMR 248
BLAST of mRNA_Ecto-sp9_F_contig10334.336.1 vs.
Match: TNase-like (domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2QL12_PHYPN) HSP 1 Score: 136 bits (342), Expect = 3.350e-37 Identity = 69/133 (51.88%), Postives = 89/133 (66.92%), Query Frame = 1
Query: 13 KNSEQTLQIRLYAVDCPEVAHFGNPAQPFSAEAKAFTKEALQGKPVKIKLLSMDQYNRAVCRVQYGKWPFRKDISAELLKNGLGVVYRQGGAEYDGREESLTEYENSAKSRKEGVWSRSNG-ETPAQYKARIK 408
K S+ TLQIRL +D PE A FGNP QPF EAK + L+ + + + LL DQY RAVC VQYG WPFR+D S E+LK GLG VYRQ GA Y G++E + E AK +K+G+WS+ E+ + YKAR++
Sbjct: 109 KLSDHTLQIRLAGIDTPETAKFGNPGQPFGDEAKQWLTSTLESRKLTLTLLHKDQYARAVCMVQYGWWPFRRDASEEILKVGLGQVYRQAGAVYGGKQEIYEKLEEKAKKKKKGIWSQGKKMESSSDYKARMR 241
BLAST of mRNA_Ecto-sp9_F_contig10334.336.1 vs.
Match: TNase-like (domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YC33_9STRA) HSP 1 Score: 135 bits (341), Expect = 5.390e-37 Identity = 69/131 (52.67%), Postives = 90/131 (68.70%), Query Frame = 1
Query: 19 SEQTLQIRLYAVDCPEVAHFGNPAQPFSAEAKAFTKEALQGKPVKIKLLSMDQYNRAVCRVQYGKWPFRKDISAELLKNGLGVVYRQGGAEYDGREESLTEYENSAKSRKEGVWSRSNG-ETPAQYKARIK 408
SE TLQ+RL A+D PE A FGN QPF EAK + +AL GK + + LL DQY+RAVC V+YG+WPFRK+ S E+LK GL VYRQ GA Y G++E E A+ +K G+WS+ E+ A+YKAR++
Sbjct: 115 SEHTLQVRLAAIDTPETAKFGNSGQPFGDEAKRWLADALGGKNLTLTLLHKDQYSRAVCMVEYGRWPFRKNASEEILKAGLANVYRQAGAVYGGKQELFERLEAQAQKKKIGIWSQGKRFESSAEYKARLR 245
BLAST of mRNA_Ecto-sp9_F_contig10334.336.1 vs.
Match: TNase-like (domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7G472_9STRA) HSP 1 Score: 135 bits (341), Expect = 5.680e-37 Identity = 68/133 (51.13%), Postives = 89/133 (66.92%), Query Frame = 1
Query: 13 KNSEQTLQIRLYAVDCPEVAHFGNPAQPFSAEAKAFTKEALQGKPVKIKLLSMDQYNRAVCRVQYGKWPFRKDISAELLKNGLGVVYRQGGAEYDGREESLTEYENSAKSRKEGVWSRSNG-ETPAQYKARIK 408
K S+ TLQIRL +D PE A FGNP QPF +AK + L G+ + + LL DQY RAVC VQYG+WPFR+D S E+LK GLG VYRQ GA Y G++E+ + E A+ K G+WS+ E+ + YKAR++
Sbjct: 116 KLSDHTLQIRLAGIDTPETAKFGNPGQPFGDDAKKWLTSTLNGRKLTLTLLYKDQYARAVCLVQYGRWPFRRDASEEVLKVGLGQVYRQAGAVYGGKQETYEKLEEKARKTKRGIWSQGKKLESSSDYKARMR 248 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10334.336.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig10334.336.1 >prot_Ecto-sp9_F_contig10334.336.1 ID=prot_Ecto-sp9_F_contig10334.336.1|Name=mRNA_Ecto-sp9_F_contig10334.336.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=144bp MTGKKNSEQTLQIRLYAVDCPEVAHFGNPAQPFSAEAKAFTKEALQGKPVback to top mRNA from alignment at Ecto-sp9_F_contig10334:1004..2885+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig10334.336.1 ID=mRNA_Ecto-sp9_F_contig10334.336.1|Name=mRNA_Ecto-sp9_F_contig10334.336.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=1882bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10334:1004..2885+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig10334:1004..2885+ >mRNA_Ecto-sp9_F_contig10334.336.1 ID=mRNA_Ecto-sp9_F_contig10334.336.1|Name=mRNA_Ecto-sp9_F_contig10334.336.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=864bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10334:1004..2885+ (Ectocarpus species9 EcSCA_722f female)back to top |