mRNA_Ecto-sp9_F_contig10298.304.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig10298.304.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU73_9PHAE) HSP 1 Score: 553 bits (1426), Expect = 1.190e-188 Identity = 279/440 (63.41%), Postives = 336/440 (76.36%), Query Frame = 1
Query: 4 VLDGRWDDALWLHKEWAATQLLSQPFMDYWFKSLCMLENPLIRVHAKFCVALRKTILSWAYNWIRGAGGYFLRGAGGVTERLPPGMRLAEAADFSLLLVRRINELRDNPEKYFPDLIEFAKDKLSKDE----------------------FAHFMQNFENEEGGFFWEMEARWEKWADMHQHLPYSMARMACSSFYEGKWHGSERAFEHAVGQEFARGLLLALWPERYESAEWSSWEEANNFFEILVGDLSEATTATEKDELTFGVFSKLNEDAAFRKEVEDYAASAHEKIEVPSADTDVENPAPRESGFQMIWHFPLLYEWACHAIFFALIHQQLVESVFSKYDTCTRKHDSRELDLVRLGQFRSAQSRKVERSDATNEEIRKAGNKAIEVAKAARRAASIAVPNERQIRKRSHDAIKYLQDANDKAKYGSSWQVRSVV 1257
+L+ RWD+ WLH EWAA +LL PFMDYWFKSLCML++PLIRVHAKFCVALRK +LSWAYNWIRG GGY L G GGV ERLP GMRLA+ ADFSLLLV R+ ELR +P+KYFPDL+ +A+ LS++E AHFM+NF+NE+ G F EM ARW KW DMHQHLPYSMAR+ACSSF+EGKW GSE+A EHAVGQE+AR LLALWPE E AEW W+E + + EIL DLSEA T EKDELTFG+FSKLN A FR EVE Y+ SA EK E+ D D E+ APR SGF MIW FPLLYEWA HAI FA IHQQLV+SV S YDTCT+KHDSRE+ +VRLGQFRS+QSR+V+R ATN+EIR+AG+K I VA+ +++A+ A+PN+ Q+RKR D ++L+D ++K+K+GS+W VRSV+
Sbjct: 329 LLEDRWDEVRWLHLEWAAAKLLGTPFMDYWFKSLCMLDDPLIRVHAKFCVALRKVVLSWAYNWIRGEGGYLLEGRGGVAERLPAGMRLADIADFSLLLVERLEELRMHPKKYFPDLLAWAEKTLSEEEVSANAAQTLLLFDPVPYCPMLQLAHFMRNFQNEKSGLFREMIARWTKWMDMHQHLPYSMARLACSSFFEGKWAGSEKAIEHAVGQEYARASLLALWPELNEGAEWVGWDEEHEYLEILRDDLSEAETTEEKDELTFGMFSKLNASAEFRGEVERYSLSAREKKEIV-VDDDAESQAPRVSGFDMIWSFPLLYEWARHAILFAPIHQQLVKSVCSTYDTCTQKHDSREIGIVRLGQFRSSQSRRVQRLHATNKEIREAGDKVIAVARELKKSAAQAIPNDWQLRKRVLDTKQFLRDQSEKSKHGSNWVVRSVL 767
BLAST of mRNA_Ecto-sp9_F_contig10298.304.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN38_9PHAE) HSP 1 Score: 397 bits (1020), Expect = 4.320e-132 Identity = 220/392 (56.12%), Postives = 256/392 (65.31%), Query Frame = 1
Query: 85 DYWFKSLCMLENPLIRVHAKFCVALRKTILSWAYNWIRGAGGYFLRGAGGVTERLPPGMRLAEAADFSLLLVRRINELRDNPEKYFPDLIEFAKDKLSKDEFAHFMQNFENEEGGFFWEMEARWEKWADMHQHLPYSMARMACSSFYEGKWHGSERAFEHAVGQEFARGLLLALWPERYESAEWSSWEEANNFFEILVGDLSEATTATEKDELTFGVFSKLNEDAAFRKEVEDYAASAHEKIEVPSADTDVENPAPRESGFQMIWHFPLLYEWACHAIFFALIHQQLVESVFSKYDTCTRKHDSRELDLVRLGQFRSAQSRKVERSDATNEEIRKAGNKAIEVAKAARRAASIAVPNERQIRKRSHDAIKYLQDANDKAKYGSSWQVRSVVE 1260
+ W +S ML++PLIRVHAKFCVALRK +LSWAYNWIRG GGYFL G GGV ERLPPGMRLAEAADFSLLLV+R+ + Q + SM R+ACSSFYEGKW GSE FEHAVGQE AR LLLA WP RYES EW WEE N F E ++LT G+FSKL A FR+E+E YAASAHEK +V S D DVEN PR SGF MIW FP LYEWACHA+FFA IHQQLVES S YDT T+KHDSRELD+VRLGQF S SR+VER D++N+EIR G+KAI VA +++AS AVPNERQ+R HD K+L+D ++K+K+GS W V+SV+E
Sbjct: 83 ERWDESTYMLDDPLIRVHAKFCVALRKAVLSWAYNWIRGEGGYFLEGTGGVAERLPPGMRLAEAADFSLLLVKRL-----------------------------------------------------ERSQRM--SMTRLACSSFYEGKWAGSEEGFEHAVGQEVARALLLAFWPNRYESTEWKGWEEQNTFRE---------------NKLTLGMFSKLAASAEFREELERYAASAHEKKKVVS-DVDVENQTPRVSGFDMIWTFPQLYEWACHAVFFAPIHQQLVESSSSTYDTGTQKHDSRELDIVRLGQFSSRGSRRVERLDSSNQEIRDEGDKAIAVATVLKKSASHAVPNERQLRNGEHDWRKFLKDKSEKSKHGSKWVVKSVME 403
BLAST of mRNA_Ecto-sp9_F_contig10298.304.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSZ3_9PHAE) HSP 1 Score: 359 bits (922), Expect = 8.720e-120 Identity = 180/265 (67.92%), Postives = 215/265 (81.13%), Query Frame = 1
Query: 442 MEARWEKWADMHQHLPYSMARMACSSFYEGKWHGSERAFEHAVGQEFARGLLLALWPERYESAEWSSWEEANNFFEILVGDLSEATTATEKDELTFGVFSKLNEDAAFRKEVEDYAASAHEKIEVPSADTDVENPAPRESGFQMIWHFPLLYEWACHAIFFALIHQQLVESVFSKYDTCTRKHDSRELDLVRLGQFRSAQSRKVERSDATNEEIRKAGNKAIEVAKAARRAASIAVPNERQIRKRSHDAIKYLQDANDKAKYGSS 1236
M ARW W DMHQHLPYSMAR+ACSSF+EGKW GSE+AFEHAVGQE+AR LLALWPE YE AEW W+E + + EIL DLSEA T EKDELTFG+FSKLN A FR EVE YA SA EK E+ D D EN APR SGF MIW FPLLYEWACHAI FA IHQQLVES FS +DTCT+KHDSRE+D+VRLGQFRS+ SR+V+R ATN+EIR+AG+KAI VA+ +++A+ A+PNERQ+RKR+HD ++L+D ++K+K+GS+
Sbjct: 1 MIARWTIWMDMHQHLPYSMARLACSSFFEGKWAGSEKAFEHAVGQEYARASLLALWPELYEGAEWVGWDEEHEYLEILRDDLSEAETTEEKDELTFGMFSKLNASAEFRGEVERYALSAREKKEIV-VDDDAENQAPRVSGFDMIWSFPLLYEWACHAILFAPIHQQLVESDFSTFDTCTQKHDSREIDIVRLGQFRSSHSRRVQRLYATNKEIRQAGDKAIAVARELKKSAAHAIPNERQLRKRTHDTKQFLRDQSEKSKHGSN 264
BLAST of mRNA_Ecto-sp9_F_contig10298.304.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXZ1_ECTSI) HSP 1 Score: 335 bits (859), Expect = 6.280e-110 Identity = 168/258 (65.12%), Postives = 207/258 (80.23%), Query Frame = 1
Query: 487 PYSMARMACSSFYEGKWHGSERAFEHAVGQEFARGLLLALWPERYESAEWSSWEEANNFFEILVGDLSEATTATEKDELTFGVFSKLNEDAAFRKEVEDYAASAHEKIEVPSADTDVENPAPRESGFQMIWHFPLLYEWACHAIFFALIHQQLVESVFSKYDTCTRKHDSRELDLVRLGQFRSAQSRKVERSDATNEEIRKAGNKAIEVAKAARRAASIAVPNERQIRKRSHDAIKYLQDANDKAKYGSSWQVRSVVE 1260
P +++ YEGKW G+++A EHAVG+EFAR LL+ALWPE+ ESAEW W+E ++ IL GDLSEATT EKD+LTFG++++LNE A FRKEVE YAASAHEK EV S D DV+NP PR S F MIW+FPLLYEWA HAIF A+IH+QLV SVFSKYDTCT++HDSRE+D+VRLGQFRSAQSR++ + A+N EIR+AGNKAI A+A R+AAS AVPNERQ RKR HD ++++ A +KAKYG WQVRSV++
Sbjct: 9 PLQHGQVSLQLLYEGKWAGADKANEHAVGKEFARALLVALWPEKNESAEWREWQEEHDILGILEGDLSEATTPGEKDKLTFGMYTELNESAEFRKEVEVYAASAHEKKEVVSDDLDVDNPPPRVSAFGMIWNFPLLYEWARHAIFLAVIHEQLVGSVFSKYDTCTQQHDSREIDIVRLGQFRSAQSRRIRKLHASNHEIREAGNKAIAEARALRKAASEAVPNERQQRKRGHDVTQFVRTATNKAKYGPGWQVRSVLD 266
BLAST of mRNA_Ecto-sp9_F_contig10298.304.1 vs.
Match: Uncharacterized (protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIQ1_ECTSI) HSP 1 Score: 293 bits (751), Expect = 7.440e-91 Identity = 172/398 (43.22%), Postives = 233/398 (58.54%), Query Frame = 1
Query: 4 VLDG------RWDDALWLHKEWAATQLLSQPFMDYWFKSLCMLENPLIRVHAKFCVALRKTILSWAYNWIRGAGGYFLRGAGGVTERLPPGMRLAEAADFSLLLVRRINELRDNPEKYFPDLIEFAKDKLSKDEFAHFMQNFENEEGGFFWEMEARWEKWADMHQHLPYSMARMACSSFYEGKWHGSERAFEHAVGQEFARGLLLALWPERYESAEWSSWEEANNFFEILVGDLSEATTATEKDELTFGVFSKLNEDAAFRKEVEDYAASAHEKIEVPSADTDVENPAPR-ESGFQMIWHFPLLYEWACHAIFFALIHQQLVESVFSKYDTCTRKHDSRELDLVRLGQFRSAQSRKVERSDATNEEIRKAGNKAIEVAKAARRAASIAVPNERQIRKR 1176
V+DG RW+ WL E+AA L F +YW +S ML +PL+RVH F L + + WAYNWIRG GG+FL+G G V +L PGMRL E ADFS LL+ ++ +R +P+ YF ++E + LS+ FM NF +E+ GFF E + RW KW + HQ LP SMAR+ C SF+ E A E AVG EFAR L W YE + E + LV DL T A KDELTFG+FS+++ D + R E+E YA S D +V+ AP+ S ++ FPLLY+ CH +F IHQQL+E+ FSK+D+C +K D E+D+VR+G ++SA+SR + +DAT E+IR AG K +E A+ A+ + P E RKR
Sbjct: 76 VMDGAKLLCKRWEQVEWLFCEYAARNLNKTTFRNYWLQSAYMLRDPLVRVHVMFTARLGELLFDWAYNWIRGKGGFFLKGEG-VGRQLFPGMRLVEVADFSRLLLVKLETIRKDPKTYFAAVLERVQTTLSEAMAKLFMTNF-SEDKGFFAEFKQRWIKWMERHQQLPLSMARIGCPSFFARTGIMGEGAVEQAVGPEFARAFLHVAWSALYEGEPRT--EREREYRTQLVKDLGGTTDARRKDELTFGLFSRIDSDRSVRNELEQYANSGW-------GDKEVDQGAPKGTSALARLFDFPLLYKLVCHRFYFVPIHQQLIEAFFSKFDSCAQKTDMAEMDIVRVGGWKSAESRDIVCADATGEKIRAAGKKVLEKAREAKAVSHARKPAENLSRKR 462
BLAST of mRNA_Ecto-sp9_F_contig10298.304.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI13_9PHAE) HSP 1 Score: 259 bits (661), Expect = 7.270e-78 Identity = 159/392 (40.56%), Postives = 215/392 (54.85%), Query Frame = 1
Query: 4 VLDG------RWDDALWLHKEWAATQLLSQPFMDYWFKSLCMLENPLIRVHAKFCVALRKTILSWAYNWIRGAGGYFLRGAGGVTERLPPGMRLAEAADFSLLLVRRINELRDNPEKYFPDLIEFAKDKLSKDEFAHFMQNFENEEGGFFW-EMEARWEKWADMHQHLPYSMARMACSSFYEGKWHGSERAFEHAVGQEFARGLLLALWPERYESAEWSSWEEANNFFEILVGDLSEATTATEKDELTFGVFSKLNEDAAFRKEVEDYAASAHEKIEVPSADTDVENPAPR-ESGFQMIWHFPLLYEWACHAIFFALIHQQLVESVFSKYDTCTRKHDSRELDLVRLGQFRSAQSRKVERSDATNEEIRKAGNKAIEVAKAARRAASIAVPN 1155
V+DG RW+ WL E+AA L F +YW +S CML +PL+RVH F L + + WAYNWI G GG+FL+G G V RL P MRL EAADFS LL++++ +R +P+ Y L++ + LS D E + G FF E + RW K HQ LP SMAR+ C SFY A E AVG EFAR WP YE + E + L DL T A KDELT G+FS ++ D + R E+E YA S D +++ AP+ S ++ PLLY CH +F IHQQL+E+ FSKYD+C +K D E+D+VR+G ++SA+SR + DA +++IR AG K ++ A A+ + PN
Sbjct: 76 VMDGAKLLCERWEQVEWLFCEYAARNLNKTTFRNYWVQSACMLRDPLVRVHVMFTARLGELLFDWAYNWIHGKGGFFLKGEG-VGRRLFPAMRLVEAADFSCLLLQKLETIRKDPQTYVAALLDRVRTTLS-DPMRGESFRVELQRGQFFIAEFKKRWIKSMQRHQELPLSMARIGCPSFYARTGIMGGGAVEQAVGPEFARAFPHVAWPGLYEGEPRT--ERERQYRTQLAKDLGGTTEARRKDELTLGLFSCIDGDLSVRSELEQYANSGW-------GDKEIDESAPKGTSALARLFDLPLLYRLVCHRFYFVPIHQQLIEAFFSKYDSCAKKTDMAEMDVVRVGGWKSAESRDIVCVDAIDDQIRGAGKKVLKEATEAKAISHARKPN 456
BLAST of mRNA_Ecto-sp9_F_contig10298.304.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMW8_9PHAE) HSP 1 Score: 219 bits (559), Expect = 2.100e-63 Identity = 149/398 (37.44%), Postives = 198/398 (49.75%), Query Frame = 1
Query: 4 VLDG------RWDDALWLHKEWAATQLLSQPFMDYWFKSLCMLENPLIRVHAKFCVALRKTILSWAYNWIRGAGGYFLRGAGGVTERLPPGMRLAEAADFSLLLVRRINELRDNPEKYFPDLIEFAKDKLSKDEFAHFMQNFENEEGGFFWEMEARWEKWADMHQHLPYSMARMACSSFYEGKWHGSERAFEHAVGQEFARGLLLALWPERYESAEWSSWEEANNFFEILVGDLSEATTATEKDELTFGVFSKLNEDAAFRKEVEDYAASAHEKIEVPSADTDVENPAPRE-SGFQMIWHFPLLYEWACHAIFFALIHQQLVESVFSKYDTCTRKHDSRELDLVRLGQFRSAQSRKVERSDATNEEIRKAGNKAIEVAKAARRAASIAVPNERQIRKR 1176
V+DG RW+ L ++A L +YW +S ML +P VH F L++ + WAYNWI G GG+FL+G G V RL PGMRL E ADFS LL++++ +R +P+ YF L++ + LS FM F +E+ FF E + RW KW HQ LP SMAR+ C SFY A E AVG EFAR L WP YE + E + LV DL T A KDELTFG+FS ++ D + R E+E YA S + +++ AP+ S + FPLLY+ CH +F IHQQL+E+ FSK C +DAT ++I AGNK + A A+ + P E RKR
Sbjct: 3 VIDGAKLLCERWEQVERLFCDFARN-LNKTTVRNYWVQSAYMLRDPFFHVHVMFTARLKELLFDWAYNWIHGKGGFFLKGEG-VDRRLFPGMRLVEVADFSRLLLQKLETIRKDPKTYFAALLDRVRATLSDPMVKFFMLAF-SEDRVFFAEFKKRWIKWMQRHQELPLSMARIGCPSFYARTGIMGGGAVEQAVGPEFARAFLHVAWPGLYEGEPRT--EREREYRTQLVKDLGGTTEARRKDELTFGLFSCIDGDLSVRSELEQYANSGW-------GNKEIDESAPKSTSELARLLDFPLLYQLVCHRFYFVPIHQQLIEAFFSKNIVC---------------------------ADATGDQISGAGNKVLTEATEAKAISHARKPAENLSRKR 361
BLAST of mRNA_Ecto-sp9_F_contig10298.304.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQF6_9PHAE) HSP 1 Score: 213 bits (543), Expect = 1.210e-61 Identity = 148/392 (37.76%), Postives = 197/392 (50.26%), Query Frame = 1
Query: 4 VLDGRWDDALWLHKEWAATQLLSQPFMDYWFKSLCMLENPLIRVHAKFCVALRKTILSWAYNWIRGAGGYFLRGAGGVTERLPPGMRLAEAADFSLLLVRRINELRDNPEKYFPDLIEFAKDKLSKDEFAHFMQNFENEEGGFFWEMEARWEKWADMHQHLPYSMARMACSSFYEGKWHGSERAFEHAVGQEFARGLLLALWPERYESAEWSSWEEANNFFEILVGDLSEATTATEKDELTFGVFSKLNEDAAFRKEVEDYAASAHEKIEVPSADTDVENPAPR-ESGFQMIWHFPLLYEWACHAIFFALIHQQLVESVFSKYDTCTRKHDSRELDLVRLGQFRSAQSRKVERSDATNEEIRKAGNKAIEVAKAARRAASIAVPNERQIRKR 1176
+L RW+ WL ++AA L F +YW +S+ +L +P++RVH L + + WAYNWIRG GG+FL+ GV RL PGMRL E ADFS LL+ ++ +R +PE YF A +KL F N +E+ GFF + RW KW + HQ LP SMAR+ C SFY +E A E AVG +FAR L WP Y+ + E F LV E T A KDELTFG+FS ++ D + R E+E YA S +D +V+ AP+ S ++ +PLLY+ CH +F IHQQ D+V +DAT E IR AG K +E AK A+ + P E RKR
Sbjct: 9 LLCDRWEQVSWLFCKYAARYLNKTTFRNYWLQSVYLLRDPILRVHVMLTARLGELLFDWAYNWIRGKGGFFLK-CEGVGRRLFPGMRLVEVADFSRLLLLKLETIRKDPETYF------AAEKL-------FTTNC-SEDKGFFALFKKRWIKWMERHQQLPLSMARIGCPSFYARTGIMAEGAVEQAVGPKFARAFLHVAWPGLYDGEPRT--EREREFRTQLVKYSGEITEARRKDELTFGLFSCIDSDLSVRNELEQYANSGW-------SDKEVDQGAPKGTSALACLFDYPLLYKLVCHRFYFVPIHQQ---------------------DIVC--------------ADATGENIRAAGIKVLEKAKEAKAVSHARQPAEPWSRKR 341
BLAST of mRNA_Ecto-sp9_F_contig10298.304.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8G1_9PHAE) HSP 1 Score: 160 bits (405), Expect = 2.330e-42 Identity = 92/203 (45.32%), Postives = 118/203 (58.13%), Query Frame = 1
Query: 16 RWDDALWLHKEWAATQLLSQPFMDYWFKSLCMLENPLIRVHAKFCVALRKTILSWAYNWIRGAGGYFLRGAGGVTERLPPGMRLAEAADFSLLLVRRINELRDNPEKYFPDLIEFAKDKLSKDEFAHFMQNFENEEGGFFWEMEARWEKWADMHQHLPYSMARMACSSFYEGKWHGSERAFEHAVGQEFARGLLLALWPERYE 624
RW L +E+AA L F +YW +S ML NPL+RVH F L + + WA NWIRG GG+FL+G G V RL PGMRL E AD S LL+ ++ +R +P+ YF ++E + LS+ FM NF +E+ FF E + RW KW + HQ LP SMAR+AC SFY ++ A E G EFAR L WP YE
Sbjct: 46 RWKRVEKLVREYAARYLNKTTFRNYWLQSAYMLRNPLVRVHVVFTARLGELLFDWANNWIRGKGGFFLKGEG-VGRRLFPGMRLVEVADCSRLLLLKLETIRKDPKTYFAAVLERVRTTLSEPMEKLFMTNF-SEDKVFFAEFKKRWIKWMERHQQLPLSMARIACPSFYARTGIMADGAVE---GPEFARAFLHVAWPGLYE 243
BLAST of mRNA_Ecto-sp9_F_contig10298.304.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR45_9PHAE) HSP 1 Score: 152 bits (384), Expect = 2.560e-38 Identity = 94/218 (43.12%), Postives = 119/218 (54.59%), Query Frame = 1
Query: 385 EFAHFMQNFENEEGGFFWEMEARWEKWADMHQHLPYSMARMACSSFYEGKWHGSERAFEHAVGQEFARGLLLALWPERYESAEWSSWEEANNFFEILVG-DLSEATTATEKDELTFGVFSKLNEDAAFRKEVEDYAASAHEKIEVPSADTDVENPAPRESGFQMIWHFPLLYEWACHAIFFALIHQQLVESVFSKYDTCTRKHDSRELDLVRLGQFRS 1035
E HFM NF +E+ FF E RW+KW HQ LP SMAR+ C SFY + A E AVG E+AR L WPERYE S E + + +G D A KDELTFG+FS + EDA R EVE YA S EV D E + ++ FP LY++ C +F IHQQL+E+ FSKYDTC +K D +D VR+G +++
Sbjct: 159 EKKHFMVNF-SEDSFFFAEFNMRWKKWMQRHQELPLSMARIGCPSFYARMGIMGKGAVEQAVGPEYARAFLHVGWPERYEGEPRSERERE---YRVQLGEDFGGVIDARRKDELTFGLFSIVEEDAEMRCEVEGYAESGFGDKEV-----DEEAEKGTTALVRLFEKFPRLYKFVCVRFYFVPIHQQLIEAFFSKYDTCAKKTDVAVMDSVRVGSWQT 367 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10298.304.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig10298.304.1 >prot_Ecto-sp9_F_contig10298.304.1 ID=prot_Ecto-sp9_F_contig10298.304.1|Name=mRNA_Ecto-sp9_F_contig10298.304.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=420bp MDYWFKSLCMLENPLIRVHAKFCVALRKTILSWAYNWIRGAGGYFLRGAGback to top mRNA from alignment at Ecto-sp9_F_contig10298:2568..4083- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig10298.304.1 ID=mRNA_Ecto-sp9_F_contig10298.304.1|Name=mRNA_Ecto-sp9_F_contig10298.304.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=1516bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10298:2568..4083- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig10298:2568..4083- >mRNA_Ecto-sp9_F_contig10298.304.1 ID=mRNA_Ecto-sp9_F_contig10298.304.1|Name=mRNA_Ecto-sp9_F_contig10298.304.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2520bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10298:2568..4083- (Ectocarpus species9 EcSCA_722f female)back to top |