mRNA_Ecto-sp9_F_contig1029.299.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig1029.299.1
Unique NamemRNA_Ecto-sp9_F_contig1029.299.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
[Close]
BLAST of mRNA_Ecto-sp9_F_contig1029.299.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQH4_ECTSI)

HSP 1 Score: 1012 bits (2616), Expect = 0.000e+0
Identity = 515/539 (95.55%), Postives = 520/539 (96.47%), Query Frame = 2 
Query:  329 GAGSAKLSYVLLQKLLKLSEYLPRPRGNAASDDAASADGDNNTATATGGRGFCFKYVITDFSHANFGFWMNHPRLQELFTLGVVDFAVFDAEARPGEVGGGKGTTKGDSESEXXXXXXXXXXXXXXXXXXXXXG-NAGLWGSGSLRLELSGEELRPGDLDNPVIVVANYVFDSLKQDAFRVHGGVLEELLCTTSIPSSGDVDPSSLAPELLRYMRCSWSPVRRRPAECYPDDARLAKALETLAASHHEASFLVPVGAVRAVDCLRALSKGGKALVIAGDKGYVHDSELEGTRDPHLAVHGSFSCMVNFKLLHLMCEAEGGSVLHSQHLDGFKCSAMAYGLDPKAYPQFRMAFKESTACFSPNGFSSFQRQLKDESRGLGLRPALALLRLSQHDPDVFYKFKQQVFIDKGPYAGEKLQNDIRRDVKLVHELYFPLQPSKDVAFEIGRIFMGLKDFDSAAELFRDSQRYCGVHHVSWYNMGVCFFYLHHLDQAEKCFSESLALCPDYPDAIKWRQKLADVKNFLAGNEPQQPQEQQPQTTV 1942
            GAGSAKLSYVLLQKLLKLSEYLP+PRGNAASDDAASADGDNNTATATGGRGFCFKYVITDFSHANFGFWMNHPRLQELFTLGVVDFAVFDAEARPGEVGGGKGTTK D+ESEXXXXXXXXXXX          G +AGLWGSG LRLELSGEELRPGDLDNPVIVVANYVFDSLKQDAFRVHGGVLEELLCTTSIPSSGDVDPSSLAPELLRYMRCSWSPVRRRPAECYPDDARLAKALE LAASHH+ASFLVPVGAVRAVDCLRALSKGGKALVIAGDKGYVHDSELEGTRDPHLAVHGSFSCMVNFKLLHLMCEAEGGSVLHSQHLDGFKCSAM YGLDPKAYPQFRM FKESTACFSPNGFSSFQRQLKDESRGLGLRPALALLRLSQHDPDVFYKFKQ VFIDKGPYAGEKLQNDIRRDVKLVHELYFPLQPSKDVAFEIGRIFMGLKDFDSAAELFRDSQRYCGVHHVSWYNMGVCFFYLHHLDQAEKCFSESLALCPDYPDAIKWRQKLADVK+FLAGNEPQQPQEQQPQ  V
Sbjct:   20 GAGSAKLSYVLLQKLLKLSEYLPQPRGNAASDDAASADGDNNTATATGGRGFCFKYVITDFSHANFGFWMNHPRLQELFTLGVVDFAVFDAEARPGEVGGGKGTTKRDAESEXXXXXXXXXXXDPAASGSCVGGGDAGLWGSGCLRLELSGEELRPGDLDNPVIVVANYVFDSLKQDAFRVHGGVLEELLCTTSIPSSGDVDPSSLAPELLRYMRCSWSPVRRRPAECYPDDARLAKALEALAASHHQASFLVPVGAVRAVDCLRALSKGGKALVIAGDKGYVHDSELEGTRDPHLAVHGSFSCMVNFKLLHLMCEAEGGSVLHSQHLDGFKCSAMGYGLDPKAYPQFRMTFKESTACFSPNGFSSFQRQLKDESRGLGLRPALALLRLSQHDPDVFYKFKQ-VFIDKGPYAGEKLQNDIRRDVKLVHELYFPLQPSKDVAFEIGRIFMGLKDFDSAAELFRDSQRYCGVHHVSWYNMGVCFFYLHHLDQAEKCFSESLALCPDYPDAIKWRQKLADVKSFLAGNEPQQPQEQQPQAAV 557
[Close]
BLAST of mRNA_Ecto-sp9_F_contig1029.299.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXC2_9PHAE)

HSP 1 Score: 476 bits (1225), Expect = 5.990e-159
Identity = 230/235 (97.87%), Postives = 231/235 (98.30%), Query Frame = 2 
Query: 1238 MVNFKLLHLMCEAEGGSVLHSQHLDGFKCSAMAYGLDPKAYPQFRMAFKESTACFSPNGFSSFQRQLKDESRGLGLRPALALLRLSQHDPDVFYKFKQQVFIDKGPYAGEKLQNDIRRDVKLVHELYFPLQPSKDVAFEIGRIFMGLKDFDSAAELFRDSQRYCGVHHVSWYNMGVCFFYLHHLDQAEKCFSESLALCPDYPDAIKWRQKLADVKNFLAGNEPQQPQEQQPQTTV 1942
            MVNFKLLHLMCEAEGGSVLHSQHLDGFKCSAMAYGLDPKAYPQFRMAFKESTACFSPNGFSSFQRQLKDESRGLGLRPALALLRLSQHDPDVFYKFKQ VFIDKGPYAGEKLQNDIRRDVKLVHELYFPLQPSKDVAFEIGRIFMGLKDFDSAAELFRDSQRYCGVHHVSWYNMGVCFFYLHHLDQAEKCFSESLALCPDYPDAIKWRQKLADVK+FLAGNEPQ PQEQQPQ  V
Sbjct:    1 MVNFKLLHLMCEAEGGSVLHSQHLDGFKCSAMAYGLDPKAYPQFRMAFKESTACFSPNGFSSFQRQLKDESRGLGLRPALALLRLSQHDPDVFYKFKQ-VFIDKGPYAGEKLQNDIRRDVKLVHELYFPLQPSKDVAFEIGRIFMGLKDFDSAAELFRDSQRYCGVHHVSWYNMGVCFFYLHHLDQAEKCFSESLALCPDYPDAIKWRQKLADVKSFLAGNEPQHPQEQQPQAAV 234
[Close]
BLAST of mRNA_Ecto-sp9_F_contig1029.299.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ46_9STRA)

HSP 1 Score: 419 bits (1076), Expect = 1.860e-133
Identity = 244/526 (46.39%), Postives = 311/526 (59.13%), Query Frame = 2 
Query:  296 SSQKPVYIVEVGAGSAKLSYVLLQKLLKLSEYLPRPRGNAASDDAASADGDNNTATATGGRGFCFKYVITDFSHANFGFWMNHPRLQELFTLGVVDFAVFDAEARPGEVGGGKGTTKGDSESEXXXXXXXXXXXXXXXXXXXXXGNAGLWGSGSLRLELSGEELRPGDLDNPVIVVANYVFDSLKQDAFRVH-GGVLEELLCTTSIPSSGDVDPSSLAPELLRYMRCSWSPVRRRPAECYPDDARLAKALETLAASHHEASFLVPVGAVRAVDCLRALSKGGKALVIAGDKGYVHDSELEGTRDPHLAVHGSFSCMVNFKLLHLMCEAEGGSVLHSQHLDGFKCSAMAYGLDPKAYPQFRMAFKESTACFSPNGFSSFQRQLKDESRGLGLRPALALLRLSQHDPDVFYKFKQQVFIDKGPYAGEKLQNDIRRDVKLVHELYFPLQPSKDVAFEIGRIFMGLKDFDSAAELFRDSQRYCGVHHVSWYNMGVCFFYLHHLDQAEKCFSESLALCPDYPDAIKWRQKL 1870
            ++ +P+YIVE+GAG+AKLS+VLL KLL L ++ PR     A                       FKY+ITD + + F F+  H  L+ LF  G++D A ++AE                                                 G+L+LE+SGE L+PG L++PV+ VANYVFDSL+QDAFRV  GG LEELL T S  ++     +SLAPE+LR+++C+                               +SFL+PVGA+ A+  LRAL+  G+ +V+AGDKG+   SE++G RDPH+A+HGSFSCMVNF  L L  EA GG  L S  L G +                          F P+GFS+ QR LK+ES+  GLR ALA++RLSQHDPDVFYKFKQ  FIDK P+A EKLQNDIR D++ V+  Y+PL PSKDVAFE+GRI+MGLKDF  A ELF DSQ++CGVHHVSWYNMGVC +YL+ LD A  CF ESLALCPDYPDA+KWR+KL
Sbjct:    9 ATSQPIYIVELGAGAAKLSFVLLHKLLGLRQFWPRREDGGAP----------------------FKYIITDVTDSTFQFFREHSCLRPLFESGLLDLARYNAEE-----------------------------------------------GGALQLEVSGEVLQPGTLEHPVVCVANYVFDSLRQDAFRVTAGGELEELLSTVSAAAAPADVRASLAPEVLRHIKCTSG---------------------GRGGVGSGSSFLMPVGALAALRNLRALTARGQLVVLAGDKGHTQLSEMDGQRDPHIALHGSFSCMVNFYALRLFVEAAGGCALSS--LLGGR--------------------------FGPDGFSTLQRCLKEESKTPGLRSALAVVRLSQHDPDVFYKFKQ-AFIDKAPHASEKLQNDIRHDMRRVYSCYYPLLPSKDVAFELGRIYMGLKDFAQAVELFSDSQKHCGVHHVSWYNMGVCHYYLNQLDAAAHCFDESLALCPDYPDALKWRRKL 415
[Close]
BLAST of mRNA_Ecto-sp9_F_contig1029.299.1 vs.
Match: Hypothetical (protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CMV9_9STRA)

HSP 1 Score: 410 bits (1055), Expect = 1.310e-126
Identity = 245/597 (41.04%), Postives = 323/597 (54.10%), Query Frame = 2 
Query:   95 RFSETALWKLQREFYEKSEVKCWQECVVPNFVTSNCFIAQAYAHSIASFLRDHLGRRDKIPDGSEWGSSQKPVYIVEVGAGSAKLSYVLLQKLLKLSEYLPRPRGNAASDDAASADGDNNTATATGGRGFCFKYVITDFSHANFGFWMNHPRLQELFTLGVVDFAVFDAEARPGEVGGGKGTTKGDSESEXXXXXXXXXXXXXXXXXXXXXGNAGLWGSGSLRLELSGEELRP--GDLDNPVIVVANYVFDSLKQDAFRVHGGVLEELLCTTSIPSSGDVDPSSLAPELLRYMRCSWSPVRRRPAEC-YPDDARLAKALETLAASHHEASFLVPVGAVRAVDCLRALSKGGKALVIAGDKGYVHDSELEGTRDPHLAVHGSFSCMVNFKLLHLMCEAEGGSVLHSQHLDGFKCSAMAYGLDPKAYPQFRMAFKESTACFSPNGFSSFQRQLKDESRGLGLRPALALLRLSQHDPDVFYKFKQQVFIDKG--PYAGEKLQNDIRRDVKLVHELYFPLQPSKDVAFEIGRIFMGLKDFDSAAELFRDSQRYCGVHHVSWYNMGVCFFYLHHLDQAEKCFSESLALCPDYPDAIKWRQKL 1870
            R  ++ LW LQR FY++  +  W E +VPNFVT+N F+A AYA SI   +RD L      P     G   KP+YIVEVGAG  KL +++ ++LL++ E+ P   G                        F FKYV+TDF+  N  FWM H    ELF +GV+D AV+DAE                                                  S+ L  S E L    G + NP++V+ NY+FD+L+ DAFR+  G L+E        S+ D +  + AP +++ M   WS     PA+  +  D      + + A     ASF+VPVG +  +  L A+S GG+ L++ GDKGYV ++ELEG RDPH+AVHGSFS MVNF  L L  E  GG  + + HLDGFKC+    GL  +A    R AFK +   F P  FS+ QR +K+E     L+  LALLRLS+HD +VFYKFKQ V IDK   PYA + +Q DIR D+  V E Y+PLQ SKDV FEIGR+ MGLKD+  A   F  S   CG HHV+++NMG+C +YL   + A KCF  SL L PDY +A  WR+KL
Sbjct:  191 RLKDSLLWDLQRSFYDEVAIGAWSEAIVPNFVTTNAFLASAYAKSIMGLIRD-LFDSPSAP-----GDRAKPLYIVEVGAGHGKLGFLICRELLRMREFFPAGHGLE----------------------FPFKYVMTDFTAHNVEFWMQHASFAELFEMGVLDCAVWDAEKET-----------------------------------------------SMTLLRSKEVLSADSGLVTNPLVVITNYIFDTLRTDAFRIVDGELQETRIAIDSSSAADAEEPT-APSVIKRMSHRWS-YEAVPADADFFGDEDFNYVVRSYAERLENASFMVPVGGLSLIRSLSAMS-GGRLLLLTGDKGYVREAELEGHRDPHIAVHGSFSVMVNFHALRLYVERLGGFAMTTPHLDGFKCAHFFLGLPREATMHTRWAFKNNIEEFGPENFSTLQRCIKEECTNPSLKHVLALLRLSRHDSEVFYKFKQ-VLIDKTMYPYAADNVQRDIREDIAGVEETYYPLQSSKDVCFEIGRLLMGLKDYRGAVGYFERSNELCGQHHVTYHNMGICCYYLDEFETALKCFDASLDLKPDYGEAADWRKKL 708
[Close]
BLAST of mRNA_Ecto-sp9_F_contig1029.299.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY0_9PHAE)

HSP 1 Score: 362 bits (928), Expect = 7.470e-115
Identity = 193/240 (80.42%), Postives = 199/240 (82.92%), Query Frame = 2 
Query:  149 EVKCWQECVVPNFVTSNCFIAQAYAHSIASFLRDHLGRRDKIPDGSEWGS-SQKPVYIVEVGAGSAKLSYVLLQKLLKLSEYLPRPRGNAASDDAASADGDNNTATATGGRGFCFKYVITDFSHANFGFWMNHPRLQELFTLGVVDFAVFDAEARPGEVGGGKGTTKGDSESEXXXXXXXXXXXXXXXXXXXXXGNAGLWGSGSLRLELSGEELRPGDLDNPVIVVANYVFDSLKQDAFR 865
            EVKCWQECVVPNFVTSNCFIAQAYA +IASFLRDHLGRR+K      W +  ++P    E GAGSAKLSYVLLQKLLKLSEYLPRPRGNAASD AASADGDNNTAT  GGRGFCFKYVITDFSHANFGFWMNHPRLQELFTLGVVDFAVFDAEARPGEVGGGKGTTKGD+ESE                     G AGLWGSG LRLELSGEELRPGDLDNPVIVVANYVFDSLKQDAFR
Sbjct:    4 EVKCWQECVVPNFVTSNCFIAQAYASAIASFLRDHLGRREK-----GWVAVGEQP----EAGAGSAKLSYVLLQKLLKLSEYLPRPRGNAASDGAASADGDNNTAT--GGRGFCFKYVITDFSHANFGFWMNHPRLQELFTLGVVDFAVFDAEARPGEVGGGKGTTKGDAESEPPPSPEEGPDPAAPGTCGGG-GGAGLWGSGCLRLELSGEELRPGDLDNPVIVVANYVFDSLKQDAFR 231
[Close]
BLAST of mRNA_Ecto-sp9_F_contig1029.299.1 vs.
Match: Hypothetical (protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812W741_9DINO)

HSP 1 Score: 331 bits (848), Expect = 2.350e-98
Identity = 216/645 (33.49%), Postives = 314/645 (48.68%), Query Frame = 2 
Query:   47 AVMTEPAARSVIDDKKRFSETALWKLQREFYEKSEVKCWQECVVPNFVTSNCFIAQAYAHSIASFLRD-HLGRRDKIPDGSEWGSSQKPVYIVEVGAGSAKLSYVLLQKLLKLSEYLPRPRGNAASDDAASADGDNNTATATGGRGFCFKYVITDFSHANFGFWMNHPRLQELFTLGVVDFAVFDAEARPGEVGGGKGTTKGDSESEXXXXXXXXXXXXXXXXXXXXXGNAGLWGSGSLRLELSGEELRPGDLDNPVIVVANYVFDSLKQDAFRVHGGVLEELLCTTSIPSS------------------GDVDPSSLAPE---LLRYMRCSWS----PVRRRPAECYPDDARLAKALETLAASHHEASFLVPVGAVRAVDCLRALSKGGKALVIAGDKGYVHDSELEGTRDPHLAVHGSFSCMVNFKLLHLMCEAEGGSVLHSQHLDGFKCSAMAYGLDPKAYPQFRMAFKESTACFSPNGFSSFQRQLKDESRGLGLRPALALLRLSQHDPDVFYKFKQQVFIDKGPYA-GEKLQNDIRRDVKLVHELYFPLQPSKDVAFEIGRIFMGLKDFDSAAELFRDSQRYCGVHHVSWYNMGVCFFYLHHLDQAEKCFSESLALCPD-YPDAIKWRQKLADVKNFLAG 1897
            A  +  A   V+++ K   E+ LW+LQ  FY    +  W + +VPNFV+SN F+A+ YA  I ++ RD  LG     P         +PVY++EVGAG  KL+++LL  L  + E  P                         G    F+ ++TDF+  N  FW+ H  L+     G++D AVFDA                                                   SLRL    + L P +L NPVI + NY+FD+L  DAF+V GG L +    TS  S+                  G   P +  P    +++ + C WS     V   P E Y  D  LA  L+       EAS LVP+G +  +  L  LSKG + +++ GDK Y   SELEG RDPH+A+HGSFS MVN   + L  +A+GG  L + ++DGFKC+A+ +G  P+   + R+A+++    F P  FS  QR +KDE+    L  ALA++R +Q D DVFYKFK  +  +    +  +KL++D+  DVK +   Y+PLQ SKD++FE+ R+ MGL  +  A E F+ S   CG HHV+WYN+ +C F++     A++ F++SL      Y +A  W  K  +    L G
Sbjct:    3 ATSSSAAGGIVLEEAKPLRESILWRLQSAFYNDVSIDAWSKAIVPNFVSSNSFLAKCYARMILAYARDWFLGNGAADPS--------QPVYVLEVGAGHGKLTHLLLYHLNDMREAWPP------------------------GVEVPFQIIMTDFTQNNVDFWLKHEPLKAHVESGLLDMAVFDAVY-----------------------------------------------DCSLRLVHGKKTLNPTNLANPVIAITNYIFDTLPHDAFQVRGGALYQASVRTSTASASEEAQRKVQQVLGKAAAEGRPVPGTAVPVEAGMIKRLGCEWSYQEVDVETLP-EPYAGDPALASVLQWYQGKVEEASVLVPIGGLALLRNLLTLSKG-RCMLLLGDKAYSKLSELEGVRDPHIALHGSFSLMVNLHAVDLYAQAKGGFSLMTPYIDGFKCAAVVFGESPEGLVETRLAWEDVMVDFGPENFSCVQRCIKDETASPSLATALAVIRAAQWDSDVFYKFKATILANSSSSSVPDKLKSDLYEDVKRISATYYPLQSSKDISFELSRVLMGLGRYAEAVEGFQRSMAQCGEHHVTWYNIALCQFHMGAFPAAKELFTKSLKQSGGRYENAKLWLDKTEEKLAALEG 566
[Close]
BLAST of mRNA_Ecto-sp9_F_contig1029.299.1 vs.
Match: Uncharacterized (protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8MAC6_BLAHO)

HSP 1 Score: 322 bits (824), Expect = 1.860e-95
Identity = 193/614 (31.43%), Postives = 313/614 (50.98%), Query Frame = 2 
Query:   77 VIDDKKRFSETALWKLQREFYEKSEVKCWQECVVPNFVTSNCFIAQAYAHSIASFLRDHLGRRDKIPDGSEWGSSQKPVYIVEVGAGSAKLSYVLLQKLLKLSEYLPRPRGNAASDDAASADGDNNTATATGGRGFCFKYVITDFSHANFGFWMNHPRLQELFTLGVVDFAVFDAEARPGEVGGGKGTTKGDSESEXXXXXXXXXXXXXXXXXXXXXGNAGLWGSGSLRLELSGEELRPGDLDNPVIVVANYVFDSLKQDAFRVHGGVLEELLCTTSIPSSGDVDPSSLAPELLRYMRCSWSPVRRRPAECYPDDARLAKALE----------TLAASHHEASFLVPVGAVRAVDCLRALSKGGKALVIAGDKGYVHDSELEGTRD-PHLAVHGSFSCMVNFKLLHLMCEAEGGSVLHSQHLDGFKCSAMAYGLDPKAYPQFRMAFKESTACFSPNGFSSFQRQLKDESRGLGLRPALALLRLSQHDPDVFYKFKQQVFIDKGPYAGEKLQNDIRRDVKLVHELYFPLQPSKDVAFEIGRIFMGLKDFDSAAELFRDSQRYCGVHHVSWYNMGVCFFYLHHLDQAEKCFSESLALCPDYPDAIKWRQKLADVKN 1885
            VI +     E+ +W LQ +FY      CW E +VP F+TSN +IA  YA+ I  ++ D+  R D   D        KP+YIVEVGAG  KL +++L  L +L+E++P                         G    + YVI+DF+     F  +H R+ E    GVVDFAVFD E               DSE                                   L++SG +L    ++ PVI +ANYVF+ L++ +  ++ G++ E      I    D + S+   +++  M+  WS       + +  D  L   +           +   ++   + L+P+GA+R +  L +LS+G + L+I  DK + H+ +L  T++ PH+A+HGSFS M NF  L  +  + GG+  H+ +  G + +A A G  P    +F+ A++     F P+ FS  QR ++DE+    L+  LAL+RLS+ + +VFYKFKQ V +D  PYA ++LQ+D + D+  +   ++PL  SKDV F++GR+ MGL+D++++  LF+ S   CG H+V+W+N+G+C++Y+  L ++   F+  L + P+Y DA  WR ++ +  N
Sbjct:    7 VIQEATPLHESMIWDLQNQFYINKGPACWTEAIVPQFITSNSYIAYQYANCILGYINDYYSRPDAKKD--------KPIYIVEVGAGHGKLGFLILNHLEELAEFMPE------------------------GVPKPYLYVISDFTQNIVDFCKSHKRMAEHINRGVVDFAVFDCEK--------------DSE---------------------------------FSLQISGAKLSSETVETPVIAIANYVFNGLREQSISINNGIVSE----GCIKILADPNVSATDIDIISRMKLEWSYKPIPDVDAHFQDPVLHDLVHQSDFWNSINPSYLQNNETLNVLLPLGALRFIRTLESLSRG-QFLLITADKAHAHEEDLRLTKENPHIAIHGSFSMMANFHALRQVFLSRGGASFHTPYYTGLQVAAFALGETP--LEEFQFAWENVLLAFDPDSFSQLQRCIRDETPSPSLKNILALIRLSRFESEVFYKFKQ-VLVDHIPYASDRLQSDFKSDILHIAANFYPLSASKDVDFDLGRLSMGLRDYETSIRLFKKSIELCGEHYVTWHNLGICYYYMDDLKESMNSFNRCLEIQPEYQDAKSWRARVEEKLN 533
[Close]
BLAST of mRNA_Ecto-sp9_F_contig1029.299.1 vs.
Match: Type (II protein arginine methyltransferase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GZ17_PHYRM)

HSP 1 Score: 326 bits (835), Expect = 3.430e-95
Identity = 220/655 (33.59%), Postives = 321/655 (49.01%), Query Frame = 2 
Query:   44 RAVMTEPAARSVIDDKKRFSETALWKLQREFYEKSEVKCWQECVVPNFVTSNCFIAQAYAHSIASFLRDHLGRRDKIPDGSEWGSSQKPVYIVEVGAGSAKLSYVLLQKLLKLSEYLPRPRGNAASDDAASADGDNNTATATGGRGFCFKYVITDFSHANFGFWMNHPRLQELFTLGVVDFAVFDAEARPGEVGGGKGTTKGDSESEXXXXXXXXXXXXXXXXXXXXXGNAGLWGSGSLRLELSGEELRPGDLDNPVIVVANYVFDSLKQDAFRVHGGVLEELLCTTSIPSSGDVDPSSLAPELLRYMRCSWSPVRRRPAECYPDDARLAKALETLAASHHE--------ASFLVPVGAVRAVDCLRALSKGGKALVIAGDKGYVHDSELEGTRDPHLAVHGSFSCMVNFKLLHLMCEAEGGSVLHS-QHLDGFKCSAMA-------------------YG--LDPKA------YPQFRMAFKESTACFSPNGFSSFQRQLKDESRGLGLRPALALLRLSQHDPDVFYKFKQQVFIDKGPYAGEKLQNDIRRDVKLVHELYFPLQPSKDVAFEIGRIFMGLKDFDSAAELFRDSQRYCGVHHVSWYNMGVCFFYLHHLDQAEKCFSESLALCPDYPDAIKWRQKLADVKNFLAGN 1900
            RA+  +   R  ++D   F+   LWKL   FY++  V+ W + +VP+F+TSN FIA+ Y++ + ++ RD +  R     GS    SQ P YIVE+GAGS K S+ LL+ L ++   L  P  N                          +Y++TDF+  NF FW  HP L      G+VDFA+FDA            TT  D+E                                 LRL  SG  +RPGDL NP+ ++ANY+FD+L  D F+V  GVL+E L   S+ S    +P  L PE+++ +  ++     +  E Y  +A+       +   +HE        A+ LVP+GA+ A++ L ALSK G  + ++GDKG  +     G  DPH+AVHGSFS MVN+  + +   + GG  LHS Q     K SA                     YG  LD         +P    AF++    F PN F   Q+  K++++   L+  LAL++LS  DPDVFYKF+  V +D+ P A  KL+ D+   + LV + Y+ L   KDVAFEIGR++ GL ++DSA   +  S +  G HHV+ +NMG+C +    L+ A  CF E+  L   Y  A  W Q++      +AG+
Sbjct:   57 RALEMQTPPRCQLEDFTPFARCHLWKLMMSFYDRQGVESWAQGIVPHFITSNTFIAKRYSNVLRAYFRDAMKPRS----GSPVDPSQ-PFYIVELGAGSGKFSFYLLKALAQMESVLDFPLSN-------------------------IRYIMTDFTEQNFNFWKTHPALAPFVKRGIVDFAIFDA------------TT--DTE---------------------------------LRLYSSGRVIRPGDLANPLCLIANYLFDTLYHDLFQVSEGVLKEGL--VSVGSKRAEEPDPLDPEIIKRLSNNFK--YEQIDETYYGEAK--PHCNNILKWYHEYFDPASSGATILVPIGALTAIERLAALSKNG-LVALSGDKGNNNPDHFRGVSDPHIAVHGSFSVMVNYHAIGVYFASRGGFALHSPQEEASLKVSAFVLPANAVGECEAASSTMTELYGDRLDKTCEKRSLQFPNLSTAFEDEIVSFGPNDFFVMQKSTKEDAKAPSLKAVLALMKLSGWDPDVFYKFRD-VLLDQSPTAAAKLKQDVMYGIPLVWKNYYALDKEKDVAFEIGRLYYGLHEYDSALAFYTLSSQEMGKHHVTSHNMGLCHYSKKQLELAASCFEEAYGLNHSYQKAATWLQRVRKELGIVAGD 626
[Close]
BLAST of mRNA_Ecto-sp9_F_contig1029.299.1 vs.
Match: Type (II protein arginine methyltransferase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X9K0_9STRA)

HSP 1 Score: 325 bits (834), Expect = 1.510e-94
Identity = 213/647 (32.92%), Postives = 313/647 (48.38%), Query Frame = 2 
Query:   59 EPAARSVIDDKKRFSETALWKLQREFYEKSEVKCWQECVVPNFVTSNCFIAQAYAHSIASFLRDHLGRRDKIPDGSEWGSSQKPVYIVEVGAGSAKLSYVLLQKLLKLSEYLPRPRGNAASDDAASADGDNNTATATGGRGFCFKYVITDFSHANFGFWMNHPRLQELFTLGVVDFAVFDAEARPGEVGGGKGTTKGDSESEXXXXXXXXXXXXXXXXXXXXXGNAGLWGSGSLRLELSGEELRPGDLDNPVIVVANYVFDSLKQDAFRVHGGVLEELLCTTSIPSSGDVDPSSLAPELLRYMRCSWSPVRRRPAECYPDDARLAKALETLAASHHE--------ASFLVPVGAVRAVDCLRALSKGGKALVIAGDKGYVHDSELEGTRDPHLAVHGSFSCMVNFKLLHLMCEAEGGSVLHS-QHLDGFKCSAMAYGLDPKA---------------------------YPQFRMAFKESTACFSPNGFSSFQRQLKDESRGLGLRPALALLRLSQHDPDVFYKFKQQVFIDKGPYAGEKLQNDIRRDVKLVHELYFPLQPSKDVAFEIGRIFMGLKDFDSAAELFRDSQRYCGVHHVSWYNMGVCFFYLHHLDQAEKCFSESLALCPDYPDAIKWRQKLADVKNFL 1891
            +P  R  ++D   F++  LWKL   FY++  V+ W + +VP+F+TSN FIA+ Y + + +++RD +      PD +      KP YIVE+GAGS K S+ LL+ L +++  L  P  N                          +Y++TDF+  NF FW  HP L      G+VDFA+FDA A              D+E                                 LRL  SG+ LR G+L+NP+ ++ANY+FD+L  D F+V GG L+E L   S+ S    +P  L PE+++ +   +     +  E Y  + R       +   +HE        A+ LVP+GA+ A++ L ALSK G  +V++GDKG  +     G  DPH+AVHGSFS MVN+  + +   + GG  LHS Q     K SA     D                              +P    AF +    F PN F   Q+  K++++   L+  LALL+LS  DPDVFYKF+  V +D+ P A  KL+ D++  + LV + Y+ L   KDVAFE+GR++ GL D+DSA   +  S    G HHV+ +NMG+C +    L+ A  CF E+  L   Y  A  W Q++    + L
Sbjct:   99 QPTPRCQLEDFTPFAKCHLWKLMMSFYDRQGVESWAQGIVPHFITSNTFIAKRYCNMLRAYVRDAMR-----PDAASPLDPTKPFYIVELGAGSGKFSFYLLKALTQVASVLDFPLDN-------------------------IRYIMTDFTEQNFNFWKTHPALAPFVARGIVDFAIFDATA--------------DTE---------------------------------LRLYSSGQVLRAGELENPLCLIANYLFDTLYHDLFQVEGGQLKEGL--VSVGSKRAEEPDPLDPEIIKRLSNVFK--YEQIDETYYGETR--PHCNNILKWYHEYFDPASSGATVLVPIGALTAIERLGALSKRG-LVVLSGDKGNNNPDHFRGVSDPHIAVHGSFSVMVNYHAIGVYFASRGGFALHSPQEEASLKVSAFVLPADAVGEQDATRLAMTELYGDSLDKVCETRSGRFPHLTTAFDDEIVSFGPNDFFVMQKTTKEDAKTPSLKAVLALLKLSCWDPDVFYKFRD-VLLDQAPSAAPKLKQDVKYGIPLVWKNYYALDKEKDVAFEVGRLYYGLHDYDSALAFYTLSAHEMGKHHVTSHNMGLCHYSKKQLELAATCFEEAYGLNQSYQKAATWLQRVRKELDVL 660
[Close]
BLAST of mRNA_Ecto-sp9_F_contig1029.299.1 vs.
Match: Type (II protein arginine methyltransferase n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J6B8_9STRA)

HSP 1 Score: 322 bits (826), Expect = 2.570e-94
Identity = 220/656 (33.54%), Postives = 316/656 (48.17%), Query Frame = 2 
Query:   59 EPAARSVIDDKKRFSETALWKLQREFYEKSEVKCWQECVVPNFVTSNCFIAQAYAHSIASFLRDHLGRRDKIPDGSEWGSSQKPVYIVEVGAGSAKLSYVLLQKLLKLSEYLPRPRGNAASDDAASADGDNNTATATGGRGFCFKYVITDFSHANFGFWMNHPRLQELFTLGVVDFAVFDAEARPGEVGGGKGTTKGDSESEXXXXXXXXXXXXXXXXXXXXXGNAGLWGSGSLRLELSGEELRPGDLDNPVIVVANYVFDSLKQDAFRVHGGVLEELLCTTSIPSSGDVDPSSLAPELLRYMRCSWSPVRRRPAECYPDDARLAKALETLAASHHE--------ASFLVPVGAVRAVDCLRALSKGGKALVIAGDKGYVHDSELEGTRDPHLAVHGSFSCMVNFKLLHLMCEAEGGSVLHS-QHLDGFKCSAMAY---------------------GLD------PKAYPQFRMAFKESTACFSPNGFSSFQRQLKDESRGLGLRPALALLRLSQHDPDVFYKFKQQVFIDKGPYAGEKLQNDIRRDVKLVHELYFPLQPSKDVAFEIGRIFMGLKDFDSAAELFRDSQRYCGVHHVSWYNMGVCFFYLHHLDQAEKCFSESLALCPDYPDAIKWRQKLADVKNFL---AGNEPQ 1909
            +P  R  ++D   F+   LWKL   FY++  V+ W + +VP+F+TSN FIA+ Y++++ ++ RD L      P         KP YIVE+GAGS K S+  L+ L ++   L  P  N                          +Y++TDF+  NF FW  HP L      G+VDFA+FDA            TT  D+E                                 LRL  SGE +RPG L NP+ V+ANY+FD+L  D F+V  GVL+E L   S+ S    +P  L PE+++ +   +     +  E Y  ++R       +   +HE        A+ LVP+GA+ A++ L ALS  G  +V++GDKG  +     G  DPH+AVHGSFS MVN+  + +   + GG  LHS Q     K SA                        GLD         YP    AF++  A F PN F   Q+  K++++   L+  LAL++LS  DPDVFYKF+  V +D+ P A  KL+ D+   + LV + Y+ L   KDVAFEIGR++ GL ++DSA   +  S +  G HHV+ +NMG+C +    L+ A  CF E+  L   Y  A  W Q++      +   AGN  Q
Sbjct:   19 KPPPRCQLEDFTPFARCHLWKLMMSFYDRQGVESWAQGIVPHFITSNTFIAKRYSNTLRAYFRDALRADSASPL-----DPSKPFYIVELGAGSGKFSFYFLKALAQMESVLDFPLTN-------------------------IRYIMTDFTEQNFNFWKTHPALAPFVKRGIVDFAIFDA------------TT--DTE---------------------------------LRLFSSGEAIRPGQLANPLCVIANYLFDTLYHDLFQVDDGVLKEGL--VSVGSKRVEEPDPLDPEIIKRLNNIFK--YEQIDETYYGESR--PHCNNILKWYHEYFDPASSGATILVPIGALTALERLSALSNRG-LVVLSGDKGNNNPDHFRGVTDPHIAVHGSFSVMVNYHAIGVYFASRGGFALHSPQEEASLKVSAFVLPANVASESLAASSTMLELYGDGLDRVCEKRSHQYPHLSTAFEDEIASFGPNDFFVMQKSTKEDAKAPSLKAVLALMKLSGWDPDVFYKFRD-VLLDQSPTAAAKLKQDVMYGIPLVWKNYYALDKEKDVAFEIGRLYYGLHEYDSALAFYTLSAQEMGRHHVTSHNMGLCHYSKKQLELASTCFEEAYTLNGSYQKASTWLQRVRKELGVIQADAGNAQQ 589
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1029.299.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized0.000e+095.55protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized5.990e-15997.87protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.860e-13346.39protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Hypothetical1.310e-12641.04protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486... [more]
Uncharacterized7.470e-11580.42protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Hypothetical2.350e-9833.49protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 ... [more]
Uncharacterized1.860e-9531.43protein n=1 Tax=Blastocystis hominis TaxID=12968 R... [more]
Type3.430e-9533.59II protein arginine methyltransferase n=1 Tax=Phyt... [more]
Type1.510e-9432.92II protein arginine methyltransferase n=2 Tax=Noth... [more]
Type2.570e-9433.54II protein arginine methyltransferase n=3 Tax=Phyt... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1029contigEcto-sp9_F_contig1029:13855..27410 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1016.1
Seed ortholog evalue6.8e-294
Seed eggNOG ortholog2880.D8LQH4
EggNOG OGs28JR9@1,2QS4P@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionTetratricopeptide TPR1
Ec32 orthologEc-10_005650.1
Exons15
Model size2985
Cds size1893
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928226.6364558-UTR-Ecto-sp9_F_contig1029:13854..148941622928226.6364558-UTR-Ecto-sp9_F_contig1029:13854..14894Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1029 13855..14894 -
1692277802.6865034-UTR-Ecto-sp9_F_contig1029:13854..148941692277802.6865034-UTR-Ecto-sp9_F_contig1029:13854..14894Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1029 13855..14894 -
1622928226.9446564-UTR-Ecto-sp9_F_contig1029:27358..274101622928226.9446564-UTR-Ecto-sp9_F_contig1029:27358..27410Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1029 27359..27410 -
1692277802.8443942-UTR-Ecto-sp9_F_contig1029:27358..274101692277802.8443942-UTR-Ecto-sp9_F_contig1029:27358..27410Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1029 27359..27410 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928226.6514847-CDS-Ecto-sp9_F_contig1029:14894..149571622928226.6514847-CDS-Ecto-sp9_F_contig1029:14894..14957Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1029 14895..14957 -
1692277802.7004635-CDS-Ecto-sp9_F_contig1029:14894..149571692277802.7004635-CDS-Ecto-sp9_F_contig1029:14894..14957Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1029 14895..14957 -
1622928226.6679442-CDS-Ecto-sp9_F_contig1029:15489..155761622928226.6679442-CDS-Ecto-sp9_F_contig1029:15489..15576Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1029 15490..15576 -
1692277802.713392-CDS-Ecto-sp9_F_contig1029:15489..155761692277802.713392-CDS-Ecto-sp9_F_contig1029:15489..15576Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1029 15490..15576 -
1622928226.6816082-CDS-Ecto-sp9_F_contig1029:16206..162911622928226.6816082-CDS-Ecto-sp9_F_contig1029:16206..16291Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1029 16207..16291 -
1692277802.7236166-CDS-Ecto-sp9_F_contig1029:16206..162911692277802.7236166-CDS-Ecto-sp9_F_contig1029:16206..16291Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1029 16207..16291 -
1622928226.6935353-CDS-Ecto-sp9_F_contig1029:16721..168441622928226.6935353-CDS-Ecto-sp9_F_contig1029:16721..16844Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1029 16722..16844 -
1692277802.7326877-CDS-Ecto-sp9_F_contig1029:16721..168441692277802.7326877-CDS-Ecto-sp9_F_contig1029:16721..16844Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1029 16722..16844 -
1622928226.7566755-CDS-Ecto-sp9_F_contig1029:17925..179811622928226.7566755-CDS-Ecto-sp9_F_contig1029:17925..17981Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1029 17926..17981 -
1692277802.7436554-CDS-Ecto-sp9_F_contig1029:17925..179811692277802.7436554-CDS-Ecto-sp9_F_contig1029:17925..17981Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1029 17926..17981 -
1622928226.7725122-CDS-Ecto-sp9_F_contig1029:18461..186381622928226.7725122-CDS-Ecto-sp9_F_contig1029:18461..18638Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1029 18462..18638 -
1692277802.7526753-CDS-Ecto-sp9_F_contig1029:18461..186381692277802.7526753-CDS-Ecto-sp9_F_contig1029:18461..18638Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1029 18462..18638 -
1622928226.7835398-CDS-Ecto-sp9_F_contig1029:19215..193291622928226.7835398-CDS-Ecto-sp9_F_contig1029:19215..19329Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1029 19216..19329 -
1692277802.76434-CDS-Ecto-sp9_F_contig1029:19215..193291692277802.76434-CDS-Ecto-sp9_F_contig1029:19215..19329Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1029 19216..19329 -
1622928226.7988691-CDS-Ecto-sp9_F_contig1029:19954..200271622928226.7988691-CDS-Ecto-sp9_F_contig1029:19954..20027Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1029 19955..20027 -
1692277802.771915-CDS-Ecto-sp9_F_contig1029:19954..200271692277802.771915-CDS-Ecto-sp9_F_contig1029:19954..20027Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1029 19955..20027 -
1622928226.8102252-CDS-Ecto-sp9_F_contig1029:20355..205321622928226.8102252-CDS-Ecto-sp9_F_contig1029:20355..20532Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1029 20356..20532 -
1692277802.779543-CDS-Ecto-sp9_F_contig1029:20355..205321692277802.779543-CDS-Ecto-sp9_F_contig1029:20355..20532Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1029 20356..20532 -
1622928226.822894-CDS-Ecto-sp9_F_contig1029:22748..228741622928226.822894-CDS-Ecto-sp9_F_contig1029:22748..22874Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1029 22749..22874 -
1692277802.787472-CDS-Ecto-sp9_F_contig1029:22748..228741692277802.787472-CDS-Ecto-sp9_F_contig1029:22748..22874Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1029 22749..22874 -
1622928226.8365083-CDS-Ecto-sp9_F_contig1029:23591..241261622928226.8365083-CDS-Ecto-sp9_F_contig1029:23591..24126Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1029 23592..24126 -
1692277802.799155-CDS-Ecto-sp9_F_contig1029:23591..241261692277802.799155-CDS-Ecto-sp9_F_contig1029:23591..24126Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1029 23592..24126 -
1622928226.8839052-CDS-Ecto-sp9_F_contig1029:24413..244661622928226.8839052-CDS-Ecto-sp9_F_contig1029:24413..24466Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1029 24414..24466 -
1692277802.8116176-CDS-Ecto-sp9_F_contig1029:24413..244661692277802.8116176-CDS-Ecto-sp9_F_contig1029:24413..24466Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1029 24414..24466 -
1622928226.8982296-CDS-Ecto-sp9_F_contig1029:24969..250941622928226.8982296-CDS-Ecto-sp9_F_contig1029:24969..25094Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1029 24970..25094 -
1692277802.8201716-CDS-Ecto-sp9_F_contig1029:24969..250941692277802.8201716-CDS-Ecto-sp9_F_contig1029:24969..25094Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1029 24970..25094 -
1622928226.9120615-CDS-Ecto-sp9_F_contig1029:25861..259161622928226.9120615-CDS-Ecto-sp9_F_contig1029:25861..25916Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1029 25862..25916 -
1692277802.8283365-CDS-Ecto-sp9_F_contig1029:25861..259161692277802.8283365-CDS-Ecto-sp9_F_contig1029:25861..25916Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1029 25862..25916 -
1622928226.9255857-CDS-Ecto-sp9_F_contig1029:27314..273581622928226.9255857-CDS-Ecto-sp9_F_contig1029:27314..27358Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1029 27315..27358 -
1692277802.8363361-CDS-Ecto-sp9_F_contig1029:27314..273581692277802.8363361-CDS-Ecto-sp9_F_contig1029:27314..27358Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1029 27315..27358 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1029.299.1prot_Ecto-sp9_F_contig1029.299.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig1029 14895..27358 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig1029.299.1

>prot_Ecto-sp9_F_contig1029.299.1 ID=prot_Ecto-sp9_F_contig1029.299.1|Name=mRNA_Ecto-sp9_F_contig1029.299.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=631bp
MTEPAARSVIDDKKRFSETALWKLQREFYEKSEVKCWQECVVPNFVTSNC
FIAQAYAHSIASFLRDHLGRRDKIPDGSEWGSSQKPVYIVEVGAGSAKLS
YVLLQKLLKLSEYLPRPRGNAASDDAASADGDNNTATATGGRGFCFKYVI
TDFSHANFGFWMNHPRLQELFTLGVVDFAVFDAEARPGEVGGGKGTTKGD
SESEPPPPPPEEGSDPAASGSYGGGGNAGLWGSGSLRLELSGEELRPGDL
DNPVIVVANYVFDSLKQDAFRVHGGVLEELLCTTSIPSSGDVDPSSLAPE
LLRYMRCSWSPVRRRPAECYPDDARLAKALETLAASHHEASFLVPVGAVR
AVDCLRALSKGGKALVIAGDKGYVHDSELEGTRDPHLAVHGSFSCMVNFK
LLHLMCEAEGGSVLHSQHLDGFKCSAMAYGLDPKAYPQFRMAFKESTACF
SPNGFSSFQRQLKDESRGLGLRPALALLRLSQHDPDVFYKFKQQVFIDKG
PYAGEKLQNDIRRDVKLVHELYFPLQPSKDVAFEIGRIFMGLKDFDSAAE
LFRDSQRYCGVHHVSWYNMGVCFFYLHHLDQAEKCFSESLALCPDYPDAI
KWRQKLADVKNFLAGNEPQQPQEQQPQTTV*
back to top

mRNA from alignment at Ecto-sp9_F_contig1029:13855..27410-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig1029.299.1 ID=mRNA_Ecto-sp9_F_contig1029.299.1|Name=mRNA_Ecto-sp9_F_contig1029.299.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=13556bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1029:13855..27410- (Ectocarpus species9 EcSCA_722f female)
AGGAGCTGTGTGGAGAGCAGCAGACAGCAGTTGGGGAGTGAGAAGGGCTG
TGATGACCGAGCCGGCAGCTCGTTCGGTGATTGATGACAAGAAGAGGTGC
GGTTGCAAGTGCTCTCAGAGATAGATGTGTTCCAGTGATGTGCACAGCAG
TGATGTGTTGTTTCGGAAGTTGGTTCAGCGGTGTTCCTGCTGCTGCTGTG
GGTACTGTACGTCGCTGTTCCTTGACTTGTCGGAAACCAAAAGGGTAGGG
GTAGGTGGTGGCGGAAAGACACCGTTGGCTTTTGTTCTGCCATGTGTGTA
CGTTGAGCGGCATGCTAGCTGGCAGACAACACGGATGAAGACCCATGAGA
CCAAACACTGCTGCTGAATGAAGTATTTTGTTCCTGCTCACCCCTGGCGT
TCTTGTCGGAGTTGCTCTCAGGTGCTCGGCCACCTGTCGTGCCCTTCACC
GGGCGATGTTGTTTCAGATACTGGTCGCGAGCCAATACCGGTGTTTCTTC
TTTGGGCCCGTTCCACACGTGGAGTTTTCCACCGGACGTGCTACATAGCT
ACATACCTGCACATACCGCAGTATGACCGCAGTATGTTGCGTAAGATACC
ACACCCCCTTGACCGATTTTCAAACGTCGACTGCTCCATGCATACATGCA
CTCCATGACGAAAAGAATGCCTATGCCTAAATCGATTCCTAAATCAATTG
GGACCTTTCGAAGAGTTCCAACGCCGTCATTATCGGCATCGCCATTGTTG
TTGCTGCAGAGTAATCGAGCTTTGAACACCACTCTGGGTTGCTGCAGAGT
ACTCGAGCTTTGAAGATCACTGTGGGGTGTGGAGTATCCAATGCAATCAA
CGGGATGTATGTACCTACCTTGCGCGCCCGTAGCGTTTGTGCCACTTGAC
AGCTCACGGAGTCTGCAAAGGGTAGCGAAATAGCTGCTGTTGCAAACGTC
CCTAAAAAGGTGGATACATGGTTTGTCCTGTTTACGTAGCATGATAACTG
TGTGAAGGAGAGATGATGGAAGACATGAAGATTTTGCGGTCTTTTTTCAG
GAGAGACATTACAACGGAGTTGGCACAGGCTGGACTCGAACCAGCCATTT
CGCGACCACCGAGGCCGTCGCCTTTGTCGCGTGCCTCGCCTCTACCCTGC
AAAAACGCTGGCGCCGGGCGGCGCCCCCCCGCTCCCCGCCTCTCGCTCCC
CCACTCNNNNNNNNNNCCCTCTCTCCTCCACCGAGGGCGTCGCCTTTCTC
GCGTGCCTCGCCTCTACCCTGCAAACTCCCTCCCCCCGCCCCTGCCCCTC
TCTCTCTCTCTCTCTCTCTCTCTCTGTCTCCCTCTGTCTCCCTCCCTGTC
TCTCTCTCTGTCTCTCCCTCTTTCTCTGTCTGCCTGCCTGCCTGGCTGTC
TGTCTCTCTCCCTCTCTGTCTCTCTCGCTCTCGGGGTCTCTCTCTCTGTC
GCTCGTCCGTGTTCTCCTCCCTCTCCTTGCGTCTTACCTTGAAGGTTTTC
GGAGACGGCGTTGTGGAAACTCCAGCGGGAGTTCTACGAGAAGAGCGAGG
TGCGTACATCCGTAAACCGCACGTTCACACGAACGCACGAAGCAACCTCT
GTGACGCACGCCGTACGATTGCGTTGGCCACAAGAGCGCAGCCCAACTTG
CGTGATCCACCGCCGTGTCGATTGGCGTAGCTTTTGGGGAAACAAGACGA
CATCGCTAGATGTGTGTGTCAGACTGTTGGGAATGACATTTGCGCAGATA
GTTGTCGTACCAACCATACTGTGTCTTGTCAAATGGCGAGGAGGGGACGA
TTGCGGTTTTCCTCACAACACAGTCTACAACCAGGAAAGCAAGTTTTCGT
TAAGCCGACTACAGTATCGCAACCCAACGACCTGACGGTGCTGCATGCCC
TGACTTTGACGGACAGCAAGTCCGCACCGCGCCCTTGCTTCCCCGCGCGG
GGGGGTATGCTATCGACAACGGGGAAAACGGCGCCCCTGGTGCCAACCCG
TTGCCCCCCCATGCAAACCCCTGGCGTGGCGTGGCACAGAAGCCTTTCGC
GTCTGCCTAAAACGTTCCGTTTTCTCTGCGCGCGCGTGTAGTGCAGCGGT
TTCCCCCAAAAATCAGCATTCCTACGTTGTGCTCCCTCGAAGCCCCTGGT
AGTTACATGACATCTGCATCCTAACCCGTCACTATTTATACCATGGTATT
TCCACTACACGTGCACCGAGAGGTGCGTAGGCTGACTGGCGCCAGAATAA
ATTGGGACGACACCATATTTCGCTGGGCGGCACAATTCTGAGTTTTTTTC
TCGTTCGTGGCATTAGGTGAAGTGCTGGCAGGAGTGCGTGGTGCCCAACT
TCGTGACCTCCAACTGCTTCATTGCCCAGGCCTACGCGCACTCCATCGCG
AGTTTCCTCAGAGATCACCTTGGGAGGCGAGATAAAATTCCGTATTGTTG
CATTCTGCGGCGTGTTTCTGATGCTCTTGGCGTGGTTGGTCTCAGCCTTT
CCTTGGCTCGCGCTTGATCTGCCTTGGCTTTTGAGCCCGCGTTTTTTTCC
GCTGACGTGCGTGAGCTACATGATGCGTCTGTTGATTGGGAGAGTTTGTA
CTGCCGACAGTTTGAGTGTAGCGTCGGCCTGGTTTCTCGAGAATGCCACG
GGGACGGTTGGCTTGTTTACCGGGCGGCTGTATGCTCTCGACCTATTCTG
AAGAACGTATCAGAGAGCAACGCTTGGTGACACGCATTTGACCCGTAGAT
GTCCGCGCCCCTGCAGCGGCTGTTGTTGGTATGTGATGGAATTACTCTTG
TGAGTTCACAGCATTGGCCGTGAAGTACAATATAGGTTTCCAAGTACCAG
CTTGAAGCTATCTAACACGCTGTGACCACGTTTGATCCAAAACCCTTTAC
AGCACCTTCGTTGCCTTTGTGCTACTGTGTTTCGTTTCGCACAGGGATGG
GTCGGAGTGGGGGAGCAGCCAGAAGCCGGTATACATTGTGGAGGTTGGTG
AGTTATGGGTGTGTCGGCGCTGGGGCCCGCCCGCGCCACTCATGGTCTGC
CCTACTCGTCCGTTTTGATCCGAAGTACCGTTGTACTGCTTACATGTGAT
AGCACTCAAACTAAGTTTTTCCAGCACTGCTGCACCATTTTGATGCACTC
AGACTGAGTTTGCTTGCACTGCTGCAGCTCGAATTTCGGCACTCTTGTGT
ACCCTCCGGATTCGATCGGTTCATTCTTGAACGCTGAATGCTGTGTGAAT
CGATCGATTGGTACAACGATCCTGCCTACCCCAGGCGCCGGATCAGCCAA
GCTCAGCTACGTGCTGCTCCAAAAACTGCTGAAGCTGTCGGAGTATCTCC
CCCGGCCGAGAGGAAACGCCGCATCCGATGACGCTGCTTCTGCCGATGGT
GACAACAACACCGCTACCGCTACCGGAGGAAGAGGGTTCTGCTTCAAGTA
CGTCATCACGGACTTCTCGCACGCGAACTTCGGCTTCTGGATGAACCACC
CGCGGCTGCAGGAGCTGTTCACGCTGGGTGTCGTAGATTTCGCCGTCTTC
GACGCGGAGGCTAGGCCGGGGGAAGTAGGCGGAGGAAAAGGGACCACCAA
GGGGGACTCTGAAAGCGAGCCGCCGCCGCCGCCGCCGGAAGAGGGCTCAG
ATCCTGCGGCGTCTGGGAGTTATGGTGGGGGGGGAAACGCCGGGCTGTGG
GGATCGGGGAGCCTACGGCTGGAGCTGTCTGGGGAGGAACTGAGACCGGG
GGACCTGGATAACCCTGTTATTGTGGTGGCGAATTATGTGTTCGACTCGC
TGAAGCAGGATGCCTTCAGGTGTGTAAAGTAGTTTCAGCTGTTCGTTTTG
GGGGTAGAGCTTGTAGGTGGAAAGCCATGTTTTGGGTTGGTTCCCATGTT
AAAATTGTCGCTTTGCTCTGGGGTAGAGCTGGGTTACCGGAAAGCTTTGG
CGGATGTTGAGTCGATGAACGGCTCAACATCCTTACTACCGTTAACAACA
CATACATTTTGTATGCTCCATATGGGTGCTAGTTTAAGATGTCCACAAGG
GTGGACGCAAAATCTCCAAACGCGTTGTCGTGGGGGTAGCATAAATTAAT
CAGCATGCCTGGCGAAATCGCATCTTGCCTGGTACAGTAGTACGCGGTGG
AAATCAATTCCAAGGTTCTATTGCCTGTTTTTATCCGTTTGATTTCTAGA
AGTTCGTTTTGGGTAGTGGGCCTGTGAGCATCGAAGGCGCCCGGGTGAGT
TTGACGAGTTCGGATACTACAATAGCAGGTACTGAGTAGAGACTGGATAA
TGTGAAGACAACAACAACATTCCATTGGGGCATGGCACGCGCTCTAGGTC
GTCCTCGAGACTCAGAGTAGTGTTACATCGTGGACACGCGCTCGTCGCGA
GAGTGCGGTCGAACCCCCGCACTTCGAGCATGTCCTTGACTCGAACTGTA
GCCACCACCAACATGGCGACCGACCGACCGACCGACCGACCGACCGTCCT
TCACGCGAAAAACGACGGAAACACGCCGCCGCACAGGGTACATGGCGGGG
TGCTGGAAGAGTTGCTGTGCACGACGAGCATCCCTTCCAGCGGGGACGTT
GACCCCTCCTCGCTAGCACCGGAGCTGCTGCGCTACATGAGGTGTTCCTG
GAGCCCTGTCAGGTGAGGTCGTCGTGCAGAGAAGCCTAGGCGGTCTGTGT
TGTTCCATGCTGAGGGGGGGGTTGTCCAGCAGTGCCTCGCATAAGCGCTA
CTGCTATTGGTGTTTCGCAAGCCGCCCGGTAAGGTCGGTGGTAAACATTT
TTTCTCGCCACTAGCCTATTATCCTGCTTGGACACAAATGTATCTGAACT
ACAAGGGGGTCTGGCGGCTTTTCGCCGCCCCGCTCAATAGATCGATTCCA
AGATACGCGATCAGATATGGTTGGATATGTCTGCCATACGTTTTTGTGTT
CACGACTATTAGGTAGGGGGCTCCGTGATGATACACGGGGACCCTCCGTG
CTTGGTGTGCTGCATGCAGCGGCACTCCCTCTTGACGATGGCCGTGGTTA
TAAAGTGAAATGCTTGGAGGCCCCTCTGAAGCTCATCTCTTGTGTAGCCC
AAGCTATACAGCTCCGAGCTAGGCCTGTTCGGGTCGCGGACTGGTGCATG
TCTCTCGGCGTTGCCGATAACTGCCCGTCCAGGCTTTACGGTTTTGGCGG
CTTGGATAAGCGCCTTTCTCCACACGAGTCGTACCCGTGGCCGCGGAGCC
AGACGCGACCGAGCCAGACGCGACCGAGCCAGACGCAGAACGAGAAGACG
TACGCATACATGAAGAGAGCGGAGTAACATAGGGGCGCCCGAAAGATCCT
GGAGATCCCGGAGAGACGGAAATGTGGCTCTGTGAGAGGCCGAGAGAGCC
GAAATTCACCGCTCTGAGAGGCCGAGACAAATCTCTGCTTGTCAGAGAGC
AAACGTTCTAAATGTTCAACTGTGGTCATATCTCGAATGGGTAGTCTTTC
TGTGTTGTATTTTTGTTTCCTAATAAAATGTAAAAAGGTCATATATCGAC
TGCTGCAGCCCACACAACACCAGGTGGGCGGTTTCACGATGTCGGGGCAG
GGGGGATGATACAATCGAATCACATACTGGGTGCTCTTGGAAGCTGCCCT
GTCAGATGAGGCTCTGTGATGTATGCGTGGTTTGACGGCGTCCAGAGACG
TGTGCAGTGTTCCAAGTCCGACCTGAAGCGTTGTACACACAGATCATTGC
CGACCAGCGGCCCTTCCCCAGCCTACTGATGGACACAGCAGTATCCACAA
CGCTCGAAAATGGGATCGTGTCAGCACCGAACTTTTTCTCTTGGGGGACA
CCTGGCCGCGTCATCAGAGCAGACAGCAGTTCGCCAGGTTTCTCTGTGGT
TTGCTGCGTGCAGGACAGGTACACGCATAGACTACTTTTGAGGCGGTGCT
GGTATATCGTCGTCCGGTACCGTTGTCGTACGGCGTTCCAGCTGTATGCA
GACAACACATCGGAAGCCCAGGTCATGAGATAGAGCTTTCCGGAGCCTTT
GCTGAGATAAGTTGTTGTACAGCGTTCCAGCTGCATACGACAACTTGTCT
TCAGCCAAGGTTCATGAAAGCTCTATCTCATGACCTGGGCTTCCGATGTG
TTGTCTGCATACAGCTGGAACGCTATACGACAATGGTGCCGGAAGACCAT
GTACCAACACCGCCTCACCAATATAGTCTATTGTCTGTCCTGCACGCAGC
ATACCAAAGAACAATCTGCCGAACTAGTGTCTGTCATTGTGACGCAGCGT
ATTAGCTGCCAGCCAGCCAGCCAGCCAGCCGGGCTAACAACGCGGGTGTC
TCAGTCAAAGCAGCTTCAAAGGGTGATCGCACACAGCGTGTAGATTATTT
TTGAGGCGGTGTTGGTATGTCGTCGTCCGGCACCGTTGTCGTACGGCGTT
CTAGCTGCATACAGACAACTTACCTTCTGCCCAGGTTCATGAAAGCTCTA
TCTCATGACATGACGGCTGATATCTCATAACCTGGGCCGAAGACATGCTC
TCTGGATACAGCTGGAACGCTCTATGACAACGGTGCCCGACGACCATATA
CCAACACCGCCTCACCAATACATCGTCTATACTCTGTCCTGCACGCAGCA
TAACAAAGAAGAGTCTGCCGAATTGCTGCCTGTGCTTTTGACGCAGCGTG
TTAGCATGCCAGCCAGCCCGACACTATCAACGCGGGAGTCTCAGTCAAAG
CAGCTCCAAAGATTACCACAACTACATAAAAAATGAAACACACCCATGAA
CACGCATCAGATCCGAGAACGAAGATATTTAGGGTCACACCATTCCACGC
ACCGTTTTCCTCGCGCGTCATGTCTAAGGCGACGTCCTGCCGAGTGCTAC
CCGGACGACGCACGCCTAGCCAAGGCCTTGGAAACCCTTGCGGCTTCACA
CCACGAGGCTTCCTTTCTCGTCCCGGTCGGAGCTGTCAGGGCGGTGGACT
GCCTGAGGGCCCTGTCGAAGGGTGGAAAGGCGTTGGTCATCGCCGGGGAT
AAGGGGTCAGTGCCACTATCCTTCCTTTCTGCACTTTTTTTTTGTGCGTG
TGCTGGTGTTCCTCAGGATTAAGTTATCCCAGCCCGTCGAAAAGTGTTGT
TTTGGCGCTGTTTTTTCCAGCCGTGTGAACCTAGATCTTTACCGTCAACT
TAATGGCGCCAGTCTGTTATACGACTACATGTATCAAGGTTTCTCTTGTG
GTTCACCCTGGCATTTCCCTGCCGTCATGCTGACACTCTGTAGCTTTGCC
CGGGGCTGTATCAACCTGTCTTAAAACCTCTTTCGGTGCTGCTGCACGGC
GTGCGACCTTCCCCGGCATTCCACGGAAAACAGGTACGTCCACGACAGCG
AGCTCGAGGGGACAAGGGATCCACACCTGGCCGTTCACGGGTCCTTCTCT
TGCATGGTAAGTTTTTTTATTCGGATTACTGCATATTTGTGATCTTTCGC
ATGACGAACGAAACCACTGCCGTGTTTTTTTTCGTTTATATGTATCTTTC
GGTCGCCCCGGTAGTCTAGTTGGTATCCTCGAAAACCTTTTAGTGGCCAG
GGTCAGGGGTTCGAATCCCGGTGTCAAACGAGCTTTTCTTGCAGAGTGAG
TTTTTTCTCTCGCTTGCGTTCCTGGCGTGGGTGGAAAGCGCTAGTTCGTG
TGTACACAGAGGGAAGAGAGTGCTGCATTCTTCTCGCATAAAAAATCAAA
GCACCCCAGGAGGGATGGGTAGGGGGCCTCTTCTGTGCGACTACGGGTTA
GAGTACACGGCACAAATGCTGTGAGCGCTGATTTGAAGTGAAGACGAAAA
AAAAAGAAAAACAGATCTTCCTCCACAATGCATCACTAAAACACCCCAAT
TTCGGTTGCATGCAGATACATACATCTCTGCTACCCCCTCGTTCTGGCCA
CACACCCTGAGGCACCGGTCTCCGCTTCCTCGAGTTCCTCGGGAGGCATA
TTTGTCGGTACGTTTATTTCGGTCGCGAATCTTGACCGCAACCACGGCCG
GCTGGCTGCGCGATTCTTTTGCTTGGTGCAGGTAAACTTCAAGTTGTTGC
ACCTCATGTGCGAAGCCGAGGGCGGTTCTGTGCTTCACTCACAGCACTTG
GACGGGTTCAAGTGTTCGGCTATGGCCTACGGACTCGACCCCAAGGTCAG
TTTCCGTGGTTTATTTTTCTGGTGTTCCATATTTTCATGGTAATTTTCCA
CGTCCGGACGGGCCTCACAGCAAGCCCAGACAAGCGCACGCCTATCTTTG
GCAGGACGCTGGCCATTGTGCCGTTTCGGGGTGTTCTTGGCTTGGCACGT
GTGTCGCCCGTGTGTTCGATACGACGTAGATGCGTTTTTGCGCGAAAACA
GCCCCTACCTCGTACCAGACGATGTAGTATACCTCGCTCCGCGGGTGAAA
TCTTCCCTAGCGCCAACGTCAAGAATTGCGTGTCTATGGTTAACAATGGC
CTGCGTAGCCGAGTCGTCGTGAGCTTCCCAATGCACATCCTGGTGTAGTT
CGATGTTGGCGCCGTGATTGCGGTTGATGTGGAAGGCTTGATGTTGACAA
GTGCATCCAGGCGTATGTGTGTCACGTCGCGTGAGAGGTATATGCGTACA
TGGTTCGGGTAAATACGTGTGTTGTTTCGGACTCGCAAGACCAAAGCCTT
GATTGATATCACTATCCGTTGAGCGCACGAATCGGTCTTTCTCTGTTTTC
CTCTAACAACTGCCGCTTCTAGGCCTACCCGCAGTTCCGGATGGCGTTCA
AGGAGAGCACGGCCTGCTTCAGCCCGAACGGCTTTTCGTCCTTCCAGAGG
CAGCTCAAGGATGAGTCGAGGGGACTAGGACTACGCCCCGCCCTTGCCCT
CTTGAGGCTGAGCCAACACGACCCCGACGTGTTCTACAAGTTCAAGCAGG
TAAACCAGAGCGCGTGTTTCTTGGCATGTGTACGCATTCGTATTTTGATC
CATTTTTTTGCACTTCGAGACCGGCGGAATCTAGCAGCCTAAGCAAACAA
CACAACCCCGAGGTGTGATTGGCAAGCTGAAGCTAGCTTTTGGTATCACT
GCTTTCAGTCAAGTAGATTCTTCTTTCATGTATTGAACGTTGGGAGGCTG
AGCAGTCAACACAACCCCGAGATCGGGCTTGACGAGTCCAAGCAAGCTGG
CGCGCGCAACACATTTCCGTTGCATTGGTGATAACACGAGCTCGTAGGAA
AGGTCCTCAGGACGTTCTCCGACCACCATCTCGATTCATTGTGGTGTAAA
ACGACAAGACCTTTTCGTTCCCGTTTGATCCTCAACTTTATTAGATACGG
GAGTATCGATATCCCCTGCTGATTTCGTCTCTGTGTGCGCTGTTGGCCAT
GTACATCTATGTCTGCTGTGCCGCCTGAGCAGGTGTTCATCGACAAGGGG
CCGTACGCGGGGGAGAAGCTCCAGAACGACATCCGGTAAGCATCGGTACT
TGGGCACGGAAGATATCATCCACCCGTTATGTAACGCAGGTGACGCAAGA
TATCACACCCCCTGGACCGGTTTTCAAAGGTTGATTTCTCCACAGCAGAA
GGAGTGGCGGTGCCGAAAATGGCGGCGTTGAAGTCGTCTCATCTAGCGAT
AGATTTCCGAAATCGTGCCGTGTCATCTATGCATATCCTCTTCGTCGAAG
AGACAGCTGTACGCTGTAGTCGACAAACATTCATTTTGGTAAAGTGTGGG
ACAGGGGGGATGATGCTGCTGTAGTCGAATGTAGTGTATGGACGTGTAGT
TCAGTTTTGGGCACGCAAACGTGCTGCAGGGATGTATAGGTGTACCTCTT
CGGGCTTGTGTACCCTTTTCTTGCTAGTTTGCGTGTTCTTTAGATCTTCT
GATGCCTCTAGCATTCTTGTGACCACGGACCGCGTCTTTGCTAGATTTTG
GGATTAGCAACTGACACGAGTTTAATGTGAAGACAACAACAACAACAACA
ACAACAACAACAACAATCAAGATCGGTCTACGCGGTGTGGTATCTTGTGT
CATGTACGCTCGATCCAGGGGCACCGCGTCTCTTGGTGCGTTGTGTGGAA
CCCCCAAGTGTTTTCACCGGGGTGTAGTGATCTATTATAGCATTCCACCA
GCGTAGGGCTATCTACATATTCGCTGGTCGTTGTCAGCGACTGAGTTGAG
GCAGCAAGCGATGGAAGGTATTGAGATTCGCAAGTGTATGTTTTTGGCAG
TGTCGGTTGCTAAAGTACCAACAATCGGATGTAAGCGGTACCGTTTTGCT
TGTTGATGTGAGTCATTCATTGGGCAGTGGAAGTCGTACTTGCAACACCG
GTATGAAGATTGTACCTGTGCCTGCGTGGTTTTGTAGTCGTGCGTGGGCG
TCGCGCCTATTGAGGTGTGCATGCCCCCGGCAGCTTTGCCACCTCACCGT
GTCTGCCCCTGTTTGAAGGCGACCGCTGCGCAGCGCTTAGTTTTTTCATT
GGTGTGCCCTTTCTTGGCTTGTTTTTTGTCCATGGGTTGTGTGCCGGGTG
TGTGTGCGTTGTCCAGGCGGGACGTGAAGCTGGTTCACGAGCTGTACTTT
CCCCTGCAGCCTTCCAAGGATGTCGCGTTCGAGATCGGGCGTATCTTCAT
GGGTCTCAAAGACTTCGACTCTGCTGCAGAGCTCTTCAGGTGCGTAAGCC
TTGTTGGAGGTAGGAACTGCCAACAACGCGCTGGGATCGCGTTTTGCAAA
GGAAATTTTCGTCTCTTGATCTTTTTCCCACGGAATAGCTTTTTGAGTAC
TGTGAATTGCTTAAGATTGCGTCTTGCACCGCTGTCAAGTTTTTCCAATG
ATGTTGTCGTCGACAATTAATGTTGAATCATGTATGCTCCTAGTAGTCTG
GCTCGCCTCGTCTTGTGTCCGTTCCCTACTACTCATCTTGGCCTTTCGAA
CAACAAAACATTTTTGCCGCCTTTTGAAAAGATTCTTGATACCTGAAACA
GGGGATGTGGCCGGTCGGCTTCATCTGTTGTATGAAGGAAGGACACCTTT
CAAATCGGTCGCCCGCATGCCCGTGTCTCGTGAACTGATGACCCTTGCCT
GGTGTTGATGTTTCGACAGAGATTCCCAGAGATATTGCGGCGTGCACCAC
GTGAGCTGGTACAACATGGGAGTCTGCTTCTTCTACCTCCACCATCTCGA
CCAGGTACTCAACCGCCAACAAGTTGTTTTTCAGCATGTTTTCGTGCTCG
TTTTCAGCATGGAGTGGAGGAAGGTCACGAGTGTTATTATTGCCGTCATC
TTCGTACAAGTCCGTCTGCCTTTTCGTTGGGTTGGTGACGTTTTTTTGCC
GTCACTCATGCGGTGTGCCAGCTCTACGGGGCTTTTCATCGCATCAATAG
CTCCAATCCGGGGTCACCCAGAAGATTTTCTGCGCACGCAGTAATGTTCG
AAGGCGAATAGGGTTCGGCTGTCCTTTCGTTCAGTGACTCGCAGACAACG
TTTTTCTCCAGCACTAGGTATGAAATGCTTTGCTGAGGTCGGAAAGCTTA
ACCTTGCCGTGTTGGAATTTTCCCATCAAGTGAAGGCTGAACTACTGAGC
CGATCGCCGGTTATCAGCGTTTTTTTCTTTCAAGGCACTGGGTTTCAAAC
GTGAAGGTCACAACCTGAGTGTTCGTTCGAACAACAGTGTCGATTGCCAC
AGGAAACACGTTTGGTTATTCTTTCCGTCGTCCTCCATCCTCCATTACGC
TTTAAAGACCAAACAAGCCCTTCGAGGCCTGGTGCACGACTCGTTCCTTC
GGTAAGATCGCAAACCTCTTCTTCGCTGCAACAGGCGGAGAAGTGCTTCT
CGGAAAGCCTGGCTCTTTGCCCAGACTACCCAGACGCGATTAAGTGGAGA
CAGAAACTCGCCGACGTGAAGGTACAGTACGACCAAGTTACCGTACGTCA
CGTAAGATAAGACACCCCCTGTAGCCATGTTCAAAGCTCCGTTTTTCTGA
TAACGATGCCGAAAATGGGGGCGTTGGGAACCGTTATCCCAACGCCCGTC
TTGTCGACATCTTTTTGACAATGCATGTTTTGAGTTTGTTGTCCTCTTGG
TCTGGAGTAGTCGAGCTTGTCTGTTTTCATAATCGAGATCGGTCGTTGTG
TCTTGCACATGTGTGTTCCGAAGCCTTGGGGAAATGCGACCTTCCTTCTG
TCCGAAGAATGTTACCAACAAGCCTGGGGCTAGAAATCCTTCCCCAGCCC
ACGAAACACACAACATATTCTCGCTCTCAGTAACCCCTAACCCTCGCTTA
ATTTCCGCCCTCCGGCTTGCTTGCCGCTGCTTGGTATTCTTTCTCTACGG
TTGCATTTCGTGGTCGACCCGCGTGGTTGATTAACGGCGACTGCCCTAAT
GGCGGGCGGCTGCCTGTGATGGTGTCATCAATGCGTACGTACACGGCACG
CAGAACTTTCTGGCGGGGAACGAGCCGCAACAACCCCAAGAGCAGCAGCC
TCAAACAACGGTATAGTGAGAGTCCACGGTGTACACAGCAGTGATGACAG
CTGAGCGGCATGGCAACACAGCAAATTTAATTGGGGCGATGAAAAGTGTC
TCGGGCTCTTGAAGCTTTGTCCCAGCTGGGGCTGCCCAGCCTTAGAGTCG
GCGTCAAGTATAGGCACGGGCCCCCTTTTGCATCCCCGACAGTGGACACG
TACGACTCGAAAAGGGGATCGCTTTCGTTTCATCGGGCAACGTGGAGCTC
AGTGCTTGGTGCCTTTCATTCGAAGCCATATGCGCTTGTTTTTCGTGTTG
CTTAGCTTCTCTCAATACCATGCTTCCAAGTATGTGATTGTGTTGTGAAC
AGGGCCGAGAACGGTAATTTGTACACCCTGGAGTGATAGGACGTGACCTT
GGGGACCTTGGGTCCTTTAATGATGCGTCTTCGGGAAAAGCCTAGGTCCT
CAAAGTAGCTTAAATCGAACCGCCTCTAAGTGATGAAGGTTTGAGCGTAC
ACAGGTTGTGGTAAATCGAAATAACTACTGTCCCGACCGTGCTGTTGGGC
GGTGGAGTAGAAGCGGGACTTGCTCTTTGTGTGTTTTGTGAATTCTTGAC
GGATTGGAATGTCCGCGGGTTCATCCGTGCGTTTGTTGTCGGAACGGAAA
GGTGCACGTTGTGTGGTAATTCGGGTAAAACGTACGCGAGCGATGTTTTT
GAGTGATGTAATGATTCTTGACGTGGCATCCGCGGACAGGGGGGTGGTAG
GTGGCGCATGCCGTTTGTTTCCGAAGCTGAGCGGTCCTTGTGAATGGCAT
GGGATGTTTTATGAAAACGTGAGTTGGATTCCGTTTCAGGAAGTAGGTGG
ACACCGATCGTGTAGCCCTGGTTACTCTTCATCGGCGTTGGCATTGTCAT
GCAGGAAACAGAGGAGATGACAACTGGAACTGAGTGCACATTGCTTTTTG
CTGTCAAGATTCCCAAGAATTCCAATCGAACACTTGCATTGAAATAGAGT
GCACTCAGTGTGTTTTGTCACCACCGGTTGGAATTCTTTCTTCCTTTCAT
TGGGGA
back to top

Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1029:13855..27410-

>mRNA_Ecto-sp9_F_contig1029.299.1 ID=mRNA_Ecto-sp9_F_contig1029.299.1|Name=mRNA_Ecto-sp9_F_contig1029.299.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=3786bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1029:13855..27410- (Ectocarpus species9 EcSCA_722f female)
ATGACCGAGCCGGCAGCTCGTTCGGTGATTGATGACAAGAAGAGATGACC
GAGCCGGCAGCTCGTTCGGTGATTGATGACAAGAAGAGGTTTTCGGAGAC
GGCGTTGTGGAAACTCCAGCGGGAGTTCTACGAGAAGAGCGAGGTTTTCG
GAGACGGCGTTGTGGAAACTCCAGCGGGAGTTCTACGAGAAGAGCGAGGT
GAAGTGCTGGCAGGAGTGCGTGGTGCCCAACTTCGTGACCTCCAACTGCT
TCATTGCCCAGGCCTACGCGCACTCCATCGCGAGTTTCCTCAGAGATCAC
CTTGGGAGGCGAGATAAAATTCCGTGAAGTGCTGGCAGGAGTGCGTGGTG
CCCAACTTCGTGACCTCCAACTGCTTCATTGCCCAGGCCTACGCGCACTC
CATCGCGAGTTTCCTCAGAGATCACCTTGGGAGGCGAGATAAAATTCCGG
ATGGGTCGGAGTGGGGGAGCAGCCAGAAGCCGGTATACATTGTGGAGGTT
GGGATGGGTCGGAGTGGGGGAGCAGCCAGAAGCCGGTATACATTGTGGAG
GTTGGCGCCGGATCAGCCAAGCTCAGCTACGTGCTGCTCCAAAAACTGCT
GAAGCTGTCGGAGTATCTCCCCCGGCCGAGAGGAAACGCCGCATCCGATG
ACGCTGCTTCTGCCGATGGTGACAACAACACCGCTACCGCTACCGGAGGA
AGAGGGTTCTGCTTCAAGTACGTCATCACGGACTTCTCGCACGCGAACTT
CGGCTTCTGGATGAACCACCCGCGGCTGCAGGAGCTGTTCACGCTGGGTG
TCGTAGATTTCGCCGTCTTCGACGCGGAGGCTAGGCCGGGGGAAGTAGGC
GGAGGAAAAGGGACCACCAAGGGGGACTCTGAAAGCGAGCCGCCGCCGCC
GCCGCCGGAAGAGGGCTCAGATCCTGCGGCGTCTGGGAGTTATGGTGGGG
GGGGAAACGCCGGGCTGTGGGGATCGGGGAGCCTACGGCTGGAGCTGTCT
GGGGAGGAACTGAGACCGGGGGACCTGGATAACCCTGTTATTGTGGTGGC
GAATTATGTGTTCGACTCGCTGAAGCAGGATGCCTTCAGGCGCCGGATCA
GCCAAGCTCAGCTACGTGCTGCTCCAAAAACTGCTGAAGCTGTCGGAGTA
TCTCCCCCGGCCGAGAGGAAACGCCGCATCCGATGACGCTGCTTCTGCCG
ATGGTGACAACAACACCGCTACCGCTACCGGAGGAAGAGGGTTCTGCTTC
AAGTACGTCATCACGGACTTCTCGCACGCGAACTTCGGCTTCTGGATGAA
CCACCCGCGGCTGCAGGAGCTGTTCACGCTGGGTGTCGTAGATTTCGCCG
TCTTCGACGCGGAGGCTAGGCCGGGGGAAGTAGGCGGAGGAAAAGGGACC
ACCAAGGGGGACTCTGAAAGCGAGCCGCCGCCGCCGCCGCCGGAAGAGGG
CTCAGATCCTGCGGCGTCTGGGAGTTATGGTGGGGGGGGAAACGCCGGGC
TGTGGGGATCGGGGAGCCTACGGCTGGAGCTGTCTGGGGAGGAACTGAGA
CCGGGGGACCTGGATAACCCTGTTATTGTGGTGGCGAATTATGTGTTCGA
CTCGCTGAAGCAGGATGCCTTCAGGGTACATGGCGGGGTGCTGGAAGAGT
TGCTGTGCACGACGAGCATCCCTTCCAGCGGGGACGTTGACCCCTCCTCG
CTAGCACCGGAGCTGCTGCGCTACATGAGGTGTTCCTGGAGCCCTGTCAG
GGTACATGGCGGGGTGCTGGAAGAGTTGCTGTGCACGACGAGCATCCCTT
CCAGCGGGGACGTTGACCCCTCCTCGCTAGCACCGGAGCTGCTGCGCTAC
ATGAGGTGTTCCTGGAGCCCTGTCAGGCGACGTCCTGCCGAGTGCTACCC
GGACGACGCACGCCTAGCCAAGGCCTTGGAAACCCTTGCGGCTTCACACC
ACGAGGCTTCCTTTCTCGTCCCGGTCGGAGCTGTCAGGGCGGTGGACTGC
CTGAGGGCCCTGTCGAAGGGTGGAAAGGCGTTGGTCATCGCCGGGGATAA
GGGGCGACGTCCTGCCGAGTGCTACCCGGACGACGCACGCCTAGCCAAGG
CCTTGGAAACCCTTGCGGCTTCACACCACGAGGCTTCCTTTCTCGTCCCG
GTCGGAGCTGTCAGGGCGGTGGACTGCCTGAGGGCCCTGTCGAAGGGTGG
AAAGGCGTTGGTCATCGCCGGGGATAAGGGGTACGTCCACGACAGCGAGC
TCGAGGGGACAAGGGATCCACACCTGGCCGTTCACGGGTCCTTCTCTTGC
ATGGTACGTCCACGACAGCGAGCTCGAGGGGACAAGGGATCCACACCTGG
CCGTTCACGGGTCCTTCTCTTGCATGGTAAACTTCAAGTTGTTGCACCTC
ATGTGCGAAGCCGAGGGCGGTTCTGTGCTTCACTCACAGCACTTGGACGG
GTTCAAGTGTTCGGCTATGGCCTACGGACTCGACCCCAAGGTAAACTTCA
AGTTGTTGCACCTCATGTGCGAAGCCGAGGGCGGTTCTGTGCTTCACTCA
CAGCACTTGGACGGGTTCAAGTGTTCGGCTATGGCCTACGGACTCGACCC
CAAGGCCTACCCGCAGTTCCGGATGGCGTTCAAGGAGAGCACGGCCTGCT
TCAGCCCGAACGGCTTTTCGTCCTTCCAGAGGCAGCTCAAGGATGAGTCG
AGGGGACTAGGACTACGCCCCGCCCTTGCCCTCTTGAGGCTGAGCCAACA
CGACCCCGACGTGTTCTACAAGTTCAAGCAGGCCTACCCGCAGTTCCGGA
TGGCGTTCAAGGAGAGCACGGCCTGCTTCAGCCCGAACGGCTTTTCGTCC
TTCCAGAGGCAGCTCAAGGATGAGTCGAGGGGACTAGGACTACGCCCCGC
CCTTGCCCTCTTGAGGCTGAGCCAACACGACCCCGACGTGTTCTACAAGT
TCAAGCAGCAGGTGTTCATCGACAAGGGGCCGTACGCGGGGGAGAAGCTC
CAGAACGACATCCGCAGGTGTTCATCGACAAGGGGCCGTACGCGGGGGAG
AAGCTCCAGAACGACATCCGGCGGGACGTGAAGCTGGTTCACGAGCTGTA
CTTTCCCCTGCAGCCTTCCAAGGATGTCGCGTTCGAGATCGGGCGTATCT
TCATGGGTCTCAAAGACTTCGACTCTGCTGCAGAGCTCTTCAGGCGGGAC
GTGAAGCTGGTTCACGAGCTGTACTTTCCCCTGCAGCCTTCCAAGGATGT
CGCGTTCGAGATCGGGCGTATCTTCATGGGTCTCAAAGACTTCGACTCTG
CTGCAGAGCTCTTCAGAGATTCCCAGAGATATTGCGGCGTGCACCACGTG
AGCTGGTACAACATGGGAGTCTGCTTCTTCTACCTCCACCATCTCGACCA
GAGATTCCCAGAGATATTGCGGCGTGCACCACGTGAGCTGGTACAACATG
GGAGTCTGCTTCTTCTACCTCCACCATCTCGACCAGGCGGAGAAGTGCTT
CTCGGAAAGCCTGGCTCTTTGCCCAGACTACCCAGACGCGATTAAGTGGA
GACAGAAACTCGCCGACGTGAAGGCGGAGAAGTGCTTCTCGGAAAGCCTG
GCTCTTTGCCCAGACTACCCAGACGCGATTAAGTGGAGACAGAAACTCGC
CGACGTGAAGAACTTTCTGGCGGGGAACGAGCCGCAACAACCCCAAGAGC
AGCAGCCTCAAACAACGGTATAGAACTTTCTGGCGGGGAACGAGCCGCAA
CAACCCCAAGAGCAGCAGCCTCAAACAACGGTATAG
back to top