mRNA_Ecto-sp9_F_contig1028.291.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig1028.291.1 vs.
Match: PH (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJR4_ECTSI) HSP 1 Score: 296 bits (759), Expect = 5.730e-102 Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 1
Query: 1 MATTMARPPFHDQKTGVRYDCNNPDHAGWLRKESVWLKDWRPRFFVLKGSNLFFAKSEYETPHGRIDLSSCMTVKSAEQKTSKRNALEVSTHETTYFMYANTEKEKDDWIGAIGRAIVQASSTYQGDNNNGDSDSDDEYDYR 426
MATTMARPPFHDQKTGVRYDCNNPDHAGWLRKESVWLKDWRPRFFVLKGSNLFFAKSEYETPHGRIDLSSCMTVKSAEQKTSKRNALEVSTHETTYFMYANTEKEKDDWIGAIGRAIVQASSTYQGDNNNGDSDSDDEYDYR
Sbjct: 1 MATTMARPPFHDQKTGVRYDCNNPDHAGWLRKESVWLKDWRPRFFVLKGSNLFFAKSEYETPHGRIDLSSCMTVKSAEQKTSKRNALEVSTHETTYFMYANTEKEKDDWIGAIGRAIVQASSTYQGDNNNGDSDSDDEYDYR 142
BLAST of mRNA_Ecto-sp9_F_contig1028.291.1 vs.
Match: PH (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE28_9STRA) HSP 1 Score: 207 bits (527), Expect = 1.260e-66 Identity = 100/135 (74.07%), Postives = 112/135 (82.96%), Query Frame = 1
Query: 13 MARPPFHDQKTGVRYDCNNPDHAGWLRKESVWLKDWRPRFFVLKGSNLFFAKSEYETPHGRIDLSSCMTVKSAEQKTSKRNALEVSTHETTYFMYANTEKEKDDWIGAIGRAIVQASSTYQGDNNNGDSDSDDEY 417
+ RP + D TG+ YDCNNPD G+L K+S WLKDWR RFF+LKGS LFFAKSE PHG IDLSSCMTVKSAEQKT KRNALEVST +TT+FM+A TEKEKDDWIGAIGRAIVQ+SSTYQ + +GDSDSD EY
Sbjct: 4 VIRPQYQDPATGILYDCNNPDFTGYLTKQSSWLKDWRRRFFILKGSKLFFAKSEMAAPHGMIDLSSCMTVKSAEQKTHKRNALEVSTQDTTFFMFAGTEKEKDDWIGAIGRAIVQSSSTYQNEEASGDSDSDYEY 138
BLAST of mRNA_Ecto-sp9_F_contig1028.291.1 vs.
Match: Pleckstrin (like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJA6_9STRA) HSP 1 Score: 176 bits (446), Expect = 2.540e-54 Identity = 86/135 (63.70%), Postives = 103/135 (76.30%), Query Frame = 1
Query: 19 RPPFHDQKTGVRYDCNNPDHAGWLRKESVWLKDWRPRFFVLKGSNLFFAKSEYETPHGRIDLSSCMTVKSAEQKTSKRNALEVSTHETTYFMYANTEKEKDDWIGAIGRAIVQASSTYQGDNNNGDSDSDDEYDY 423
R + D +T +RYD NN D GWL K+S WLK+WR R+F+LKGS LFFAK+E +PHG IDLSSCMTVKSAE K KRNALEVST ETT+ MYA+TEKEKDDWIGA+GRAIV++S+TY + + DD DY
Sbjct: 2 RGTYMDPETNIRYDTNNADFEGWLTKQSSWLKEWRRRYFILKGSKLFFAKNEMCSPHGMIDLSSCMTVKSAELKAQKRNALEVSTPETTFLMYADTEKEKDDWIGAVGRAIVRSSTTYTQEVGEAGDEDDDGSDY 136
BLAST of mRNA_Ecto-sp9_F_contig1028.291.1 vs.
Match: Hypothetical (protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A403_TRICV) HSP 1 Score: 176 bits (447), Expect = 3.150e-53 Identity = 80/127 (62.99%), Postives = 100/127 (78.74%), Query Frame = 1
Query: 13 MARPPFHDQKTGVRYDCNNPDHAGWLRKESVWLKDWRPRFFVLKGSNLFFAKSEYETPHGRIDLSSCMTVKSAEQKTSKRNALEVSTHETTYFMYANTEKEKDDWIGAIGRAIVQASSTYQGDNNNG 393
+ARPPF D T + YDC++P++ GWL K+S+WLKDWR R+F+LKGS LFF KS + TPHG IDL+ C TVKSA+ K+ KRN+ EVST E TY +YA+TEKEKDDWIG +GRAIV+ S TYQ D + G
Sbjct: 76 IARPPFVDPTTNICYDCSDPEYEGWLTKQSMWLKDWRRRYFLLKGSKLFFCKSPHSTPHGMIDLAKCTTVKSADLKSRKRNSFEVSTPELTYLLYADTEKEKDDWIGNVGRAIVRCSGTYQRDYSRG 202
BLAST of mRNA_Ecto-sp9_F_contig1028.291.1 vs.
Match: Hypothetical (protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZAF4_9STRA) HSP 1 Score: 174 bits (440), Expect = 1.750e-52 Identity = 79/131 (60.31%), Postives = 101/131 (77.10%), Query Frame = 1
Query: 1 MATTMARPPFHDQKTGVRYDCNNPDHAGWLRKESVWLKDWRPRFFVLKGSNLFFAKSEYETPHGRIDLSSCMTVKSAEQKTSKRNALEVSTHETTYFMYANTEKEKDDWIGAIGRAIVQASSTYQGDNNNG 393
MA + RPP+ D T + YD +NP++ GWL K+S+WLKDWR R+F+LKGS LFFAK + PHG IDL+ C TVKSA+ K+ KRN+ EVST E TY +YA++EKEKDDWIG +GRAIV+ SSTYQ D++ G
Sbjct: 38 MAGRLIRPPYVDPTTSICYDTDNPEYEGWLTKQSMWLKDWRRRYFILKGSKLFFAKLPHSAPHGMIDLAQCTTVKSADLKSHKRNSFEVSTPEVTYLLYADSEKEKDDWIGNVGRAIVRCSSTYQRDHSRG 168
BLAST of mRNA_Ecto-sp9_F_contig1028.291.1 vs.
Match: Hypothetical (protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LSC0_9STRA) HSP 1 Score: 172 bits (435), Expect = 2.410e-52 Identity = 76/126 (60.32%), Postives = 97/126 (76.98%), Query Frame = 1
Query: 1 MATTMARPPFHDQKTGVRYDCNNPDHAGWLRKESVWLKDWRPRFFVLKGSNLFFAKSEYETPHGRIDLSSCMTVKSAEQKTSKRNALEVSTHETTYFMYANTEKEKDDWIGAIGRAIVQASSTYQG 378
MA + RPP+ D T +R+D + + GWL K+S W+KDWR R+F+LKGS LFFAK+ PHG IDLS+C TVKSA+ KT K N+ E+STH+TT+F+YA+ EKEKDDWIG +GRAIV+ SSTYQG
Sbjct: 1 MANRIGRPPYFDPVTNIRFDTDCAEFEGWLTKQSAWVKDWRRRYFILKGSKLFFAKTGTSAPHGMIDLSTCTTVKSADVKTRKNNSFEISTHDTTFFLYADNEKEKDDWIGNVGRAIVRCSSTYQG 126
BLAST of mRNA_Ecto-sp9_F_contig1028.291.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AKD7_9STRA) HSP 1 Score: 171 bits (433), Expect = 3.430e-52 Identity = 81/137 (59.12%), Postives = 102/137 (74.45%), Query Frame = 1
Query: 1 MATTMARPPFHDQKTGVRYDCNNPDHAGWLRKESVWLKDWRPRFFVLKGSNLFFAKSEYETPHGRIDLSSCMTVKSAEQKTSKRNALEVSTHETTYFMYANTEKEKDDWIGAIGRAIVQASSTY-QGDNNNGDSDSD 408
MA R P+ + T +++ ++PD GWL K+S W+K+WR R+F+LKGS LFFAK E TPHG +DL+ CMTVKSAE K K+NALEVST +TT+ M+A+TEKEKDDWIGAIGRAIV+ SSTY + D D DSD
Sbjct: 13 MAAAQTRKPYINPSTNEKHETSDPDFQGWLTKQSTWIKEWRRRYFILKGSKLFFAKGEAATPHGMVDLAQCMTVKSAETKAGKKNALEVSTADTTFLMFADTEKEKDDWIGAIGRAIVRCSSTYTEEDGRENDDDSD 149
BLAST of mRNA_Ecto-sp9_F_contig1028.291.1 vs.
Match: Hypothetical (protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A7D4_9STRA) HSP 1 Score: 167 bits (423), Expect = 6.430e-51 Identity = 81/128 (63.28%), Postives = 99/128 (77.34%), Query Frame = 1
Query: 28 FHDQKTGVRYDCNNPDHAGWLRKESVWLKDWRPRFFVLKGSNLFFAKSEYETPHGRIDLSSCMTVKSAEQKTSKRNALEVSTHETTYFMYANTEKEKDDWIGAIGRAIVQASSTYQGDNN-NGDSDSD 408
+ D TG+RYD +NPDH+GWL K+S WL+DWR R F+LK S LFF+K E PHG IDL+ CMTVKSAE K +R+ALEVST +TTY M A+TEKEKDDWIGAIGRAIV+ S+T+ D+ +G SD D
Sbjct: 4 YTDPATGIRYDTSNPDHSGWLTKQSAWLRDWRRRHFILKQSKLFFSKHEGSPPHGMIDLARCMTVKSAEFKARRRHALEVSTQDTTYLMCADTEKEKDDWIGAIGRAIVRCSATFTNDDGMDGASDDD 131
BLAST of mRNA_Ecto-sp9_F_contig1028.291.1 vs.
Match: Hypothetical (protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R6Y3_9STRA) HSP 1 Score: 164 bits (415), Expect = 2.120e-49 Identity = 76/125 (60.80%), Postives = 96/125 (76.80%), Query Frame = 1
Query: 13 MARPPFHDQKTGVRYDCNNPDHAGWLRKESVWLKDWRPRFFVLKGSNLFFAKSEYETPHGRIDLSSCMTVKSAEQKTSKRNALEVSTHETTYFMYANTEKEKDDWIGAIGRAIVQASSTYQGDNN 387
RPP+ D T + Y+ N D G+L K+S WLKDWR RFF+LKGS LFF+KSE PHG IDLS+C TVKSA+ K+ KRN+ E+ST ETT+ +YA++EKEKDDWIG+ GRAIV+ SST+QG+ N
Sbjct: 4 FTRPPYVDPTTTMMYETNQADFEGYLTKQSQWLKDWRRRFFILKGSKLFFSKSERARPHGMIDLSTCTTVKSADLKSRKRNSFEISTPETTFLLYADSEKEKDDWIGSAGRAIVRCSSTFQGNTN 128
BLAST of mRNA_Ecto-sp9_F_contig1028.291.1 vs.
Match: Hypothetical (protein n=2 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CZ96_CYCTE) HSP 1 Score: 165 bits (418), Expect = 2.720e-49 Identity = 71/120 (59.17%), Postives = 95/120 (79.17%), Query Frame = 1
Query: 13 MARPPFHDQKTGVRYDCNNPDHAGWLRKESVWLKDWRPRFFVLKGSNLFFAKSEYETPHGRIDLSSCMTVKSAEQKTSKRNALEVSTHETTYFMYANTEKEKDDWIGAIGRAIVQASSTY 372
+ RP + D++T + YD NN D GWL K+S+WLKDWR R+F+LKGS LFF+K+ Y PHG IDLS C TVKSA+ K+ KRN+ E+ST E T+ +YA+TEKEKDDWIG++G++IV+ S+TY
Sbjct: 31 LMRPHYIDKQTNIIYDTNNADFEGWLTKQSMWLKDWRRRYFILKGSKLFFSKTNYSAPHGMIDLSQCTTVKSADLKSKKRNSFEISTPELTFLLYADTEKEKDDWIGSVGKSIVRCSNTY 150 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1028.291.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig1028.291.1 >prot_Ecto-sp9_F_contig1028.291.1 ID=prot_Ecto-sp9_F_contig1028.291.1|Name=mRNA_Ecto-sp9_F_contig1028.291.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=143bp MATTMARPPFHDQKTGVRYDCNNPDHAGWLRKESVWLKDWRPRFFVLKGSback to top mRNA from alignment at Ecto-sp9_F_contig1028:4454..6361- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig1028.291.1 ID=mRNA_Ecto-sp9_F_contig1028.291.1|Name=mRNA_Ecto-sp9_F_contig1028.291.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=1908bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1028:4454..6361- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1028:4454..6361- >mRNA_Ecto-sp9_F_contig1028.291.1 ID=mRNA_Ecto-sp9_F_contig1028.291.1|Name=mRNA_Ecto-sp9_F_contig1028.291.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=858bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1028:4454..6361- (Ectocarpus species9 EcSCA_722f female)back to top |