mRNA_Ecto-sp9_F_contig10220.244.1 (mRNA) Ectocarpus species9 EcSCA_722f female
|
Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig10220.244.1 vs.
Match: Peptidase_M24 (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LER8_ECTSI) HSP 1 Score: 328 bits (842), Expect = 5.610e-112 Identity = 160/165 (96.97%), Postives = 163/165 (98.79%), Query Frame = 1
Query: 1 NTLPPGVSWPSLHELSYRVACERLKDAGLLTGSVDDMMAANVGAVFMPHGLGHLIGLDTHDVGGYPEGGRARDSRPGHSSLRCGRDLADGMAITVEPGIYFIDHLLDKALADPEVAPFLVTSELARFRGFGGVRLEDDVVVTADGVRNLTNCARTVEDVEAVMAG 495
+ + PGVSWPSLHELSYRVACERLKDAGLLTGSVDDMMAANVGAVFMPHGLGHLIGLDTHDVGGYPEGGRARDSRPGHSSLRCGRDLADGMAITVEPGIYFIDHLL+KALADPEVAPFLVTSELARFRGFGGVRLEDDVVVTADGVRNLTNCARTVEDVEAVMAG
Sbjct: 112 DAMKPGVSWPSLHELSYRVACERLKDAGLLTGSVDDMMAANVGAVFMPHGLGHLIGLDTHDVGGYPEGGRARDSRPGHSSLRCGRDLADGMAITVEPGIYFIDHLLNKALADPEVAPFLVTSELARFRGFGGVRLEDDVVVTADGVRNLTNCARTVEDVEAVMAG 276
BLAST of mRNA_Ecto-sp9_F_contig10220.244.1 vs.
Match: AMP_N (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDB9_9PHAE) HSP 1 Score: 319 bits (818), Expect = 6.730e-105 Identity = 158/167 (94.61%), Postives = 160/167 (95.81%), Query Frame = 1
Query: 1 NTLPPGVSWPSLHELSYRVACERLKDAGLLTGSVDDMMAANVGAVFMPHGLGHLIGLDTHDVGGYPEGGRARDSRPGHSSLRCGRDLADGMAITVEPGIYFIDHLLDKALADPE--VAPFLVTSELARFRGFGGVRLEDDVVVTADGVRNLTNCARTVEDVEAVMAG 495
+ + PGVSWPSLHELSYRVACERLKDAGLLTGSVDDMMAANVGAVFMPHGLGHLIGLDTHDVGGYPEGGRARD RPGHSSLRCGRDLADGMAITVEPGIYFIDHLLDKAL DPE VAPFLV SELARFRGFGGVRLEDDVVVTADGVRNLTNCARTVEDVEAVMAG
Sbjct: 364 DAMKPGVSWPSLHELSYRVACERLKDAGLLTGSVDDMMAANVGAVFMPHGLGHLIGLDTHDVGGYPEGGRARDPRPGHSSLRCGRDLADGMAITVEPGIYFIDHLLDKALKDPEASVAPFLVKSELARFRGFGGVRLEDDVVVTADGVRNLTNCARTVEDVEAVMAG 530
BLAST of mRNA_Ecto-sp9_F_contig10220.244.1 vs.
Match: Peptidase (M24, structural domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHY5_9STRA) HSP 1 Score: 245 bits (625), Expect = 4.500e-79 Identity = 118/163 (72.39%), Postives = 135/163 (82.82%), Query Frame = 1
Query: 7 LPPGVSWPSLHELSYRVACERLKDAGLLTGSVDDMMAANVGAVFMPHGLGHLIGLDTHDVGGYPEGGRARDSRPGHSSLRCGRDLADGMAITVEPGIYFIDHLLDKALADPEVAPFLVTSELARFRGFGGVRLEDDVVVTADGVRNLTNCARTVEDVEAVMAG 495
+ PGV W +H+LSYRV CERLK AG+LTG VD MMAANVGAVFMPHGLGHL+GLDTHD GGYP G RD+RPG+ SLRCGR L GM ITVEPGIYFI+HLLD+ALADP ++ FLV + R+RG GGVRLEDDV+VT +G+RNLTNC RTVEDVE VM+G
Sbjct: 111 MKPGVPWKDMHDLSYRVGCERLKAAGVLTGDVDAMMAANVGAVFMPHGLGHLMGLDTHDCGGYPPGVE-RDARPGYKSLRCGRSLEAGMVITVEPGIYFINHLLDQALADPALSCFLVADAVERYRGTGGVRLEDDVLVTDNGIRNLTNCPRTVEDVEGVMSG 272
BLAST of mRNA_Ecto-sp9_F_contig10220.244.1 vs.
Match: Xaa-Pro (dipeptidase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RJ57_9ARCH) HSP 1 Score: 211 bits (536), Expect = 9.280e-66 Identity = 104/165 (63.03%), Postives = 123/165 (74.55%), Query Frame = 1
Query: 1 NTLPPGVSWPSLHELSYRVACERLKDAGLLTGSVDDMMAANVGAVFMPHGLGHLIGLDTHDVGGYPEGGRARDSRPGHSSLRCGRDLADGMAITVEPGIYFIDHLLDKALADPEVAPFLVTSELARFRGFGGVRLEDDVVVTADGVRNLTNCARTVEDVEAVMAG 495
+T+ PGV W +H+L+YRV +L + GLL G V+DMMAAN+GAVFMPHGLGH +G+DTHDVGGYPEG RD+R G+ SLR R L GM ITVEPG YFIDHLL+ ALAD A F LARFR FGGVR+EDDV+VT G+ N T+ RTVED+EAV AG
Sbjct: 99 DTMKPGVQWLDMHDLTYRVLLTKLTEGGLLMGEVEDMMAANLGAVFMPHGLGHFLGIDTHDVGGYPEGSE-RDARDGYRSLRANRALVAGMYITVEPGCYFIDHLLNAALADATKARFFNLDVLARFRTFGGVRIEDDVLVTEAGIDNFTHAPRTVEDIEAVWAG 262
BLAST of mRNA_Ecto-sp9_F_contig10220.244.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R9U7_9STRA) HSP 1 Score: 217 bits (552), Expect = 1.880e-65 Identity = 102/165 (61.82%), Postives = 124/165 (75.15%), Query Frame = 1
Query: 1 NTLPPGVSWPSLHELSYRVACERLKDAGLLTGSVDDMMAANVGAVFMPHGLGHLIGLDTHDVGGYPEGGRARDSRPGHSSLRCGRDLADGMAITVEPGIYFIDHLLDKALADPEVAPFLVTSELARFRGFGGVRLEDDVVVTADGVRNLTNCARTVEDVEAVMAG 495
++L PGV W S+HELSYR C+R +AGLL G ++ +M ANVG+ F PHGLGHLIGLDTHDVGGYP+G + RDSR G SLR R LA GM +TVEPG+YF+D+LLD+ + DP F V +L FRGFGGVRLED V++T G+ NLT C RTVEDVE V+AG
Sbjct: 334 SSLKPGVEWSSMHELSYRTTCQRFLEAGLLVGDLEALMEANVGSYFQPHGLGHLIGLDTHDVGGYPQGAQ-RDSRAGFKSLRLQRTLAAGMVLTVEPGVYFVDYLLDQLMTDPRTKAFAVREKLDEFRGFGGVRLEDSVLITETGMENLTTCPRTVEDVEGVIAG 497
BLAST of mRNA_Ecto-sp9_F_contig10220.244.1 vs.
Match: Xaa-Pro (dipeptidase n=2 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7RIK2_9NEOP) HSP 1 Score: 206 bits (523), Expect = 1.350e-63 Identity = 98/163 (60.12%), Postives = 119/163 (73.01%), Query Frame = 1
Query: 1 NTLPPGVSWPSLHELSYRVACERLKDAGLLTGSVDDMMAANVGAVFMPHGLGHLIGLDTHDVGGYPEGGRARDSRPGHSSLRCGRDLADGMAITVEPGIYFIDHLLDKALADPEVAPFLVTSELARFRGFGGVRLEDDVVVTADGVRNLTNCARTVEDVEAVM 489
N PGVSW +H L+ RV L+DAGLL G VD+MM A +GA+F PHGLGH +GLDTHDVGGY EG +R + PG + LR R L GM IT+EPG YF D LLDKALA+PE A F+V E+ RFR FGGVR+EDDV++T DGV N+T RT+E++EAVM
Sbjct: 109 NAAKPGVSWVDMHTLANRVLLAELRDAGLLQGDVDEMMKAGLGAIFQPHGLGHFMGLDTHDVGGYLEGTPSRPTEPGLNRLRTARVLEKGMVITIEPGCYFSDVLLDKALANPEQAKFMVPEEIERFRNFGGVRIEDDVIITEDGVENMTKVPRTIEEIEAVM 271
BLAST of mRNA_Ecto-sp9_F_contig10220.244.1 vs.
Match: Xaa-Pro (dipeptidase n=1 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7RIJ2_9NEOP) HSP 1 Score: 206 bits (523), Expect = 3.950e-63 Identity = 98/163 (60.12%), Postives = 119/163 (73.01%), Query Frame = 1
Query: 1 NTLPPGVSWPSLHELSYRVACERLKDAGLLTGSVDDMMAANVGAVFMPHGLGHLIGLDTHDVGGYPEGGRARDSRPGHSSLRCGRDLADGMAITVEPGIYFIDHLLDKALADPEVAPFLVTSELARFRGFGGVRLEDDVVVTADGVRNLTNCARTVEDVEAVM 489
N PGVSW +H L+ RV L+DAGLL G VD+MM A +GA+F PHGLGH +GLDTHDVGGY EG +R + PG + LR R L GM IT+EPG YF D LLDKALA+PE A F+V E+ RFR FGGVR+EDDV++T DGV N+T RT+E++EAVM
Sbjct: 146 NAAKPGVSWVDMHTLANRVLLAELRDAGLLQGDVDEMMKAGLGAIFQPHGLGHFMGLDTHDVGGYLEGTPSRPTEPGLNRLRTARVLEKGMVITIEPGCYFSDVLLDKALANPEQAKFMVPEEIERFRNFGGVRIEDDVIITEDGVENMTKVPRTIEEIEAVM 308
BLAST of mRNA_Ecto-sp9_F_contig10220.244.1 vs.
Match: AMP_N (domain-containing protein n=2 Tax=Callosobruchus maculatus TaxID=64391 RepID=A0A653CTC3_CALMS) HSP 1 Score: 207 bits (527), Expect = 7.010e-62 Identity = 101/164 (61.59%), Postives = 122/164 (74.39%), Query Frame = 1
Query: 4 TLPPGVSWPSLHELSYRVACERLKDAGLLTGSVDDMMAANVGAVFMPHGLGHLIGLDTHDVGGYPEGGRARDSRPGHSSLRCGRDLADGMAITVEPGIYFIDHLLDKALADPEVAPFLVTSELARFRGFGGVRLEDDVVVTADGVRNLTNCARTVEDVEAVMAG 495
T PGVSW +H LSY+ E+LKD GLL+GSVD+MM A++GA+F PHGLGHL+GLD HDVGGY EG R SRPG SLR R L + M +T+EPG YFID LLDKAL DP+ + FLV + RFRG GGVR+EDDV++T DGV NLT RTV+++E MAG
Sbjct: 323 TAKPGVSWSDMHLLSYKTMLEKLKDGGLLSGSVDEMMEADLGAIFQPHGLGHLMGLDVHDVGGYLEGFPERSSRPGLKSLRTARVLEENMVMTIEPGCYFIDPLLDKALNDPKQSKFLVPEVIKRFRGSGGVRIEDDVLITKDGVVNLTKVPRTVQEIENWMAG 486
BLAST of mRNA_Ecto-sp9_F_contig10220.244.1 vs.
Match: AMP_N (domain-containing protein n=9 Tax=Metatheria TaxID=9263 RepID=F7DI23_MONDO) HSP 1 Score: 205 bits (521), Expect = 5.450e-61 Identity = 102/164 (62.20%), Postives = 120/164 (73.17%), Query Frame = 1
Query: 1 NTLPPGVSWPSLHELSYRVACERLKDAGLLTGSVDDMMAANVGAVFMPHGLGHLIGLDTHDVGGYPEGGRARDSRPGHSSLRCGRDLADGMAITVEPGIYFIDHLLDKALADPEVAPFLVTSELARFRGFGGVRLEDDVVVTADGVRNLTNCARTVEDVEAVMA 492
N + PGVSWP +H L+ RV E L G+LTG+VDDM+ ++GAVFMPHGLGH +G+D HDVGGYPEG D PG SLR R L GM +TVEPGIYFIDHLLD+ALADP A F+ L RFRGFGGVR+E+DVVVTA G+ LT RTVE++EA MA
Sbjct: 318 NAIKPGVSWPDMHRLADRVHLEELTRIGILTGNVDDMVKVHLGAVFMPHGLGHFLGIDVHDVGGYPEGVERIDE-PGLRSLRTARQLEQGMVLTVEPGIYFIDHLLDQALADPARACFINNQTLQRFRGFGGVRIEEDVVVTASGMELLTCVPRTVEEIEACMA 480
BLAST of mRNA_Ecto-sp9_F_contig10220.244.1 vs.
Match: Xaa-Pro (dipeptidase (Fragment) n=2 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=A0A2L2Y1N6_PARTP) HSP 1 Score: 204 bits (518), Expect = 9.750e-61 Identity = 96/160 (60.00%), Postives = 122/160 (76.25%), Query Frame = 1
Query: 13 PGVSWPSLHELSYRVACERLKDAGLLTGSVDDMMAANVGAVFMPHGLGHLIGLDTHDVGGYPEGGRARDSRPGHSSLRCGRDLADGMAITVEPGIYFIDHLLDKALADPEVAPFLVTSELARFRGFGGVRLEDDVVVTADGVRNLTNCARTVEDVEAVMA 492
PGV+W +H+L+ RV E LK GLL G +++MM+ +GA+FMPHGLGH +G+DTHDVGGY EG R + G SLR RDLA GM ITVEPGIYFID LLDKAL DP++A FLV + +FRGFGGVR+EDD+V+T DG+ +T+ RTVE++EA+MA
Sbjct: 312 PGVNWVEMHKLADRVHLEELKKGGLLKGDIEEMMSVRLGAIFMPHGLGHFMGIDTHDVGGYLEGSPPRPAEDGLKSLRTARDLAAGMVITVEPGIYFIDCLLDKALNDPKLAKFLVPDVIEKFRGFGGVRIEDDIVITEDGMELMTDVPRTVEEIEALMA 471 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10220.244.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig10220.244.1 >prot_Ecto-sp9_F_contig10220.244.1 ID=prot_Ecto-sp9_F_contig10220.244.1|Name=mRNA_Ecto-sp9_F_contig10220.244.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=165bp NTLPPGVSWPSLHELSYRVACERLKDAGLLTGSVDDMMAANVGAVFMPHGback to top mRNA from alignment at Ecto-sp9_F_contig10220:691..2014+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig10220.244.1 ID=mRNA_Ecto-sp9_F_contig10220.244.1|Name=mRNA_Ecto-sp9_F_contig10220.244.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=1324bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10220:691..2014+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig10220:691..2014+ >mRNA_Ecto-sp9_F_contig10220.244.1 ID=mRNA_Ecto-sp9_F_contig10220.244.1|Name=mRNA_Ecto-sp9_F_contig10220.244.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=990bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10220:691..2014+ (Ectocarpus species9 EcSCA_722f female)back to top |