mRNA_Ecto-sp9_F_contig10205.233.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig10205.233.1
Unique NamemRNA_Ecto-sp9_F_contig10205.233.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig10205.233.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIN5_ECTSI)

HSP 1 Score: 467 bits (1202), Expect = 6.640e-163
Identity = 245/256 (95.70%), Postives = 251/256 (98.05%), Query Frame = 1
Query:    1 VVQIFVPAGFAVKWLGCSETTIFVVNFLAMVPLASILGDFTEEVSAHTNQTLGGLIQATLGNAVEIVVSIQALYANQIRVVQASLLGSVFSNMLLVLGCCFFFGGLKHKEQRFNSTSAIANMSLLLLSSLALVLPTPLSHAAEMGDLLTVSRFSGVFLLIMYVQLLIFQFKTHAYLFASTDEDGTNLKLGTSLVGLVVITGLVAWLSEFLVDAIDGFTEEAHLSKSFVGLILLPIIGNAVEHITAITVAMKVKWNL 768
            V+ IFVPAGFAVKWLGCSETTIFVVNFLAMVPLASILGDFTEEVSAHTNQTLGGLIQATLGNAVEIVVSIQALYANQIRVVQASLLGSVFSNMLLVLGCCFFFGGLKHKEQRFNSTSAIANMSLLLLSSLALVLPTPLSHAAEMGDLLTVSRFSGVFLLIMYVQLL+FQFKTHAYLFA+TD+DGTNLKLGTSLVGL V+TGLVAWLSEFLVDAIDGFTEEAHLSKSFVGLILLPIIGNAVEHITA+TVAMK K  L
Sbjct:  113 VMMIFVPAGFAVKWLGCSETTIFVVNFLAMVPLASILGDFTEEVSAHTNQTLGGLIQATLGNAVEIVVSIQALYANQIRVVQASLLGSVFSNMLLVLGCCFFFGGLKHKEQRFNSTSAIANMSLLLLSSLALVLPTPLSHAAEMGDLLTVSRFSGVFLLIMYVQLLVFQFKTHAYLFANTDDDGTNLKLGTSLVGLAVVTGLVAWLSEFLVDAIDGFTEEAHLSKSFVGLILLPIIGNAVEHITAVTVAMKNKMEL 368          
BLAST of mRNA_Ecto-sp9_F_contig10205.233.1 vs.
Match: Sodium/calcium (exchanger protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBG0_9STRA)

HSP 1 Score: 342 bits (876), Expect = 7.960e-115
Identity = 174/253 (68.77%), Postives = 215/253 (84.98%), Query Frame = 1
Query:   10 IFVPAGFAVKWLGCSETTIFVVNFLAMVPLASILGDFTEEVSAHTNQTLGGLIQATLGNAVEIVVSIQALYANQIRVVQASLLGSVFSNMLLVLGCCFFFGGLKHKEQRFNSTSAIANMSLLLLSSLALVLPTPLSHAAEMGDLLTVSRFSGVFLLIMYVQLLIFQFKTHAYLFASTDEDGTNLKLGTSLVGLVVITGLVAWLSEFLVDAIDGFTEEAHLSKSFVGLILLPIIGNAVEHITAITVAMKVKWNL 768
            + VP   A  +LG  +T +FV+NFLAM+PLAS+LG+FTEEV+ HTNQT+GGLI AT GNAVE+VV++QAL+A QIRVVQASL+GSVFSNMLLVLGCCFFFGGL++KEQRFNSTSA+ANMSLLLLSSLALVLPTPL+ + E G++L +SRF+G+ LL MYVQL+ FQ KTH++L+   DE  + L +  + +GL+ +T  VA+LSE LVD+IDGFTE+AHLSK+FVGLILLPIIGNAVEH+TA+TVAMK K  L
Sbjct:    3 VLVPLAVASHFLGWGDTAVFVLNFLAMMPLASLLGEFTEEVAMHTNQTIGGLINATFGNAVEVVVALQALHAGQIRVVQASLMGSVFSNMLLVLGCCFFFGGLRYKEQRFNSTSAVANMSLLLLSSLALVLPTPLAQSHEDGNVLLISRFAGICLLFMYVQLMFFQLKTHSHLYGDEDEVRSELSMPGACIGLLTVTLAVAYLSELLVDSIDGFTEQAHLSKTFVGLILLPIIGNAVEHVTAVTVAMKDKMEL 255          
BLAST of mRNA_Ecto-sp9_F_contig10205.233.1 vs.
Match: Hypothetical (protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W0D3_9STRA)

HSP 1 Score: 306 bits (784), Expect = 7.420e-100
Identity = 156/255 (61.18%), Postives = 205/255 (80.39%), Query Frame = 1
Query:   10 IFVPAGFAVKWLGCSETTIFVVNFLAMVPLASILGDFTEEVSAHTNQTLGGLIQATLGNAVEIVVSIQALYANQIRVVQASLLGSVFSNMLLVLGCCFFFGGLKHKEQRFNSTSAIANMSLLLLSSLALVLPTPLSHAAEMGD--LLTVSRFSGVFLLIMYVQLLIFQFKTHAYLFASTDEDGTNLKLGTSLVGLVVITGLVAWLSEFLVDAIDGFTEEAHLSKSFVGLILLPIIGNAVEHITAITVAMKVKWNL 768
            +F+P  F   +       +F +NFLAM+PLAS+LGDFTEE++AHTNQ +GGLI AT GNAVE+VV+IQAL AN+IRVVQAS++GS+FSN+LLVLG CFFFGGLKHKEQ FNST+A AN+SLL L  +ALVLPTP +   ++ +  +L +SRF+ +FL++MY QLLIFQ KTHA+LFA  DE+  +L    ++ GLV++TG++A +S+FLVD+IDGF E   +SK+F+GLI+LPI+GNAVEHITAI+VAMK K +L
Sbjct:  141 VFIPFAFLSYYREWGPDWVFWLNFLAMIPLASMLGDFTEELAAHTNQVIGGLINATFGNAVEVVVAIQALLANEIRVVQASMIGSIFSNLLLVLGGCFFFGGLKHKEQSFNSTAATANISLLALGCMALVLPTPFAEYYDVEEERVLHISRFAALFLMLMYAQLLIFQIKTHAFLFADEDEEMASLPFWVAMAGLVIVTGVIAIMSDFLVDSIDGFCESTGVSKTFIGLIILPIVGNAVEHITAISVAMKDKMDL 395          
BLAST of mRNA_Ecto-sp9_F_contig10205.233.1 vs.
Match: Hypothetical (protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZP93_TRICV)

HSP 1 Score: 302 bits (774), Expect = 2.270e-99
Identity = 157/254 (61.81%), Postives = 204/254 (80.31%), Query Frame = 1
Query:   13 FVPAGFAVKWLGCSETTIFVVNFLAMVPLASILGDFTEEVSAHTNQTLGGLIQATLGNAVEIVVSIQALYANQIRVVQASLLGSVFSNMLLVLGCCFFFGGLKHKEQRFNSTSAIANMSLLLLSSLALVLPTPLSHAAEMGD--LLTVSRFSGVFLLIMYVQLLIFQFKTHAYLFASTDEDGTNLKLGTSLVGLVVITGLVAWLSEFLVDAIDGFTEEAHLSKSFVGLILLPIIGNAVEHITAITVAMKVKWNL 768
            F+P G+A    G S T++F +NFLAM+PLA+ILGDFTEEV+AHTNQ +GGLI AT GNAVE+VV++QAL+AN+IRVVQAS++GS+FSN+LLVLG CFFFGGLK+KEQ FNST+  ANMSLL LSS+AL LPTP +   E+ D  +L +SR + VFL+ MY+QLL+FQ  THA LF   D+  T +    +L GLVV+T ++A LS++LV +IDGF  E+ +S++FVGLI+LPI+GNAVEH+TAI+VAMK K +L
Sbjct:    2 FMPLGWASHRFGWSPTSVFCLNFLAMIPLAAILGDFTEEVAAHTNQVVGGLINATFGNAVEVVVAVQALHANEIRVVQASMIGSIFSNLLLVLGGCFFFGGLKYKEQSFNSTAVTANMSLLALSSVALALPTPFAEYYEVHDDNVLVISRIAAVFLIFMYLQLLVFQLHTHADLFDDDDDTPTEMSSTAALTGLVVVTLVIAQLSDYLVGSIDGFCTESGVSRTFVGLIVLPIVGNAVEHVTAISVAMKDKMDL 255          
BLAST of mRNA_Ecto-sp9_F_contig10205.233.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V7W0_9STRA)

HSP 1 Score: 295 bits (755), Expect = 5.900e-96
Identity = 158/256 (61.72%), Postives = 198/256 (77.34%), Query Frame = 1
Query:   10 IFVPAGFAVKWLGCSETTIFVVNFLAMVPLASILGDFTEEVSAHTNQTLGGLIQATLGNAVEIVVSIQALYANQIRVVQASLLGSVFSNMLLVLGCCFFFGGLKHKEQRFNSTSAIANMSLLLLSSLALVLPTPLSHAA--EMGDLLTVSRFSGVFLLIMYVQLLIFQFKTHAYLFASTDE-DGTNLKLGTSLVGLVVITGLVAWLSEFLVDAIDGFTEEAHLSKSFVGLILLPIIGNAVEHITAITVAMKVKWNL 768
            IF+P  FA  +L    T +F++NFLAM+PLAS+LGDFTEE + H  QTLGGL+ AT GNAVE+VVSIQAL + QIRVVQ+SLLGSV SN+LLVLGCCFFFGG++  EQ FN T+A AN SLLLLSSLAL+LPTP+      E  ++L VSR +GVF+L MY+QLL FQ +TH ++F      +G  + L  +LVGL ++T  V+ LS++LVD+IDGFTEEA LSKSFVG+ILLPIIGN VEH+TA+++AMK K  L
Sbjct:   39 IFLPLAFASVYLDWGPTLVFILNFLAMIPLASLLGDFTEEAATHVGQTLGGLLNATFGNAVEVVVSIQALRSGQIRVVQSSLLGSVLSNLLLVLGCCFFFGGIRRDEQTFNVTAAKANTSLLLLSSLALILPTPMGSTGYVEEENVLFVSRITGVFMLFMYLQLLFFQLRTHKHMFEDEXXXEGGGMSLSGALVGLALMTLAVSVLSDYLVDSIDGFTEEADLSKSFVGIILLPIIGNVVEHLTAVSMAMKDKMEL 294          
BLAST of mRNA_Ecto-sp9_F_contig10205.233.1 vs.
Match: Hypothetical (protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9TFQ4_PHATR)

HSP 1 Score: 291 bits (744), Expect = 9.650e-95
Identity = 152/254 (59.84%), Postives = 196/254 (77.17%), Query Frame = 1
Query:   19 PAGFAVKWLGCSETTIFVVNFLAMVPLASILGDFTEEVSAHTNQTLGGLIQATLGNAVEIVVSIQALYANQIRVVQASLLGSVFSNMLLVLGCCFFFGGLKHKEQRFNSTSAIANMSLLLLSSLALVLPTPLSHAAEMGD--LLTVSRFSGVFLLIMYVQLLIFQFKTHAYLFASTDEDG--TNLKLGTSLVGLVVITGLVAWLSEFLVDAIDGFTEEAHLSKSFVGLILLPIIGNAVEHITAITVAMKVKWNL 768
            P G+   +     T IF +NF  M+PLASILGDFTEEV+ HTNQT+GGLI AT GNAVE+VV+IQAL AN+IRVVQAS++GS+FSN+LLVLGCCFFFGGL H++QRFNS +A ANM LL LSS+AL+LPTP +   E+ D  +LTVSR +  FL+ MY+QLL FQ KTHA LFA T +D     +    S+VGL+  T ++   S++LV++IDGF  ++ +S++FVG+ILLPI+GNAVEH+TA+TVAMK K +L
Sbjct:    9 PLGWYSHYASWGSTWIFWLNFFTMIPLASILGDFTEEVALHTNQTIGGLINATFGNAVEVVVAIQALLANEIRVVQASMIGSIFSNLLLVLGCCFFFGGLGHQQQRFNSVAATANMGLLALSSIALILPTPFAAYYELHDAHVLTVSRIAACFLMCMYLQLLFFQLKTHANLFAGTQDDSELAVMPFWVSIVGLLFTTLVITIFSDYLVESIDGFVTDSGISRTFVGIILLPIVGNAVEHVTAVTVAMKDKMDL 262          
BLAST of mRNA_Ecto-sp9_F_contig10205.233.1 vs.
Match: Ca2+:H+ (antiporter n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KS18_FISSO)

HSP 1 Score: 288 bits (736), Expect = 5.540e-92
Identity = 150/254 (59.06%), Postives = 194/254 (76.38%), Query Frame = 1
Query:   19 PAGFAVKWLGCSETTIFVVNFLAMVPLASILGDFTEEVSAHTNQTLGGLIQATLGNAVEIVVSIQALYANQIRVVQASLLGSVFSNMLLVLGCCFFFGGLKHKEQRFNSTSAIANMSLLLLSSLALVLPTPLSHAAEMGD--LLTVSRFSGVFLLIMYVQLLIFQFKTHAYLFASTDEDG--TNLKLGTSLVGLVVITGLVAWLSEFLVDAIDGFTEEAHLSKSFVGLILLPIIGNAVEHITAITVAMKVKWNL 768
            P      +     T +F +NF+ ++P ASILGDFTEE++ HTN+T+GGLI A+ GNAVE+VV+I AL A +IRVVQ SLLGS+FSN+LLVLGCCFFFGGLKHKEQ+FN+TSA ANM LL LSS+AL LPTP +    + D  +L VSR + VFLL MY QLL+FQ  THA +F +  +D   T + +  +LVGL+  T LVA+ S+FLV++IDGFTE + +S++FVG+ILLPI+GNAVEH+TA+TVAMK K +L
Sbjct:  127 PLALVSVYFHWGATWVFWLNFMTLIPFASILGDFTEELALHTNETIGGLINASFGNAVEVVVAINALLAGEIRVVQGSLLGSIFSNLLLVLGCCFFFGGLKHKEQKFNATSATANMGLLALSSIALALPTPFAQYYNLHDSEVLLVSRLAAVFLLFMYAQLLVFQLHTHADIFENDGDDAPFTRITMPVALVGLLTTTLLVAFFSDFLVESIDGFTEASGISRTFVGIILLPIVGNAVEHVTAVTVAMKDKMDL 380          
BLAST of mRNA_Ecto-sp9_F_contig10205.233.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W4S0_9STRA)

HSP 1 Score: 280 bits (717), Expect = 1.140e-90
Identity = 140/258 (54.26%), Postives = 196/258 (75.97%), Query Frame = 1
Query:    1 VVQIFVPAGFAVKWLGCSETTIFVVNFLAMVPLASILGDFTEEVSAHTNQTLGGLIQATLGNAVEIVVSIQALYANQIRVVQASLLGSVFSNMLLVLGCCFFFGGLKHKEQRFNSTSAIANMSLLLLSSLALVLPTPLS--HAAEMGDLLTVSRFSGVFLLIMYVQLLIFQFKTHAYLFASTDEDGTNLKLGTSLVGLVVITGLVAWLSEFLVDAIDGFTEEAHLSKSFVGLILLPIIGNAVEHITAITVAMKVKWNL 768
            ++ +F P      + G    ++F +NFL MVPLA++LGDFTEE++AHTNQ +GGL+ AT GN VE++++ QAL A +IRVVQAS++GS+FSN+LLVLGCCFFFGGLK+KEQRFNS +A+ANMSLL L S+ALVLPTP +  +  + G +LT+SR + + L+IMYVQLLIFQ  TH ++F   +E+   +    +++GL+V T  +A  S  LV +IDG+   + +SK+FVG+I+LPI+GNAVEH+TA++VAMK K +L
Sbjct:   86 ILFLFSPFALYSGYAGWPAASVFWLNFLTMVPLAALLGDFTEEIAAHTNQVIGGLVNATFGNMVEVIIAFQALLAGEIRVVQASMIGSIFSNLLLVLGCCFFFGGLKYKEQRFNSVAAVANMSLLALCSVALVLPTPFAEYYDVDHGIVLTISRIAAIILIIMYVQLLIFQLYTHTHIFEDEEEEEHAIPFYVAIIGLIVTTFSIAIFSNLLVSSIDGYCNTSGISKTFVGIIILPIVGNAVEHMTAVSVAMKNKMDL 343          
BLAST of mRNA_Ecto-sp9_F_contig10205.233.1 vs.
Match: Hypothetical (protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KYE4_9STRA)

HSP 1 Score: 283 bits (725), Expect = 8.080e-90
Identity = 150/245 (61.22%), Postives = 193/245 (78.78%), Query Frame = 1
Query:   52 SETTIFVVNFLAMVPLASILGDFTEEVSAHTNQTLGGLIQATLGNAVEIVVSIQALYANQIRVVQASLLGSVFSNMLLVLGCCFFFGGLKHKEQRFNSTSAIANMSLLLLSSLALVLPTPLSHAAEMGD--LLTVSRFSGVFLLIMYVQLLIFQFKTHAYLF-ASTDEDG---TNLKLGTSLVGLVVITGLVAWLSEFLVDAIDGFTEEAHLSKSFVGLILLPIIGNAVEHITAITVAMKVKWNL 768
            S+T  F +NF+ M+PLASILGDFTEEV+ HTN+T+GGLI AT GNAVE+VV+IQAL AN+IRVVQ+S+LGS+FSN+LLVLG CFFFGGLK+  Q FN+T+A ANM LL LS++ALVLPTP +H  +M D  +L +SRFS +FL+ MY QLL+FQ  THA  F A   EDG    N+  G  ++GL+V T LV   S++LV++IDGFT  + +S++FVG++LLPI+GNAVEH+TAITVA K K +L
Sbjct:  166 SDTAKFWLNFIVMIPLASILGDFTEEVALHTNETIGGLINATFGNAVEVVVAIQALLANEIRVVQSSMLGSIFSNLLLVLGGCFFFGGLKYPNQSFNATAATANMGLLALSAIALVLPTPFAHYYDMHDDRVLLISRFSAIFLMFMYAQLLVFQLHTHANAFTAEGGEDGKELANMSFGMGILGLLVCTLLVTIFSDYLVESIDGFTTASGISRTFVGIVLLPIVGNAVEHVTAITVARKDKMDL 410          
BLAST of mRNA_Ecto-sp9_F_contig10205.233.1 vs.
Match: Hypothetical (protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BZT3_9STRA)

HSP 1 Score: 280 bits (717), Expect = 9.680e-90
Identity = 144/255 (56.47%), Postives = 197/255 (77.25%), Query Frame = 1
Query:   10 IFVPAGFAVKWLGCSETTIFVVNFLAMVPLASILGDFTEEVSAHTNQTLGGLIQATLGNAVEIVVSIQALYANQIRVVQASLLGSVFSNMLLVLGCCFFFGGLKHKEQRFNSTSAIANMSLLLLSSLALVLPTPLSHAAEMG--DLLTVSRFSGVFLLIMYVQLLIFQFKTHAYLFASTDEDGTNLKLGTSLVGLVVITGLVAWLSEFLVDAIDGFTEEAHLSKSFVGLILLPIIGNAVEHITAITVAMKVKWNL 768
            + +P  +A   L  S++ IF +NF AM+PLAS+LG+FTEE++ HTNQT+GGLI A+ GNAVEIV+SIQAL AN+IRV+QASL+GS+FSN+LLV GCCFFFGGLK+ +Q FNS +  AN SLL+LSSLA +LPTP +   +    ++L+ SR + +FLL+MY+ LL+FQ KTHA+L    +++  N+    +++GLV +T LV+  SE+LV +IDGF E + +SK+FVGLI+LPI+GN VEHITA+TVA K K +L
Sbjct:   77 LLMPLAYASVKLQWSDSLIFWLNFGAMLPLASLLGEFTEELALHTNQTIGGLINASFGNAVEIVISIQALLANEIRVIQASLIGSIFSNLLLVQGCCFFFGGLKYPQQSFNSVTLSANTSLLMLSSLAFILPTPYAAYTDTTNEEVLSTSRITSIFLLLMYILLLVFQLKTHAFLLEDDNDEKPNISFWAAIIGLVSVTVLVSIFSEYLVSSIDGFVEGSDISKTFVGLIILPIVGNGVEHITAVTVARKDKMDL 331          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10205.233.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized6.640e-16395.70protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Sodium/calcium7.960e-11568.77exchanger protein-domain-containing protein n=1 Ta... [more]
Hypothetical7.420e-10061.18protein n=2 Tax=Ditylum brightwellii TaxID=49249 R... [more]
Hypothetical2.270e-9961.81protein n=1 Tax=Trieres chinensis TaxID=1514140 Re... [more]
Hypothetical5.900e-9661.72protein n=1 Tax=Fibrocapsa japonica TaxID=94617 Re... [more]
Hypothetical9.650e-9559.84protein n=2 Tax=Phaeodactylum tricornutum TaxID=28... [more]
Ca2+:H+5.540e-9259.06antiporter n=2 Tax=Fistulifera solaris TaxID=15195... [more]
Hypothetical1.140e-9054.26protein (Fragment) n=1 Tax=Eucampia antarctica Tax... [more]
Hypothetical8.080e-9061.22protein n=1 Tax=Amphora coffeiformis TaxID=265554 ... [more]
Hypothetical9.680e-9056.47protein n=2 Tax=Corethron hystrix TaxID=216773 Rep... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10205contigEcto-sp9_F_contig10205:573..4659 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score466.5
Seed ortholog evalue8.2e-129
Seed eggNOG ortholog2880.D7FIN5
Preferred nameVCX1
KEGG koko:K07300,ko:K08286,ko:K11699,ko:K12619,ko:K20404
KEGG TC2.A.19
KEGG Pathwayko03008,ko03018,ko04150,map03008,map03018,map04150
GOsGO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0003674,GO:0005215,GO:0005451,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0007034,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015079,GO:0015085,GO:0015291,GO:0015297,GO:0015298,GO:0015299,GO:0015318,GO:0015368,GO:0015369,GO:0015386,GO:0015491,GO:0015672,GO:0016020,GO:0016021,GO:0019725,GO:0022804,GO:0022821,GO:0022857,GO:0022890,GO:0030001,GO:0030003,GO:0031090,GO:0031224,GO:0034220,GO:0034486,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0046873,GO:0048878,GO:0050801,GO:0051139,GO:0051179,GO:0051234,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0055085,GO:0060401,GO:0065007,GO:0065008,GO:0070588,GO:0070838,GO:0071804,GO:0071805,GO:0072503,GO:0072507,GO:0072511,GO:0098588,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0098805,GO:0098852,GO:0099516,GO:0140146,GO:1901660,GO:1902600
EggNOG free text desc.calcium:proton antiporter activity
EggNOG OGsCOG0387@1,KOG1397@2759
EC2.7.7.48
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko02000,ko03009,ko03016,ko03019,ko03021,ko03036
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionCalcium/proton exchanger CAX
Ec32 orthologEc-27_000430.1
Exons6
Model size768
Cds size768
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10205.233.1prot_Ecto-sp9_F_contig10205.233.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig10205 573..4659 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928216.1330202-CDS-Ecto-sp9_F_contig10205:572..6801622928216.1330202-CDS-Ecto-sp9_F_contig10205:572..680Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10205 573..680 -
1692277798.8970714-CDS-Ecto-sp9_F_contig10205:572..6801692277798.8970714-CDS-Ecto-sp9_F_contig10205:572..680Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10205 573..680 -
1622928216.151298-CDS-Ecto-sp9_F_contig10205:1154..13071622928216.151298-CDS-Ecto-sp9_F_contig10205:1154..1307Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10205 1155..1307 -
1692277798.9104435-CDS-Ecto-sp9_F_contig10205:1154..13071692277798.9104435-CDS-Ecto-sp9_F_contig10205:1154..1307Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10205 1155..1307 -
1622928216.1715631-CDS-Ecto-sp9_F_contig10205:2438..25191622928216.1715631-CDS-Ecto-sp9_F_contig10205:2438..2519Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10205 2439..2519 -
1692277798.9277115-CDS-Ecto-sp9_F_contig10205:2438..25191692277798.9277115-CDS-Ecto-sp9_F_contig10205:2438..2519Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10205 2439..2519 -
1622928216.193008-CDS-Ecto-sp9_F_contig10205:3003..31831622928216.193008-CDS-Ecto-sp9_F_contig10205:3003..3183Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10205 3004..3183 -
1692277798.9427142-CDS-Ecto-sp9_F_contig10205:3003..31831692277798.9427142-CDS-Ecto-sp9_F_contig10205:3003..3183Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10205 3004..3183 -
1622928216.2062106-CDS-Ecto-sp9_F_contig10205:3894..40471622928216.2062106-CDS-Ecto-sp9_F_contig10205:3894..4047Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10205 3895..4047 -
1692277798.955315-CDS-Ecto-sp9_F_contig10205:3894..40471692277798.955315-CDS-Ecto-sp9_F_contig10205:3894..4047Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10205 3895..4047 -
1622928216.2271783-CDS-Ecto-sp9_F_contig10205:4566..46591622928216.2271783-CDS-Ecto-sp9_F_contig10205:4566..4659Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10205 4567..4659 -
1692277798.97978-CDS-Ecto-sp9_F_contig10205:4566..46591692277798.97978-CDS-Ecto-sp9_F_contig10205:4566..4659Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10205 4567..4659 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig10205.233.1

>prot_Ecto-sp9_F_contig10205.233.1 ID=prot_Ecto-sp9_F_contig10205.233.1|Name=mRNA_Ecto-sp9_F_contig10205.233.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=256bp
VVQIFVPAGFAVKWLGCSETTIFVVNFLAMVPLASILGDFTEEVSAHTNQ
TLGGLIQATLGNAVEIVVSIQALYANQIRVVQASLLGSVFSNMLLVLGCC
FFFGGLKHKEQRFNSTSAIANMSLLLLSSLALVLPTPLSHAAEMGDLLTV
SRFSGVFLLIMYVQLLIFQFKTHAYLFASTDEDGTNLKLGTSLVGLVVIT
GLVAWLSEFLVDAIDGFTEEAHLSKSFVGLILLPIIGNAVEHITAITVAM
KVKWNL
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mRNA from alignment at Ecto-sp9_F_contig10205:573..4659-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig10205.233.1 ID=mRNA_Ecto-sp9_F_contig10205.233.1|Name=mRNA_Ecto-sp9_F_contig10205.233.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=4087bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10205:573..4659- (Ectocarpus species9 EcSCA_722f female)
GTTGTCCAGATCTTCGTGCCGGCGGGCTTTGCCGTGAAATGGTTAGGGTG CTCGGAAACGACAATCTTCGTCGTTAACTTCTTGGCTATGGTGGTGAGTT CCGGCGGTCATGTACCGTCCGTTTAGCGCATGTTTGTCACGGCTGTATAC GTGAACGAAGCAATACCTCATGGAGAAAATGTAGGTCGCCTGTGTGTCTG TGGGGGGCGGCGGCTGTTGTTTGGAGTGTGTCTGTGCCCTTTAGTGGGAG GAGGGGGATGATTCCCGCCGAAGGACGTGGGCGCTGGAAGGGTCATCTCC TGCGAGTTCTCCCGATACCTGAGGGTACAGGTTCGACAATCAGGGTGTAG TTGAACGAGAGCCGCTCCTCTCTCGCTCTGTTTTCCCTTCCATGGGCGAG ACCTGACTCTCATGGAATACCACCTTACAGAGGCGACGTACATCGGCGAC GGCGCCGATTACGCGCGTGCTGCTGGGCGCACCTAATACGAGACTTGAGC GACGATGCTCCTTATCGTGCGGCTACGGCGGTTGTTTGACGCTAATCAAG TTAATTGTCGCAAGCAACGAAATTGATGACCCCCCACCCCGTTTGCGGAC GAATTTGCGCAGCCCCTCGCCAGCATTCTGGGGGACTTCACGGAGGAGGT GTCGGCGCACACCAACCAGACGCTCGGCGGGCTCATCCAGGCGACGCTGG GAAACGCGGTCGAGATTGTGGTGTCCATCCAGGCTCTCTACGCGAACCAG ATTCGGGTGGTACAGGTGCGCTGCCCAGCGAGTCCACAGGTTGTGTTGGC GGTGTTTTGCATCGTCCGCTTTGACCGAAAGAGAAAACCAGCCGTTTGGT GCCGGCGGGTAAACATCAGGCCCCTCCGAACGAGGCTTGAGGCACGCAGA GTGGACGGCAGGCACCCAGAACATGCGAAAACATAATAGAAGCCTCTCTA CAAACCCTTCGACGGAGGCACACACCGTGGCTCACCAAATCCTTCCCCCG AGTCTCGGGAAAGTAGTTTACACGTGTGCTCTTTGCTCGCGTGGACTGGT CGTGACAATCGGCTGAGAAAAGACGCTAATAGACGGGAGAGAGAGTTGTG TTTGTTATTTCATTGCATCTGTGCTGCGCGTCTCTGATGTTGGGTTGTGT GTTTCTCTGTTTGTACTCCGAGTAGTTAGGATCGACCGCACCAGTCGGCT CACCGACGAGAAAACGTCAGTCTTGAATCATTTTGCTTACCACAGGAGTG AATTCGGACGGCGCGTCACTTTACGGCGGAGTTAGTTTGATGCATTGGTT TAGTATGGAAGAGGAGGACGCTACTCGGCAGAGGTCGGGACGTTTTTTTC AGTGTAAAGATACAAAGATTAGCAGCAGGAGCAGCAGCAGTAATATTACC AACACCAACACGGCCACCACCACAACCACCACCAACATTTGTGTGTATCT CTCTCTGCCTGCCCGCTTGCTACCAGGCTTCGTTGCTCGGATCGGTGTTC TCGAACATGCTGCTGGTTCTCGGCTGCTGTTTCTTCTTCGGCGGGCTCAA GCACAAGGAGCAGCGCTTCAACTCCACCAGCGCGATCGCCAACATGAGCC TGCTCCTGCTTTCCTCGCTGGCCCTGGTCTTGCCGACACCTCTTTCGCAC GCCGCGGTCAGTCACTTGTTCAGTCGAGCAATCGTTGCGCTGTTGGTGGC TGTAGCGTAAACTCTTGCATTTCTTCGGCATGGCCCTTGTGTGTGGGTGA CAAGTGTGAACACCACCGGCTGCCGGTTGGTTTTGGGGTATAGTGACGGA CTTGCTGTCTGACTCTTGGAGTTCCGTCATCAGCACGACTCTGTGCGGGT GACAAACGGGTCAAACTCCTACTGCCGATGTGTTTTAGGGCGATGGTGCT GTAGTGAGCGACTAGCTGGTGACTGCCTTGGTACACTTTACATACATGAC GTGTCTGCGTGTGGCACTCTGTGTTGTCGCTGTGATGTTGGTGTGCATCT GCCGTGTCCGTGCGTCCTACTGCCCCCCCTGTCTAGTTTTCTTCCACCTT GCCTGCTCCGTTACTTTAATTGTTCCTGTGTCTCGCGCGAAATCGCGGTT TTAGTGACGTGGAGTTTTTTTCTTTCTTGTCGTTTGGCAGGAAATGGGAG ATTTGCTGACAGTCTCGCGGTTCTCGGGGGTGTTCCTGCTCATCATGTAC GTGCAGCTCCTCATCTTTCAGGTGAGTTTTCGCCACTGGGTTTTCTTTCC TTCCTTCCCCCTTGCGCCTGAGAGGGGATCGAAGCACAACTGAACGCCAA GCCTGTTGCGAGAGAGTGGTGGGACTTGAGCAACGGACGCAAGCTGTCTC CCCCGTTTATCCGAGGCATGCATACGAGGATGGATGCTCAAGCAAGGGTA TCTCTTTTGTGGCTGCCCGGCCCCAAAGAGATAGTCCTCGCTTGATGGAG CGCACCCATCCCGTTTGCACTTCGGGGTGAAACAGGCTAGACAGCTTGCG TCCGTTGCTGAAGCGCGTGATCACGCCCACACACGGTGCGTTGCTCCGGC CATGAGCTGCCGTATTCTATAAGGTTTGCTGTGGAGCAGCAGGCATCCCA TGCGGGAGTGGTGTGGCGTCAGCAACGGACGTGCAAACGAGCATGCTCAA GCAAGGACGTAAGGACATCCCTTGGGGCGAAAAACTAGAAGTACGGCAGA TCATGGGCGGAACAGCGCACCTTGTGTGTACGTGTTCGTGTGCTTCAGCA ACGGACGCAACATGTCTCGCCTGTTTCACCCTGACGTGCAAACGAGGATG GGTGCTCCATCAAGCGAGGACTATCTCTTTGGGATGCCCCGAAGATAAAG CCTTGCTTTGTCGAGCATCCATCGTCGTTTGCATTTCAGGGTGAAACAGG CAAGACAGCTTGAAGGACATGCCCCAAAGAGATACTACTTGCTTGATGGA GTATCCATTGTCGTTCGCATGTCAGGTTGAACCAGGCGAGGCAGCTTGCG TCCGTTGCTGAAACAGATGAACACATACACACACATCCTGGAGTTCGTTT TTTTATTTCTCTTAAATTCACGCCCAAGCTTTATCATCTGGCCGCCGACA CGTTTTTTCTTACAGTTCAAGACCCACGAGCCTATCCCGTTTATGTTTTG TGTCCCGCTTCAATGCACACTCACGCTTTTTCATCTGGCTGCCGACACGT TTTTTTCACGTCTTGTTTATTTCTTACGCTTCAAGACCCACGCCTATCTG CTCGCGAACACCGACGACCGCTTAAGCTCACACCCGCGCTTGTCACCTGC GTCACACGTGTTATTGTTCACCCCCGTTTTTTTTTACTTATTTTTCTTAC AGTTCAAGACCCACGCCTATCTGTTCGCCAGCACCGACGAGGACGGCACG AACCTCAAGCTGGGCACGTCGCTCGTGGGCCTGGTGGTGATCACGGGCCT CGTGGCTTGGCTGTCGGAGTTCCTGGTGGACGCCATCGACGGTTTCACGG AGGAGGTATGCACGTTTTTTATTGCGAGGGTACCCGCACGTAGGTGCGTC GAACAAACAACATGTGTGGTATCCTCCGGCAATTTGATGGTTACCTCGGT CCAGATGATAAGAGATGCGTATTTGCGTTGATAGAAAAAAGTGATGGCGA AAAACGAGCGCGTCAAAAGGTTGTACCGCACGTTTTGTCAACGAGGCCGA AGCGAATAAGCCATCCATTCGTGGAGAACATTGAGAAAAGCTGCACCTCG AGTGTCAGTGTTCGGTATGTTGGCAACTCATTCGGACTGGTCCTCGCACG ACGTTCAGGTGGGTAGATTGCTTCCCTGTCGCCGGTAGATTCGCCGCTGG TGATATGCTTTTTAATGTTTTTATCCTTTCTCTTGGAGATCCCCCCCCCC CCCCCCGCTGTTCTTCACGCATTTCGTGACCCTGCTCTACCTCTTGTTCT TTCTACGGCCGCCGCGCTTGGCGCAAAAGGCACACCTGTCCAAGTCGTTC GTGGGCCTAATCCTGCTGCCAATCATCGGGAACGCTGTGGAGCACATCAC GGCCATCACGGTGGCCATGAAGGTAAAATGGAATCTT
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig10205:573..4659-

>mRNA_Ecto-sp9_F_contig10205.233.1 ID=mRNA_Ecto-sp9_F_contig10205.233.1|Name=mRNA_Ecto-sp9_F_contig10205.233.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1536bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10205:573..4659- (Ectocarpus species9 EcSCA_722f female)
GTTGTCCAGATCTTCGTGCCGGCGGGCTTTGCCGTGAAATGGTTAGGGTG
CTCGGAAACGACAATCTTCGTCGTTAACTTCTTGGCTATGGTGGTTGTCC
AGATCTTCGTGCCGGCGGGCTTTGCCGTGAAATGGTTAGGGTGCTCGGAA
ACGACAATCTTCGTCGTTAACTTCTTGGCTATGGTGCCCCTCGCCAGCAT
TCTGGGGGACTTCACGGAGGAGGTGTCGGCGCACACCAACCAGACGCTCG
GCGGGCTCATCCAGGCGACGCTGGGAAACGCGGTCGAGATTGTGGTGTCC
ATCCAGGCTCTCTACGCGAACCAGATTCGGGTGGTACAGCCCCTCGCCAG
CATTCTGGGGGACTTCACGGAGGAGGTGTCGGCGCACACCAACCAGACGC
TCGGCGGGCTCATCCAGGCGACGCTGGGAAACGCGGTCGAGATTGTGGTG
TCCATCCAGGCTCTCTACGCGAACCAGATTCGGGTGGTACAGGCTTCGTT
GCTCGGATCGGTGTTCTCGAACATGCTGCTGGTTCTCGGCTGCTGTTTCT
TCTTCGGCGGGCTCAAGCACAAGGAGCAGCGCTTCAACTCCACCAGCGCG
ATCGCCAACATGAGCCTGCTCCTGCTTTCCTCGCTGGCCCTGGTCTTGCC
GACACCTCTTTCGCACGCCGCGGCTTCGTTGCTCGGATCGGTGTTCTCGA
ACATGCTGCTGGTTCTCGGCTGCTGTTTCTTCTTCGGCGGGCTCAAGCAC
AAGGAGCAGCGCTTCAACTCCACCAGCGCGATCGCCAACATGAGCCTGCT
CCTGCTTTCCTCGCTGGCCCTGGTCTTGCCGACACCTCTTTCGCACGCCG
CGGAAATGGGAGATTTGCTGACAGTCTCGCGGTTCTCGGGGGTGTTCCTG
CTCATCATGTACGTGCAGCTCCTCATCTTTCAGGAAATGGGAGATTTGCT
GACAGTCTCGCGGTTCTCGGGGGTGTTCCTGCTCATCATGTACGTGCAGC
TCCTCATCTTTCAGTTCAAGACCCACGCCTATCTGTTCGCCAGCACCGAC
GAGGACGGCACGAACCTCAAGCTGGGCACGTCGCTCGTGGGCCTGGTGGT
GATCACGGGCCTCGTGGCTTGGCTGTCGGAGTTCCTGGTGGACGCCATCG
ACGGTTTCACGGAGGAGTTCAAGACCCACGCCTATCTGTTCGCCAGCACC
GACGAGGACGGCACGAACCTCAAGCTGGGCACGTCGCTCGTGGGCCTGGT
GGTGATCACGGGCCTCGTGGCTTGGCTGTCGGAGTTCCTGGTGGACGCCA
TCGACGGTTTCACGGAGGAGGCACACCTGTCCAAGTCGTTCGTGGGCCTA
ATCCTGCTGCCAATCATCGGGAACGCTGTGGAGCACATCACGGCCATCAC
GGTGGCCATGAAGGTAAAATGGAATCTTGCACACCTGTCCAAGTCGTTCG
TGGGCCTAATCCTGCTGCCAATCATCGGGAACGCTGTGGAGCACATCACG
GCCATCACGGTGGCCATGAAGGTAAAATGGAATCTT
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