mRNA_Ecto-sp9_F_contig1018.211.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig1018.211.1
Unique NamemRNA_Ecto-sp9_F_contig1018.211.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig1018.211.1 vs.
Match: Cytosine-C5 (specific DNA methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6U6_ECTSI)

HSP 1 Score: 792 bits (2045), Expect = 2.190e-287
Identity = 398/412 (96.60%), Postives = 401/412 (97.33%), Query Frame = 1
Query:    1 MHSFHAAAVCLSIVQASGFASTAHYHRPHSQRPGSHALGATGVLEEPPRADPLVALEFYSGIGGLRVSLEKALEAVSLETSVGSFEISSVANSVYEHNFPGCSVTRRSIEHLSAQDIEVDADIWLLSPPCQPFCRVGNKMDEQDNRSVSFLHLLSLLKTIRTPPSFLFLENVQGFEGSHAHLRLLETLTARGFDVEQYLLSPNQLGIPNSRLRYYCLARRRNADGKGEATDVKKSLPQDVAAVPSRPLSEYLDPSLYGEAAVPLLLSPKACSHANPSLRFDVVTLQSTETTTFTKGYRKHAGRAGPVVLLTDDGGRRVSGEKLGRFPSGLDLGPEGKEVRWFSDREMLRLHGFPEAFDFPTAVTPRQRCALVGNSVNVEVVALLLEFMLFEENARGDWGERFRAEQRRVSTV 1236
            MHSF AAAVCLSIVQASGFASTAHYHRPH QRPGSHALGATGVL EPPRADPLVALEFYSGIGGLRVSLEKALEAVSLETSVGSFEISSVANSVYEHNFPGCSVTRRSIEHLSAQDIEVDADIWLLSPPCQPFCRVGNKMDEQDNRSVSFLHLLSLLKTIRTPPSFLFLENVQGFEGSHAHLRLLETL ARGFDVEQYLLSPNQLGIPNSRLRYYCLARRRNADG GEATDVKKS PQDVAAVP RPLS+YLDPSLYGEAAVPLLLSPKACSHANPSLRFDVVTLQSTETTTFTKGYRKHAGRAGPVVLLTDDG RRVSGEKLGRFPSGLDLGPEGKEVRWFSD EMLRLHGFPEAFDFPTA+TPRQRCALVGNSVNVEVVALLLEFMLFE NA GDWGERFRAEQR+VSTV
Sbjct:    1 MHSFRAAAVCLSIVQASGFASTAHYHRPHPQRPGSHALGATGVLVEPPRADPLVALEFYSGIGGLRVSLEKALEAVSLETSVGSFEISSVANSVYEHNFPGCSVTRRSIEHLSAQDIEVDADIWLLSPPCQPFCRVGNKMDEQDNRSVSFLHLLSLLKTIRTPPSFLFLENVQGFEGSHAHLRLLETLIARGFDVEQYLLSPNQLGIPNSRLRYYCLARRRNADGMGEATDVKKSFPQDVAAVPLRPLSKYLDPSLYGEAAVPLLLSPKACSHANPSLRFDVVTLQSTETTTFTKGYRKHAGRAGPVVLLTDDGERRVSGEKLGRFPSGLDLGPEGKEVRWFSDGEMLRLHGFPEAFDFPTALTPRQRCALVGNSVNVEVVALLLEFMLFEGNAPGDWGERFRAEQRQVSTV 412          
BLAST of mRNA_Ecto-sp9_F_contig1018.211.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAF5_9PHAE)

HSP 1 Score: 358 bits (918), Expect = 5.830e-119
Identity = 182/208 (87.50%), Postives = 191/208 (91.83%), Query Frame = 1
Query:  613 LGIPNSRLRYYCLARRRNADGKGEATDVKKSLPQDVAAVPSRPLSEYLDPSLYGEAAVPLLLSPKACSHANPSLRFDVVTLQSTETTTFTKGYRKHAGRAGPVVLLTDDGGRRVSGEKLGRFPSGLDLGPEGKEVRWFSDREMLRLHGFPEAFDFPTAVTPRQRCALVGNSVNVEVVALLLEFMLFEENARGDWGERFRAEQRRVSTV 1236
            L I ++RLRYYCLARRRNADGK EATDVK+SLPQD+AAVP        DPSL GEAAVPLLLSPKACSHANPSLRFDVVTLQST+TTTFTKGYRKHAGRAGPVVLLTDDG RRVSGEKLGRFPSGLDL  EGKEVRWFSDREMLRLHGFPEAFDFPT++T RQRCALVGNSVNVEVVALLLEFMLFE+NARGDWGERFR EQR+VSTV
Sbjct:   35 LNINDTRLRYYCLARRRNADGKREATDVKESLPQDMAAVPC-------DPSLCGEAAVPLLLSPKACSHANPSLRFDVVTLQSTKTTTFTKGYRKHAGRAGPVVLLTDDGERRVSGEKLGRFPSGLDLKTEGKEVRWFSDREMLRLHGFPEAFDFPTSLTLRQRCALVGNSVNVEVVALLLEFMLFEDNARGDWGERFRPEQRQVSTV 235          
BLAST of mRNA_Ecto-sp9_F_contig1018.211.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE46_9PHAE)

HSP 1 Score: 308 bits (790), Expect = 1.930e-100
Identity = 150/159 (94.34%), Postives = 154/159 (96.86%), Query Frame = 1
Query:  280 VYEHNFPGCSVTRRSIEHLSAQDIEVDADIWLLSPPCQPFCRVGNKMDEQDNRSVSFLHLLSLLKTIRTPPSFLFLENVQGFEGSHAHLRLLETLTARGFDVEQYLLSPNQLGIPNSRLRYYCLARRRNADGKGEATDVKKSLPQDVAAVPSRPLSEYL 756
            VYEHNFPGCS+TRRSIEHLSAQDIEVDADIWLLSPPCQPFCRVGNKMDEQDNRSVSFLHLLSLLKTIR PPSFLFLENVQGFEGSH H RLLETLTARGFDVEQYLLSP+QLGIPNSRLRYYCLARRRNADGK EATDVK+SLPQD+AAVP RPLSEYL
Sbjct:    3 VYEHNFPGCSLTRRSIEHLSAQDIEVDADIWLLSPPCQPFCRVGNKMDEQDNRSVSFLHLLSLLKTIRKPPSFLFLENVQGFEGSHTHRRLLETLTARGFDVEQYLLSPSQLGIPNSRLRYYCLARRRNADGKREATDVKESLPQDMAAVPLRPLSEYL 161          
BLAST of mRNA_Ecto-sp9_F_contig1018.211.1 vs.
Match: Uncharacterized (protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4H2G5_VITBC)

HSP 1 Score: 228 bits (580), Expect = 5.770e-66
Identity = 141/389 (36.25%), Postives = 211/389 (54.24%), Query Frame = 1
Query:  157 LVALEFYSGIGGLRVSLEKALEAVSLETS-VGSFEISSVANSVYEHNFPGCSVTRRSIEHLSAQDIEVDADIWLLSPPCQPFCRVGNKMDEQDNRSVSFLHLLSLLKTIRTPPSFLFLENVQGFEGSHAHLRLLETLTARGFDVEQYLLSPNQLGIPNSRLRYYCLARRRNADGKGEATDVKKSLPQDVAAVPSRPL-------SEYLDPSLYGEAAVPLLLSPKACSHANPSLRFDVVTLQSTETTTFTKGYRKHAGRAGPVVLLTDDG----------------GRRVSGEKLGRFPSGL----------------------------DLGPEGKEVRWFSDREMLRLHGFPEAFDFPTAVTPRQRCALVGNSVNVEVVALLLEFML 1167
            L   E +SGIGGL ++++ A + V +    V +F+++++AN VY HNF G    +  IE LSA + +  AD+WL+SPPCQP+ R G ++D +D R+   LHL  ++K +  PP  LFLENV+ FE S +H RL++ L ++ + +EQ++++P+QLGIPN+R+RYYC+A R + D   EA+   +S+  ++ AV  R +        +Y++    G     LL+     +  N +  FDV    +  TTTFTKGY ++ GRAGP++L    G                G  V   +  R    L                            D   E    R+FS REMLR+HGFPE F FP  VT RQ+  L+GNS+++ VVA LL++ L
Sbjct:    8 LRVFELFSGIGGLHLAIKDAAQRVGIPFRLVKAFDVNTIANQVYLHNF-GMQPQQGLIEPLSASEFDGRADVWLMSPPCQPYTRGGKQLDAEDTRAAGLLHLCDIIKELAHPPRLLFLENVRCFEKSQSHKRLMDALHSQHYAIEQFIVTPSQLGIPNTRVRYYCIAIR-SRDLTPEASPGVESMAFEMPAVDGREIPADMGRVGDYVERK--GRHLADLLIDRNVFTK-NETFLFDVACEDTRATTTFTKGYGRNEGRAGPILLCDRQGRPLPSYPPAQQTIQVNGPSVDSPEDCRIDGTLVSMETYRHVIDTHVLDTRRFRCVCVSCDDEAAECVRYRYFSPREMLRVHGFPEKFAFPACVTTRQQYGLIGNSISIPVVAHLLQYAL 391          
BLAST of mRNA_Ecto-sp9_F_contig1018.211.1 vs.
Match: S-adenosyl-L-methionine-dependent (methyltransferase n=1 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1WKJ2_9FUNG)

HSP 1 Score: 212 bits (540), Expect = 1.230e-60
Identity = 144/371 (38.81%), Postives = 206/371 (55.53%), Query Frame = 1
Query:  151 DPLVALEFYSGIGGLRVSLEKALEAVSLETSVG-SFEISSVANSVYEHNFPGCSVTRRSIEHLSAQDIE-VDADIWLLSPPCQPFCRVGNKMDEQDNRSVSFLHLLSLLKTIRTPPSFLFLENVQGFEGSHAHLRLLETLTARGFDVEQYLLSPNQLGIPNSRLRYYCLARRRNADGKGE------------ATDVKKSLP-----QDVAAVPSRPLSEYLDPSLYGEAAVPLLLSPKACSHANPSLRFDVVTLQSTETTTFTKGYRKHAGRAGPVVLLTDDGGRRVSGEKLGRFPSGLDLGPEGKEVRWFSDREMLRLHGFP-EAFD-----------FPTAVTPRQRCALVGNSVNVEVVALLLEFMLF 1170
            DP+V LEF+SGIGGL    E++     +  +V  +F+++  AN+VYEHNF G     R+I++L   DI+   A+ WLLSPPCQP+ R G  +D++D+R+   +HL+ +L  +R  P ++FLENV  FE S +  RL+ETL   GF+V + L+SP Q+G+PN+RLRY+ +A+RR A    E            A  V K  P     + + AV + PLS Y+D SL    AV  L  P++       L FD+V   S +T+TFTK Y          +L T +    V     G     LDLG     +R+FS +E+  LH FP  A D           FP ++T RQ+  L+GNS+NV+VVA L+  +LF
Sbjct:    3 DPVVCLEFFSGIGGLHYGFEQS----GIPGTVAMAFDMNENANTVYEHNF-GLRPNNRAIDYLETADIDKYSANCWLLSPPCQPYTRGGKYLDDEDDRARGLIHLIEMLPKLRNVPRYVFLENVMNFENSQSRTRLVETLGTLGFEVNECLVSPVQMGVPNNRLRYFLIAQRRWAADDVENAARTTKYLARGADAVHKDWPFGPAVKSIDAVCAIPLSSYIDASL---DAVESLRVPQSAILKRQRLEFDIVRASSAQTSTFTKSYGSRNLIGSGSLLQTRN--LDVVENGFGAPERLLDLG-----IRFFSPKEVALLHHFPYRAADSPVADGRHYLGFPASLTQRQQLQLLGNSLNVKVVAELIRHILF 358          
BLAST of mRNA_Ecto-sp9_F_contig1018.211.1 vs.
Match: Hypothetical (protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4PZZ6_9DINO)

HSP 1 Score: 217 bits (553), Expect = 1.600e-60
Identity = 153/392 (39.03%), Postives = 208/392 (53.06%), Query Frame = 1
Query:   85 HSQRPGSHALGATGVLEEPPRADPLVALEFYSGIGGLRVSLEKA--LEAVSLET--SVGSFEISSVANSVYEHNF--PGCSVTRRSIEHLSAQDIEVDADIWLLSPPCQPFCRVGNKMDEQDNRSVSFLHLLSLLKTIRTPPSFLFLENVQGFEGSHAHLRLLETLTARGFDVEQYLLSPNQLGIPNSRLRYYCLARRRNADGKGEATDVKKSLPQDVAAVPS-------RPLSEYLDPSLY--GEAAVPLLLS-PKACSHANPSLR--FDVVTLQSTETTTFTKGYRKHAG---RAGPVVLLTDDGGRRVS-GEKLGRFPSG--LDLGPEGKEVRWFSDREMLRLHGFPEAFDFPTAVTPRQRCALVGNSVNVEVVALLLEFMLFEENARG 1188
            H   PGS  +G    L           LE +SGIGGLR + E A  L   +L         E S +AN VY  NF  P   +    +  L  ++++  AD+WLLSPPCQPF RVG K+D  D R+   LHL  LL  +R PP  L LENV GFE S +  R  + LT  G++V Q+ LSP QLGIPN R R Y LARR    G G+   +++  P   AA  +       R L++YL+PSL   G  ++P  L  P+A        R  ++VV  +ST ++TFT GYR       R GP++ L     R+ S G+K    P G  L L    + VR+F+  E+LR+ GFP+ F FP  +T +    L+G+S+NV+VVA L+  +LFE  + G
Sbjct:  167 HGNSPGSGRVGGLSDLR---------VLEIFSGIGGLRAAFECACRLAGTALRPLREWVPVEASHMANGVYAQNFALPYPPLLPCDVRTLEPENVD-GADLWLLSPPCQPFTRVGRKLDTADQRAAPLLHLAGLLPRLRRPPEALLLENVVGFEASESWQRTADVLTTSGYEVRQFSLSPLQLGIPNRRPRVYVLARRSAGGGSGQLHALEEHFPGAAAAASAGLASAAPRTLADYLEPSLRDAGLDSLPEALRVPEAMLERQWQFRRRWEVVGPESTSSSTFTSGYRADCPDVHRFGPLLRLGTSATRQASIGDKF--LPGGRELRLVHPHETVRFFTPGELLRIAGFPDGFTFPAELTTKAHYKLIGDSINVDVVAHLIHHLLFEWTSLG 546          
BLAST of mRNA_Ecto-sp9_F_contig1018.211.1 vs.
Match: Predicted (protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9SWH2_PHYPA)

HSP 1 Score: 207 bits (527), Expect = 1.150e-58
Identity = 139/376 (36.97%), Postives = 206/376 (54.79%), Query Frame = 1
Query:  154 PLVALEFYSGIGGLRVSLEKA-LEAVSLETSVGSFEISSVANSVYEHNFPGCSVTRRSIEHLSAQDIEV-DADIWLLSPPCQPFCRVGNKMDEQDNRSVSFLHLLSLLKTIRTPPSFLFLENVQGFEGSHAHLRLLETLTARGFDVEQYLLSPNQLGIPNSRLRYYCLARRRNADGKGEATDVKKSLPQDVAAVPSRPLSE-YLDPSLYGEAAVPLLLSPKACSHAN-------------------PSLR-------FDVVTLQSTETTTFTKGYRKHAGRAGPVV-----LLTDDGGRRVSGEKLGRFPSGLDLGPEGKEVRWFSDREMLRLHGFPEAFDFPTAVTPRQRCALVGNSVNVEVVALLLEFMLFEEN 1179
            P+  LEFYSGIGGLR SL++A +EAV +E    +F+I+ VAN VYEHNF G   ++R+I+ L+   ++   AD W++SPPCQP+ R G + D  D R+ SFL +L +L  ++ PP+++ +ENV GFE S  H  L++     GF  ++++LSP QLGIP SR RY+CLA+++       A +   SL  ++  +P   ++E  +DP +Y    V   +  + C+  N                   PS         FD+VT  S     FTK Y  +A   G V+     L+T D             P G+ L   G  +R+F+ RE+  LH FP  F FP+ V+ +QR AL+GNS++V VV +LL ++  E N
Sbjct:    7 PMRVLEFYSGIGGLRYSLQEAGVEAVVVE----AFDINEVANDVYEHNF-GHRPSQRNIQRLTVSQLDAYKADTWIMSPPCQPYTRQGLRKDAGDARAFSFLQMLEMLPQMKFPPNYILVENVVGFEDSITHGHLIDMFEDLGFMTQEFILSPLQLGIPYSRPRYFCLAKKKPKSFVQPAYN--NSLLCELGPLPLLKMNEPIIDPGVYCRP-VSDFMEEEPCTSDNLGKCFDMNMCADKWELYKLPSSVLERWGDCFDMVTKDSKRCCCFTKSYGSYAKGTGSVLSTKKALMTQD------------LPEGVSLNSLG--LRYFTPREVANLHSFPPEFSFPSQVSLKQRYALLGNSLSVAVVGVLLRYLFSEPN 360          
BLAST of mRNA_Ecto-sp9_F_contig1018.211.1 vs.
Match: DNA ((Cytosine-5-)-methyltransferase n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0TAA1_ALLM3)

HSP 1 Score: 209 bits (531), Expect = 2.390e-58
Identity = 148/424 (34.91%), Postives = 209/424 (49.29%), Query Frame = 1
Query:  139 PPRADPLVALEFYSGIGGLRVSLEKALEAVSLETSVGSFEISSVANSVYEHNFPGCSVTRRSIEHLSAQDI-EVDADIWLLSPPCQPFCRVGNKMDEQDNRSVSFLHLLSLLKTIRTPPSFLFLENVQGFEGSHAHLRLLETLTARGFDVEQYLLSPNQLGIPNSRLRYYCLARRRNAD------GKGEATD----------------------------------VKKSLPQDVAA------VPSRPLSEYLDPSLYGEAAVPLLLSPKA----------CSHANPSLR------FDVVTLQSTETTTFTKGY-RKHAGRAGPVVLLTDDGGRRVSGEKLGRFPSGLDLGPEGKEVRWFSDREMLRLHGFPEAFDFPTAVTPRQRCALVGNSVNVEVVALLLEFMLFEEN-ARGDWGERFRAE 1215
            PP    + A+EF+SG GGL      A    ++   V +F++++VAN  Y HNFP   V+  SIE+L+A D+ +++AD WLLSPPCQPF R G  +D  D RS   LHL+SLL T   PP ++FLENV+ FE S     L+  L ARGF++ + LL P  LG+PNSRLRY+ LARRR ++      G GE                                     VK+S+  D  A      +      +  DP    +A   + + P A          C+   P +R      FD+V+ +   + TFTK Y  KH   +GP +    +    ++ + LG     L L P     R+FS  E+ RLH FP    FP+ VT  Q+  L+GNS+NV+VV  L++ +  EE+   G+ G    AE
Sbjct:   12 PPTRPAIRAIEFFSGFGGLHYGFTYAQVPGAV---VAAFDVNAVANQCYAHNFPSTPVSTASIEYLTANDLAKLNADAWLLSPPCQPFTRGGKGLDHADARSRGLLHLVSLLTTSLHPPRYVFLENVKNFETSECRRILVNALAARGFEIAECLLEPTALGVPNSRLRYFLLARRRVSEDAAGEGGNGEEVGAYSDRGVVQTAWPVRFRVVKDEDDQAAGDENPAAVKESVTSDAGANSTVETLTDTHTDDKHDPPRSADATPAVPVDPIAKYLDAEPDPQCAVPEPWIRQSKKFVFDIVSDRGARSATFTKAYGSKHVFGSGPFLASVPES--LLTKDVLGNVEQVLALKP-----RFFSPTEVARLHCFPADMTFPSGVTKAQQYRLLGNSLNVKVVGELMKVLFAEEDDVEGEVGPTLEAE 425          
BLAST of mRNA_Ecto-sp9_F_contig1018.211.1 vs.
Match: DNA (methyltransferase 2, putative n=2 Tax=Eimeria TaxID=5800 RepID=U6KNY2_EIMTE)

HSP 1 Score: 210 bits (535), Expect = 3.720e-58
Identity = 161/494 (32.59%), Postives = 222/494 (44.94%), Query Frame = 1
Query:  154 PLVALEFYSGIGGLRVSLEKALEAVSLETSVGSF--------EISSVANSVYEHNFPGCSVTRRSIEHLSAQDIEVDADIWLLSPPCQPFCRVGNKMDEQDNRSVSFLHLLSLLKTIRTPPSFLFLENVQGFEGSHAHLRLLETLTARGFDVEQYLLSPNQLGIPNSRLRYYCLARRRNADGKG---------------------------EATDVK-------KSLPQDV------------AAVPSRPLSEYLDPSLYG---------------------------------------------------EAAVPLLLSPKACSHA----NPSLRFDVVTLQSTETTTFTKGYRKHAGRAGPVVLLTDD----GGRRVSGEKLGRFPSGLD-----------------------------LGPE------------GKEVRWFSDREMLRLHGFPEAFDFPTAVTPRQRCALVGNSVNVEVVALLLEFMLFE 1173
            PL  +EF+SGIGGLRV L +A EA+  +  VGSF        ++S+ AN VY HNF    +   SIEHLS Q ++  A +WLLSPPCQP+ R G K+D QD R+  FLHLL LL +  +PP F+FLENV+GFEGS     +   L  + + V+ +LLSP Q+GIPN+R+RYYCLA R     K                            EA +V        + +P D+            AA   R + E+L+ ++                                                     E  + L    K  S+     N   R ++V+  ST + TFTKGY ++    GP++L+ ++    GGR  + E                                       L P+            G  VR+FS RE+LRLHGFPE F FP ++  R++ ALVGNSVNV+VVALLL+ +L +
Sbjct:   28 PLRVIEFFSGIGGLRVGLVEAGEALR-QRGVGSFAAEFVAAYDVSTTANGVYAHNFSSKPICA-SIEHLSLQQVDGKAQLWLLSPPCQPYTRGGKKLDMQDGRATGFLHLLQLLDSCASPPQFIFLENVRGFEGSDTWHCMQRVLLRKHYSVQHFLLSPTQIGIPNTRVRYYCLATRHTDLPKQQQXXXXXXXXXXQTGLKXXXXXXXXAPEAPEVSALGAAGLQLIPPDLNTEWNPRSPVTSAAPRLRRVGEFLEKNISAAEWEALRVPADRLTRFLESEAEAAXXXXXXXXXXXAEDSANSEFNKKEESTEXXMELNQRKKRNSNTQQKFNNGFRLELVSPSSTASGTFTKGYGRNLHSGGPLLLICEEDQPSGGREAAAEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVLRPDTLERRRFRRLRAGDSVRFFSSRELLRLHGFPETFSFPPSLPFRKKAALVGNSVNVKVVALLLQHLLHQ 519          
BLAST of mRNA_Ecto-sp9_F_contig1018.211.1 vs.
Match: Uncharacterized (protein n=4 Tax=Batrachochytrium dendrobatidis TaxID=109871 RepID=F4P7W1_BATDJ)

HSP 1 Score: 204 bits (518), Expect = 1.640e-57
Identity = 133/364 (36.54%), Postives = 196/364 (53.85%), Query Frame = 1
Query:  154 PLVALEFYSGIGGLRVSLEKALEAVSLETSVGSFEISSVANSVYEHNFPGCSVTRRSIEHLSAQDIE-VDADIWLLSPPCQPFCRVGNKMDEQDNRSVSFLHLLSLLKTIRTPPSFLFLENVQGFEGSHAHLRLLETLTARGFDVEQYLLSPNQLGIPNSRLRYYCLARRRNA--DGKGEATDVKKS-----LPQDVAAVPSRPLSEYLDPSLYGEAAVPLLLSPKACSHANPSLRFDVVTLQSTETTTFTKGYRKH--AGRAGPVVLLTDDGGRRVSGEKLGRFPSGLDLGPEGKEVRWFSDREMLRLHGFP------------EAFDFPTAVTPRQRCALVGNSVNVEVVALLLEFMLFEEN 1179
            PL  LEF+SGIGGL   LE+A    S  T + SF+++  ANS Y+HNF G   + +SI+ L+A+DIE  D++ WLLSPPCQPF + G  +D QDNRS++ L ++ +L+ I  PP F+F+ENV  FE S    RL++TL    +DV++YL+SP Q+GI N R RYY  A+ R++   GK   + ++ S     L  + + + + P+   +   L     +P  L P+       + RFD+V    T  + FTK Y  H   G    +     D   RV      R              R+F+ RE+ RLHGFP              F+FP +V   Q+  L+GNS++V+VVA LL+ +  + +
Sbjct:    4 PLRVLEFFSGIGGLHYGLERA---ESTATVLASFDVNEHANSCYQHNF-GIKPSNKSIDTLTAKDIEKYDSNCWLLSPPCQPFTQGGKSLDHQDNRSLALLRIIEILQHIAIPPRFVFVENVPNFETSECRSRLVQTLDQCNYDVKEYLISPIQIGISNDRRRYYLAAKLRSSISTGKSNLSCLQTSHMITRLDSESSGI-ALPIPPAISTYLEQHCDIPEFLVPEQYILKRKTFRFDLVKPTDTRCSCFTKAYGSHHIIGSGSFLQTANLDVSSRVFAIVASR-------------PRFFTPREIARLHGFPIDGVLNGSIGMLHTFEFPDSVPRSQQYKLLGNSLSVDVVAHLLKLLFLDSD 349          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1018.211.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Cytosine-C52.190e-28796.60specific DNA methyltransferase n=1 Tax=Ectocarpus ... [more]
Uncharacterized5.830e-11987.50protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.930e-10094.34protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized5.770e-6636.25protein n=2 Tax=Vitrella brassicaformis TaxID=1169... [more]
S-adenosyl-L-methionine-dependent1.230e-6038.81methyltransferase n=1 Tax=Linderina pennispora Tax... [more]
Hypothetical1.600e-6039.03protein n=1 Tax=Alexandrium monilatum TaxID=311494... [more]
Predicted1.150e-5836.97protein n=1 Tax=Physcomitrium patens TaxID=3218 Re... [more]
DNA2.390e-5834.91(Cytosine-5-)-methyltransferase n=1 Tax=Allomyces ... [more]
DNA3.720e-5832.59methyltransferase 2, putative n=2 Tax=Eimeria TaxI... [more]
Uncharacterized1.640e-5736.54protein n=4 Tax=Batrachochytrium dendrobatidis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1018contigEcto-sp9_F_contig1018:311..3333 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score793.9
Seed ortholog evalue3.6e-227
Seed eggNOG ortholog2880.D7G6U6
KEGG rclassRC00003,RC00332
KEGG koko:K00558,ko:K15336
KEGG ReactionR04858
KEGG Pathwayko00270,ko01100,ko05206,map00270,map01100,map05206
KEGG ModuleM00035
EggNOG free text desc.tRNA methyltransferase activity
EggNOG OGsCOG0270@1,KOG0919@2759
EC2.1.1.204,2.1.1.37
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko02048,ko03016,ko03032,ko03036
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptiontRNA (cytosine-5-)-methyltransferase
Ec32 orthologEc-01_012190.1
Exons5
Model size1517
Cds size1239
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1018.211.1prot_Ecto-sp9_F_contig1018.211.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig1018 589..3333 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928213.0854106-UTR-Ecto-sp9_F_contig1018:310..5881622928213.0854106-UTR-Ecto-sp9_F_contig1018:310..588Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1018 311..588 -
1692277797.4091349-UTR-Ecto-sp9_F_contig1018:310..5881692277797.4091349-UTR-Ecto-sp9_F_contig1018:310..588Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1018 311..588 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928213.1003299-CDS-Ecto-sp9_F_contig1018:588..10711622928213.1003299-CDS-Ecto-sp9_F_contig1018:588..1071Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1018 589..1071 -
1692277797.4193826-CDS-Ecto-sp9_F_contig1018:588..10711692277797.4193826-CDS-Ecto-sp9_F_contig1018:588..1071Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1018 589..1071 -
1622928213.1108763-CDS-Ecto-sp9_F_contig1018:1479..16771622928213.1108763-CDS-Ecto-sp9_F_contig1018:1479..1677Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1018 1480..1677 -
1692277797.427234-CDS-Ecto-sp9_F_contig1018:1479..16771692277797.427234-CDS-Ecto-sp9_F_contig1018:1479..1677Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1018 1480..1677 -
1622928213.1245298-CDS-Ecto-sp9_F_contig1018:2042..22201622928213.1245298-CDS-Ecto-sp9_F_contig1018:2042..2220Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1018 2043..2220 -
1692277797.4352095-CDS-Ecto-sp9_F_contig1018:2042..22201692277797.4352095-CDS-Ecto-sp9_F_contig1018:2042..2220Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1018 2043..2220 -
1622928213.1369214-CDS-Ecto-sp9_F_contig1018:2497..25981622928213.1369214-CDS-Ecto-sp9_F_contig1018:2497..2598Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1018 2498..2598 -
1692277797.4479892-CDS-Ecto-sp9_F_contig1018:2497..25981692277797.4479892-CDS-Ecto-sp9_F_contig1018:2497..2598Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1018 2498..2598 -
1622928213.1520035-CDS-Ecto-sp9_F_contig1018:3054..33331622928213.1520035-CDS-Ecto-sp9_F_contig1018:3054..3333Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1018 3055..3333 -
1692277797.460854-CDS-Ecto-sp9_F_contig1018:3054..33331692277797.460854-CDS-Ecto-sp9_F_contig1018:3054..3333Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1018 3055..3333 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig1018.211.1

>prot_Ecto-sp9_F_contig1018.211.1 ID=prot_Ecto-sp9_F_contig1018.211.1|Name=mRNA_Ecto-sp9_F_contig1018.211.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=413bp
MHSFHAAAVCLSIVQASGFASTAHYHRPHSQRPGSHALGATGVLEEPPRA
DPLVALEFYSGIGGLRVSLEKALEAVSLETSVGSFEISSVANSVYEHNFP
GCSVTRRSIEHLSAQDIEVDADIWLLSPPCQPFCRVGNKMDEQDNRSVSF
LHLLSLLKTIRTPPSFLFLENVQGFEGSHAHLRLLETLTARGFDVEQYLL
SPNQLGIPNSRLRYYCLARRRNADGKGEATDVKKSLPQDVAAVPSRPLSE
YLDPSLYGEAAVPLLLSPKACSHANPSLRFDVVTLQSTETTTFTKGYRKH
AGRAGPVVLLTDDGGRRVSGEKLGRFPSGLDLGPEGKEVRWFSDREMLRL
HGFPEAFDFPTAVTPRQRCALVGNSVNVEVVALLLEFMLFEENARGDWGE
RFRAEQRRVSTV*
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mRNA from alignment at Ecto-sp9_F_contig1018:311..3333-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig1018.211.1 ID=mRNA_Ecto-sp9_F_contig1018.211.1|Name=mRNA_Ecto-sp9_F_contig1018.211.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=3023bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1018:311..3333- (Ectocarpus species9 EcSCA_722f female)
ATGCACTCGTTCCATGCTGCGGCGGTTTGCCTTTCGATTGTCCAAGCATC CGGGTTTGCATCTACTGCTCACTACCATCGGCCGCATTCACAGCGACCAG GAAGTCATGCGCTGGGAGCGACCGGCGTCCTCGAGGAACCCCCACGAGCG GATCCCTTGGTGGCCTTAGAGTTTTATAGTGGGATAGGTGGGCTGCGCGT ATCCCTGGAGAAAGCATTAGAGGCGGTCAGCCTTGAAACAAGCGTGGGCA GCTTCGAGATCTCGTCTGTTGCCAATTCGGTGAGACAGGACAGGAGCACG TCCCTTCCAGGATGTGCTGTCAGTAAGTAGCAGTCGTACATCCATGACCA ACGTGTACAGCAGTAGTGTTTGGACGGTTGTACAATATGCATGCCTCAAT CCAGCGAATGAAGCGTAGCGCCCCTTCTGTGACGCTCGTCTCACACAGGA GAGCCCCTATGGCAGTGGACGCCTGCAACTATGCTACACACACGTGTAGA CTATACGCACATCGCACAACATCCTGCCATAGTCTACTGACTGTACAGCT TGACGCCTGCAACCGCACGAAACCTTGTCACATGCACGTGAGTTTGCTGA CGATACCATGCCTGTCATACTTACGGTACCATCCAAGGACGGCAGTAAAG AGCGTCACGGTTGTTACCGCGAGTCTCCACGGAAGCATGAAACTACATGT ACCCTCGAACCCGATCCAACTTATATTTCTAATAGGTGTATGAGCACAAC TTTCCTGGGTGCAGCGTGACGAGACGATCGATTGAGCATCTTTCGGCTCA AGATATTGAGGTTGATGCGGACATCTGGCTTCTAAGGTTGGATCGTTGTT CTCTCTCTCATAGTTGATAAGTTCAGAGACCTGTATTGTACGGGGCTCAT TGGTGAGCTCAAGGGGCGGTTTGCATAGTTGCTGAGAACCCGACTGCTTC GTCTTATCATTTACATACAGTAGATTTCCCTACAGCCCCAACGTACTCGG ATAACCGTTGGGAATCTCCGAAGACTGTCCCACACAAAACATCGCAGAAC GTGTGCCTGAGCGTCAACTTTCACTTTCTGTCTATCCATTTCGCTACGTC TACGTTTGGGCAGCCCGCCGTGCCAGCCTTTCTGCAGGGTTGGAAATAAG ATGGACGAACAGGACAACCGCTCGGTCAGCTTCCTGCATCTCCTGTCTCT GCTCAAAACCATCAGAACACCGCCGTCGTTCCTGTTCCTAGAGAACGTGC AAGGGTTCGAAGGTTCACACGCCCATCTTCGCCTACTCGAGGTAAGGGCC TGCATGTTCGAGGTCACATAATTGCCCATGTACGTTGCTGGTTGTGGTTC AGTGGAAGAGCACACCCCCCGTATTTTGACCATGTATGCGTGTATGTCGC CCTGGTACTGGTCTCCTTGCATGAAGTTTGCGCAAGGTTTCATGTTTGCC ATGTACCTGGCTGGTTGTTGTTTGGCGGAAGAGTACACAGGCCGTATTTG GCCATGTATGTATGTATGTCGCCCCGGTGCTGGTCTCCTTACATTGTTTG CGCATTGCCTCAAGTGCGGTGATCCGGTCGTTTGAAGATGCTGTACTCTT TAACTTAGTGCGATACTCATCTCCTATTCCGCTGCCCGTGTCTCTGCTCA CCCTAGACTTTGACCGCTCGGGGATTCGACGTAGAGCAGTACTTACTTTC GCCTAATCAGCTGGGCATTCCAAATAGCCGTCTGCGGTACTACTGCCTTG CGCGGAGGAGAAATGCCGACGGTAAGGGCGAGGCCACCGACGTCAAAAAG TCGCTTCCCCAGGACGTGGCAGCCGTGCCCTCGCGTCCGCTCTCTGAATA CTTGGTGAGAGGTGTTGTGCAATGGGGTGTCTTATCGCGAAGGCTTGTGG AGCCAAGATTACTGACTGACGAACCAAAGCCTACTGAGTAGGTACGAGTG GTTTTGGTGGTACCGTCTCTTTACGGGACACAATCTAACATGATAATTCA TGTGCTCTTGACCGAGTCAACAAATGTTAACGACAACACAGCCTACATTG GTAGGGATACAATTAACAGACCATCGTGCTTGCCGCGAGCGGCGAAGTGT TTCGCCAGCAAACAGGCTCTTACCGTGGGCTATCGCGTCCACGCTCGCGT CCCCTCTAAGGACTGGCGTATCCTCAAGTGATTCCTGTGCGGACTTGATC ATGTCTGTGCACACCTCAACCGATCATTGCTGTGCACACCTCAACCGAAC GTTGTCACGCAGGATCCATCCTTATACGGGGAGGCGGCGGTTCCACTCCT ATTATCGCCGAAAGCCTGTTCACACGCAAACCCGTCCCTTCGTTTCGACG TGGTCACCCTACAATCAACCGAGACGACGACTTTCACCAAAGGCTACCGC AAACACGCGGGACGCGCGGGGCCGGTCGTGCTGCTGACGGATGACGGTGG ACGGCGGGTTAGCGGGGAGAAGCTAGGTCGGTTTCCATCCGGTTTGGACC TGGGGCCCGAGGGGAAAGAGGTTCGGTGGTTTTCGGATAGGGAGATGCTC CGGTTGCACGGGTTCCCGGAAGCTTTTGATTTCCCGACGGCCGTCACCCC ACGTCAGCGTTGTGCGTTGGTAGGCAACAGCGTCAATGTAGAGGTGGTGG CACTGTTGCTCGAGTTCATGCTATTCGAAGAAAACGCGCGAGGAGACTGG GGGGAACGGTTCAGGGCCGAGCAGCGGCGGGTGTCGACGGTGTAAATCGT GCCCATGACATGCGCCGTAGTCATTGGGGGCGACTACCCCTCAACTCATG TTTCGTGTGTGCGTCTTGGGCACGGGGCGTAGTCAGGCAGCAAGGATGGG GATGTTCCGGGAGGAGAAATAGTGTACCAAAGTGCTGTGCGAACACGGTG ACGCGGAGCGGTAGAGCATAGGAACAGATGTACCGGAGGAACACAAACAA GCGAGGGCGCGATAATGCACTACATCTTCGTACAAAAAAATCTGTTTCAA TTCGCATTTGATACGTTCAGGAC
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1018:311..3333-

>mRNA_Ecto-sp9_F_contig1018.211.1 ID=mRNA_Ecto-sp9_F_contig1018.211.1|Name=mRNA_Ecto-sp9_F_contig1018.211.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2478bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1018:311..3333- (Ectocarpus species9 EcSCA_722f female)
ATGCACTCGTTCCATGCTGCGGCGGTTTGCCTTTCGATTGTCCAAGCATC
CGGGTTTGCATCTACTGCTCACTACCATCGGCCGCATTCACAGCGACCAG
GAAGTCATGCGCTGGGAGCGACCGGCGTCCTCGAGGAACCCCCACGAGCG
GATCCCTTGGTGGCCTTAGAGTTTTATAGTGGGATAGGTGGGCTGCGCGT
ATCCCTGGAGAAAGCATTAGAGGCGGTCAGCCTTGAAACAAGCGTGGGCA
GCTTCGAGATCTCGTCTGTTGCCAATTCGATGCACTCGTTCCATGCTGCG
GCGGTTTGCCTTTCGATTGTCCAAGCATCCGGGTTTGCATCTACTGCTCA
CTACCATCGGCCGCATTCACAGCGACCAGGAAGTCATGCGCTGGGAGCGA
CCGGCGTCCTCGAGGAACCCCCACGAGCGGATCCCTTGGTGGCCTTAGAG
TTTTATAGTGGGATAGGTGGGCTGCGCGTATCCCTGGAGAAAGCATTAGA
GGCGGTCAGCCTTGAAACAAGCGTGGGCAGCTTCGAGATCTCGTCTGTTG
CCAATTCGGTGTATGAGCACAACTTTCCTGGGTGCAGCGTGACGAGACGA
TCGATTGAGCATCTTTCGGCTCAAGATATTGAGGTTGATGCGGACATCTG
GCTTCTAAGGTGTATGAGCACAACTTTCCTGGGTGCAGCGTGACGAGACG
ATCGATTGAGCATCTTTCGGCTCAAGATATTGAGGTTGATGCGGACATCT
GGCTTCTAAGCCCGCCGTGCCAGCCTTTCTGCAGGGTTGGAAATAAGATG
GACGAACAGGACAACCGCTCGGTCAGCTTCCTGCATCTCCTGTCTCTGCT
CAAAACCATCAGAACACCGCCGTCGTTCCTGTTCCTAGAGAACGTGCAAG
GGTTCGAAGGTTCACACGCCCATCTTCGCCTACTCGAGCCCGCCGTGCCA
GCCTTTCTGCAGGGTTGGAAATAAGATGGACGAACAGGACAACCGCTCGG
TCAGCTTCCTGCATCTCCTGTCTCTGCTCAAAACCATCAGAACACCGCCG
TCGTTCCTGTTCCTAGAGAACGTGCAAGGGTTCGAAGGTTCACACGCCCA
TCTTCGCCTACTCGAGACTTTGACCGCTCGGGGATTCGACGTAGAGCAGT
ACTTACTTTCGCCTAATCAGCTGGGCATTCCAAATAGCCGTCTGCGGTAC
TACTGCCTTGCGCGGAGGAGAAATGCCGACGGTAAGGGCGAGGCCACCGA
CGTCAAAAAGTCGCTTCCCCAGGACGTGGCAGCCGTGCCCTCGCGTCCGC
TCTCTGAATACTTGACTTTGACCGCTCGGGGATTCGACGTAGAGCAGTAC
TTACTTTCGCCTAATCAGCTGGGCATTCCAAATAGCCGTCTGCGGTACTA
CTGCCTTGCGCGGAGGAGAAATGCCGACGGTAAGGGCGAGGCCACCGACG
TCAAAAAGTCGCTTCCCCAGGACGTGGCAGCCGTGCCCTCGCGTCCGCTC
TCTGAATACTTGGATCCATCCTTATACGGGGAGGCGGCGGTTCCACTCCT
ATTATCGCCGAAAGCCTGTTCACACGCAAACCCGTCCCTTCGTTTCGACG
TGGTCACCCTACAATCAACCGAGACGACGACTTTCACCAAAGGCTACCGC
AAACACGCGGGACGCGCGGGGCCGGTCGTGCTGCTGACGGATGACGGTGG
ACGGCGGGTTAGCGGGGAGAAGCTAGGTCGGTTTCCATCCGGTTTGGACC
TGGGGCCCGAGGGGAAAGAGGTTCGGTGGTTTTCGGATAGGGAGATGCTC
CGGTTGCACGGGTTCCCGGAAGCTTTTGATTTCCCGACGGCCGTCACCCC
ACGTCAGCGTTGTGCGTTGGTAGGCAACAGCGTCAATGTAGAGGTGGTGG
CACTGTTGCTCGAGTTCATGCTATTCGAAGAAAACGCGCGAGGAGACTGG
GGGGAACGGTTCAGGGCCGAGCAGCGGCGGGTGTCGACGGTGTAAGATCC
ATCCTTATACGGGGAGGCGGCGGTTCCACTCCTATTATCGCCGAAAGCCT
GTTCACACGCAAACCCGTCCCTTCGTTTCGACGTGGTCACCCTACAATCA
ACCGAGACGACGACTTTCACCAAAGGCTACCGCAAACACGCGGGACGCGC
GGGGCCGGTCGTGCTGCTGACGGATGACGGTGGACGGCGGGTTAGCGGGG
AGAAGCTAGGTCGGTTTCCATCCGGTTTGGACCTGGGGCCCGAGGGGAAA
GAGGTTCGGTGGTTTTCGGATAGGGAGATGCTCCGGTTGCACGGGTTCCC
GGAAGCTTTTGATTTCCCGACGGCCGTCACCCCACGTCAGCGTTGTGCGT
TGGTAGGCAACAGCGTCAATGTAGAGGTGGTGGCACTGTTGCTCGAGTTC
ATGCTATTCGAAGAAAACGCGCGAGGAGACTGGGGGGAACGGTTCAGGGC
CGAGCAGCGGCGGGTGTCGACGGTGTAA
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