mRNA_Ecto-sp9_F_contig10164.199.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig10164.199.1 vs.
Match: Aldehyde (dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L493_9PHAE) HSP 1 Score: 482 bits (1240), Expect = 8.690e-168 Identity = 241/257 (93.77%), Postives = 249/257 (96.89%), Query Frame = 1
Query: 1 RSLEWRRKQLNALRRMCEENEDAMADALKKDLRRCYNTAVTYELWDIIAQIGYMEDNLQKMAKNEKMPAPLALKPLSFEVWKEPFGVVTIIAPWNFPFALLLNPVAGALAAGNPCVLKPSEVSSASGQLIAELVPKYLEPTVARVVTGSVAQTTELLAQKVDSIMYTGGGKVARIVMAAAAKNLTPVTLELGGKCPTYVDESADLQVAARRIANYKNVNAGQVCIAPDHVLIHHKVRDAFLAHLKVEHARIFPGKEQ 771
RSLEWRRKQLNA+RRMC+ENEDAM DALKKDLRRCYNTAVTYELWDIIAQIGYMEDNL+KM KNEK+P+PLALKPLS+EVWKEP GVVTIIAPWNFPF+LLLNPV GALAAGN CVLKPSEVSSASGQLIAELVPKYLEPTVARVVTG VAQTTELLAQKVDSIMYTGGGKVARIVMAAAAKNLTPVTLELGGKCPTYVDESADLQVAARRIA YKNVNAGQVCIAPDHVLIHHKVRDAFL HLKVEHARIFPG+EQ
Sbjct: 26 RSLEWRRKQLNAIRRMCQENEDAMVDALKKDLRRCYNTAVTYELWDIIAQIGYMEDNLEKMTKNEKLPSPLALKPLSYEVWKEPLGVVTIIAPWNFPFSLLLNPVVGALAAGNTCVLKPSEVSSASGQLIAELVPKYLEPTVARVVTGGVAQTTELLAQKVDSIMYTGGGKVARIVMAAAAKNLTPVTLELGGKCPTYVDESADLQVAARRIAYYKNVNAGQVCIAPDHVLIHHKVRDAFLEHLKVEHARIFPGEEQ 282
BLAST of mRNA_Ecto-sp9_F_contig10164.199.1 vs.
Match: Aldehyde (dehydrogenase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A4P5RIC1_9ACTN) HSP 1 Score: 244 bits (622), Expect = 6.060e-75 Identity = 132/238 (55.46%), Postives = 162/238 (68.07%), Query Frame = 1
Query: 1 RSLEWRRKQLNALRRMCEENEDAMADALKKDLRRCYNTAVTYELWDIIAQIGYMEDNLQKMAKNEKMPAPLALKPLSFEVWKEPFGVVTIIAPWNFPFALLLNPVAGALAAGNPCVLKPSEVSSASGQLIAELVPKYLEPTVARVVTGSVAQTTELLAQKVDSIMYTGGGKVARIVMAAAAKNLTPVTLELGGKCPTYVDESADLQVAARRIANYKNVNAGQVCIAPDHVLIHHKVRD 714
R L WR+ QL A+ RM EE++D + ALK DL R A Y+L IA++ M NL+K K+P P+ KP S EP G V +IAPWN+P LLL P AGA+AAGN V+KPSEVSSA+ ++A+ VP+YL+ +V G V +TTELLAQK + I YTG G V RIVM AAA+NLTPVTLELGGK PT VD SA++ VAARRIA K VNAGQ C+APD+VL+H V D
Sbjct: 23 RPLSWRKAQLEAMIRMIEEHQDEFSVALKADLGRGVEEAWMYDLGFTIAEVKLMLKNLKKWTSARKVPTPIVSKPGSSRRIPEPLGTVLVIAPWNYPVQLLLVPAAGAIAAGNAVVMKPSEVSSATSAVLAKFVPQYLDKQAIAIVEGGVQETTELLAQKFEHIFYTGNGTVGRIVMRAAAENLTPVTLELGGKSPTIVDASANIDVAARRIAWAKYVNAGQTCVAPDYVLVHKSVSD 260
BLAST of mRNA_Ecto-sp9_F_contig10164.199.1 vs.
Match: Unannotated (protein n=4 Tax=root TaxID=1 RepID=A0A6J6HZC1_9ZZZZ) HSP 1 Score: 239 bits (610), Expect = 4.660e-73 Identity = 129/245 (52.65%), Postives = 169/245 (68.98%), Query Frame = 1
Query: 1 RSLEWRRKQLNALRRMCEENEDAMADALKKDLRRCYNTAVTYELWDIIAQIGYMEDNLQKMAKNEKMPAPLALKPLSFEVWKEPFGVVTIIAPWNFPFALLLNPVAGALAAGNPCVLKPSEVSSASGQLIAELVPKYLEPTVARVVTGSVAQTTELLAQKVDSIMYTGGGKVARIVMAAAAKNLTPVTLELGGKCPTYVDESADLQVAARRIANYKNVNAGQVCIAPDHVLIHHKVRDAFLAHLK 735
R LEWRR QL + M EE+E A +DAL+ DL + ++ +I ++ M NL+K K E++ +P+ +P EP GVV +IAPWN+P LLL P AGALAAGN ++KPSEVS+A+ L+A LVP+Y + + +V G VA+TTELLAQK D I YTG G V R+VMAAA K+LTPVTLELGGK P VDESA+++V+ARRIA K +NAGQ CIAPD+V++H KVR F+ L+
Sbjct: 31 RPLEWRRHQLQQMVNMLEEHEAAFSDALRIDLGKPTVEGFITDIAFVIGEVKTMIKNLKKWNKPERVSSPIVTQPAKSRRIPEPLGVVLVIAPWNYPVQLLLVPAAGALAAGNAVMMKPSEVSAATSALLARLVPQYFDSSAVGIVEGGVAETTELLAQKWDHIFYTGNGTVGRVVMAAAVKHLTPVTLELGGKSPVIVDESANVRVSARRIAWGKWLNAGQTCIAPDYVMVHEKVRAQFVEELQ 275
BLAST of mRNA_Ecto-sp9_F_contig10164.199.1 vs.
Match: Aldehyde (dehydrogenase family protein (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A6L6DYH0_9ACTN) HSP 1 Score: 235 bits (600), Expect = 4.890e-73 Identity = 125/245 (51.02%), Postives = 163/245 (66.53%), Query Frame = 1
Query: 1 RSLEWRRKQLNALRRMCEENEDAMADALKKDLRRCYNTAVTYELWDIIAQIGYMEDNLQKMAKNEKMPAPLALKPLSFEVWKEPFGVVTIIAPWNFPFALLLNPVAGALAAGNPCVLKPSEVSSASGQLIAELVPKYLEPTVARVVTGSVAQTTELLAQKVDSIMYTGGGKVARIVMAAAAKNLTPVTLELGGKCPTYVDESADLQVAARRIANYKNVNAGQVCIAPDHVLIHHKVRDAFLAHLK 735
R L WRR+QL + +M +ENE+A DALK DL + ++ + +I M NL K + EK+P PL P + EP GVV +IAPWN+P LLL P AGA+AAGN ++KPSEVS ++A LVPKYL+ ++ G V +TTELLAQK D I YTG GK+ R+VMAAAA NLTPVTLELGGK P +D+SA+++VAARR+A K +NAGQ C+APD+VL+ V D F+ L+
Sbjct: 31 RPLAWRRQQLQNMIKMLDENEEAFLDALKTDLGKPMVEGFITDIAFVTGEIKLMLKNLNKWNEVEKVPTPLVAMPAKSVLIPEPLGVVCVIAPWNYPVQLLLVPAAGAIAAGNTVIMKPSEVSPTVSAVLARLVPKYLDTKAIALIEGGVPETTELLAQKFDHIFYTGNGKIGRVVMAAAAVNLTPVTLELGGKSPVIIDKSANIEVAARRVAWGKWLNAGQTCVAPDYVLVDASVEDKFVNALR 275
BLAST of mRNA_Ecto-sp9_F_contig10164.199.1 vs.
Match: Aldehyde (dehydrogenase family protein (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7K0LBF2_9ACTN) HSP 1 Score: 230 bits (586), Expect = 4.830e-72 Identity = 122/236 (51.69%), Postives = 158/236 (66.95%), Query Frame = 1
Query: 1 RSLEWRRKQLNALRRMCEENEDAMADALKKDLRRCYNTAVTYELWDIIAQIGYMEDNLQKMAKNEKMPAPLALKPLSFEVWKEPFGVVTIIAPWNFPFALLLNPVAGALAAGNPCVLKPSEVSSASGQLIAELVPKYLEPTVARVVTGSVAQTTELLAQKVDSIMYTGGGKVARIVMAAAAKNLTPVTLELGGKCPTYVDESADLQVAARRIANYKNVNAGQVCIAPDHVLIHHKV 708
R L WR+ QL + M E+++D ++ ALK DL R A Y++ I ++ M NL+K K+P P+ KP S +P GVV +IAPWN+P LLL P AGA+AAGN V+KPSEVSS + +++A++VP+Y +V G V +TTELL QK D I YTG G V R+VM AAA+NLTPVTLELGGK PT VD SA++ VAARRIA K VNAGQ C+APD+VL+H +
Sbjct: 19 RPLAWRKAQLETMITMLEKHQDELSAALKVDLGRGVEEAWLYDIGFTITEVKLMLKNLKKWTAPRKVPTPMVTKPGSSMRVPQPLGVVCVIAPWNYPVQLLLIPAAGAIAAGNAVVMKPSEVSSETSRVLAKIVPQYFTDKAVAIVEGGVQETTELLKQKFDHIFYTGNGAVGRVVMRAAAENLTPVTLELGGKSPTIVDASANIAVAARRIAWAKYVNAGQTCVAPDYVLVHKSI 254
BLAST of mRNA_Ecto-sp9_F_contig10164.199.1 vs.
Match: Aldehyde (dehydrogenase n=1 Tax=Acidimicrobiia bacterium BACL6 MAG-120910-bin40 TaxID=1655586 RepID=A0A0R2QPK7_9ACTN) HSP 1 Score: 236 bits (602), Expect = 5.370e-72 Identity = 128/245 (52.24%), Postives = 164/245 (66.94%), Query Frame = 1
Query: 1 RSLEWRRKQLNALRRMCEENEDAMADALKKDLRRCYNTAVTYELWDIIAQIGYMEDNLQKMAKNEKMPAPLALKPLSFEVWKEPFGVVTIIAPWNFPFALLLNPVAGALAAGNPCVLKPSEVSSASGQLIAELVPKYLEPTVARVVTGSVAQTTELLAQKVDSIMYTGGGKVARIVMAAAAKNLTPVTLELGGKCPTYVDESADLQVAARRIANYKNVNAGQVCIAPDHVLIHHKVRDAFLAHLK 735
R L WR+ QL A RM +EN D A+AL DL R A Y++ I +I M NL+K + K+ P+ P S +P GVV +IAPWN+P LLL PVAGA+AAGN V+KPSEVSSA+ L+ +LVP+YL+ +V G+V++TT+LLA+K D I YTG G V RIVM AAA+NLTPVTLELGGK PT VD+SA+L +A RRIA K VNAGQ C+APD+VL H + D + ++
Sbjct: 19 RPLAWRKTQLQACVRMLQENADQFAEALATDLGRGPEEAWLYDIGFSITEIELMIKNLKKWTEPRKVSTPMVSLPGSSHRVPQPLGVVLVIAPWNYPIQLLLIPVAGAIAAGNAVVMKPSEVSSATSALLGKLVPRYLDNDAITIVEGAVSETTQLLAEKFDHIFYTGNGTVGRIVMRAAAENLTPVTLELGGKSPTIVDKSANLAIAGRRIAWAKYVNAGQTCVAPDYVLAHDSIADKLVEEIR 263
BLAST of mRNA_Ecto-sp9_F_contig10164.199.1 vs.
Match: Aldehyde (dehydrogenase n=2 Tax=Herbiconiux TaxID=881616 RepID=A0A852SRM2_9MICO) HSP 1 Score: 236 bits (601), Expect = 1.060e-71 Identity = 128/254 (50.39%), Postives = 166/254 (65.35%), Query Frame = 1
Query: 1 RSLEWRRKQLNALRRMCEENEDAMADALKKDLRRCYNTAVTYELWDIIAQIGYMEDNLQKMAKNEKMPAPLALKPLSFEVWKEPFGVVTIIAPWNFPFALLLNPVAGALAAGNPCVLKPSEVSSASGQLIAELVPKYLEPTVARVVTGSVAQTTELLAQKVDSIMYTGGGKVARIVMAAAAKNLTPVTLELGGKCPTYVDESADLQVAARRIANYKNVNAGQVCIAPDHVLIHHKVRDAFLAHLKVEHARIFPG 762
RSL WR QL A++RM +EN A DAL DL + A EL ++A+I + +L+ + ++P PLAL P S EP GVV +I+PWN+P LLL P GALAAGN +LKPSE++ A+ L+AELVP+YL+ VV G V TT+LLA++ D I YTG V RIVM AAAK+LTPVTLELGGK P YVD++ DL AARRIA K +NAGQ C+APD+++ +V DA + HL A ++ G
Sbjct: 27 RSLRWRTAQLTAMKRMLDENSAAFEDALFTDLGKNPTEAALTELNVVVAEIQHTLKHLRGWLRPRRVPVPLALAPASASTMLEPLGVVLVISPWNYPLQLLLEPAVGALAAGNAVLLKPSELAPATSALLAELVPRYLDERAVAVVEGGVEVTTQLLAERFDHIFYTGNAAVGRIVMTAAAKHLTPVTLELGGKSPVYVDDTVDLAGAARRIAWGKFLNAGQTCVAPDYLMATREVADALVPHLVEVIAELYEG 280
BLAST of mRNA_Ecto-sp9_F_contig10164.199.1 vs.
Match: Unannotated (protein n=2 Tax=root TaxID=1 RepID=A0A6J7RL47_9ZZZZ) HSP 1 Score: 235 bits (599), Expect = 1.630e-71 Identity = 126/246 (51.22%), Postives = 166/246 (67.48%), Query Frame = 1
Query: 1 RSLEWRRKQLNALRRMCEENEDAMADALKKDLRRCYNTAVTYELWDIIAQIGYMEDNLQKMAKNEKMPAPLALKPLSFEVWKEPFGVVTIIAPWNFPFALLLNPVAGALAAGNPCVLKPSEVSSASGQLIAELVPKYLEPTVARVVTGSVAQTTELLAQKVDSIMYTGGGKVARIVMAAAAKNLTPVTLELGGKCPTYVDESADLQVAARRIANYKNVNAGQVCIAPDHVLIHHKVRDAFLAHLKV 738
R L WR++QL AL RM E+NE A + ALK DL + ++ + +++ M NL K K +++P P+ P ++ EP GVV +IAPWN+P LLL P AGA+AAGN V+KPSEVS+ + L+A+LVPKYL+ + +V GSV +TT LL Q + I YTG G V RIVMAAAAKNLTPVTLELGGK P VD SA+++VAARR+A K +NAGQ C+APD+VL+ V F+ LK+
Sbjct: 22 RPLAWRKQQLEALVRMMEDNEAAFSAALKADLGKPDVEGFITDIAFVTSEVKAMIKNLTKWNKPQRVPTPIVAMPAKSQLIPEPLGVVLVIAPWNYPVQLLLVPAAGAIAAGNTVVMKPSEVSAETSALLAQLVPKYLDTSAVALVEGSVPETTALLDQHFNHIFYTGNGTVGRIVMAAAAKNLTPVTLELGGKSPVIVDSSANIKVAARRVAWGKFINAGQTCVAPDYVLVDKAVEQPFIEQLKI 267
BLAST of mRNA_Ecto-sp9_F_contig10164.199.1 vs.
Match: Aldehyde (dehydrogenase n=12 Tax=root TaxID=1 RepID=A0A4V0WZR2_9ACTN) HSP 1 Score: 234 bits (598), Expect = 2.070e-71 Identity = 127/244 (52.05%), Postives = 161/244 (65.98%), Query Frame = 1
Query: 1 RSLEWRRKQLNALRRMCEENEDAMADALKKDLRRCYNTAVTYELWDIIAQIGYMEDNLQKMAKNEKMPAPLALKPLSFEVWKEPFGVVTIIAPWNFPFALLLNPVAGALAAGNPCVLKPSEVSSASGQLIAELVPKYLEPTVARVVTGSVAQTTELLAQKVDSIMYTGGGKVARIVMAAAAKNLTPVTLELGGKCPTYVDESADLQVAARRIANYKNVNAGQVCIAPDHVLIHHKVRDAFLAHL 732
R L WR++QL + +M EENED ALK DL + ++ + +I M NL+K K +++P PL P + EP GVV +IAPWN+P LLL P AGA+AAGN V+KPSEVS+A+ ++A LVPKYL+ +V G V +TT LLAQ D I YTG G V RIVMAAAA NLTPVTLELGGK P +DESA++ V ARRIA K +NAGQ C+APD++L++ KVR FL L
Sbjct: 18 RPLAWRKQQLEQMIKMIEENEDDFLAALKTDLGKPNVEGFITDIAFVTGEIKLMLKNLKKWNKPQRVPTPLVTMPAKSHLIPEPLGVVLVIAPWNYPVQLLLVPAAGAIAAGNAVVMKPSEVSAATSAVLARLVPKYLDQKAITLVEGGVPETTALLAQHFDHIFYTGNGTVGRIVMAAAANNLTPVTLELGGKSPVIIDESANIHVTARRIAWGKWLNAGQTCVAPDYILVNEKVRQPFLDEL 261
BLAST of mRNA_Ecto-sp9_F_contig10164.199.1 vs.
Match: Aldehyde (dehydrogenase n=4 Tax=Streptomyces TaxID=1883 RepID=A0A5Q4SXZ4_9ACTN) HSP 1 Score: 234 bits (598), Expect = 3.830e-71 Identity = 122/244 (50.00%), Postives = 167/244 (68.44%), Query Frame = 1
Query: 1 RSLEWRRKQLNALRRMCEENEDAMADALKKDLRRCYNTAVTYELWDIIAQIGYMEDNLQKMAKNEKMPAPLALKPLSFEVWKEPFGVVTIIAPWNFPFALLLNPVAGALAAGNPCVLKPSEVSSASGQLIAELVPKYLEPTVARVVTGSVAQTTELLAQKVDSIMYTGGGKVARIVMAAAAKNLTPVTLELGGKCPTYVDESADLQVAARRIANYKNVNAGQVCIAPDHVLIHHKVRDAFLAHL 732
R WRR+QL+ALRRM ++ A+ +AL DLR+ + E+ ++A+I + +L + + ++ P+ +KP + + EP GV IIAPWN+P L LNP+ GALAAGN V+KPSE++ A+ L+A+L+P++LE VV G+V +TTELLAQ+ D I YTG G V RIV AAAAKNLTPVTLELGGK P ++DE+AD+ V ARR+A K NAGQ C+APD+ L+ H RD+ LA L
Sbjct: 32 RPAAWRRRQLHALRRMLRDHTSAIEEALYDDLRKGRTESHLTEIGGVLAEIEHTLRHLDRWMRPRRVSVPMNIKPATARIHSEPLGVCLIIAPWNYPLTLTLNPLVGALAAGNAAVVKPSELAPATSALLADLLPRHLEAVA--VVEGAVEETTELLAQRFDHIFYTGNGAVGRIVAAAAAKNLTPVTLELGGKSPVFIDETADMAVTARRLAWGKFTNAGQTCVAPDYALVTHAARDSLLAEL 273 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10164.199.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig10164.199.1 >prot_Ecto-sp9_F_contig10164.199.1 ID=prot_Ecto-sp9_F_contig10164.199.1|Name=mRNA_Ecto-sp9_F_contig10164.199.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=257bp RSLEWRRKQLNALRRMCEENEDAMADALKKDLRRCYNTAVTYELWDIIAQback to top mRNA from alignment at Ecto-sp9_F_contig10164:105..4685+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig10164.199.1 ID=mRNA_Ecto-sp9_F_contig10164.199.1|Name=mRNA_Ecto-sp9_F_contig10164.199.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=4581bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10164:105..4685+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig10164:105..4685+ >mRNA_Ecto-sp9_F_contig10164.199.1 ID=mRNA_Ecto-sp9_F_contig10164.199.1|Name=mRNA_Ecto-sp9_F_contig10164.199.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1542bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10164:105..4685+ (Ectocarpus species9 EcSCA_722f female)back to top |