mRNA_Ecto-sp9_F_contig10139.176.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig10139.176.1
Unique NamemRNA_Ecto-sp9_F_contig10139.176.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig10139.176.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF90_9PHAE)

HSP 1 Score: 839 bits (2168), Expect = 7.960e-304
Identity = 446/463 (96.33%), Postives = 453/463 (97.84%), Query Frame = 3
Query:  153 MQVDRTIEIRGEERVVRQQRKKHSRGILLISQLLRKGTTEAAGKPVQSVVAGEVELLEKGREHVEGIRERASKRGKRQPAAXXXXXXXXXXKKAKRKGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAAQVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLGIRHETFSDARRRMHNTNHDIAPKIAASEGCYVYNERKTRSDVTNPEVMALARAFWHSDDVSRATGNSGARDMYKESKKRDAPSHPRRQLMHKGDSVWRMFLESRRYLALKSRLLEQDSNFTDPGRTTFLSTRCGCLVEPTASQSACQVHTQQTLYLEALSFLMGSIHQDCDCECDWCDDLGCQRWSVMCQDLSKFSDALACEKVNLLEGDSDGGVEFWGR 1541
            M+VDRTIEIRGEERVVRQQRK H RGILLISQLLRKGTTEAAGKPVQSVVA EVELLEKGREHVEGIRERASKRGKRQPA XXXXXXXXXX  AKRKGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAA+VAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLGIRHETFSDAR RMHNTNHDIAPKIAASEGCYVYNERKTRSDVTNPEVMALARAFWHSDDVSRATGNSG +DMYKESKKRDAPSHPRRQLMHKGDSVWRMFLESRRYLALKSRLLEQDSNFTDPGRTTFLSTRCGCLV+PTASQ ACQ+HTQQTLYLEALSFLMGSIHQDCDCEC+WCDDLGC+RWSVMCQDLSKFSDALACEKVNLLEGDSDGG EFWGR
Sbjct:    1 MEVDRTIEIRGEERVVRQQRKNHIRGILLISQLLRKGTTEAAGKPVQSVVADEVELLEKGREHVEGIRERASKRGKRQPAXXXXXXXXXXXX-AKRKGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAAKVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLGIRHETFSDARWRMHNTNHDIAPKIAASEGCYVYNERKTRSDVTNPEVMALARAFWHSDDVSRATGNSG-KDMYKESKKRDAPSHPRRQLMHKGDSVWRMFLESRRYLALKSRLLEQDSNFTDPGRTTFLSTRCGCLVDPTASQCACQIHTQQTLYLEALSFLMGSIHQDCDCECNWCDDLGCKRWSVMCQDLSKFSDALACEKVNLLEGDSDGGFEFWGR 461          
BLAST of mRNA_Ecto-sp9_F_contig10139.176.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7E6_9PHAE)

HSP 1 Score: 839 bits (2168), Expect = 1.960e-297
Identity = 446/463 (96.33%), Postives = 453/463 (97.84%), Query Frame = 3
Query:  153 MQVDRTIEIRGEERVVRQQRKKHSRGILLISQLLRKGTTEAAGKPVQSVVAGEVELLEKGREHVEGIRERASKRGKRQPAAXXXXXXXXXXKKAKRKGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAAQVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLGIRHETFSDARRRMHNTNHDIAPKIAASEGCYVYNERKTRSDVTNPEVMALARAFWHSDDVSRATGNSGARDMYKESKKRDAPSHPRRQLMHKGDSVWRMFLESRRYLALKSRLLEQDSNFTDPGRTTFLSTRCGCLVEPTASQSACQVHTQQTLYLEALSFLMGSIHQDCDCECDWCDDLGCQRWSVMCQDLSKFSDALACEKVNLLEGDSDGGVEFWGR 1541
            M+VDRTIEIRGEERVVRQQRK H RGILLISQLLRKGTTEAAGKPVQSVVA EVELLEKGREHVEGIRERASKRGKRQPA XXXXXXXXXX  AKRKGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAA+VAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLGIRHETFSDAR RMHNTNHDIAPKIAASEGCYVYNERKTRSDVTNPEVMALARAFWHSDDVSRATGNSG +DMYKESKKRDAPSHPRRQLMHKGDSVWRMFLESRRYLALKSRLLEQDSNFTDPGRTTFLSTRCGCLV+PTASQ ACQ+HTQQTLYLEALSFLMGSIHQDCDCEC+WCDDLGC+RWSVMCQDLSKFSDALACEKVNLLEGDSDGG EFWGR
Sbjct:    1 MEVDRTIEIRGEERVVRQQRKNHIRGILLISQLLRKGTTEAAGKPVQSVVADEVELLEKGREHVEGIRERASKRGKRQPAXXXXXXXXXXXX-AKRKGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAAKVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLGIRHETFSDARWRMHNTNHDIAPKIAASEGCYVYNERKTRSDVTNPEVMALARAFWHSDDVSRATGNSG-KDMYKESKKRDAPSHPRRQLMHKGDSVWRMFLESRRYLALKSRLLEQDSNFTDPGRTTFLSTRCGCLVDPTASQCACQIHTQQTLYLEALSFLMGSIHQDCDCECNWCDDLGCKRWSVMCQDLSKFSDALACEKVNLLEGDSDGGFEFWGR 461          
BLAST of mRNA_Ecto-sp9_F_contig10139.176.1 vs.
Match: Uncharacterized (protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZE2_9PHAE)

HSP 1 Score: 465 bits (1196), Expect = 1.550e-159
Identity = 274/314 (87.26%), Postives = 276/314 (87.90%), Query Frame = 3
Query:  153 MQVDRTIEIRGEERVVR-QQRKKHSRGILLISQLLRKGTTEAAGKPVQSVVAGEVELLEKGREHVEGIRERASKRGKRQPAAXXXXXXXXXXKKAKRKGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAAQVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLGIRHETFSDARRRMHNTNHDIAPKIAASEGCYV-------------------------YNERKTRSDVTNP 1016
            MQVDRTIEIRGEER VR QQRKKHSRG LLISQLLRKGTTEAAGKPVQ VVA EVELLEKGRE+VEGIRERASKRGKRQPAAXXXXXXXXX KKAK K ADAALSDPLALAHDGGTRSGATPETSREEA AEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAA+VAAIDAANTRALRASLQALKQHCNSS GWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLGIRHETFSDAR RMHNTNHDIAPKIA SEGCY                          YNERKTRSDVTNP
Sbjct:    1 MQVDRTIEIRGEEREVRLQQRKKHSRGTLLISQLLRKGTTEAAGKPVQCVVADEVELLEKGREYVEGIRERASKRGKRQPAAXXXXXXXXX-KKAKLKEADAALSDPLALAHDGGTRSGATPETSREEADAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAAKVAAIDAANTRALRASLQALKQHCNSSTGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLGIRHETFSDARWRMHNTNHDIAPKIAVSEGCYXXXXXXXXXXXXXXXXXXXXXXXXXXYNERKTRSDVTNP 313          
BLAST of mRNA_Ecto-sp9_F_contig10139.176.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K647_9PHAE)

HSP 1 Score: 450 bits (1158), Expect = 5.620e-154
Identity = 233/283 (82.33%), Postives = 253/283 (89.40%), Query Frame = 3
Query:  435 KRKGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAAQVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLGIRHETFSDARRRMHNTNHDIAPKIAASEGCYVYNERKTRSDVTNPEVMALARAFWHSDDVSRATGNSGARDMYKESKKRDAPSHPRRQLMHKGDSVWRMFLESRRYLALKSRLLEQDSNFTDPGRTTFLSTRCG 1283
            KRKGAD ALSDPLALAHD GTRSGATPE SREE  +EERRSSA++L+Q D VLMERVRAML A AA+QAAA+ AA++AANTRALRASLQALK+H NSSIGWT Y TALA AAGAGEHTC+D ++CHPG+RCKP E GGVS AERA SLGIR+ETFSDAR RMHNTNHDIAP+ A S+GCYVYNERKTRSDVTNPEVMALA+AFWHSDDVSRA      ++MYKESKKRDAPSHPRRQLMHKGD VWRMFLESRRYLALK RLLEQDS+FTDPGRTTFLSTRCG
Sbjct:   36 KRKGADVALSDPLALAHDVGTRSGATPEASREEQASEERRSSALELIQKDHVLMERVRAMLGASAADQAAAKEAAVNAANTRALRASLQALKRHSNSSIGWTAYTTALATAAGAGEHTCSDPNLCHPGKRCKPAEPGGVSFAERAKSLGIRYETFSDARVRMHNTNHDIAPRDAVSDGCYVYNERKTRSDVTNPEVMALAKAFWHSDDVSRA------KNMYKESKKRDAPSHPRRQLMHKGDRVWRMFLESRRYLALKGRLLEQDSSFTDPGRTTFLSTRCG 312          
BLAST of mRNA_Ecto-sp9_F_contig10139.176.1 vs.
Match: Uncharacterized (protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQS4_9PHAE)

HSP 1 Score: 432 bits (1110), Expect = 1.790e-146
Identity = 240/311 (77.17%), Postives = 264/311 (84.89%), Query Frame = 3
Query:  153 MQVDRTIEIRGEERVVRQQRKKHSRGILLISQLLRKGTTEAAGKPVQSVVAGEVELLEKGREHVEGIRERASKRGKRQPAAXXXXXXXXXXKKAKRKGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAAQVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLGIRHETFSDARRRMHNTNHDIAPKIAASEGCYVYNERKTRSDVTNPEVMALARAFWHSDDVSRATGNSG 1085
            M VDR I +RGE+RVVRQ RKKH+RGILL S LL+KGTT+AAG  + SVVA E +L EKGREH E I+ERASKRG +Q A XXXXXX     K KRKGAD ALSDPLALAHDGGTRSGATPE SREE  +EERRSSA++L+Q D VLMERVRAML A AA+QAAA+ AA++AANTRALRASLQALK+H NSSIGWT Y TALA AAGAGEHTC D ++C PG RCKP E GGVS AERA SLGIR+ETFSDAR RMHNTNHDIAP+ A S+GCYVYNERKTRSDVTNPEVMALA+AFWHSDDVSRATGNSG
Sbjct:    1 MLVDRIIHVRGEKRVVRQHRKKHNRGILLTSWLLKKGTTKAAGSKLSSVVADEDQLREKGREHAEAIQERASKRGNQQAAXXXXXXXSG---KGKRKGADVALSDPLALAHDGGTRSGATPEASREEQASEERRSSALELIQKDHVLMERVRAMLGASAADQAAAKEAAVNAANTRALRASLQALKRHSNSSIGWTAYTTALATAAGAGEHTCPDPNLCPPGNRCKPAEPGGVSFAERAKSLGIRYETFSDARVRMHNTNHDIAPRDAVSDGCYVYNERKTRSDVTNPEVMALAKAFWHSDDVSRATGNSG 308          
BLAST of mRNA_Ecto-sp9_F_contig10139.176.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH54_9PHAE)

HSP 1 Score: 421 bits (1081), Expect = 1.480e-142
Identity = 250/288 (86.81%), Postives = 258/288 (89.58%), Query Frame = 3
Query:  153 MQVDRTIEIRGEERVVRQQRKKHSRGILLISQLLRKGTTEAAGKPVQSVVAGEVELLEKGREHVEGIRERASKRGKRQPAAXXXXXXXXXXKKAKRKGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAAQVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLGIRHETFSDARRRMHNTNHDIAPKIAASEGCYVYNERKTRSDVTNP 1016
            MQVDRTIEIRGEERVVRQQRKKHSRGILLISQLLRKGTTEAAGKP+QSV A EVELLE GREHVEGIRERASKRGKRQPA XXXXXXXXXX  AKRKGADAALSDPLALAHDGGTRSGATPETSREEAVA+ERRSSAMDLMQNDPVL+ERVRAMLD GAAEQAAA+VAAIDAANTRALRASLQALKQHCNS        +A   +     H    +DVCH GQRCKPVESGGVSLAERANSLGIRHETFSDARRRM+NTNHDIAPKIAASEG Y YNERKTRSDVTNP
Sbjct:    1 MQVDRTIEIRGEERVVRQQRKKHSRGILLISQLLRKGTTEAAGKPMQSVFADEVELLETGREHVEGIRERASKRGKRQPAXXXXXXXXXXXX-AKRKGADAALSDPLALAHDGGTRSGATPETSREEAVADERRSSAMDLMQNDPVLIERVRAMLDTGAAEQAAAKVAAIDAANTRALRASLQALKQHCNSCRADHFPDSARCSSRSGRAHV---SDVCHAGQRCKPVESGGVSLAERANSLGIRHETFSDARRRMYNTNHDIAPKIAASEGYYEYNERKTRSDVTNP 284          
BLAST of mRNA_Ecto-sp9_F_contig10139.176.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBP5_9PHAE)

HSP 1 Score: 386 bits (991), Expect = 1.350e-129
Identity = 225/231 (97.40%), Postives = 227/231 (98.27%), Query Frame = 3
Query:  153 MQVDRTIEIRGEERVVRQQRKKHSRGILLISQLLRKGTTEAAGKPVQSVVAGEVELLEKGREHVEGIRERASKRGKRQPAAXXXXXXXXXXKKAKRKGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAAQVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESG 845
            MQVDRTIEIRGEERVVRQQRKKHSRGILLISQLLRKGTTEAAGKPVQSVVA EVELLEKGREHVEGIRERASKRGKRQPA XXXXXXXXXX  AKR+GADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAA+VAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESG
Sbjct:    1 MQVDRTIEIRGEERVVRQQRKKHSRGILLISQLLRKGTTEAAGKPVQSVVADEVELLEKGREHVEGIRERASKRGKRQPAXXXXXXXXXXXX-AKREGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAAKVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESG 230          
BLAST of mRNA_Ecto-sp9_F_contig10139.176.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA34_9PHAE)

HSP 1 Score: 388 bits (996), Expect = 1.390e-128
Identity = 221/244 (90.57%), Postives = 223/244 (91.39%), Query Frame = 3
Query:  312 VELLEKGREHVEGIRERASKRGKRQPAAXXXXXXXXXXKKAKRKGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAAQVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLGIRHETFSDARRRMHNTNHDIAPKIAASEGCYVYNERKTRSDVTNPEVMALARAF 1043
            VE + K  E VEGIRERASKRGKRQPA XXXXXXXXXX  AKRKGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQ AA VAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVA GAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLGIRHETFSDARRRMHN NHDIAPKIA SEGCYVYN+RKTRSDVT P      R F
Sbjct:    9 VESMLKASEXVEGIRERASKRGKRQPAXXXXXXXXXXXX-AKRKGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQVAANVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAPGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLGIRHETFSDARRRMHNMNHDIAPKIAVSEGCYVYNDRKTRSDVTIPRSWLSPRLF 251          
BLAST of mRNA_Ecto-sp9_F_contig10139.176.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2F6_9PHAE)

HSP 1 Score: 366 bits (939), Expect = 5.240e-122
Identity = 175/202 (86.63%), Postives = 187/202 (92.57%), Query Frame = 3
Query:  918 MHNTNHDIAPKIAASEGCYVYNERKTRSDVTNPEVMALARAFWHSDDVSRATGNSGARDMYKESKKRDAPSHPRRQLMHKGDSVWRMFLESRRYLALKSRLLEQDSNFTDPGRTTFLSTRCGCLVEPTASQSACQVHTQQTLYLEALSFLMGSIHQDCDCECDWCDDLGCQRWSVMCQDLSKFSDALACEKVNLLEGDSDGG 1523
            MHNTNHDIAP+ A S+GCYVYNERKTRSDVTNPEVMALA+AFWHSDDVSRATGNSG +DMYKES KRDAPSHPRRQLMHKGD VWRMFLESRRYLALK RLLEQDS+FTDPGRTTFLSTRCG LVEP  SQ AC+ HTQQ LYLE+LSFLMGSIHQ+CDC+CDWCD LGC++WSVMC+DLSKFSDA ACEKV LLEGDSDGG
Sbjct:    1 MHNTNHDIAPRDAVSDGCYVYNERKTRSDVTNPEVMALAKAFWHSDDVSRATGNSG-KDMYKESNKRDAPSHPRRQLMHKGDRVWRMFLESRRYLALKGRLLEQDSSFTDPGRTTFLSTRCGWLVEPIVSQYACETHTQQVLYLESLSFLMGSIHQNCDCKCDWCDGLGCKKWSVMCRDLSKFSDASACEKVYLLEGDSDGG 201          
BLAST of mRNA_Ecto-sp9_F_contig10139.176.1 vs.
Match: MULE (domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWW3_9PHAE)

HSP 1 Score: 385 bits (990), Expect = 1.090e-116
Identity = 254/524 (48.47%), Postives = 315/524 (60.11%), Query Frame = 3
Query:   30 SAIDSAWSNYMQRTPLS------RSSDLISF*DGRPDLGLAVARGSLMQVDRTIEIRGEERVVRQQRKKHSRGILLISQLLRKGTTEAAGKPVQSVVAGEVELLEKGREHVEGIRERASKRGKRQPAAXXXXXXXXXX------KKAKRKGADAAL--SDPLALAHDGGTRSGATPETS----REEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAAQVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTD-VCHPGQRCKPVESGGVSLAERANSLGIRHETFSDARRRMHNTNHDIAPKIAASEGCYVYNERKTRSDVTNPEVMALARAFWHSDDVSRATGNSGARDMYKESKKRDAPSHPRRQLMHKGDSVWRMFLESRRYLALKSRLLEQDSNFTDPGRTTFLSTRCGCLVEPTASQSACQVHTQQTLYLEALSFLMGSIHQDCDCECDWCDD-LGCQRWSVMCQDLSKFSDALACEKVNLLEGDSDGGVEFWGR 1541
            S IDSAWSNY QR  L       R    +S       +   VA  + M + R ++I GE RV+R + + H RG  L S LL+KGT  AA K + SVV     +    REHV+ ++ERA+KR       XXXXXXXXXX      ++  R GADA L  SDPL      G R    P T+    R+ A+   R      ++++D VL E +R +L  G   +AAA  AA+DA NTRAL AS++ALKQH +S+IG T Y T +A AAGA +HTC   D              G VSL  RA SLG+R  TF  AR RMH T+H I P+ A  +G Y++  RK RSD  +  VM LAR FWHSDD+SRA+G+SG + M++ SKK     HPRRQLM  GD VW  FL+   YL LK+ LL +D++FTDPGRT FLSTRCGCLVEP  SQ ACQ+HTQQ LYL+A   LM +IH +CDC C WCD   GC +W  MC+DL  FS+ALACEKV+ LE D  G  E WGR
Sbjct:  583 SPIDSAWSNYPQRNSLQGLPTPPRRDTALSL-----SVSWTVAAAATM-LRRDVKIAGEARVIRHRWRTHPRGYHLTSTLLKKGTETAATKAIGSVVDNLEGVARMAREHVDDLQERATKRXXXXXXXXXXXXXXXXXXXXXXAERGPRLGADARLARSDPLEAHLFSGPRRSPQPTTTPPRQRQTAIDGHRDGVKQSVLEDD-VLKEELRELLRVGELGEAAATKAAVDAENTRALVASIEALKQHSHSNIGRTAYNTVIAAAAGA-QHTCDPDDPXXXXXXXXXXXXHGAVSLTARAQSLGVRDATFRAARTRMHRTDHTIPPQEALEKGRYLWAPRKERSDKMDERVMGLARRFWHSDDISRASGDSGTKAMWRPSKKAGEEYHPRRQLMVAGDQVWHKFLKWPEYLGLKAELLREDNSFTDPGRTLFLSTRCGCLVEPKVSQCACQIHTQQGLYLKAFEMLMPAIHANCDCTCKWCDGGSGCGKWMAMCKDLHSFSEALACEKVDFLEEDRGGRFEHWGR 1098          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10139.176.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized7.960e-30496.33protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.960e-29796.33protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.550e-15987.26protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized5.620e-15482.33protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 131... [more]
Uncharacterized1.790e-14677.17protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.480e-14286.81protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.350e-12997.40protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.390e-12890.57protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized5.240e-12286.63protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
MULE1.090e-11648.47domain-containing protein n=2 Tax=Ectocarpus sp. C... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10139contigEcto-sp9_F_contig10139:2166..4395 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons4
Model size1541
Cds size1389
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10139.176.1prot_Ecto-sp9_F_contig10139.176.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig10139 2166..4243 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928207.757372-CDS-Ecto-sp9_F_contig10139:2165..24161622928207.757372-CDS-Ecto-sp9_F_contig10139:2165..2416Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10139 2166..2416 -
1692277795.31949-CDS-Ecto-sp9_F_contig10139:2165..24161692277795.31949-CDS-Ecto-sp9_F_contig10139:2165..2416Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10139 2166..2416 -
1622928207.770745-CDS-Ecto-sp9_F_contig10139:2584..27911622928207.770745-CDS-Ecto-sp9_F_contig10139:2584..2791Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10139 2585..2791 -
1692277795.3267524-CDS-Ecto-sp9_F_contig10139:2584..27911692277795.3267524-CDS-Ecto-sp9_F_contig10139:2584..2791Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10139 2585..2791 -
1622928207.7834015-CDS-Ecto-sp9_F_contig10139:2991..35381622928207.7834015-CDS-Ecto-sp9_F_contig10139:2991..3538Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10139 2992..3538 -
1692277795.3340049-CDS-Ecto-sp9_F_contig10139:2991..35381692277795.3340049-CDS-Ecto-sp9_F_contig10139:2991..3538Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10139 2992..3538 -
1622928207.7965176-CDS-Ecto-sp9_F_contig10139:3859..42431622928207.7965176-CDS-Ecto-sp9_F_contig10139:3859..4243Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10139 3860..4243 -
1692277795.3448772-CDS-Ecto-sp9_F_contig10139:3859..42431692277795.3448772-CDS-Ecto-sp9_F_contig10139:3859..4243Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10139 3860..4243 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928207.8116214-UTR-Ecto-sp9_F_contig10139:4243..43951622928207.8116214-UTR-Ecto-sp9_F_contig10139:4243..4395Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig10139 4244..4395 -
1692277795.3555906-UTR-Ecto-sp9_F_contig10139:4243..43951692277795.3555906-UTR-Ecto-sp9_F_contig10139:4243..4395Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig10139 4244..4395 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig10139.176.1

>prot_Ecto-sp9_F_contig10139.176.1 ID=prot_Ecto-sp9_F_contig10139.176.1|Name=mRNA_Ecto-sp9_F_contig10139.176.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=463bp
MQVDRTIEIRGEERVVRQQRKKHSRGILLISQLLRKGTTEAAGKPVQSVV
AGEVELLEKGREHVEGIRERASKRGKRQPAAAAAAASSAGAKKAKRKGAD
AALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMER
VRAMLDAGAAEQAAAQVAAIDAANTRALRASLQALKQHCNSSIGWTTYQT
ALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLGIRHETFS
DARRRMHNTNHDIAPKIAASEGCYVYNERKTRSDVTNPEVMALARAFWHS
DDVSRATGNSGARDMYKESKKRDAPSHPRRQLMHKGDSVWRMFLESRRYL
ALKSRLLEQDSNFTDPGRTTFLSTRCGCLVEPTASQSACQVHTQQTLYLE
ALSFLMGSIHQDCDCECDWCDDLGCQRWSVMCQDLSKFSDALACEKVNLL
EGDSDGGVEFWGR
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mRNA from alignment at Ecto-sp9_F_contig10139:2166..4395-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig10139.176.1 ID=mRNA_Ecto-sp9_F_contig10139.176.1|Name=mRNA_Ecto-sp9_F_contig10139.176.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=2230bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10139:2166..4395- (Ectocarpus species9 EcSCA_722f female)
GCCGACGCAAGCCTCGTTCTCCACGGCAATCGGCAATCGACTCCGCTTGG TCGAATTACATGCAGAGGACACCACTCTCGAGGTCATCAGACCTAATCTC GTTCTAGGACGGCCGTCCCGACTTGGGCCTGGCCGTGGCTCGTGGCAGCC TCATGCAGGTAGACCGCACAATCGAAATCCGAGGGGAAGAGAGGGTAGTG AGACAGCAGCGGAAGAAGCACAGCCGCGGGATACTGCTAATCAGCCAGCT GTTGAGAAAGGGTACCACCGAGGCAGCTGGAAAACCTGTGCAATCTGTGG TTGCTGGTGAAGTTGAGCTCCTCGAAAAGGGTAGAGAACATGTTGAAGGC ATCCGAGAGAGAGCATCGAAACGCGGGAAACGACAGCCTGCGGCTGCTGC TGCTGCTGCTTCATCTGCTGGGGCGAAGAAGGCGAAGCGCAAGGGGGCGG ACGCAGCTCTCTCCGACCCTCTAGCATTGGCTCATGATGGCGGGACTAGA AGCGGTGCTACCCCAGAGACTTCGCGGGAGGAAGCGGTGAGTTTTGAGTC ACTTCTGAGGTGCTGCTGAAAGGTGTTCTAGTGCTTGATTGACTGCTTTA CTTTGCGCGCCAGTTCGTGCCAGCTGCTCTATTCTTGAATTTGAAATTTG GTACACGCGCTGCCCGTCCTTTTTGCCCCCAAGAATTGAGGTCCATTCCA CCACGTCGATATCTTAAGCACAGAAAGCGCATTAAAAGTTGCACGGGTTT GGTGACTGCTGTAACTGCTGCAATGACGCTGCTACCGTGGTGTTTATTTG TGGCTCACTCATATGTTCCCCCGACTCCTCCGATAACTACTGATACGTTG TACGCAGGTTGCGGAGGAGCGTCGCTCTAGCGCGATGGATTTGATGCAGA ACGACCCCGTGTTGATGGAGCGAGTACGGGCCATGCTGGATGCTGGCGCG GCAGAGCAGGCAGCAGCTCAGGTGGCTGCGATCGACGCGGCCAACACTCG TGCACTCCGCGCGTCGTTGCAAGCGCTGAAGCAGCACTGCAACAGCTCGA TAGGGTGGACCACTTACCAGACAGCGCTCGCTGTAGCAGCCGGAGCGGGA GAGCACACGTGTACTGACACGGACGTGTGCCACCCCGGCCAGCGGTGCAA GCCCGTTGAGTCTGGTGGAGTGAGCCTTGCCGAGCGAGCCAACAGTCTCG GCATTCGGCACGAGACTTTCAGCGACGCACGGCGGCGGATGCACAACACG AACCACGACATCGCCCCCAAGATCGCTGCGAGTGAGGGATGCTACGTGTA CAACGAGCGCAAGACACGGAGTGACGTGACGAATCCCGAGGTCATGGCTC TCGCCAGGGCTTTCTGGCACTCCGACGACGTTTCCCGTGCAACAGGAAAC TCAGGCAAGTTGCTGCGTTGCGTTGCCGTTACCGTAGTCTCGGTTGTATG TGGCACTTGTGTTTTGTTGCAAAGGTCTACCGCTACGTTTGTTGTACTAC ACGGCTACACGGTGCTGTGAACTGCAATACACCCGTTCGTTTGTCCACAT TACAAATGTGATGAGTCTCTTAGAGAAAAAAAGCATTTTTTTCGCCCCCT GCAGGAGCCAGAGACATGTACAAGGAGTCTAAGAAGAGAGACGCACCCTC TCACCCTCGGAGACAGCTCATGCACAAGGGAGACAGTGTGTGGAGGATGT TCCTCGAGAGCCGGCGGTACTTGGCGCTCAAGTCAAGGCTACTTGAGCAG GACAGCAACTTCACCGACCCTGGCAGGACGACGTTTCTGTCAACGCGGTG TGGGTGTTTAGGTGGGTCAATCTGGTTGTACGGTTAGAGTGCCCAAAACG TGTACCTCTGGTACCTGATAAACCCGATCAATGTTGCTGACGTATGGCTT TGTTGACGAGGAATAAGAGCTGACATTTTTGTTCTCCTCTGTTTTTCGTC TGTTGCGATGTTTCACCGCCCCTTTTCAGTGGAGCCAACGGCATCGCAGA GTGCGTGTCAGGTCCACACGCAGCAGACGTTGTATCTCGAGGCCCTTTCG TTCTTGATGGGGTCGATACACCAAGACTGCGACTGTGAGTGTGACTGGTG TGACGATCTTGGTTGTCAGAGGTGGTCTGTCATGTGCCAGGACCTGAGCA AGTTTTCTGACGCTCTGGCGTGCGAGAAGGTAAACTTGCTGGAGGGGGAT TCCGACGGGGGAGTTGAGTTTTGGGGTCGG
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig10139:2166..4395-

>mRNA_Ecto-sp9_F_contig10139.176.1 ID=mRNA_Ecto-sp9_F_contig10139.176.1|Name=mRNA_Ecto-sp9_F_contig10139.176.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2778bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10139:2166..4395- (Ectocarpus species9 EcSCA_722f female)
ATGCAGGTAGACCGCACAATCGAAATCCGAGGGGAAGAGAGGGTAGTGAG
ACAGCAGCGGAAGAAGCACAGCCGCGGGATACTGCTAATCAGCCAGCTGT
TGAGAAAGGGTACCACCGAGGCAGCTGGAAAACCTGTGCAATCTGTGGTT
GCTGGTGAAGTTGAGCTCCTCGAAAAGGGTAGAGAACATGTTGAAGGCAT
CCGAGAGAGAGCATCGAAACGCGGGAAACGACAGCCTGCGGCTGCTGCTG
CTGCTGCTTCATCTGCTGGGGCGAAGAAGGCGAAGCGCAAGGGGGCGGAC
GCAGCTCTCTCCGACCCTCTAGCATTGGCTCATGATGGCGGGACTAGAAG
CGGTGCTACCCCAGAGACTTCGCGGGAGGAAGCGATGCAGGTAGACCGCA
CAATCGAAATCCGAGGGGAAGAGAGGGTAGTGAGACAGCAGCGGAAGAAG
CACAGCCGCGGGATACTGCTAATCAGCCAGCTGTTGAGAAAGGGTACCAC
CGAGGCAGCTGGAAAACCTGTGCAATCTGTGGTTGCTGGTGAAGTTGAGC
TCCTCGAAAAGGGTAGAGAACATGTTGAAGGCATCCGAGAGAGAGCATCG
AAACGCGGGAAACGACAGCCTGCGGCTGCTGCTGCTGCTGCTTCATCTGC
TGGGGCGAAGAAGGCGAAGCGCAAGGGGGCGGACGCAGCTCTCTCCGACC
CTCTAGCATTGGCTCATGATGGCGGGACTAGAAGCGGTGCTACCCCAGAG
ACTTCGCGGGAGGAAGCGGTTGCGGAGGAGCGTCGCTCTAGCGCGATGGA
TTTGATGCAGAACGACCCCGTGTTGATGGAGCGAGTACGGGCCATGCTGG
ATGCTGGCGCGGCAGAGCAGGCAGCAGCTCAGGTGGCTGCGATCGACGCG
GCCAACACTCGTGCACTCCGCGCGTCGTTGCAAGCGCTGAAGCAGCACTG
CAACAGCTCGATAGGGTGGACCACTTACCAGACAGCGCTCGCTGTAGCAG
CCGGAGCGGGAGAGCACACGTGTACTGACACGGACGTGTGCCACCCCGGC
CAGCGGTGCAAGCCCGTTGAGTCTGGTGGAGTGAGCCTTGCCGAGCGAGC
CAACAGTCTCGGCATTCGGCACGAGACTTTCAGCGACGCACGGCGGCGGA
TGCACAACACGAACCACGACATCGCCCCCAAGATCGCTGCGAGTGAGGGA
TGCTACGTGTACAACGAGCGCAAGACACGGAGTGACGTGACGAATCCCGA
GGTCATGGCTCTCGCCAGGGCTTTCTGGCACTCCGACGACGTTTCCCGTG
CAACAGGAAACTCAGGTTGCGGAGGAGCGTCGCTCTAGCGCGATGGATTT
GATGCAGAACGACCCCGTGTTGATGGAGCGAGTACGGGCCATGCTGGATG
CTGGCGCGGCAGAGCAGGCAGCAGCTCAGGTGGCTGCGATCGACGCGGCC
AACACTCGTGCACTCCGCGCGTCGTTGCAAGCGCTGAAGCAGCACTGCAA
CAGCTCGATAGGGTGGACCACTTACCAGACAGCGCTCGCTGTAGCAGCCG
GAGCGGGAGAGCACACGTGTACTGACACGGACGTGTGCCACCCCGGCCAG
CGGTGCAAGCCCGTTGAGTCTGGTGGAGTGAGCCTTGCCGAGCGAGCCAA
CAGTCTCGGCATTCGGCACGAGACTTTCAGCGACGCACGGCGGCGGATGC
ACAACACGAACCACGACATCGCCCCCAAGATCGCTGCGAGTGAGGGATGC
TACGTGTACAACGAGCGCAAGACACGGAGTGACGTGACGAATCCCGAGGT
CATGGCTCTCGCCAGGGCTTTCTGGCACTCCGACGACGTTTCCCGTGCAA
CAGGAAACTCAGGAGCCAGAGACATGTACAAGGAGTCTAAGAAGAGAGAC
GCACCCTCTCACCCTCGGAGACAGCTCATGCACAAGGGAGACAGTGTGTG
GAGGATGTTCCTCGAGAGCCGGCGGTACTTGGCGCTCAAGTCAAGGCTAC
TTGAGCAGGACAGCAACTTCACCGACCCTGGCAGGACGACGTTTCTGTCA
ACGCGGTGTGGGTGTTTAGGAGCCAGAGACATGTACAAGGAGTCTAAGAA
GAGAGACGCACCCTCTCACCCTCGGAGACAGCTCATGCACAAGGGAGACA
GTGTGTGGAGGATGTTCCTCGAGAGCCGGCGGTACTTGGCGCTCAAGTCA
AGGCTACTTGAGCAGGACAGCAACTTCACCGACCCTGGCAGGACGACGTT
TCTGTCAACGCGGTGTGGGTGTTTAGTGGAGCCAACGGCATCGCAGAGTG
CGTGTCAGGTCCACACGCAGCAGACGTTGTATCTCGAGGCCCTTTCGTTC
TTGATGGGGTCGATACACCAAGACTGCGACTGTGAGTGTGACTGGTGTGA
CGATCTTGGTTGTCAGAGGTGGTCTGTCATGTGCCAGGACCTGAGCAAGT
TTTCTGACGCTCTGGCGTGCGAGAAGGTAAACTTGCTGGAGGGGGATTCC
GACGGGGGAGTTGAGTTTTGGGGTCGGTGGAGCCAACGGCATCGCAGAGT
GCGTGTCAGGTCCACACGCAGCAGACGTTGTATCTCGAGGCCCTTTCGTT
CTTGATGGGGTCGATACACCAAGACTGCGACTGTGAGTGTGACTGGTGTG
ACGATCTTGGTTGTCAGAGGTGGTCTGTCATGTGCCAGGACCTGAGCAAG
TTTTCTGACGCTCTGGCGTGCGAGAAGGTAAACTTGCTGGAGGGGGATTC
CGACGGGGGAGTTGAGTTTTGGGGTCGG
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