mRNA_Ecto-sp9_F_contig10103.141.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig10103.141.1 vs.
Match: Cytochrome (b561 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L384_9PHAE) HSP 1 Score: 392 bits (1007), Expect = 2.260e-134 Identity = 195/202 (96.53%), Postives = 198/202 (98.02%), Query Frame = 1
Query: 58 MIGMMTTVLGLGLALFISLEAYSQGGLFAWHPFLMSVGALGLPTAGIQAVRSRHAVGGMGPKTQRVQLHSALSNLALASMLGGLYAIYTNKEKMGKNHWTSWHSWAGVLALALWVGNVALAGANTANLEKRRLVFLWKSRNHRWAGKAAFCAGLGAVVLGLHSGWGLRSLGGERGAWALTAGVLGVFVGIVASGGEAQAPKK 663
MIGMMTTVLGLGLALFISLE Y+QGGLFAWHPFLMSVGALGLPTAGIQAVRSRHAVGGMGPKTQRVQLHSALSNLALASMLGGLYAIYTNKEKMGKNHWTSWHSWAGVLALALWVGN A+AGANTA+LEKRRLVFLWKSRNHRWAGKAAFCAGLGAVVLGLHSGWGLRSLGGERGAW LTAGVLGVFVGIVASGGEAQ PKK
Sbjct: 1 MIGMMTTVLGLGLALFISLEGYNQGGLFAWHPFLMSVGALGLPTAGIQAVRSRHAVGGMGPKTQRVQLHSALSNLALASMLGGLYAIYTNKEKMGKNHWTSWHSWAGVLALALWVGNFAVAGANTADLEKRRLVFLWKSRNHRWAGKAAFCAGLGAVVLGLHSGWGLRSLGGERGAWTLTAGVLGVFVGIVASGGEAQTPKK 202
BLAST of mRNA_Ecto-sp9_F_contig10103.141.1 vs.
Match: Aste57867_9460 (protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812RVE1_9DINO) HSP 1 Score: 82.4 bits (202), Expect = 1.490e-14 Identity = 58/146 (39.73%), Postives = 78/146 (53.42%), Query Frame = 1
Query: 220 AVGGMGPKTQR--VQLHSALSNLALASMLG-GLYAIYTNKEKMGKNHWTSWHSWAGVLALALWVGNVALAGANTANLEKRRLVFL----WKSRNHRWAGKAAFCAGLGAVVLGLHSGWGLRSLGGERGAWALTAGVLGVFVGIVAS 636
A+ G P R + + ++N+AL ++ G +AI+ NK GK H+TSWHSWAG+ LALW+ N+AL +RLV L W+ HR G A LGAVV G+ S WG +LG W LTA +G+VAS
Sbjct: 60 AMRGRAPAALRKVLAVSHGVTNIALVAVSAVGFWAIFQNKNLHGKAHFTSWHSWAGLATLALWLMNLALG--------LQRLVALGSWQWRHVLHRLVGTLAGTISLGAVVTGIWSQWGQAALGAHL-QWILTA-----LIGLVAS 191
BLAST of mRNA_Ecto-sp9_F_contig10103.141.1 vs.
Match: Aste57867_9460 (protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KMY0_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 6.190e-14 Identity = 55/167 (32.93%), Postives = 81/167 (48.50%), Query Frame = 1
Query: 136 LFAWHPFLMSVGALGLPTAGIQAVRSRHAVGGMGPKTQRVQLHSALSNLALASMLGGLYAIYTNKEKMGKNHWTSWHSWAGVLALALWVGNVALAGANTANLEKRRLVFLWKSRNHRWAGKAAFCAGLGAVVLGLHSG-WGLRSLGGERGAWALTAGVLGVFVGIVA 633
LF+WHP +++ L + + A+ R G + VQ H + L + M G AIY NKEK + H+TS HSW G AL + N T ++ + WK HR++G AF AV G +SG WG +LG ++G A +A + + V +VA
Sbjct: 29 LFSWHPITLALAYLLATPSALIAMSDRRGETNHGKRIALVQWHVLMQILTVILMTIGFGAIYVNKEKNNRPHFTSIHSWIGCTALGFYYMNFFFGMFKTYG---GKVNWQWKDTAHRYSGTLAFLTSGVAVAYGFYSGGWGRANLG-QQGQLAASAAIALLHVAVVA 191
BLAST of mRNA_Ecto-sp9_F_contig10103.141.1 vs.
Match: Hypothetical (protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IWR2_9EUKA) HSP 1 Score: 75.5 bits (184), Expect = 6.000e-12 Identity = 63/168 (37.50%), Postives = 80/168 (47.62%), Query Frame = 1
Query: 136 LFAWHPFLMSVGALGLPTAGIQAVRSRHAVGGM------GPK-----------TQRVQLHSALSNLALASMLGGLYAIYTNKEKMGKNHWTSWHSWAGVLALALWVGNVALAGANTAN--LEKRRLVF----LWKSRNHRWAGKAAFCAGLGAVVLGLHSGWGLRSLG 570
LF WH L + L L TA + AVR R A M G K T+ V+ H LS AL S GL +I+ +K+++G+ H TS HSW G LW+ A + L RL + LW S +HR AG AA+ LGAV GL S WG +LG
Sbjct: 7 LFRWH-VLSLLPILPLGTAAVGAVRERTARVKMRGTNITGKKAVPAGARKKRATRYVKAHFVLSLSALYSAGFGLASIWLHKQRLGRAHLTSLHSWLGCATFLLWLSAYLNAQPHVWADVLRDGRLAYRPRWLWASASHREAGNAAYTLSLGAVASGLMSPWGQHALG 173
BLAST of mRNA_Ecto-sp9_F_contig10103.141.1 vs.
Match: Cytochrome (b561 domain-containing protein, putative n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5KL72_PERM5) HSP 1 Score: 72.8 bits (177), Expect = 3.660e-11 Identity = 52/136 (38.24%), Postives = 62/136 (45.59%), Query Frame = 1
Query: 139 FAWHPFLMSVGALGLPTAGIQAVRSRHAVGGMGPKTQRVQLHSALSNLALASMLGGLYAIYTNKEKMGKNHWTSWHSWAGVLALALWVGNVA---LAGANTANLEKRRLVFLWKSRNHRWAGKAAFCAGLGAVVLG 537
F WHPFLM VG + + T+ AV + G KT H L L L ++GGLY IYTNKE KNH SWHSW GV A L +G LA + V + HR+ GK A V G
Sbjct: 47 FYWHPFLMLVGTVPIATS---AVLIKKIGGYYNTKT-----HGFLLFLTLTFVVGGLYVIYTNKEMHQKNHLVSWHSWIGVTAAGLLIGEACGGFLALDPDCKIRTSPSVEAYIRIIHRYCGKITLILAYIACVTG 174
BLAST of mRNA_Ecto-sp9_F_contig10103.141.1 vs.
Match: Cytochrome (b561 domain-containing protein (Fragment) n=8 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6R3W6_PEROL) HSP 1 Score: 70.5 bits (171), Expect = 2.850e-10 Identity = 55/162 (33.95%), Postives = 70/162 (43.21%), Query Frame = 1
Query: 139 FAWHPFLMSVGALGLPTAGIQAVRSRHAVGGMGPKTQRVQLHSALSNLALASMLGGLYAIYTNKEKMGKNHWTSWHSWAGVLALALWVGNVA---LAGANTANLEKRRLVFLWKSRNHRWAGKAAFCAGLGAVVLGLHSGWGLRSLGGERGAWALTAGVLGV 615
F WHPFLM +G + + T+ AV + G KT H L L L +GGLY IYTNKE K+H SWHSW GV A L VG A + V + H++ GK A + +GW RS W + VLG+
Sbjct: 60 FYWHPFLMLIGTVPVATS---AVLIKKIGGYYNTKT-----HGFLLFLTLTLYVGGLYVIYTNKEMHHKSHLVSWHSWIGVTAAGLLVGEACGGFFALDPDCKIRTSPTVEAYIRTFHKYGGKVTLMLAYLACI----TGWYKRS------HWMVEGSVLGL 203
BLAST of mRNA_Ecto-sp9_F_contig10103.141.1 vs.
Match: Hypothetical (protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M9S9_9CRYP) HSP 1 Score: 70.1 bits (170), Expect = 2.970e-10 Identity = 48/168 (28.57%), Postives = 80/168 (47.62%), Query Frame = 1
Query: 85 GLGLALFISLEAYSQGGLFAWHPFLMSVGALGLPTAGIQAVRSRHAVGGMGPKTQRVQLHSALSNLALASMLGGLYAIYTNKEKMGKN------HWTSWHSWAGVLALALWVGNVALAGANTANLEKRRLVFLWKSRNHRWAGKAAFCAGLGAVVLGLHSGWGLRSLG 570
G L+LF + + LF++HP L+ G L L I+ ++ K +VQ H ++ + +AS +GGL+AI+ NKE M + H S H+ G A AL + + + T + + WK + HRW G ++ A++L ++ WG +LG
Sbjct: 20 GTALSLFFAYKVKFPSTLFSYHPTLLGFGWLALTPFAIKYLKESKKETKKEAKIDKVQKHGYINTVVIASTIGGLFAIWRNKELMAASKKQVAKHLVSLHAKVGAAAAALALLAFSTSLYKTYIRKVGTTDYTWKDKLHRWLGILSYLTSGLAILLIVNGPWGKFNLG 187
BLAST of mRNA_Ecto-sp9_F_contig10103.141.1 vs.
Match: Ascorbate (ferrireductase (transmembrane) n=1 Tax=Paragonimus westermani TaxID=34504 RepID=A0A5J4NE61_9TREM) HSP 1 Score: 68.6 bits (166), Expect = 1.210e-9 Identity = 52/165 (31.52%), Postives = 77/165 (46.67%), Query Frame = 1
Query: 118 AYSQGGLFAWHPFLMSVGALGLPTAGIQAVRSRHAVG-GMGPKTQRVQLHSALSNLALASMLGGLYAIYTNKEKMGKNHWTSWHSWAGVLALALWVGNVALAGANTANLEKRRLVFLWK------------SRNHRWAGKAAFCAGLGAVVLGLHSGWGLRSLGG 573
A+ LFA+HPF +S+ L L G++ + RH + P+TQ ++ H + +A ++ G AIY NK + GK+H+T+WH G+L L L+V LAG VF WK S H ++G ++LGL S W L G
Sbjct: 29 AFPMDNLFAYHPFFVSIAMLVLMPYGVR-IMDRHVCWLPVRPRTQMIKWHWIVQCIASMLLILGGAAIYLNKTRSGKSHFTTWHGLCGLLTL-LYVAIQLLAG----------FVFHWKLWPIRLLTHNQASLYHAYSGFGLLILSTLTILLGLQSSWVASKLRG 181
BLAST of mRNA_Ecto-sp9_F_contig10103.141.1 vs.
Match: Ascorbate (ferrireductase (transmembrane) n=4 Tax=Branchiostoma TaxID=7737 RepID=C3YV41_BRAFL) HSP 1 Score: 67.4 bits (163), Expect = 2.130e-9 Identity = 49/162 (30.25%), Postives = 72/162 (44.44%), Query Frame = 1
Query: 94 LALFISLEAYSQGGLFAWHPFLMSVGALGLPTAGIQAVRSRHAVGGMGPKTQRVQLHSALSNLALASMLGGLYAIYTNKEKMGKNHWTSWHSWAGVLALALWVGNVALAGANTA--NLEKRRLVFLWKSRNHRWAGKAAFCAGLGAVVLGLHSGWGLRSLGG 573
LA + A+ LF+WHP LM G L T I ++ + +V+ H L A+ +GGL AIY NKE+MGK+H+ SWH GV + V ++ G N L K + H G + ++ LG++S W + L G
Sbjct: 10 LAAVVIYTAWPGSSLFSWHPTLMVTGYGLLMTEAILMFSPESSLMINAMRKSKVRFHWILQAGAVVCAVGGLMAIYLNKERMGKDHFVSWHGLIGVTTVFYSVVQ-SMGGINLLYPKLLKSWMTLAQLKMYHATFGLLGYALACSSLALGINSNWFSQELEG 170
BLAST of mRNA_Ecto-sp9_F_contig10103.141.1 vs.
Match: cytochrome (b561 domain-containing protein 2 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI00065BA430) HSP 1 Score: 67.8 bits (164), Expect = 2.500e-9 Identity = 47/175 (26.86%), Postives = 81/175 (46.29%), Query Frame = 1
Query: 58 MIGMMTTVLGLGLALFISLEAYSQGGLFAWHPFLMSVGALGLPTAGIQAVRSRHAVGGMGPKTQRVQLHSALSNLALASMLGGLYAIYTNKEKMGKNHWTSWHSWAGVLALALWV-----GNVALAGANTANLEKRRLVFLWKSRNHRWAGKAAFCAGLGAVVLGLHSGWGLRSL 567
M+ + VL G+ ++ A LF+WHP LM++G + L GI ++ + +V +HS + + + G+ AIY NK++ GK+H+T+WH G++ +A G +A K +L L H +G A+ + VLGL S W + ++
Sbjct: 18 MVAHLAAVLFPGIIIY---SAVPGSSLFSWHPTLMAIGFVLLMFEGIVVFSKSSSLYPTASRPSKVTVHSYVIGVGVTCAFAGVAAIYVNKDRAGKDHFTTWHGLIGIITMAYCCAQSCGGALAKYYKYVGGFIKVKLADL--KLYHATSGLFAYTLVTASFVLGLQSNWAVNNI 187 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10103.141.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig10103.141.1 >prot_Ecto-sp9_F_contig10103.141.1 ID=prot_Ecto-sp9_F_contig10103.141.1|Name=mRNA_Ecto-sp9_F_contig10103.141.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=204bp MIGMMTTVLGLGLALFISLEAYSQGGLFAWHPFLMSVGALGLPTAGIQAVback to top mRNA from alignment at Ecto-sp9_F_contig10103:1810..4100- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig10103.141.1 ID=mRNA_Ecto-sp9_F_contig10103.141.1|Name=mRNA_Ecto-sp9_F_contig10103.141.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=2291bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10103:1810..4100- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig10103:1810..4100- >mRNA_Ecto-sp9_F_contig10103.141.1 ID=mRNA_Ecto-sp9_F_contig10103.141.1|Name=mRNA_Ecto-sp9_F_contig10103.141.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1224bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10103:1810..4100- (Ectocarpus species9 EcSCA_722f female)back to top |