mRNA_Ecto-sp9_F_contig10092.125.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig10092.125.1 vs.
Match: Serine (O-acetyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8S4_ECTSI) HSP 1 Score: 510 bits (1313), Expect = 8.920e-179 Identity = 263/275 (95.64%), Postives = 266/275 (96.73%), Query Frame = 1
Query: 91 SVPPGATESNVLEHVHSRRSSSRTAALIAGPGAGTRAWSSASVSPWRWLLRGGQGVWSSRSSEQRIVIANARKDHDDDVGEAGTSTAAGSSTSGSIDIKADTRWSGGTAVEGRGGGSGGSGERQDPRVHSLVDLVKLLEVSENPLWELVRFEGREASKQSHVSSMLHGSVLARTSLEDAVSCDVADKMATTFLSPTEVRSLMSDMYADEPLLDFVVAEDLLAHAMQDTSLPDVLTAMLFHKGFTALTTYRLMNWLWRRDRHNLARYLQSICSEVC 915
SVPPGATESNVLEHVHSRRSSSRTAALIAGPGAGTRAWSSASVS W WLLRGGQGV S+RSSEQR++IANAR DHDDDV EAGTSTAAGSSTSGSIDIKA RWSGGTAVEGRG GSGG GERQDPRVHSLVDLVKLLEVSENPLWELVRFEGREASKQSHVSSMLHGSVLARTSLEDAVSCDVADKMATTFLSPTEVRSLMSDMYADEPLLDFVVAEDLLAHAMQDTSLPDVLTAMLFHKGFTALTTYRLMNWLWRRDRHNLARYLQSICSEVC
Sbjct: 26 SVPPGATESNVLEHVHSRRSSSRTAALIAGPGAGTRAWSSASVSSWPWLLRGGQGVRSTRSSEQRLIIANARTDHDDDVAEAGTSTAAGSSTSGSIDIKAKPRWSGGTAVEGRGDGSGGGGERQDPRVHSLVDLVKLLEVSENPLWELVRFEGREASKQSHVSSMLHGSVLARTSLEDAVSCDVADKMATTFLSPTEVRSLMSDMYADEPLLDFVVAEDLLAHAMQDTSLPDVLTAMLFHKGFTALTTYRLMNWLWRRDRHNLARYLQSICSEVC 300
BLAST of mRNA_Ecto-sp9_F_contig10092.125.1 vs.
Match: Serine (O-acetyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGB2_9STRA) HSP 1 Score: 124 bits (310), Expect = 5.850e-30 Identity = 61/133 (45.86%), Postives = 94/133 (70.68%), Query Frame = 1
Query: 523 LWELVRFEGREASKQSH-VSSMLHGSVLARTSLEDAVSCDVADKMATTFLSPTEVRSLMSDMYADEPLLDFVVAEDLLAHAMQDTSL-PDVLTAMLFHKGFTALTTYRLMNWLWRRDRHNLARYLQSICSEVC 915
LW ++ EGR A Q +S+MLH +VL+ L DAV+ +A+K+AT F+ EV ++M++M+ +P ++ ++A D+LAHA++D+ D+L+ +LFHKGF AL TYRL +WLW++ R LAR+ QS+ SEVC
Sbjct: 11 LWTVICVEGRVACAQDQDISAMLHSNVLSHDRLADAVTVLLANKLATPFIGAMEVGTIMTEMFEADPEVEEIMAADILAHALRDSDDGTDLLSVLLFHKGFHALATYRLAHWLWQQGRRQLARFFQSVNSEVC 143
BLAST of mRNA_Ecto-sp9_F_contig10092.125.1 vs.
Match: Serine (O-acetyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TD91_9STRA) HSP 1 Score: 106 bits (265), Expect = 9.080e-23 Identity = 61/164 (37.20%), Postives = 98/164 (59.76%), Query Frame = 1
Query: 439 SGGSG-----ERQDPRVHSLVDLVKLLEVSENPLWELVRFEGREASKQSH-VSSMLHGSVLARTSLEDAVSCDVADKMATTFLSPTEVRSLMSDMYADEPLLDFVVAEDLLAHAMQDTSLPDVLTAMLFHKGFTALTTYRLMNWLWRRDRHNLARYLQSICSEV 912
SG SG E Q + DLV+LL SE+PLWELV+FE ++ Q + ++ VL R ++ A +A K+ + L T+++ L+ ++ +EP + + EDLL M+D+S+P +L A LF KG+ A+ TYR+ + ++ + R +LARYLQS+ SE+
Sbjct: 69 SGSSGASFSMELQSKSPSRIQDLVRLLHASEDPLWELVKFEAETSAAQDEKAAGLIQQRVLDRGGIQSAARDFLATKLQGSNLPATKMKLLIDSVFQEEPGIVQDLREDLLVATMRDSSIPSLLAAFLFSKGYHAVATYRIAHSIYSQGRESLARYLQSLNSEL 232
BLAST of mRNA_Ecto-sp9_F_contig10092.125.1 vs.
Match: Serine (acetyltransferase n=1 Tax=Pseudoxanthobacter soli DSM 19599 TaxID=1123029 RepID=A0A1M7ZNP2_9HYPH) HSP 1 Score: 94.7 bits (234), Expect = 5.570e-19 Identity = 51/136 (37.50%), Postives = 82/136 (60.29%), Query Frame = 1
Query: 508 VSENPLWELVRFEGRE-ASKQSHVSSMLHGSVLARTSLEDAVSCDVADKMATTFLSPTEVRSLMSDMYADEPLLDFVVAEDLLAHAMQDTSLPDVLTAMLFHKGFTALTTYRLMNWLWRRDRHNLARYLQSICSEV 912
+S +P+W VR E + A+ + ++S++ +VL ++ LEDAV +AD++AT +S ++R + ADEP + DL+A +D + + ++F KGF A+ T+RL NWLWR+ R + A YLQS SEV
Sbjct: 14 ISHDPVWSRVRLEAEQMAAAEPALTSLIVTTVLGQSRLEDAVVRRIADRLATPGVSSEQLRLTYLEALADEPAIGDTFRVDLMAVVDRDPACERFIEPVMFFKGFHAIETHRLANWLWRQGRRDYALYLQSRSSEV 149
BLAST of mRNA_Ecto-sp9_F_contig10092.125.1 vs.
Match: Serine (O-acetyltransferase n=1 Tax=Gammaproteobacteria bacterium AqS3 TaxID=1732023 RepID=UPI0019EEAC52) HSP 1 Score: 91.7 bits (226), Expect = 1.260e-17 Identity = 49/131 (37.40%), Postives = 76/131 (58.02%), Query Frame = 1
Query: 523 LWELVRFEGREASKQSHV-SSMLHGSVLARTSLEDAVSCDVADKMATTFLSPTEVRSLMSDMYADEPLLDFVVAEDLLAHAMQDTSLPDVLTAMLFHKGFTALTTYRLMNWLWRRDRHNLARYLQSICSEV 912
+W ++R E ++ ++ V +SM HGSVL+ S ++S +A+ + T L + L+ D Y D P L + EDL A D + T +LF+KG+ AL +R+ NWLWRR+RH++A YLQ S+V
Sbjct: 46 IWLILREETQKRAQAEPVLASMFHGSVLSHDSFSTSLSHILANLLQHTMLPAVPLCQLIEDAYGDSPDLALIACEDLQAARAGDPACRHYSTPLLFYKGYHALQGHRIANWLWRRERHSIALYLQGRISQV 176
BLAST of mRNA_Ecto-sp9_F_contig10092.125.1 vs.
Match: Serine (acetyltransferase n=4 Tax=Proteobacteria TaxID=1224 RepID=A0A1Z8NJP9_9HYPH) HSP 1 Score: 90.5 bits (223), Expect = 1.860e-17 Identity = 46/147 (31.29%), Postives = 81/147 (55.10%), Query Frame = 1
Query: 475 HSLVDLVKLLEVSENPLWELVRFEGREAS-KQSHVSSMLHGSVLARTSLEDAVSCDVADKMATTFLSPTEVRSLMSDMYADEPLLDFVVAEDLLAHAMQDTSLPDVLTAMLFHKGFTALTTYRLMNWLWRRDRHNLARYLQSICSEV 912
HS K ++S +P+W+ +R E +AS K +SS ++ ++L + SLED +S ++ + T + ++ L + Y+ + + V+ D+ A +D + L +++ KGF AL T+RL NWLW +R A YLQS+ S +
Sbjct: 3 HSNQKKAKTQKLSIDPIWDNIRNEATDASSKDPMISSFMYSTILGQKSLEDVLSLQLSKLLKTISIEDRVIKELFDEFYSTDSQIQQVIRADIAAVFDRDPACHRYLEPVIYFKGFHALQTHRLANWLWNNNRIEFAYYLQSVSSRI 149
BLAST of mRNA_Ecto-sp9_F_contig10092.125.1 vs.
Match: serine (O-acetyltransferase n=1 Tax=Gilvimarinus chinensis TaxID=396005 RepID=UPI00038109B0) HSP 1 Score: 89.4 bits (220), Expect = 3.950e-17 Identity = 47/135 (34.81%), Postives = 80/135 (59.26%), Query Frame = 1
Query: 511 SENPLWELVRFEGRE-ASKQSHVSSMLHGSVLARTSLEDAVSCDVADKMATTFLSPTEVRSLMSDMYADEPLLDFVVAEDLLAHAMQDTSLPDVLTAMLFHKGFTALTTYRLMNWLWRRDRHNLARYLQSICSEV 912
S +P+WE +R E A+K+ ++S L+ ++L T+LEDA+S +A+K+ + L VR ++ + AD+ + + D+ A +D++ + T LF KGF AL YR+ +WLW R+R +A +LQ+ S V
Sbjct: 9 SADPVWEQIRHSATEQAAKEPMLASFLYATILNHTTLEDALSFHLANKLESPALPAISVREVIDEALADDASIGAAMRADIQAINERDSACCSLTTPFLFFKGFHALQAYRIAHWLWTRERRAMALFLQNRISVV 143
BLAST of mRNA_Ecto-sp9_F_contig10092.125.1 vs.
Match: Serine (acetyltransferase n=1 Tax=Stappia albiluteola TaxID=2758565 RepID=A0A839AFF8_9HYPH) HSP 1 Score: 88.2 bits (217), Expect = 1.200e-16 Identity = 49/133 (36.84%), Postives = 76/133 (57.14%), Query Frame = 1
Query: 517 NPLWELVRFEGRE-ASKQSHVSSMLHGSVLARTSLEDAVSCDVADKMATTFLSPTEVRSLMSDMYADEPLLDFVVAEDLLAHAMQDTSLPDVLTAMLFHKGFTALTTYRLMNWLWRRDRHNLARYLQSICSEV 912
+P+WE +R E S + ++S ++ +VL LE+AV VAD++ +S + +R + +DEP + +V D+ A +D + L +L+ KGF A+ T+RL NWLWRR R + A YLQS SEV
Sbjct: 17 DPVWERLRSEATSMVSAEPALASFVYETVLNHDKLEEAVIHRVADRLGHVVVSASLIRQTYLEALSDEPAIGEIVRADMAAVFDRDPACTRFLEPVLYFKGFHAIQTHRLANWLWRRGREDFALYLQSRSSEV 149
BLAST of mRNA_Ecto-sp9_F_contig10092.125.1 vs.
Match: Serine (acetyltransferase n=1 Tax=Cohaesibacter sp. ES.047 TaxID=1798205 RepID=A0A285MAH6_9HYPH) HSP 1 Score: 88.2 bits (217), Expect = 1.200e-16 Identity = 46/133 (34.59%), Postives = 73/133 (54.89%), Query Frame = 1
Query: 517 NPLWELVRFEGREASKQSHV-SSMLHGSVLARTSLEDAVSCDVADKMATTFLSPTEVRSLMSDMYADEPLLDFVVAEDLLAHAMQDTSLPDVLTAMLFHKGFTALTTYRLMNWLWRRDRHNLARYLQSICSEV 912
+P+W VR E E + V SS ++ +VL+ LE+AV + D+M + + +R + YA +P L + D++A +D + L +L+ KGF A+ T+RL NWLW+ R + A YLQS+ S V
Sbjct: 18 DPIWHRVRSEAEEVIRAEPVLSSFIYSTVLSHKRLENAVMHRLVDRMHSPAMDSEAIRQAYREAYASDPSLSDAMRADIVAVVDRDPACDRYLDPLLYFKGFQAIQTHRLANWLWKNGRQDFALYLQSVSSAV 150
BLAST of mRNA_Ecto-sp9_F_contig10092.125.1 vs.
Match: Serine (acetyltransferase n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) TaxID=991905 RepID=F2J515_POLGS) HSP 1 Score: 87.4 bits (215), Expect = 2.180e-16 Identity = 50/133 (37.59%), Postives = 77/133 (57.89%), Query Frame = 1
Query: 517 NPLWELVRFEGRE-ASKQSHVSSMLHGSVLARTSLEDAVSCDVADKMATTFLSPTEVRSLMSDMYADEPLLDFVVAEDLLAHAMQDTSLPDVLTAMLFHKGFTALTTYRLMNWLWRRDRHNLARYLQSICSEV 912
+P+W+ +R E + + +SS ++ +VL LEDAV + D++ +S + +R S+ ADEP L + D++A +D + +L +L+ KGF AL T+RL NWLWRR R + A YLQS SEV
Sbjct: 17 DPVWQQLREEAEAMVAGEPALSSFVYETVLNHRRLEDAVIHRLGDRLGRDVVSASLIRQTYSEALADEPELGEIFRVDMVAVYDRDPACTRLLEPVLYFKGFHALQTHRLANWLWRRGRLDFALYLQSRASEV 149 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10092.125.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig10092.125.1 >prot_Ecto-sp9_F_contig10092.125.1 ID=prot_Ecto-sp9_F_contig10092.125.1|Name=mRNA_Ecto-sp9_F_contig10092.125.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=305bp MIHPGQRRRRRRRRRRRRRALSCVVALLLLSVPPGATESNVLEHVHSRRSback to top mRNA from alignment at Ecto-sp9_F_contig10092:2718..4461+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig10092.125.1 ID=mRNA_Ecto-sp9_F_contig10092.125.1|Name=mRNA_Ecto-sp9_F_contig10092.125.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=1744bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10092:2718..4461+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig10092:2718..4461+ >mRNA_Ecto-sp9_F_contig10092.125.1 ID=mRNA_Ecto-sp9_F_contig10092.125.1|Name=mRNA_Ecto-sp9_F_contig10092.125.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1830bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10092:2718..4461+ (Ectocarpus species9 EcSCA_722f female)back to top |