mRNA_Ecto-sp9_F_contig1008.117.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig1008.117.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEF4_ECTSI) HSP 1 Score: 2570 bits (6660), Expect = 0.000e+0 Identity = 1797/2073 (86.69%), Postives = 1820/2073 (87.80%), Query Frame = 1
Query: 1 MEEDRPWAPSSNNAGSGAGRASPLNDSFKDDIQAIGRAVERLRDGFAGTDSSSPAPAPGHDSAQWDGGLSSSMLASGPGDESGRPSSGDGVGGQPTFGNNSRPLLRESLPARAGVSGSFAEGDTSVLERTRYSNGRLSLHELRSVDKSRTHYSDERARPRPDDAGDQSTTAVAAAAEGGGKMAGTETQVSDQEGLFNKGGSSGSTHSGNTSRRRANDVGRPSSPGEAQRERALVTPVLTPDVGEKDDGRGPGARGETQEVGLLRLRGDRKPSLPAAVSRTASAEPLLLLSPLVRSSRSASVVGSGDGAWESFRREHSASGDNSSSSGDAGTAVTGTEDGMPAAAAAA--AESGSLFELRDALRSREEDLLRLKRDVSVVATSARGFRHLSASLGSGNVERISSFAFQRNRGHGKDASGANTDDSDLQSRNGSAFRGGGSDGSRAGGAGVDKINEEAFRPHHGGAVDGVLLRRQPADSALPGTALSFRTAATPGRPSDNELASSRRLMXXXXRQQGSTATISKGNAIIAASGSPLVASAHEGLQRMRAVLEQRALEVGRAHDDSKEMANSLSDVSARLRRSERKRNAQAAELAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDSLAETAQRLRERETEVSRLRDRLETATGELLEEQGSNASLRARLEASDEENRRARERAAAAEEEAGAATAXXXXXXXXXXXXXXXXXXAAERARREAEASAELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAGRLHVRLSSFPTPLSGFQSVRRERDSSVAEVANLTAALVLAREGQEAERGRFDRESKRAAALGEELVASEARRKVQEEEISLVRKQVSRLDAKIEGDMSRVKANSDATARATAAGAEREANSLRAGLRXXXXXXXXXXXXXXXXM----------------------ASEARAKAQAXXXXXXAQLDKDTLKRGXXXXXXXXXXXXXXXXRLLSELEHAATSAATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAFVRARKDLEGRLALAVAEAAESRAEAQRLKRKLQAVSDREDGGTPAGLGVGFSARTKRRNGGGGTRGKDDDYLFGLDGDRPHREGLQEALRESCGVMERIASALSAAAADRRTSRRPGSDGGSELDDPRWAFGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAFSVDSNRSGVGDADLRQDGFGDCAESGGEGDDLRRVVSRAEVREVAERLRFEAARLLGVRKEEQKAAGDTVASLRRDLRDSESRAAEVTARLEESRELSREQTGFVEGVWKERHRLEAELTARCEEAERLRASEDAARTAATVLDGKVADLSAALRQEQARAKREAEAAVAAEARDAMEALRQQLDDLRKEGEFQRLRAKYEKAKGRIVALEELVAASRRVSAQARREFKGALEALKLSQELLLRIHRQRQNNAVADPSDTATPATHPAAAPAPKHHHQPDAATQESHPGATEETPSAAPADLVAAAGERPASAATSSLSTDAHVHELASQASKLRGMSGNVKRLLQLAAGEVQGALEDTRDSLGVAGAAAATVGTQTAEGLDGPTREEVECFEQQVVRMKAEAQAREAEKSRLSGELSAAVXXLTKIQGLLEDKMSEAVALEAHVARLETERNEAREAASAAANDGLAEAEAXXXXXXXXXXXXLATQRELRSRCAELSLASGAFASEVAKQKEERARSQERARLATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEREVLEVESGRKERETERREKVERECKVLEARTGDLEAALAAELKKAAETGAVHEREVAGLREEATRLRESLQAEMERERGKWQAEQKAMREEIMLAREDDKASSIAKATEQGYEKGKAEEHQRTARSREREQRDLAALRKELSXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLEAALEKVTGANRSSMSHLKAEMRSVITSLDQDKEGDVEIRPGGGVARRATVHYESARRQPAEV 6147
MEEDRPW PSS+NAGSGAGRASPLNDSFKDDIQAIGRAVERLRDGFAGTDSSSPAPAPGHDSAQWDGGLSSSMLASGPGDESGRPSSGDGVGGQPT GNNSRPL+RE LPARAGVSG FAEGDTSVLERTRYS+GRLSL ELRS DKSRTHYSDERARPRPDDAGDQSTTAVAAAAEGGG+MAGT TQVSDQEGLFNKGGSSGSTHSG+TSRRRANDVG PSSPG AQRE++LVTPVLTPDVGEKDDGRGPGARGETQ VGLLRLRGDR+PSLP AVSRTASAEPLLLLSPL+RSS SASV+GSGDGAWESFRREHSASGDNSSSSGDAGTAV GTEDGMPAA AESG LFELRDALRSREEDLLRLKRDVSVVATSARGFRHLSASLGSGNVER SSF+FQR+RGHGKDASGANTDDSDL S NGSAFRGGGSDGSRAGGAGVDKINEEAFRPHHGGAV GVLLRRQPADSALPGTALSFRTAATPGRPSDNELASSRRL XXXX QQGSTAT+SKGNAIIAASGSPLVASAHEGLQRMRAVLEQRALEVGRAHDDSKEMANSL+DVSARLRRSERKRNAQAAELA+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXX SLAETAQR RLRDRLETATGE ASD+E RRARERAAAAEEEAGAATAXXXXXXXXXXXXXXXX AERA+REAEASAELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX X AEAGRLH SVRRERDSSVAEVANLTAALVLAREGQEAERGRFDRESKRAAALGEELVASEARRKVQEEEISLVRKQVSRLDAKIEGDMSRVKANSDATARATAAGAEREANSLRA XXXXXXXXXXXXXXXX ASEARAK X AQLDKDT XXXXXXXXXXXXXXXX LSELEHAATSAATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAFVRARKDLEGRLALAVAEAAESRAEAQRLKRKLQAVSDREDGGTPAGLGVGFSARTKRRNGGGGTRGKDDDYLFGLDGDRPHREGLQEALRESCGVMERIASALSAAAADRRTSRRPGSDGGSELDDPRWAFGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAFSVDSNRSGVGDADLRQDGFGDCAESGGEG DLRRVVSRAEVREVAERLRFEAARLLGVRKEE+KAAGDTVASLRRDLRDSESR AEVTARLEESRELSREQTGFVEGVWKERHRL ERLRASEDAARTAATVLDGKVADLSAALRQEQARAKREAEAAVAAEARDAMEALRQQLDDLRKEGEFQRLRAKYEKAKGRIVALEELVAASRRVSAQARREFKGALEALKLSQELLLRIHRQRQNNAVADP+DTATP THPAAAPAPKHHHQPDAAT+ESHPGA +ETPSAAPADL A AGERP SAATSSLSTDAHVHELA+QASKLRGMSGNVKRLLQLAAGEVQGALEDTRDSLGVAGAAAATVGTQTAEGLDGPTR EVEC EQQVVRMKAE QAREAEK RLSGELSAAV LTKIQGLLEDKMSEAV LEAHVARLETERNEAREAASAAANDGLAEAEA LATQRELRSRCAELSLASGAFASEVAKQKEERARSQERARLATA GERE LEVESGRKERETERREKVERECKVLEARTGDLEAALAAELKKAAETGAVHEREVAGLREEATRLRESLQAEMERERGKWQAEQKAM EEIMLAREDDKAS IAKATEQGYEKGKAEEH RTARSREREQRDLAALRKELS XXXXXXXXXXXXXXXXXXXXXXXXXQLEAALEK TGA+RSSMSHLKAEMRSVITSLDQDK GDVEIRPGGGVARRATVHYESARR PAE
Sbjct: 1 MEEDRPWVPSSDNAGSGAGRASPLNDSFKDDIQAIGRAVERLRDGFAGTDSSSPAPAPGHDSAQWDGGLSSSMLASGPGDESGRPSSGDGVGGQPTLGNNSRPLVRELLPARAGVSGIFAEGDTSVLERTRYSDGRLSLRELRSADKSRTHYSDERARPRPDDAGDQSTTAVAAAAEGGGEMAGTGTQVSDQEGLFNKGGSSGSTHSGSTSRRRANDVGGPSSPGGAQREQSLVTPVLTPDVGEKDDGRGPGARGETQAVGLLRLRGDREPSLPTAVSRTASAEPLLLLSPLIRSSTSASVLGSGDGAWESFRREHSASGDNSSSSGDAGTAVAGTEDGMPAAXXXXXXAESGPLFELRDALRSREEDLLRLKRDVSVVATSARGFRHLSASLGSGNVERSSSFSFQRSRGHGKDASGANTDDSDLPSGNGSAFRGGGSDGSRAGGAGVDKINEEAFRPHHGGAVGGVLLRRQPADSALPGTALSFRTAATPGRPSDNELASSRRLXXXXXXQQGSTATVSKGNAIIAASGSPLVASAHEGLQRMRAVLEQRALEVGRAHDDSKEMANSLNDVSARLRRSERKRNAQAAELAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSKDATAARXXXXXXXXXXG----SLAETAQRXXXXXXXXXRLRDRLETATGEXXXXXXXXXXXXXXXXASDKETRRARERAAAAEEEAGAATAXXXXXXXXXXXXXXXX---AERAQREAEASAELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAXAEAEAGRLH--------------SVRRERDSSVAEVANLTAALVLAREGQEAERGRFDRESKRAAALGEELVASEARRKVQEEEISLVRKQVSRLDAKIEGDMSRVKANSDATARATAAGAEREANSLRASXXXXXXXXXXXXXXXXXXXXNADASLKAELAAAREAEAELAASEARAKXXXXRAARAAQLDKDTXXXXXXXXXXXXXXXXXXXXXXLSELEHAATSAATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAFVRARKDLEGRLALAVAEAAESRAEAQRLKRKLQAVSDREDGGTPAGLGVGFSARTKRRNGGGGTRGKDDDYLFGLDGDRPHREGLQEALRESCGVMERIASALSAAAADRRTSRRPGSDGGSELDDPRWAFGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAFSVDSNRSGVGDADLRQDGFGDCAESGGEGHDLRRVVSRAEVREVAERLRFEAARLLGVRKEERKAAGDTVASLRRDLRDSESREAEVTARLEESRELSREQTGFVEGVWKERHRLXXXXXXXXXXXERLRASEDAARTAATVLDGKVADLSAALRQEQARAKREAEAAVAAEARDAMEALRQQLDDLRKEGEFQRLRAKYEKAKGRIVALEELVAASRRVSAQARREFKGALEALKLSQELLLRIHRQRQNNAVADPTDTATPTTHPAAAPAPKHHHQPDAATRESHPGAPDETPSAAPADLAATAGERPTSAATSSLSTDAHVHELAAQASKLRGMSGNVKRLLQLAAGEVQGALEDTRDSLGVAGAAAATVGTQTAEGLDGPTRGEVECLEQQVVRMKAEGQAREAEKLRLSGELSAAVGELTKIQGLLEDKMSEAVVLEAHVARLETERNEAREAASAAANDGLAEAEASLSDTQARLEAALATQRELRSRCAELSLASGAFASEVAKQKEERARSQERARLATAELRDLSAKFSRASKTAAADAAAERDRLERELVATRAEARDIDTDVAQVLDALASSEKERRRLEAELHRQTKAARVQRQQGEREALEVESGRKERETERREKVERECKVLEARTGDLEAALAAELKKAAETGAVHEREVAGLREEATRLRESLQAEMERERGKWQAEQKAMXEEIMLAREDDKASWIAKATEQGYEKGKAEEHHRTARSREREQRDLAALRKELSESTXXXXXXXXXXXXXXXXXXXXXXXXXQLEAALEKATGADRSSMSHLKAEMRSVITSLDQDKGGDVEIRPGGGVARRATVHYESARRHPAET 2052 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1008.117.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig1008.117.1 >prot_Ecto-sp9_F_contig1008.117.1 ID=prot_Ecto-sp9_F_contig1008.117.1|Name=mRNA_Ecto-sp9_F_contig1008.117.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=2286bp MEEDRPWAPSSNNAGSGAGRASPLNDSFKDDIQAIGRAVERLRDGFAGTDback to top mRNA from alignment at Ecto-sp9_F_contig1008:9688..22830- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig1008.117.1 ID=mRNA_Ecto-sp9_F_contig1008.117.1|Name=mRNA_Ecto-sp9_F_contig1008.117.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=13143bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1008:9688..22830- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1008:9688..22830- >mRNA_Ecto-sp9_F_contig1008.117.1 ID=mRNA_Ecto-sp9_F_contig1008.117.1|Name=mRNA_Ecto-sp9_F_contig1008.117.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=13716bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1008:9688..22830- (Ectocarpus species9 EcSCA_722f female)back to top |