mRNA_Ecto-sp9_F_contig1004.86.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig1004.86.1
Unique NamemRNA_Ecto-sp9_F_contig1004.86.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig1004.86.1 vs.
Match: Histone (acetyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7K4_ECTSI)

HSP 1 Score: 566 bits (1460), Expect = 4.310e-194
Identity = 340/382 (89.01%), Postives = 344/382 (90.05%), Query Frame = 3
Query:  654 KGGILSGSRPAXXXXXXXXXXXXXXXXXXXPEPKEANGSSNGSAVVSSNGSRKSSXXRKVGKXXXXXXXXXXXXXXXXXXSEDGPATSDRDEHPWKVGSTLEVITWNRTDRKFCDIVETAPISSMTDDPDPSKRTKYYVHYHGLNRRMDEWVGADRVTKPPSVAKAQXXXXXXXXXXXXXXXXXXXXXXXXXXIRTXXXXRKIGDTEEEEVAGAGGLGGHGGQTMHMDDDHDEHHGLDEASLKEHEEVTKVKNVNGVELGRYRMECWYFSPFPKEFYPDGYVDTLYFCEYTLRYFRHKKELLRFQRKQKPPRHPPGNEASSRAKKSRY*QIYRNGNLAMFEVDGGEQKEYGQNLCSLAKLFLDHKTLYYDVDPFLFYVLCEV 1799
            +G  LSGSRPAXXXXXXXXXXXXXXXX   PEPKEANGSSNGSAV SS+GSRKSS  RKVGK  XXXXXXXXXXXXXXXX EDGPATSDRDEHPWKVGSTLEVITWNRTDRKFCDIVETAPIS+MTDDPDP+KRTKYYVHYHGLNRRMDEWVGADRVTKPPSVAKAQ XXXXXXXXXXXXXXX          IRT    RKIGDTEEEEVAGAGGLGGHGGQTMHMDDDHDEHHGLDEASLKEHEEVTKVKNVNGVELGRYRMECWYFSPFPKEFYPDGYVDTLYFCEYTLRYFRHKKELLRFQRKQKPPRHPPGNE            IYRNGNLAMFEVDGGEQKEYGQNLCSLAKLFLDHKTLYYDVDPFLFYVLCEV
Sbjct:   44 RGASLSGSRPAXXXXXXXXXXXXXXXXAK-PEPKEANGSSNGSAVASSHGSRKSSGSRKVGKRQXXXXXXXXXXXXXXXXXEDGPATSDRDEHPWKVGSTLEVITWNRTDRKFCDIVETAPISAMTDDPDPAKRTKYYVHYHGLNRRMDEWVGADRVTKPPSVAKAQAXXXXXXXXXXXXXXXRDNSAEVDLGIRTRQQKRKIGDTEEEEVAGAGGLGGHGGQTMHMDDDHDEHHGLDEASLKEHEEVTKVKNVNGVELGRYRMECWYFSPFPKEFYPDGYVDTLYFCEYTLRYFRHKKELLRFQRKQKPPRHPPGNE------------IYRNGNLAMFEVDGGEQKEYGQNLCSLAKLFLDHKTLYYDVDPFLFYVLCEV 412          
BLAST of mRNA_Ecto-sp9_F_contig1004.86.1 vs.
Match: Histone (acetyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRG7_9STRA)

HSP 1 Score: 270 bits (689), Expect = 1.980e-78
Identity = 153/303 (50.50%), Postives = 183/303 (60.40%), Query Frame = 3
Query:  924 DEHPWK-----------VGSTLEVITWNRTDRKFCDIVETAPISSMTDDPDPSKRTKYYVHYHGLNRRMDEWVGADRVTKPPSVAKAQXXXXXXXXXXXXXXXXXXXXXXXXXXIRTXXXXRKIGDTEEEEVAGAGGLGGHGGQTMHMDDDHDEHH-GLDEASLKEHEEVTKVKNVNGVELGRYRMECWYFSPFPKEFYPDGYVDTLYFCEYTLRYFRHKKELLRFQRKQKPPRHPPGNEASSRAKKSRY*QIYRNGNLAMFEVDGGEQKEYGQNLCSLAKLFLDHKTLYYDVDPFLFYVLCE 1796
            DEHP+K           VG+ +     + T R    I+E A I+S  +   P +R +YYVH+HGLNRRMDEW+  DR   PPSVA A+                           R     RK  D  EEE+      G         DD HDEHH GLDEASLKEHEEVTKVKNVN VE G++ MECWYFSPFPKEFYPDG+ + LYFCE+T+R+FRH+ ELLR++   +  RHPPGNE            IYR+  L+MFEVDG +Q++Y Q LC LAKLFLDHKTLYYDVDPFL+YVLCE
Sbjct:  127 DEHPFKARSCHWMKCGLVGAQIIAKFVDNTAR-LATIIERAEIASAPEGAPPEQRWRYYVHFHGLNRRMDEWILPDRQVAPPSVAAAEAKAIKEARLREREAGLLGP--------RGNGAVRKGPDGVEEELVLVLATG---------DDSHDEHHDGLDEASLKEHEEVTKVKNVNWVEFGKHLMECWYFSPFPKEFYPDGHAECLYFCEFTMRFFRHRSELLRWKAHGRYARHPPGNE------------IYRDNALSMFEVDGADQRQYCQGLCYLAKLFLDHKTLYYDVDPFLYYVLCE 399          
BLAST of mRNA_Ecto-sp9_F_contig1004.86.1 vs.
Match: Tudor-knot (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIB7_9PHAE)

HSP 1 Score: 250 bits (638), Expect = 4.870e-75
Identity = 210/296 (70.95%), Postives = 214/296 (72.30%), Query Frame = 3
Query:  384 MADAPLPSSTDTDILGDYDLGGXXXXXXXXXXXXXXXELAAEGAEVEEADGTAXXXXXXXXXXXXXXXXXXXXXXXLQPADGGGRATGAGKGGILSGSRPAXXXXXXXXXXXXXXXXXXX----------PEPKEANGSSNGSAVVSSNGSRKSSXXRKVGKXXXXXXXXXXXXXXXXXXSEDGPATSDRDEHPWKV-----------------------------GSTLEVITWNRTDRKFCDIVETAPISSMTDDPDPSKRTKYYVHYHGLNRRMDEWVGADRVTKPPSVAKAQ 1154
            MADAPLPSSTDTDILGDY+LGG               ELAAEGAEVEEADG A  XXXXXXXXXXXXXX          ADG GRATGAGKGGILSGSRPAXXXXXXXXXXXXXXXXXXX          PEPKEANGSSNGSA  SSNGSR+SSXX     XXXXXXXXXXXXXXXXX     P TSDRDEHPWKV                             GSTLEVITWN TDRKFCDIVETAPISSM+DDPDP+KRTKYYVHYHGLNRRMDEWVGADRVTKPPSVAKAQ
Sbjct:    1 MADAPLPSSTDTDILGDYELGGGEGDDDIDADLAAAAELAAEGAEVEEADGMATTXXXXXXXXXXXXXX-------XXXADGSGRATGAGKGGILSGSRPAXXXXXXXXXXXXXXXXXXXXXXXXXXXAKPEPKEANGSSNGSAAASSNGSRRSSXXXXXXXXXXXXXXXXXXXXXXXX-----PTTSDRDEHPWKVVLDGGDQSNRSPTACAPPNVRDAAERQKVGSTLEVITWNGTDRKFCDIVETAPISSMSDDPDPAKRTKYYVHYHGLNRRMDEWVGADRVTKPPSVAKAQ 284          
BLAST of mRNA_Ecto-sp9_F_contig1004.86.1 vs.
Match: Histone (acetyltransferase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B6L5_9STRA)

HSP 1 Score: 243 bits (620), Expect = 1.090e-69
Identity = 143/321 (44.55%), Postives = 177/321 (55.14%), Query Frame = 3
Query:  924 DEHPWKVGSTLEVITWNRTDR-KFCDIVETA-----------------PISSMTDDPDPSK------RTKYYVHYHGLNRRMDEWVGADRVTKPPSVAKAQXXXXXXXXXXXXXXXXXXXXXXXXXXIRTXXXXRKIGDTEEEEVAGAGGLGGH------GGQTMHMDDDHDEHHGLDEASLKEHEEVTKVKNVNGVELGRYRMECWYFSPFPKEFYPDGYVDTLYFCEYTLRYFRHKKELLRFQRKQKPPRHPPGNEASSRAKKSRY*QIYRNGNLAMFEVDGGEQKEYGQNLCSLAKLFLDHKTLYYDVDPFLFYVLCE 1796
            DEHP+  G+ + ++ W   D  + C ++E                   P   +T  P  +       + +YYVH+   NRRMD+WV  +R+ +PPSV  A+                          +       K GD EE E         +         T+  D +HDEH GLDEASLKEHEEVTKVKN+  +E+GR+ ME WYFSPFPKE+YP GYVD LYFCEY+LR+F HK EL R+   ++  RHPPGNE            IYR+  LAMFEVDG E KEY QNLC LAKLFLDHKTLYYDVDPFLFYV+CE
Sbjct:   16 DEHPYSAGAMI-MVRWAVDDSPRLCQVIERTFVPAEDQLLDIMDVVEKPACDVTTTPSANPISANNGQWRYYVHFMDFNRRMDDWVEIERILEPPSVG-ARMAKEHQKGHSHLVGEKRLDQGAGKGKLSEGTKSGK-GDAEENEGPRTSRRKRNDTDDDCADPTVVADMEHDEHEGLDEASLKEHEEVTKVKNIRTIEIGRHIMETWYFSPFPKEYYPSGYVDRLYFCEYSLRFFSHKDELTRYHAVRQVDRHPPGNE------------IYRHEGLAMFEVDGTESKEYCQNLCYLAKLFLDHKTLYYDVDPFLFYVMCE 321          
BLAST of mRNA_Ecto-sp9_F_contig1004.86.1 vs.
Match: Histone (acetyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TBF8_9STRA)

HSP 1 Score: 242 bits (618), Expect = 3.140e-69
Identity = 144/298 (48.32%), Postives = 176/298 (59.06%), Query Frame = 3
Query:  924 DEHPWKVGSTLEVITW--NRTDRKFCDIVETAPISSMTDDPDPSKRTKYYVHYHGLNRRMDEWVGADRVTKPPSVAKAQXXXXXXXXXXXXXXXXXXXXXXXXXX---IRTXXXXRKIGDTEEEEVAGAGGLGGHGGQTMHMDDDHDEHHGLDEASLKEHEEVTKVKNVNGVELGRYRMECWYFSPFPKEFYPDG-YVDTLYFCEYTLRYFRHKKELLRFQRKQKPP-RHPPGNEASSRAKKSRY*QIYRNGNLAMFEVDGGEQKEYGQNLCSLAKLFLDHKTLYYDVDPFLFYVLCE 1796
            D+HP+K GS + ++ W  + TDR FCD++E A         + +    YYVHYH  NRRMDEWV    + KPPSVA A+                             IRT    ++    EE+EV  A  L            +HDEH GLDE  LKEHEEVTKVKNV  VELG+YRME WY+SPFPKE + +G  +D LYFCE ++R+F+HK EL R+  K  P  RHPPG+E            +YR+  L++FEVDGGEQK Y QNLC  AKLFLDHKTL+YDVDPFLFYVLCE
Sbjct:   61 DDHPFKRGSII-MVKWAGDGTDR-FCDVIERA-------QNEKTGEWSYYVHYHDFNRRMDEWVNIPAILKPPSVAGAEHKAMKEQLEREKELAEQAEKLCEASEEAGIRTRRQKQR--GQEEDEVPLAAHL------------EHDEHEGLDEEQLKEHEEVTKVKNVKFVELGKYRMETWYYSPFPKELFSEGPALDVLYFCEASMRFFKHKSELHRWLSKMDPKDRHPPGDE------------VYRDAKLSIFEVDGGEQKLYCQNLCYFAKLFLDHKTLFYDVDPFLFYVLCE 323          
BLAST of mRNA_Ecto-sp9_F_contig1004.86.1 vs.
Match: Histone (acetyltransferase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BN24_HYAAE)

HSP 1 Score: 228 bits (582), Expect = 9.460e-65
Identity = 158/299 (52.84%), Postives = 190/299 (63.55%), Query Frame = 3
Query:  930 HPWKVGSTLEVITWNRTDRKFCDIVETAPISSMTDDPDPSKRTKYYVHYHGLNRRMDEWV--------GADRVTKPPSVAKA-QXXXXXXXXXXXXXXXXXXXXXXXXXXIRTXXXXRKIGDTEEEEVAGAGGLGGHGGQTMHMDDDHDEHHGLDEASLKEHEEVTKVKNVNGVELGRYRMECWYFSPFPKEFYPDGYVDTLYFCEYTLRYFRHKKELLRFQRKQKPPRHPPGNEASSRAKKSRY*QIYRNGNLAMFEVDGGEQKEYGQNLCSLAKLFLDHKTLYYDVDPFLFYVLCEV 1799
            H + VG+TL V  W     + C +++ A +S          R KYYVH+HG NRRMDEW+        G D  T       A +XXXXXXXXXXXXXXXXXXXXXXXXXX RT    RK  D  E                +  +++HDEH G+D AS++EHEEVTKVKNV  VELGR+RM  WYFSPFPKE+YPDG +D L+FCE+ + +FR+K+EL   Q +    RHPPGNE            IYR+ NL++FEVDG   K Y QNLC LAKLFLDHKTLYYDVDPFLFY++CEV
Sbjct:   15 HGFSVGTTL-VARWMGKIERMCIVIDRATLSH--------DRFKYYVHWHGYNRRMDEWINEHEIVRRGTDEETLKLQERDAKEXXXXXXXXXXXXXXXXXXXXXXXXXXARTRGQKRKTPDDPE---------------FVPPEEEHDEHEGMDAASIREHEEVTKVKNVRFVELGRFRMAAWYFSPFPKEYYPDGSIDCLHFCEFCMAFFRYKRELTVHQERHMCDRHPPGNE------------IYRHENLSVFEVDGAISKVYCQNLCYLAKLFLDHKTLYYDVDPFLFYIICEV 277          
BLAST of mRNA_Ecto-sp9_F_contig1004.86.1 vs.
Match: Histone (acetyltransferase (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H3Z9_9STRA)

HSP 1 Score: 227 bits (579), Expect = 3.580e-64
Identity = 130/308 (42.21%), Postives = 170/308 (55.19%), Query Frame = 3
Query:  924 DEHPWKVGSTLEVITWNRTDRKFCDIVETAPISSMTDDPDPSKRTKYYVHYHGLNRRMDEWVGADRVTKPPSVAK------------AQXXXXXXXXXXXXXXXXXXXXXXXXXXIRTXXXXRKIGDTEEEEVAGAGGLGGHGGQTMHM------DDDHDEHHGLDEASLKEHEEVTKVKNVNGVELGRYRMECWYFSPFPKEFYPDGYVDTLYFCEYTLRYFRHKKELLRFQRKQKPPRHPPGNEASSRAKKSRY*QIYRNGNLAMFEVDGGEQKEYGQNLCSLAKLFLDHKTLYYDVDPFLFYVLC 1793
            DEHP +VG  L V+ +     +   IVE++  SS        + T+YY+HY   NRRMDEW+GA R+   PS A             A+                          +       + G       + +  +     Q   M      D +HDEH G+DE SL EHEEVTKVKN+  V+LG+Y MECWYFSPFPKE+YP+G+ + L+FCE++ R+F  K+EL+R+Q+K   PRHPPGNE            IYR+  ++MFE+DG  +K Y QNLC  AKLFLDHKTLY+DVDPFLFYVLC
Sbjct:   50 DEHPLQVGHYL-VVKYKDGSNRLAKIVESSAGSSP-------RSTQYYIHYPDFNRRMDEWIGAPRIVAYPSEANILGANREAQENAAKKLKASDSKGSLADLQPAVEVNPKLQSLLGNPTPTRSGPAGRTTKSRSNSVASVAPQAPVMAISTVADMEHDEHEGMDEESLLEHEEVTKVKNIKFVKLGKYIMECWYFSPFPKEYYPNGFAECLFFCEFSFRFFATKEELVRYQKKPNLPRHPPGNE------------IYRDSEVSMFELDGAVEKVYCQNLCYFAKLFLDHKTLYWDVDPFLFYVLC 337          
BLAST of mRNA_Ecto-sp9_F_contig1004.86.1 vs.
Match: MYST-type (HAT domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024T8M7_9STRA)

HSP 1 Score: 222 bits (566), Expect = 4.150e-63
Identity = 135/301 (44.85%), Postives = 174/301 (57.81%), Query Frame = 3
Query:  906 PATSDRDEHPWKVGSTLEVITWNRTDRKFCDIVETAPISSMTDDPDPSKRTKYYVHYHGLNRRMDEWVGADRVTKPPSVAKAQXXXXXXXXXXXXXXXXXXXXXXXXXXIRTXXXXRKIGDTEEEEVAGAGGLGGHGGQT---MHMDDDHDEHHGLDEASLKEHEEVTKVKNVNGVELGRYRMECWYFSPFPKEFYPDGYVDTLYFCEYTLRYFRHKKELLRFQRKQKPPRHPPGNEASSRAKKSRY*QIYRNGNLAMFEVDGGEQKEYGQNLCSLAKLFLDHKTLYYDVDPFLFYVLCEV 1799
            PAT+      + VGSTL  +    T+R  C +++   I+S T         KYYVH+H  NRRMDEW+ A+ V +  +  + +         XXXXXX                     GDT++      G   GH  +T       D+HDEH G+D AS++EHEEVTKVKN+  VE+G+YRM  WYFSPFPKE++PDG +D LYFCE+ L +FR+K EL   Q +    R+PPGNE            IYR+  +++FEVDG   K Y QNLC  AKLFLDHKTL+YDVDPFLFYV+CEV
Sbjct:    8 PATAATMHSGYAVGSTLVALWMGETERT-CVVIDRKEIASNT--------FKYYVHWHDFNRRMDEWINANEVVRRGTDEEIKHLQKKEHKEXXXXXXHGGGNSADQ------------GDTKD-----GGRTRGHKRKTESDFAEPDEHDEHEGMDAASIREHEEVTKVKNIRFVEIGKYRMAAWYFSPFPKEYFPDGSIDCLYFCEFCLTFFRYKTELRHHQERVACARYPPGNE------------IYRHEGISVFEVDGAISKPYCQNLCYFAKLFLDHKTLHYDVDPFLFYVMCEV 270          
BLAST of mRNA_Ecto-sp9_F_contig1004.86.1 vs.
Match: Histone (acetyltransferase n=10 Tax=Aphanomyces TaxID=100860 RepID=A0A024T7W5_9STRA)

HSP 1 Score: 222 bits (566), Expect = 1.670e-62
Identity = 135/301 (44.85%), Postives = 174/301 (57.81%), Query Frame = 3
Query:  906 PATSDRDEHPWKVGSTLEVITWNRTDRKFCDIVETAPISSMTDDPDPSKRTKYYVHYHGLNRRMDEWVGADRVTKPPSVAKAQXXXXXXXXXXXXXXXXXXXXXXXXXXIRTXXXXRKIGDTEEEEVAGAGGLGGHGGQT---MHMDDDHDEHHGLDEASLKEHEEVTKVKNVNGVELGRYRMECWYFSPFPKEFYPDGYVDTLYFCEYTLRYFRHKKELLRFQRKQKPPRHPPGNEASSRAKKSRY*QIYRNGNLAMFEVDGGEQKEYGQNLCSLAKLFLDHKTLYYDVDPFLFYVLCEV 1799
            PAT+      + VGSTL  +    T+R  C +++   I+S T         KYYVH+H  NRRMDEW+ A+ V +  +  + +         XXXXXX                     GDT++      G   GH  +T       D+HDEH G+D AS++EHEEVTKVKN+  VE+G+YRM  WYFSPFPKE++PDG +D LYFCE+ L +FR+K EL   Q +    R+PPGNE            IYR+  +++FEVDG   K Y QNLC  AKLFLDHKTL+YDVDPFLFYV+CEV
Sbjct:    8 PATAATMHSGYAVGSTLVALWMGETERT-CVVIDRKEIASNT--------FKYYVHWHDFNRRMDEWINANEVVRRGTDEEIKHLQKKEHKEXXXXXXHGGGNSADQ------------GDTKD-----GGRTRGHKRKTESDFAEPDEHDEHEGMDAASIREHEEVTKVKNIRFVEIGKYRMAAWYFSPFPKEYFPDGSIDCLYFCEFCLTFFRYKTELRHHQERVACARYPPGNE------------IYRHEGISVFEVDGAISKPYCQNLCYFAKLFLDHKTLHYDVDPFLFYVMCEV 270          
BLAST of mRNA_Ecto-sp9_F_contig1004.86.1 vs.
Match: MYST-type (HAT domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482STE9_9ARCH)

HSP 1 Score: 221 bits (562), Expect = 2.190e-62
Identity = 128/290 (44.14%), Postives = 160/290 (55.17%), Query Frame = 3
Query:  924 DEHPWKVGSTLEVITWNRTDRKFCDIVETAPISSMTDDPDPSKRTKYYVHYHGLNRRMDEWVGADRVTKPPSVAKAQXXXXXXXXXXXXXXXXXXXXXXXXXXIRTXXXXRKIGDTEEEEVAGAGGLGGHGGQTMHMDDDHDEHHGLDEASLKEHEEVTKVKNVNGVELGRYRMECWYFSPFPKEFYPDGYVDTLYFCEYTLRYFRHKKELLRFQRKQKPPRHPPGNEASSRAKKSRY*QIYRNGNLAMFEVDGGEQKEYGQNLCSLAKLFLDHKTLYYDVDPFLFYVLC 1793
            D HP KVG  L V   + +DR    IVE +P            + +YY+HY   NRRMDEWV ADR+   PS+A  +                                     D     +            +   D DHDEH GLDE SL EHE+VTKVKN+  V+LG+Y MECWYFSPFP+E+YP G+ D LYFCE+++R+FR K+EL+R+Q K    R+PPGNE            IYR+ N++ FE+DG  +K Y QNLC  AKLFLDHKTLY+DVD FLFYVLC
Sbjct:  154 DIHPLKVGHHLIVRYRDGSDR-LARIVEVSP------------QQQYYIHYLDFNRRMDEWVAADRILHLPSIANRRALDYCTSSPVDPMSNPRI-------------------DASSTHIL-----------STVADLDHDEHEGLDEESLLEHEKVTKVKNIRTVQLGKYIMECWYFSPFPREYYPTGFTDCLYFCEFSMRFFRTKQELVRYQTKPGLNRYPPGNE------------IYRDENVSFFELDGAVEKIYCQNLCYFAKLFLDHKTLYWDVDQFLFYVLC 388          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1004.86.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Histone4.310e-19489.01acetyltransferase n=1 Tax=Ectocarpus siliculosus T... [more]
Histone1.980e-7850.50acetyltransferase n=1 Tax=Tribonema minus TaxID=30... [more]
Tudor-knot4.870e-7570.95domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Histone1.090e-6944.55acetyltransferase n=1 Tax=Dictyocha speculum TaxID... [more]
Histone3.140e-6948.32acetyltransferase n=2 Tax=Monodopsidaceae TaxID=42... [more]
Histone9.460e-6552.84acetyltransferase n=1 Tax=Hyaloperonospora arabido... [more]
Histone3.580e-6442.21acetyltransferase (Fragment) n=1 Tax=Spumella elon... [more]
MYST-type4.150e-6344.85HAT domain-containing protein n=2 Tax=Aphanomyces ... [more]
Histone1.670e-6244.85acetyltransferase n=10 Tax=Aphanomyces TaxID=10086... [more]
MYST-type2.190e-6244.14HAT domain-containing protein n=1 Tax=archaeon Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1004contigEcto-sp9_F_contig1004:306..7778 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score471.9
Seed ortholog evalue3.2e-130
Seed eggNOG ortholog2880.D7G7K4
KEGG koko:K11304,ko:K11308
KEGG Pathwayko05166,map05166
GOsGO:0000123,GO:0002376,GO:0002520,GO:0003674,GO:0003824,GO:0004402,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006139,GO:0006259,GO:0006281,GO:0006325,GO:0006355,GO:0006464,GO:0006473,GO:0006475,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007275,GO:0008080,GO:0008134,GO:0008150,GO:0008152,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009987,GO:0010224,GO:0010468,GO:0010485,GO:0010506,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016043,GO:0016407,GO:0016410,GO:0016569,GO:0016570,GO:0016573,GO:0016740,GO:0016746,GO:0016747,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019219,GO:0019222,GO:0019538,GO:0030097,GO:0030099,GO:0030154,GO:0031248,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031329,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0033554,GO:0034212,GO:0034641,GO:0034708,GO:0035064,GO:0035097,GO:0036211,GO:0042393,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043543,GO:0043967,GO:0043981,GO:0043982,GO:0043984,GO:0043995,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044665,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0046483,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048580,GO:0048583,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051239,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051716,GO:0060255,GO:0061733,GO:0065007,GO:0070013,GO:0071339,GO:0071704,GO:0071840,GO:0072487,GO:0080090,GO:0090304,GO:0140030,GO:0140034,GO:1901360,GO:1901564,GO:1902493,GO:1902494,GO:1902562,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990234,GO:2000026,GO:2000028,GO:2000112,GO:2000113,GO:2000241,GO:2001141
EggNOG free text desc.histone acetyltransferase activity
EggNOG OGsCOG5027@1,KOG2747@2759
EC2.3.1.48
COG Functional cat.B
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03036
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionMOF-like MYST family histone acetyltransferase
Ec32 orthologEc-22_002080.1
Exons10
Model size1799
Cds size1257
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1004.86.1prot_Ecto-sp9_F_contig1004.86.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig1004 465..6043 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928196.1202433-UTR-Ecto-sp9_F_contig1004:305..4641622928196.1202433-UTR-Ecto-sp9_F_contig1004:305..464Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1004 306..464 -
1692277790.1580307-UTR-Ecto-sp9_F_contig1004:305..4641692277790.1580307-UTR-Ecto-sp9_F_contig1004:305..464Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1004 306..464 -
1622928196.2696323-UTR-Ecto-sp9_F_contig1004:6043..61931622928196.2696323-UTR-Ecto-sp9_F_contig1004:6043..6193Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1004 6044..6193 -
1692277790.3107796-UTR-Ecto-sp9_F_contig1004:6043..61931692277790.3107796-UTR-Ecto-sp9_F_contig1004:6043..6193Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1004 6044..6193 -
1622928196.2861745-UTR-Ecto-sp9_F_contig1004:7545..77781622928196.2861745-UTR-Ecto-sp9_F_contig1004:7545..7778Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1004 7546..7778 -
1692277790.318856-UTR-Ecto-sp9_F_contig1004:7545..77781692277790.318856-UTR-Ecto-sp9_F_contig1004:7545..7778Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1004 7546..7778 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928196.1329534-CDS-Ecto-sp9_F_contig1004:464..4661622928196.1329534-CDS-Ecto-sp9_F_contig1004:464..466Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1004 465..466 -
1692277790.1798937-CDS-Ecto-sp9_F_contig1004:464..4661692277790.1798937-CDS-Ecto-sp9_F_contig1004:464..466Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1004 465..466 -
1622928196.1461394-CDS-Ecto-sp9_F_contig1004:1281..13881622928196.1461394-CDS-Ecto-sp9_F_contig1004:1281..1388Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1004 1282..1388 -
1692277790.1933055-CDS-Ecto-sp9_F_contig1004:1281..13881692277790.1933055-CDS-Ecto-sp9_F_contig1004:1281..1388Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1004 1282..1388 -
1622928196.155616-CDS-Ecto-sp9_F_contig1004:1757..18791622928196.155616-CDS-Ecto-sp9_F_contig1004:1757..1879Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1004 1758..1879 -
1692277790.2068284-CDS-Ecto-sp9_F_contig1004:1757..18791692277790.2068284-CDS-Ecto-sp9_F_contig1004:1757..1879Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1004 1758..1879 -
1622928196.1689024-CDS-Ecto-sp9_F_contig1004:2324..24741622928196.1689024-CDS-Ecto-sp9_F_contig1004:2324..2474Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1004 2325..2474 -
1692277790.2376184-CDS-Ecto-sp9_F_contig1004:2324..24741692277790.2376184-CDS-Ecto-sp9_F_contig1004:2324..2474Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1004 2325..2474 -
1622928196.1797688-CDS-Ecto-sp9_F_contig1004:3314..34181622928196.1797688-CDS-Ecto-sp9_F_contig1004:3314..3418Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1004 3315..3418 -
1692277790.2550023-CDS-Ecto-sp9_F_contig1004:3314..34181692277790.2550023-CDS-Ecto-sp9_F_contig1004:3314..3418Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1004 3315..3418 -
1622928196.19556-CDS-Ecto-sp9_F_contig1004:3862..40061622928196.19556-CDS-Ecto-sp9_F_contig1004:3862..4006Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1004 3863..4006 -
1692277790.2739131-CDS-Ecto-sp9_F_contig1004:3862..40061692277790.2739131-CDS-Ecto-sp9_F_contig1004:3862..4006Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1004 3863..4006 -
1622928196.2152853-CDS-Ecto-sp9_F_contig1004:4644..47141622928196.2152853-CDS-Ecto-sp9_F_contig1004:4644..4714Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1004 4645..4714 -
1692277790.2815244-CDS-Ecto-sp9_F_contig1004:4644..47141692277790.2815244-CDS-Ecto-sp9_F_contig1004:4644..4714Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1004 4645..4714 -
1622928196.2265174-CDS-Ecto-sp9_F_contig1004:5240..53511622928196.2265174-CDS-Ecto-sp9_F_contig1004:5240..5351Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1004 5241..5351 -
1692277790.2900908-CDS-Ecto-sp9_F_contig1004:5240..53511692277790.2900908-CDS-Ecto-sp9_F_contig1004:5240..5351Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1004 5241..5351 -
1622928196.2534845-CDS-Ecto-sp9_F_contig1004:5596..60431622928196.2534845-CDS-Ecto-sp9_F_contig1004:5596..6043Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1004 5597..6043 -
1692277790.2991781-CDS-Ecto-sp9_F_contig1004:5596..60431692277790.2991781-CDS-Ecto-sp9_F_contig1004:5596..6043Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1004 5597..6043 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig1004.86.1

>prot_Ecto-sp9_F_contig1004.86.1 ID=prot_Ecto-sp9_F_contig1004.86.1|Name=mRNA_Ecto-sp9_F_contig1004.86.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=419bp
MADAPLPSSTDTDILGDYDLGGGGGDDDIDADLAAAAELAAEGAEVEEAD
GTATTAAAAAAAAAAAAAALPAAATALQPADGGGRATGAGKGGILSGSRP
AASGGGSAELMPPPPPAAAKPEPKEANGSSNGSAVVSSNGSRKSSGSRKV
GKRQGGSSNKSGGRSSHGGRSEDGPATSDRDEHPWKVGSTLEVITWNRTD
RKFCDIVETAPISSMTDDPDPSKRTKYYVHYHGLNRRMDEWVGADRVTKP
PSVAKAQAKAQKEETERARKEFERDNSSEVDLGIRTRRQKRKIGDTEEEE
VAGAGGLGGHGGQTMHMDDDHDEHHGLDEASLKEHEEVTKVKNVNGVELG
RYRMECWYFSPFPKEFYPDGYVDTLYFCEYTLRYFRHKKELLRFQRKQKP
PRHPPGNEASSRAKKSRY*
back to top

mRNA from alignment at Ecto-sp9_F_contig1004:306..7778-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig1004.86.1 ID=mRNA_Ecto-sp9_F_contig1004.86.1|Name=mRNA_Ecto-sp9_F_contig1004.86.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=7473bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1004:306..7778- (Ectocarpus species9 EcSCA_722f female)
GGAGGCGGAAGGAGGCACAGAGATCTATCCATTGCGCTGTACTCGGTCTT CGGCAACTGGTGGAAGCCGACCGAAGCAAGCGGGAAGCAAGAGAGACTGA GGCGACGAGAAAAAGGCTAATACGTCGTCTTGCTGGCTGCCTTTTTTTCA AAACCACCAAGAGGCGGCGCTTGGAGTAGGTCGCAACTCGCAGGCTCGCC AACAAGTTGGTGGAGTCCACCGCAGCAGAGGAGGTGAGGAGGAAGAGAGC AAGCGTTCACTCCGTGCACCTCGTAGTTGGACGAGACGAAGATATCCAGT ATCCAGGTAGAGAGATCCGTCAAGCTTGAGTAAATCTAATTGCGCCGCAT TTTTGTCAGAGAAAAGGGGAAAAGTGTCGATCTGTCGCTTGGTCTCTTCG AAACACGGACCTAGATATGCATATGCACCGACTTAAAGCAGCATAATTTT TAGCGCGATTGATTCTCACCTTTATCCAGCGGGTCGTCGGCTACAAGCTA TGCTATGCCCAAAAATAGTGGTCCTGGATAGAGACGCGCAATTGTTTGTG ACCTAAATTTTGGATGTTTTGTTTTGCACAAATCGACGCAGGTTGGTTGT ACCCATCATGTGTACGGTATTAGGAAAAATAAGTATAAACACAGAGAGAC TACCCCATTCGAGATATATTCACAGTCGGGATGTGTTGCAGTCTTTACAG TGAATGGAGGGAAACCGGCTGTGTATGCATGAAAATTGCACAAGGTGGGC GCATCTGACGGAGTGAGACTTCCCTCTACTGGCACCGACAATCGCACCAA ATTACGCGTCGCCGCACGCAACTATGTCAATCCCCCCCCCCCAGTTGGCA TACGCATGTTCGAGCCTCTACGCGGAGCACATTGTACACCCTATACTTTC ATTCGTAGACACCCCCCCCCCCTCCCTATGAAATCGGGCCGGCGTGGGGT CACGCCTACGCACGAGTACACCGCCAGAAGCAACAGGTCAACTGAGACAG TATTGTTGAGGAAAACAGTCGATCGGGCAGTTTTCGAGAGAGGGTTCTCT ACATGTCGAACCTCTCCATCGACAAGGTCGGACACGTATTCGCCTAGGAT AAATTTCTCTTCAAGTTGTCAAACGGTTTTTGGCCTCTATGTACTAAGGG GGTTCATAGTTGGTGGCGAATCAAACAGCAGCACCAATAGCAGACACTTG CCTCTTGCTTGCTTGGGACTCGTACCCTCTACGATCACAAGCGCATATGC ATGCACGACCCCCTCTTCTTACGGTGCAGCTGCTGCTGTGTGCGCCTGGC TTGAAAGAACGGACTGCTGCTATATCGGCAACCATCTTATGAGAGGATAA TCTTTAATTCTCGATCGAGCTTCTATTCGATTTTCGTCTTCTTCGTGGGG TTTTCGAAAATTGTGGCAACATTTCTTCGGACCTCCCGCTGCTGTGTCAA TATACATGGCCCTCTGCCGTCCCTTTCCCCCCCCCCCCCCCCCCCCCCCC CCCCCCTGCCGCCACCCCAATATCTGTGGCCCCATGCAAAACCACCTCTA TTTACCCGGCTCGCTCTACCCTGTTTCCCAACCAGGTTCACGCCTCCCTT CTTCGGCCCCGACACACACATAGGCAGCAGCGTCTGCACAGCAGGTCAAC GGAAGCGTGTGACGGCTCAAGGCAGCAACAGTAGCAGCAGCAGCAGCAGC AACAGCAATAGCAACAGCAACAGTAGCGGCAGGAAATGGCGGATGCTCCG CTCCCATCCTCGACGGACACCGACATCCTCGGCGACTACGACCTCGGCGG CGGCGGGGGTGACGACGACATCGACGCCGACTTGGCCGCGGCGGCCGAGC TCGCGGCAGAGGGCGCCGAAGTCGAGGAGGCCGATGGGACGGCCACAACC GCCGCGGCCGCCGCCGCCGCCGCCGCCGCCGCTGCCGCGGCGCTGCCGGC GGCGGCGACGGCGTTACAACCTGCTGACGGCGGCGGCAGGGCCACGGGTG CAGGAAAGGGGGGCATCTTGAGCGGCAGCAGGCCGGCGGCTAGCGGTGGC GGCTCCGCGGAGCTGATGCCGCCACCGCCGCCGGCGGCGGCGAAGCCGGA GCCGAAGGAGGCTAACGGGAGCAGCAACGGGAGTGCCGTCGTGAGCAGTA ACGGGAGCAGGAAGAGCTCGGGCTCGCGCAAGGTGTGTGTGTGTGTTGCC AGAAACATGTATGTATCCGTCCTGGTTTGTTGTGTTGGTTTAAGTTGTAT GCGCTACAGCGGGCGAGACTTGTCGTTTTTTGCAGCGTACAACTGCGAAA GTGGACTCAAGCGTGGAAAGTGGTTTGAAGTGTCCTCCGAAATGCACATG CAACACTGCTCATTTTGCTTGCTCTCCGCCTTCCCCTTCGCGTGAACTCC CCCGGCCCGGCCCGACCCTTCCCCCAGGTGGGTAAGAGACAGGGGGGCTC TAGTAACAAGAGCGGGGGGCGAAGCAGCCATGGGGGGCGGTCGGAGGATG GACCGGCCACGAGTGATAGGGACGAGCATCCGTGGAAGGTGAGGGGTTTT CATCCGGCTGGCTGTGCATACACCGAACCCGGGGGGGCGGGGGGCGAGGA CTCAACCACTGTTGGTACGGAACTCGCTACAACCCAATGGAAAAGGAAAA CTCTTGGGAGTTGAGGAATTCACGCTCCAAAAAACGAGAATGGTCCCTAC AATGGGACTTATATAATAGTCAATGTTGAGTAACCCCACAGACGGGATAA GAAAGATGAGAGTTTCTTGAGACGTGGCGCGTTCCTACATATGAGTAGTG TTTTTTGTATTTCTATTTTTCATCGTTGATTTCGTTGTTGTTGCGGTTGT CGACGCCGTCCTTGATGTTGTTTTGGACCGACCGACCGACCAGCGTTTCA AGTTTCTGCTTGTTCGGGTGCGAACTGCGTAAAACTCAGCTCTGCGGCGA GTTCTATGCTCGACCCTGCATTGTAGGTTGTGCTCGACTTTGGCGACCAA TCTAATCGTTTCCCGACTGCGTGCGGCCCCCCGAATGTACGGGACGCGGC GGAACGCCAAAAAGGTTGGGTCTACGCTGGAGGTTATCACGTGGAACAGA ACGGACCGGAAGTTCTGCGACATCGTTGAAACCGGTAAGTCTGGATACCC AGGGCGTTTATAGTGTTTCCCTCCCGCAGTTGTTGGACTTTTCCTTCGAC TTGCCTCTTACTCGCATCTTAAAAGCGAGCGTCTCCCTTGAAGTATGCTC ACTCATGCCACCATTTTTTTCTCTTGCGTCTGTGGAGTCCTCCCCCTCCT CTCTCTTCTTCTCTCCCTCTGTTTCTCCTCGCGCGCCTGTGCTTTGCTGA TGACTCTTAGCGTGTCGCCGCACCTCCGTTAGCAACCCTGTCGTGGAACG AGCGCCGACGCGAGAGGACCCGTTTTTGTCTCCCTTTGCGCAATCAGGTT TTTCCTAACTTAAATAACTGGCTGCTTGTGCTAACCGACCGCAAGGTGAT AAGAATGGCCCATCAACGAAAGTACTTGGTGTGGGAAAGAACGTCTACGG TATCATACCTCGACTGCTCTGCACGCTTTGGTACATGCCGTACACTAGCT TTTCACGCCCTGGCTTACCCTTGACGAGGGCGCCACACGACACGCTTGTT TTTTATTCCTTTTGGTGTGTCGCCCGACTCATGTACCGGGCTCACACCTA CCTGCTTATGTATGTCTCACCGTCTTCCTTTTCTGCTACCTGACCTCGGC AAAACGGTTTGCGGCGGCGCAGCCCCCATCTCGTCTATGACGGACGACCC GGACCCTTCCAAGCGAACCAAGTACTACGTGCACTACCACGGGCTCAACA GACGGATGGACGAGTGGGTCGGGGCGGACCGGGTGACCAAGCCGCCATCG GTGGCTAAGGCGCAAGGTGAGCTATATGAAGCACGAACGCCTGCACGATG TCTGCACATTTTTCGGGGGTGATAACAGAGAGAGGCATATGGCCAAGCTG CCATCGGCGGCCAAAGCGCGAGGTGAGACAAGGCAAGACCGCCTACACCA TGCCTGTTTATTTTGGGGGGGTGACGGCGATGGTAGCAGGGGCGGGGGGG GTACTATGTGACCAAGCCGAGGTGAGCTAGGCTTAAGAACGCCTGCGCCA TGTCTGTTTATTTTGGGGGGGTGACGACGGGGTAGCAGGGGTGGGACCAT GTGACCACTCGCTGTCGTAGGCGGCAAACGTGCAAGAGGAGACGACAGCA CCACATTGTACCTGCTTGTGACGATTAGGGCACACTAGTAGGGGAAGGGG ACGACCGTGCGACTTCTGAACCTTCCGGTAACCCCAAACTGTGTCCTTTT GCCGGCGCAGCCAAGGCGCAGAAGGAAGAGACGGAGCGGGCCCGGAAAGA GTTCGAGCGGGACAACTCTTCGGAAGTTGACCTGGGGATTCGCACCCGTC GGCAGAAGCGAAAGGTACGGGTGTCTCGCCCTTGCTCTCCGTCTCCTGTT TGCCGCGCGTCCTTGTGCGCATCGACAGTCGGCTTGCCCAGGAAACGGGG GGGGGGGGGGGGGGGGGGGGGGGGGGGGCTTCGTGTGTGTGGTGGGGGGG GTTTTTTTTTTTTTTTTTTTTTTTTGTGGNNNNNNNNNNGTGGGGGGGGG GGGGGGGCGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG GACAATGGGCGCTTGCCCTGTGCTTGTGTTGGCGGCTTTCTTTCTTATTC AATTTTTGATGGCAGCGGTGGCGCCGCATTTCTATCCGACACGCGCCCAC CTCTAGAGAGACGATTTCACATTCACGCCTTGCTTTGCTCGTAGTGTTGG TAGCAATAGTTCCGATTTGATGATGGTCTCTTCTTGACCTGGACCAGCTC GAGTGTTTACCGTAGAGGTACTAATTAATTTCGCTTTGTCGTCGAGGTTG TACCGGAAAATGAAATACGGAAGTTTCACATTTCCAGAAACTGAGACGCT TTCGACGGCAAGTCCATGGCAAGGTTTTCTTATTTTGATTTGCAGATGAG ACATTCAGAACCAACGTGCTTGCGCCTGCGGACGGACTTCGAGGCGCATG TTGGGCAAACCAGTTTTTTTTTTATTTTGTTCTGGCCGTTTCGACCGTCA CTTCGACTTTTTTTCCGTGTCTTGAGGTTGGACGAATTGATGCTGTTGTT CCTTGGTCAATTTTTACGACACGTTTAAGGATTCTTTCAACTCTTTTGTT CCCATGCCCGCACCCCTTATCCCGCCCCACTTGCTGTTATGCCATGGTAT GTAGATCGGAGACACGGAAGAAGAAGAGGTGGCCGGGGCGGGAGGCCTGG GGGGTCACGGCGGGCAGACGATGCACATGGACGACGATCACGATGAGCAC CATGGTCTGGACGAGGCGTCTCTCAAGGAGCACGAGGAGGTCACCAAGGT CAAGGTGAGATACATAGATAGATAGATGAACATACGATCGGACTCAGAGT CTAGACGGCAACGTCGTCTCAATCAACACGGGAGGTCACCAAGGTCAAGG TGAGATACATAGATGGAAGAATATGGTGAAATGCTCAGCAAGATCGGCCG TTACCGGGCGAGCGTCTGTGCGTGCTATTATAGAGTGTTACTCTCCCCCA TAGCCGAATCGTTTTGTTTCGAGGAGAAAAAAAACGGTGTGAGTGAAATG TATAAAGGGAGAGGTTTCTTGTCCAAAGTCGTCACCGAGCAAGAGGGAAA GTTGAAGAACAAAGTATCGAACGCAACTTCAGTAGGTCGAAGAATTGAAT CGAATCAAACGTGAAGCTCGAAGAATGGTACATCGAAGCTCGAAGAAATG AGAATCGAAATCAAATGTGAAGCTCCAAGAATTAAATATTTTTGTGCAGA ACGTGAACGGGGTAGAGCTCGGGCGATACCGGATGGAGTGCTGGTACTTC TCCCCCTTCCCCAAGGAGTTCTACCCGGATGGCTACGTGGACACCCTCTA CTTCTGCGAGTACACTCTCAGGTGACTCAGGCGTTTTTTCGTTCGGGGGG ATGTACTCGGAATAGCGAGCACTTTCCTTGTCATGCCGCCTCCGAGTGTG CATAAAATCCGAGGCCAGGATTCGCATTGACGGAAACGGCGCTTCTGCGA TGCCTGCGCGTCTAACGACGAACTGCCGCTGCCGCGGTCATCCAACTATT GCTGATGGCTGGCGATACTATTGCTGTTTTTTCAATAATTCGCTTCGTGT ATGCTGTTCGATTTGGACGTGATTGCCTAGGTGGGATTGTGGTCGTTGCT ATTTATTCTGGTACACCGTCGTTGAGCTGGATACATTTATTGTGTTGCTG GATACCGTTTTTTTTTTTTCCTGCGTATCGGTGCCACCAGATACTTCCGT CACAAGAAGGAGCTTCTTCGGTTTCAGAGGAAGCAGAAACCACCCCGACA CCCTCCGGGCAACGAGGCAAGCTCCAGAGCAAAAAAATCTAGATATTGTA GCACGCGCGAGTTTTCTCTGTTACCTGGAGGGGGGCTTAGATTATTTATT GGGCGATGAGGTGCTACTGAAAGCGGCGCGACCTTGTCGTAGGCACTGCT GTGGTCGTAGCCGTCCTCCCCTTTCCCCCTAAACGTCTGTGTCTAGCATC GCCGAATTTCGGTGTCTAGTACCACGCTGCGTTCTCGTGTGCATCGTAGT TACCTTCTGATGAAAGCCCCATGTGGTTTGCACTGTCCACGTCCGACAGT CCTCTGCCCGCCTCACTGCTCGGCTCTGGGTGCCCACCTTTTGTTGCCCC CCCAAATTCCTCACGGCGTTTCGCGCTTGGTGACGTGATGTCATAGCCTG GTCCGGTGAGAACCCAGCGTGCCCCGTCCCGGCTTCGTAGGGATGCGAGG TCAATGGTCTAACGACTACGGCGTGCACGACTATGAGTACATCCCCCCCC CTCGTTCTCATTATGTCTGTGTGTACGGATACCCATTTTGTATGTACATT TTGGATTTGTTCCGCTTCGGACTTTACGACCCGTAGCAGACGGCTCACCA CCAACCCCCAAACCGGCGGAAACCCAGAGGATCGTCCCGTCCTTTCCCTT CATTTAAGTGTATGTTTCTTTTTGGCCTATTTCGTCTTTGATCGTCTCCC TCCTTCCTTCGTAACTCTCTTGTTCGTGGTCTCTTTTGATCTGTTTACAA CTCCATCTACATGGTAAGCCTCTCCTATTTTTTTTGCCTTGTTTGTTCTC GTGTGCGTGTTCTGTCCCTCCCTTTGCCCTTGCCCACCCTGGCTTCCGTC GGTGCTGGGGAGAGCAGATCTACCGCAACGGCAACCTTGCCATGTTCGAG GTGGACGGGGGGGAACAGAAGGAGTACGGCCAGAACCTGTGCTCTCTGGC CAAGCTATTCTTGGACCACAAGACCTTGTACTACGACGTAGACCCCTTCC TCTTCTACGTCCTGTGCGAGGTC
back to top

Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1004:306..7778-

>mRNA_Ecto-sp9_F_contig1004.86.1 ID=mRNA_Ecto-sp9_F_contig1004.86.1|Name=mRNA_Ecto-sp9_F_contig1004.86.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2514bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1004:306..7778- (Ectocarpus species9 EcSCA_722f female)
ATGGCGGATGCTCCGCTCCCATCCTCGACGGACACCGACATCCTCGGCGA
CTACGACCTCGGCGGCGGCGGGGGTGACGACGACATCGACGCCGACTTGG
CCGCGGCGGCCGAGCTCGCGGCAGAGGGCGCCGAAGTCGAGGAGGCCGAT
GGGACGGCCACAACCGCCGCGGCCGCCGCCGCCGCCGCCGCCGCCGCTGC
CGCGGCGCTGCCGGCGGCGGCGACGGCGTTACAACCTGCTGACGGCGGCG
GCAGGGCCACGGGTGCAGGAAAGGGGGGCATCTTGAGCGGCAGCAGGCCG
GCGGCTAGCGGTGGCGGCTCCGCGGAGCTGATGCCGCCACCGCCGCCGGC
GGCGGCGAAGCCGGAGCCGAAGGAGGCTAACGGGAGCAGCAACGGGAGTG
CCGTCGTGAGCAGTAACGGGAGCAGGAAGAGCTCGGGCTCGCGCAAGATG
GCGGATGCTCCGCTCCCATCCTCGACGGACACCGACATCCTCGGCGACTA
CGACCTCGGCGGCGGCGGGGGTGACGACGACATCGACGCCGACTTGGCCG
CGGCGGCCGAGCTCGCGGCAGAGGGCGCCGAAGTCGAGGAGGCCGATGGG
ACGGCCACAACCGCCGCGGCCGCCGCCGCCGCCGCCGCCGCCGCTGCCGC
GGCGCTGCCGGCGGCGGCGACGGCGTTACAACCTGCTGACGGCGGCGGCA
GGGCCACGGGTGCAGGAAAGGGGGGCATCTTGAGCGGCAGCAGGCCGGCG
GCTAGCGGTGGCGGCTCCGCGGAGCTGATGCCGCCACCGCCGCCGGCGGC
GGCGAAGCCGGAGCCGAAGGAGGCTAACGGGAGCAGCAACGGGAGTGCCG
TCGTGAGCAGTAACGGGAGCAGGAAGAGCTCGGGCTCGCGCAAGGTGGGT
AAGAGACAGGGGGGCTCTAGTAACAAGAGCGGGGGGCGAAGCAGCCATGG
GGGGCGGTCGGAGGATGGACCGGCCACGAGTGATAGGGACGAGCATCCGT
GGAAGGTGGGTAAGAGACAGGGGGGCTCTAGTAACAAGAGCGGGGGGCGA
AGCAGCCATGGGGGGCGGTCGGAGGATGGACCGGCCACGAGTGATAGGGA
CGAGCATCCGTGGAAGGTTGGGTCTACGCTGGAGGTTATCACGTGGAACA
GAACGGACCGGAAGTTCTGCGACATCGTTGAAACCGGTTGGGTCTACGCT
GGAGGTTATCACGTGGAACAGAACGGACCGGAAGTTCTGCGACATCGTTG
AAACCGCCCCCATCTCGTCTATGACGGACGACCCGGACCCTTCCAAGCGA
ACCAAGTACTACGTGCACTACCACGGGCTCAACAGACGGATGGACGAGTG
GGTCGGGGCGGACCGGGTGACCAAGCCGCCATCGGTGGCTAAGGCGCAAG
CCCCCATCTCGTCTATGACGGACGACCCGGACCCTTCCAAGCGAACCAAG
TACTACGTGCACTACCACGGGCTCAACAGACGGATGGACGAGTGGGTCGG
GGCGGACCGGGTGACCAAGCCGCCATCGGTGGCTAAGGCGCAAGCCAAGG
CGCAGAAGGAAGAGACGGAGCGGGCCCGGAAAGAGTTCGAGCGGGACAAC
TCTTCGGAAGTTGACCTGGGGATTCGCACCCGTCGGCAGAAGCGAAAGCC
AAGGCGCAGAAGGAAGAGACGGAGCGGGCCCGGAAAGAGTTCGAGCGGGA
CAACTCTTCGGAAGTTGACCTGGGGATTCGCACCCGTCGGCAGAAGCGAA
AGATCGGAGACACGGAAGAAGAAGAGGTGGCCGGGGCGGGAGGCCTGGGG
GGTCACGGCGGGCAGACGATGCACATGGACGACGATCACGATGAGCACCA
TGGTCTGGACGAGGCGTCTCTCAAGGAGCACGAGGAGGTCACCAAGGTCA
AGATCGGAGACACGGAAGAAGAAGAGGTGGCCGGGGCGGGAGGCCTGGGG
GGTCACGGCGGGCAGACGATGCACATGGACGACGATCACGATGAGCACCA
TGGTCTGGACGAGGCGTCTCTCAAGGAGCACGAGGAGGTCACCAAGGTCA
AGAACGTGAACGGGGTAGAGCTCGGGCGATACCGGATGGAGTGCTGGTAC
TTCTCCCCCTTCCCCAAGGAGTTCTACCCGGATGGCTACGTGGACACCCT
CTACTTCTGCGAGTACACTCTCAGAACGTGAACGGGGTAGAGCTCGGGCG
ATACCGGATGGAGTGCTGGTACTTCTCCCCCTTCCCCAAGGAGTTCTACC
CGGATGGCTACGTGGACACCCTCTACTTCTGCGAGTACACTCTCAGATAC
TTCCGTCACAAGAAGGAGCTTCTTCGGTTTCAGAGGAAGCAGAAACCACC
CCGACACCCTCCGGGCAACGAGGCAAGCTCCAGAGCAAAAAAATCTAGAT
ATTATACTTCCGTCACAAGAAGGAGCTTCTTCGGTTTCAGAGGAAGCAGA
AACCACCCCGACACCCTCCGGGCAACGAGGCAAGCTCCAGAGCAAAAAAA
TCTAGATATTAGAG
back to top