mRNA_Ecto-sp9_F_contig10.49.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig10.49.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7I0_ECTSI) HSP 1 Score: 3544 bits (9191), Expect = 0.000e+0 Identity = 1849/1988 (93.01%), Postives = 1892/1988 (95.17%), Query Frame = 1
Query: 283 EAINHDLALTATRLDGADKLLSKSPATSLRHPTAVATTTAGIDKAGEDGLASTWPTARPSSMRVDGQRALLSRTTPPHQKKVARPSAARLPGDQEPAARRMGSLENFLQRARTAMESQGMHSDTLREFLLPSSSPDPSQETSTNMVQSWEVFQVLTLDLGLQLSEGDKQLISARFGDGEDGGKVDPDALLAAIALDHPETGGNAFSTAATSTSTAIPPKTGGTTMLEHNPDPGHSHKRRLHRNEGGQAATSDVTTRSWPDGKADEDEPRVDAGVPTRKDRSVDDSKLPSGQVFGDPEGGDPTDQAPPAYEDLVMQSPRIEGKGPAGAVATIEEIALRAERKYSGDSLNDWDDIRTRGRSGNAARSNDGTRDKAAAXXXXXXXXXALREENAKLRSELEVFDLGFFEEVEDLKYSYASLRREADKLARKQGIPSLSKSLDLPEEGEEPWDRSVDMAHHSVDWAETAKNQRTAAGRGGSSPSSPPRGTHAARLARRWDLLSSGVAADVEEVGFPVGSPTRGHGGTIPGRVSVAPGGGRYRGGGIGGRGEAFSVTPHPQRGLIAAHERKLAWEISCGGMGSLARLRENTGRVGPATAVAAGDGFWSDEQVFLALRNSGYALELEDVAVLRTGLGSDAKGRVDLEEFVGMCEDIASVEEWYLPPGSAVAATVAGRANAGSPVKRSGGGG--AFASGSLPSGMLLREQGDEVLGERRAGGGDGFGPPEQNARGGGLPSSTNGVIPFPVSAGQVPHETLYLGGTVYGERTFLEPSKTVERVLAELKDQLSLLDIDHLIPARDHGARGTGSGEGAVTTLGKAVGARFSRRDPTQSGLLSAREVGLALEDVGVCLQADEVITLAKRFRPPVGGPQENRGNGSDRSRGREGYASDAATAIDLDGGGLDGVVAEYAPLVRLVVDSLAEASGVDPAVGGQVRLGQKKAKWNERMPAPAKRLRSALIAGKGRGGLERLRQRFRDFDIDGDGCLGRREFMRALNLALACETGDDSNPSPYFTVGGVLSEQEASELMGRLDRDRDGRVSSEGFVEYFADAVHGEEGGGRGGGHPESWFQLEVDIAEKLLQQMEAQGGSTARRAWVNSLRRRFQTADIHETGTLNRDEFFRCLRSMHVSLSASEGERLFLSLLPTTTDPMRGARYPELVNFLRGKNAKWYDVESDIADKILTAMGPDGPSRRAWLNRIRRRFMSLDAFRAGVLGASDLLQALKDGGCYLGLEEEARLLDALETEESASRFDTEGGVSYRELLLFCARHAGKWSEGQPLLAERLREALRSQAKTTADVRRLFRRLDDDGDGFINRKDFKIGLHSLGLGFVTRDEQEVLMDALDAEGSGRVRYADFASFFMDSDPWFKTDADLAERLCKTFEMSGDSGGDXXXXXXXXGSVLGRSRERFVAVDRDKTGFINRAQFRAVLASLPGTQDLAEDEVDRLSTLLDDQGDGRVSYRSLLDLLVRHLGDWHKRIPKVASELSLALQNTQYGLKACVENLSRRLNIADHKSTGRLPPSTFARCLRSVGLSLAPESLGEMLSVLDTYGDGLIPITPVLEFLRREAGISPEGGDVQQKAGGEVGVAFREAVRYLAEAEQQYANSEDESDGGGTGGYGHPAGDAATPRGVKNLNRSAEPGASTRSYDGTMGNRAFRDTARLRREKRGRASGGIREERGAWAIIPWSVCLRRVFDRRLDVDGDGFLTEGDLAACLPEIGVDVKGRDAARTLLSAMDSRQRGLGQATFKDFVEFMGTNGSSRRRGGRSPPRTAPYSPVDKRRTSLGPGQTRLLRHVRLALGLPAAAASHEDHEDDSRETITSKDLRLAMARLDPHGSGRLPLGKIKAALQGFGLRVGNVPHASWLDLTGSLDQDAYGHLFYSDFVDLLMPSEQPPYLSSPDPPLDRRRSNAYSRKHPIIPAETLAERGTRSGNRGRSIYGAFKGGENSDRPARRGAGDDWRSRTYPPSAVSSVAPASGKRPAIPSQYSRPSSTFTGT 6240
+AINHDLALTATRLDGADKLLSKSPATSLRHPTA+ATTTAGIDKAGEDGLA+TWPTARPSS+RVDGQRALLSRTTP HQKKVARPSAARLP D+EP ARRMGSLENFLQRARTAMESQGMHSDTLREFLLPSS+ DPSQETSTNMV+SWEVF+VLTLDLGLQLSE DKQLISARFGDGEDGGKVD DALLAAIALDHPETGGNA S AATS ST +PPKTGGT+ LEHN D HSHKRRLHRNEG AA S+VTTRSW G+ADEDE RVDAGVPTR+D+S+ DS+L SGQV G PEGGDPTDQAPPAYEDLVMQSPRIEGKGPAGAVATIEEIALRAERKYSGDSLNDWDD RTRGRSGNAA SNDGTRD+AAA AL+EENAKLRSELEVFDLGFFEEVEDLKYSYASLRREADKLARKQGIPSLSKSLDLPEEGEEPWDRSVDMAHH+VDWAETAKNQRTAAGRGGSSPSSPPRGTHAARLARRWDLLSSGVAADVEEVGFPVGSPTRGHGGTIPGRVS APGGGRYRGGGIGG+GEAF+VTPHPQRGLIAAHERKLAWEISCGGMGSLARLRENTGRVGPATAVAAGDGFWSDEQVFLALRNSGYALELEDVAVLRTGLGSDAKGRVD+EEFVGMCED+ASVEEWYLPP SAV A VAGRANA SP KRSG AF+SGSLP GMLLRE GDEVLGERRAGGGDGFG PEQNARGGGLPSSTNGVI FPVSAGQVPHETLYLGGTVYGERTFLEPSKTVE VLAELKDQLSLLDIDHLIPARDHGARGTGSGEGAVTTLGKAVGARFSRRDPTQSGLLSAREVGLALEDVGV LQADEVITLAK F+PPVGGPQENRGNGSD SRGREGYASDAATAIDLDGGGLDGVVAEYAPLVRLVVDSLAEASGVDPAVGG+VRLGQKKAKWNERMPAPAKRLRSAL AGKGRGGLERLRQRFRDFDIDGDGCLGRREFMRALNLALACETGDDS+PSPYFTVGGVLSEQEA+ELM RLDRDRDGRVS EGFV+YFADAVHGEEGGGRGGGHPESWFQLEVDIAEKLLQQMEAQGGSTARRAWVNSLRRRFQTADIHETGTLNRDEFFRCLRSMHVSLSA EGERLFLSLLPTTTDPMRGARYPELVNFLRGKNA WYDVESDIADKILTAMGPDGPSRRAWLNRIRRRFMSLDAFRAGVLGASDLLQALKDGGCYLGLEEEARLLDALETEESA RFDTEGGVSYRELLLFCARHAGKWSEGQPLLAERLREALRSQAKTTADVRRLFRRLDDDGDGFI+RKDFKIGLHSLGLGFVTRDEQEVLMDALDAEGSGRVRYADFASFFMDSDPWFKTDADLAERLCK+FEMSGDSGGDXXXXXXX GSVLGR RERFVAVDRDKTGFINRAQFRAVLASLPGTQDL EDEVDRLSTLLDDQGDGRVSYRSLLDLLVRHLGDWHKRIPKVASELSLALQNTQYGLKACVEN SRRLNIADHKSTGRLPPSTFARCLRSVGLSLAPESLGEM+SVLD YGD LIPITPVLEFLRREAGISPEGGDVQQ+AGGEVGVAFREAVR LAEAEQQYANSEDESDGGGTGGYGH DAATPRG NR AEP ASTRSYDGT N A RDTARLRREKRGR SGGIREERGAWAIIPWSVCLRRVFDR LDVDGDGFLTEGDLAACLPEIGV V GRDAARTLLSAMDSRQRGLGQATFKDFVEFMGTNGSSRRRGGRSPP TAPYSPVDKRRTSLGPGQTRLLRHVRLALGLPAAAASHEDHEDDSRETITSKDLR AMARLDPHGSGRLPLGKIKAALQGFGLRVGNVPHASWLDLTGSLDQDAYGHLFYSDFVDLLMPSEQ PYLSSPDPP DRR+SNA+SRK P+IPAE LAERGTRSGN GRS+YGAF+GGE++DRPAR+G GDDWRSRTYPP+AVSSVAPASGKRPA PSQYSRPS TG+
Sbjct: 38 QAINHDLALTATRLDGADKLLSKSPATSLRHPTALATTTAGIDKAGEDGLANTWPTARPSSIRVDGQRALLSRTTPSHQKKVARPSAARLPRDKEPGARRMGSLENFLQRARTAMESQGMHSDTLREFLLPSSAADPSQETSTNMVRSWEVFKVLTLDLGLQLSEVDKQLISARFGDGEDGGKVDADALLAAIALDHPETGGNAVSPAATSPSTTVPPKTGGTSTLEHNHDADHSHKRRLHRNEGVPAAASEVTTRSWAGGRADEDESRVDAGVPTRRDQSLHDSELSSGQVLGGPEGGDPTDQAPPAYEDLVMQSPRIEGKGPAGAVATIEEIALRAERKYSGDSLNDWDDSRTRGRSGNAAGSNDGTRDEAAAGAAAAREAAALQEENAKLRSELEVFDLGFFEEVEDLKYSYASLRREADKLARKQGIPSLSKSLDLPEEGEEPWDRSVDMAHHTVDWAETAKNQRTAAGRGGSSPSSPPRGTHAARLARRWDLLSSGVAADVEEVGFPVGSPTRGHGGTIPGRVSAAPGGGRYRGGGIGGKGEAFAVTPHPQRGLIAAHERKLAWEISCGGMGSLARLRENTGRVGPATAVAAGDGFWSDEQVFLALRNSGYALELEDVAVLRTGLGSDAKGRVDVEEFVGMCEDVASVEEWYLPPRSAVVAIVAGRANARSPAKRSGXXXXXAFSSGSLPFGMLLRELGDEVLGERRAGGGDGFGAPEQNARGGGLPSSTNGVISFPVSAGQVPHETLYLGGTVYGERTFLEPSKTVESVLAELKDQLSLLDIDHLIPARDHGARGTGSGEGAVTTLGKAVGARFSRRDPTQSGLLSAREVGLALEDVGVRLQADEVITLAKSFKPPVGGPQENRGNGSDLSRGREGYASDAATAIDLDGGGLDGVVAEYAPLVRLVVDSLAEASGVDPAVGGRVRLGQKKAKWNERMPAPAKRLRSALTAGKGRGGLERLRQRFRDFDIDGDGCLGRREFMRALNLALACETGDDSDPSPYFTVGGVLSEQEAAELMDRLDRDRDGRVSWEGFVKYFADAVHGEEGGGRGGGHPESWFQLEVDIAEKLLQQMEAQGGSTARRAWVNSLRRRFQTADIHETGTLNRDEFFRCLRSMHVSLSAREGERLFLSLLPTTTDPMRGARYPELVNFLRGKNAMWYDVESDIADKILTAMGPDGPSRRAWLNRIRRRFMSLDAFRAGVLGASDLLQALKDGGCYLGLEEEARLLDALETEESA-RFDTEGGVSYRELLLFCARHAGKWSEGQPLLAERLREALRSQAKTTADVRRLFRRLDDDGDGFIDRKDFKIGLHSLGLGFVTRDEQEVLMDALDAEGSGRVRYADFASFFMDSDPWFKTDADLAERLCKSFEMSGDSGGDXXXXXXXPGSVLGRFRERFVAVDRDKTGFINRAQFRAVLASLPGTQDLTEDEVDRLSTLLDDQGDGRVSYRSLLDLLVRHLGDWHKRIPKVASELSLALQNTQYGLKACVENFSRRLNIADHKSTGRLPPSTFARCLRSVGLSLAPESLGEMVSVLDAYGDELIPITPVLEFLRREAGISPEGGDVQQQAGGEVGVAFREAVRSLAEAEQQYANSEDESDGGGTGGYGHSDRDAATPRGAITFNRRAEPAASTRSYDGTTANWALRDTARLRREKRGRTSGGIREERGAWAIIPWSVCLRRVFDRWLDVDGDGFLTEGDLAACLPEIGVYVTGRDAARTLLSAMDSRQRGLGQATFKDFVEFMGTNGSSRRRGGRSPPGTAPYSPVDKRRTSLGPGQTRLLRHVRLALGLPAAAASHEDHEDDSRETITSKDLRRAMARLDPHGSGRLPLGKIKAALQGFGLRVGNVPHASWLDLTGSLDQDAYGHLFYSDFVDLLMPSEQSPYLSSPDPPSDRRKSNAHSRKQPMIPAEALAERGTRSGNLGRSVYGAFEGGESNDRPARKGVGDDWRSRTYPPAAVSSVAPASGKRPARPSQYSRPSLRSTGS 2024
BLAST of mRNA_Ecto-sp9_F_contig10.49.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNM1_9PHAE) HSP 1 Score: 1932 bits (5005), Expect = 0.000e+0 Identity = 1027/1173 (87.55%), Postives = 1060/1173 (90.37%), Query Frame = 1
Query: 283 EAINHDLALTATRLDGADKLLSKSPATSLRHPTAVATTTAGIDKAGEDGLASTWPTARPSSMRVDGQRALLSRTTPPHQKKVARPSAARLPGDQEPAARRMGSLENFLQRARTAMESQGMHSDTLREFLLPSSSPDPSQETSTNMVQSWEVFQVLTLDLGLQLSEGDKQLISARFGDGEDGGKVDPDALLAAIALDHPETGGNAFSTAATSTSTAIPPKTGGTTMLEHNPDPGHSHKRRLHRNEGGQAATSDVTTRSWPDGKADEDEPRVDAGVPTRKDRSVDDSKLPSGQVFGDPEGGDPTDQAPPAYEDLVMQSPRIEGKGPAGAVATIEEIALRAERKYSGDSLNDWDDIRTRGRSGNAARSNDGTRDKAAAXXXXXXXXXALREENAKLRSELEVFDLGFFEEVEDLKYSYASLRREADKLARKQGIPSLSKSLDLPEEGEEPWDRSVDMAHHSVDWAETAKNQRTAAGRGGSSPSSPPRGTHAARLARRWDLLSSGVAADVEEVGFPVGSPTRGHGGTIPGRVSVAPGGGRYRGGGIGGRGEAFSVTPHPQRGLIAAHERKLAWEISCGGMGSLARLRENTGRVGPATAVAAGDGFWSDEQVFLALRNSGYALELEDVAVLRTGLGSDAKGRVDLEEFVGMCEDIASVEEWYLPPGSAVAATVAGRANAGSPVKRSGGGGAFASGSLPSGMLLREQGDEVLGERRAGGGDGFGPPEQNARGGGLPSSTNGVIPFPVSAGQVPHETLYLGGTVYGERTFLEPSKTVERVLAELKDQLSLLDIDHLIPARDHGARGTGSGEGAVTTLGKAVGARFSRRDPTQSGLLSAREVGLALEDVGVCLQADEVITLAKRFRPPVGGPQENRGNGSDRSRGREGYASDAATAIDLDGGGLDGVVAEYAPLVRLVVDSLAEASGVDPAVGGQVRLGQKKAKWNERMPAPAKRLRSALIAGKGRGGLERLRQRFRDFDIDGDGCLGRREFMRALNLALACETGDDSNPSPYFTVGGVLSEQEASELMGRLDRDRDGRVSSEGFVEYFADAVHGEEGGGRGGGHPESWFQLEVDIAEKLLQQMEAQGGSTARRAWVNSLRRRFQTADIHETGTLNRDEFFRCLRSMHVSLSASEGERLFLSLLPTTTDPMRGARYPELVNFLRGKNAKWYDVESDIADKI 3801
+AIN DLALTATRLDGADKLLS+SPATSLRH T VATTTAGIDKAGE GLA+TWPTARPSSMR+DGQR LLSRTTPPHQKKVARPSAARLP D +GMHSDTLREFLLPSS +PS ETSTNMV+SWEVF+VLTLDLGLQLSEGDKQLISARFGDGEDGGKVDPDALLAAIALDHPETGGNA STAAT STA+PPKTGGT LEHN DPGHSHK RLHRNEG QAATSDVT RSW DGKA DE RVDAGVPTRKDRSVDDS+ PSG V GDPEGGDPTDQAPPAYEDLVMQSPRIEGKGPAGA ATIEEIALRAERKYSGDSLN+WDDIRTR RSGNAA SNDGTRDKAAAXXXX AL+EENAKLRSELEVFDLGFFEEVEDLKYSYASLRREADKLARKQGI SLSKSLDLPEEGEEPWDRSVDMAHHSVDWAETAKNQRTAAGRGG SP SPPRGTHAARLARRWDLLSSGVAADVEEVGFPVGSPTRGHGGTIPGRVSVAPG GRYRGGGIGGRGEAF+VTPHPQRGLIAAHERKLAWEISCGGMGSLARLRENTGRVGPA AVAA DGFWSDEQVFLALRNSGYALELEDVAVLRTGLG+DAKGRVDLEEF+GMCEDIASVEEWYLPPGSAVA FASGSLPSGMLLREQGDEVLGE +N+RGGGLPSSTNGV FPVSAGQVP ETLYLGGTVYGE++FLEP+KTVE VLAELKDQLSLLDIDHL PARDHGARGTGSGE AVTTLGKAVGARFSRRDPTQSGLLSAREVGLALEDVGVCLQADEVITLAKRF+PPVGGPQE+RG+G+DRSR REGYAS AAT +DLDGGGLDGVVAEYAPLVRLVVD+LAEASGVD AVGG+VRLGQKKAKWNERMPAPAKRLRSAL AG+GRGGLERLRQRF+DFDIDGDGCLGRREF+RALNLALACETGDDS+PSPYFTVGGVLSEQEASELMGRLDRDRDGRVS EGFVEYFADAVHGEEGGGRGGGHPESWFQLEVDIAEKLLQQ+EAQGG TARRAWVNSLRRRFQTADIHETGTLNRD FFRCLRSMHVSLSA EGERLFLSLLPTTTDP RGARYPELVNFLRGKNAKWYDVESDIADK+
Sbjct: 55 QAINRDLALTATRLDGADKLLSESPATSLRHLTTVATTTAGIDKAGEGGLANTWPTARPSSMRIDGQRTLLSRTTPPHQKKVARPSAARLPRD------------------------KGMHSDTLREFLLPSSVANPS-ETSTNMVRSWEVFKVLTLDLGLQLSEGDKQLISARFGDGEDGGKVDPDALLAAIALDHPETGGNAVSTAATPPSTAVPPKTGGTMTLEHNADPGHSHKCRLHRNEGAQAATSDVTKRSWADGKAGVDESRVDAGVPTRKDRSVDDSEQPSGHVLGDPEGGDPTDQAPPAYEDLVMQSPRIEGKGPAGAEATIEEIALRAERKYSGDSLNEWDDIRTRDRSGNAAGSNDGTRDKAAAXXXXREAA-ALQEENAKLRSELEVFDLGFFEEVEDLKYSYASLRREADKLARKQGILSLSKSLDLPEEGEEPWDRSVDMAHHSVDWAETAKNQRTAAGRGGGSPRSPPRGTHAARLARRWDLLSSGVAADVEEVGFPVGSPTRGHGGTIPGRVSVAPGEGRYRGGGIGGRGEAFAVTPHPQRGLIAAHERKLAWEISCGGMGSLARLRENTGRVGPAAAVAAEDGFWSDEQVFLALRNSGYALELEDVAVLRTGLGNDAKGRVDLEEFMGMCEDIASVEEWYLPPGSAVAXXXXXXXXXXXXXXXXXXXXXFASGSLPSGMLLREQGDEVLGEXXXXXXXXXXXXXRNSRGGGLPSSTNGVTSFPVSAGQVPLETLYLGGTVYGEKSFLEPTKTVESVLAELKDQLSLLDIDHLFPARDHGARGTGSGEVAVTTLGKAVGARFSRRDPTQSGLLSAREVGLALEDVGVCLQADEVITLAKRFKPPVGGPQESRGSGNDRSRRREGYASGAATVVDLDGGGLDGVVAEYAPLVRLVVDTLAEASGVDSAVGGRVRLGQKKAKWNERMPAPAKRLRSALTAGRGRGGLERLRQRFQDFDIDGDGCLGRREFVRALNLALACETGDDSDPSPYFTVGGVLSEQEASELMGRLDRDRDGRVSWEGFVEYFADAVHGEEGGGRGGGHPESWFQLEVDIAEKLLQQLEAQGGCTARRAWVNSLRRRFQTADIHETGTLNRDAFFRCLRSMHVSLSAREGERLFLSLLPTTTDPTRGARYPELVNFLRGKNAKWYDVESDIADKV 1201
BLAST of mRNA_Ecto-sp9_F_contig10.49.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP00_9PHAE) HSP 1 Score: 1067 bits (2759), Expect = 0.000e+0 Identity = 562/636 (88.36%), Postives = 576/636 (90.57%), Query Frame = 1
Query: 4381 RLCKTFEMSGDSGGDXXXXXXXXGSVLGRSRERFVAVDRDKTGFINRAQFRAVLASLPGTQDLAEDEVDRLSTLLDDQGDGRVSYRSLLDLLVRHLGDWHKRIPKVASELSLALQNTQYGLKACVENLSRRLNIADHKSTGRLPPSTFAR-----------CLRSVGLSLAPESLGEMLSVLDTYGDGLIPITPVLEFLRREAGISPEGGDVQQKAGGEVGVAFREAVRYLAEAEQQYANSEDESDGGGTGGYGHPAGDAATPRGVKNLNRSAEPGASTRSYDGTMGNRAFRDTARLRREKRGRASGGIREERGAWAIIPWSVCLRRVFDRRLDVDGDGFLTEGDLAACLPEIGVDVKGRDAARTLLSAMDSRQRGLGQATFKDFVEFMGTNGSSRRRGGRSPPRTAPYSPVDKRRTSLGPGQTRLLRHVRLALGLPAAAASHEDHEDDSRETITSKDLRLAMARLDPHGSGRLPLGKIKAALQGFGLRVGNVPHASWLDLTGSLDQDAYGHLFYSDFVDLLMPSEQPPYLSSPDPPLDRRRSNAYSRKHPIIPAETLAERGTRSGNRGRSIYGAFKGGENSDRPARRGAGDDWRSRTYPPSAVSSVAPASGKRPAIPSQYSRPSSTFTGTVGCGK 6255
RLCK+FE+SGDSG DXXXXX GSVL R RERFVA DRDKTGFINRAQFRAVLASLPGTQDL EDEVDRLSTLLDDQGDGRVSYRSLLDLLVRHLGDWHKRIPKVASELSLALQNTQYGLKACVENLSRRLNIADHKSTGRLPPSTF R CLRSVGLSLAPESLGEM+SVLD YGDGLIPITPVLEFLRREAGISPEGGD+QQ+AGGEVG AFREAVR LA+AEQQYANSEDESDGGGTGGYGHP DAATPRG NR AEPGAS RSYDG NRA DTARLRREKRGR SGGIREERGAWAIIPWSVCLRRVFDRRLDVDGDGFLTEGDLAACLPEIGV V GRDAARTLLSAMD RQRGLGQATFKDFVEF+GTNGSSRRRGGRSPP TAPYSPVDK RTSLGPGQT LLR VRLALGLPAAAASH+DHED S+ETITSKDLRLAMARLDPHGSGRLPL KIKAALQ FGLRV NVPHASWLDLTGSLDQDAYGHLFYSDFVDLLMPSEQ PYLSSPDPPLDRRRSNA+ K IIPAETLAERGT SGNRGRSIYGAF+GGE+S RPAR+GAG+DWRSRTYPPSAVSSVAPASGKRPA PSQ SRPSS TGTVG GK
Sbjct: 25 RLCKSFEISGDSGDDXXXXXDGPGSVLWRFRERFVAADRDKTGFINRAQFRAVLASLPGTQDLTEDEVDRLSTLLDDQGDGRVSYRSLLDLLVRHLGDWHKRIPKVASELSLALQNTQYGLKACVENLSRRLNIADHKSTGRLPPSTFTRYGLELSSSGKRCLRSVGLSLAPESLGEMVSVLDAYGDGLIPITPVLEFLRREAGISPEGGDMQQQAGGEVGFAFREAVRSLAKAEQQYANSEDESDGGGTGGYGHPDRDAATPRGATTFNRIAEPGASARSYDGKTANRALLDTARLRREKRGRTSGGIREERGAWAIIPWSVCLRRVFDRRLDVDGDGFLTEGDLAACLPEIGVHVTGRDAARTLLSAMDFRQRGLGQATFKDFVEFVGTNGSSRRRGGRSPPLTAPYSPVDKNRTSLGPGQTSLLRRVRLALGLPAAAASHQDHEDGSQETITSKDLRLAMARLDPHGSGRLPLWKIKAALQAFGLRVRNVPHASWLDLTGSLDQDAYGHLFYSDFVDLLMPSEQSPYLSSPDPPLDRRRSNAHPGKQSIIPAETLAERGTGSGNRGRSIYGAFEGGESSGRPARKGAGEDWRSRTYPPSAVSSVAPASGKRPARPSQNSRPSSRSTGTVGGGK 660
BLAST of mRNA_Ecto-sp9_F_contig10.49.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SKA7_9STRA) HSP 1 Score: 136 bits (342), Expect = 2.360e-28 Identity = 140/547 (25.59%), Postives = 224/547 (40.95%), Query Frame = 1
Query: 3463 WFQLEVDIAEKLLQQMEAQGGSTARRAWVNSLRRRFQTADIHETGTLNRDEFFRCLRSMHVSLSASEGERLFLSLLPTTTDPMRGARYPELVNFLRGKNAKWYDVESDIADKILTAMGPDGPSRRAWLNRIRRRFMSLDAFRAGVLGASDLLQALKDGGCYLGLEEEARLLDALETEESASRFDTEGG----VSYRELLLFCARHAGK----WSEGQPLLAE-------RLR----EALR-------------------SQAKTTADVRRLFRRLDDDGDGFINRKDFKIGLHSL-GLGFVTRDEQEVLMDAL-DAEGSGR-VRYADFASFFMDSDPWFKTDADLAERLCKTFEMSGDSGG---DXXXXXXXXGSVLGRSRERFVAVDRDKTGFINRAQFRAVLAS---LPGTQDLAEDEVDRLSTLLDDQGDGRVSYRSLLDLLVRHLGDWHKRIPKVASELSLALQNTQYGLK-ACVENLSRRLNIADHKSTGRLPPSTFARCLRSVGLSLAPESLGEMLSVLDTYGDGLIPITPVLEFLRREAG 4959
W++ IA +L + + G+T +V+ LR R + ++G + + L + V LS+ E + L +L D +Y ++++FL + +W D +A KI+ AMG R WL+ +RRRF D F+ G + A +L+ L+ G +LG +E ARLLDALE E E G + Y L+ FCA HA K W++ + AE RLR AL+ +Q A R+ F + D ++ + F G+ + G + EQE + L A GR Y F F ++ ++ +D R K + D G ++ R F D G + F +L S + ++D +++ RL++ LD+ GDGR++Y LL ++ H R + + L + A ++ L L+ D +GR+ R L LS+ P E LD GDG I L + R G
Sbjct: 283 WWEQVESIARRLATAAQGRQGNT----FVDDLRHRLLRFEDKKSGFIAMGDLADSLDQVGVPLSSREADMLGDAL---GVDRAGLVQYEQVLDFLTREERRWMDKVRAVAVKIIKAMGRTAAERHQWLSSLRRRFHGFDRFKDGFIAAKELIAVLRSHGVHLGDDEAARLLDALEDENRLPGVPREDGAAGQIRYSALVDFCASHASKTVDVWADDEDEDAEDDVPRRPRLRVNEGSALQGGSGGEHTVEEFQRILWRETQGGKIAVTRQRFEKWFGDRHNRVSAQKFAKGVKQIPGAESLKGSEQEEIFQKLCGANDLGRGFDYPSFLKFLHEAGRKRRSSSDQRPRSRKLADRDEDIANRLAKFLRGHSAPGRLVETLRSAFERADSRNEGKLGLRAFERLLESTGFMSQSRDWGREDIARLASALDEDGDGRIAYGELLKFMLHHAEKRKGRALQTLHGIHQQLHRLPLEQREATLQRLGDMLDSVDSNRSGRVLARDLQRILELNHLSMTPAQAKECAEELDGAGDGKIAWATFLNEIERMGG 822
BLAST of mRNA_Ecto-sp9_F_contig10.49.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCN6_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 1.040e-5 Identity = 42/136 (30.88%), Postives = 61/136 (44.85%), Query Frame = 1
Query: 1906 IGGRGEAFSVTPHPQRG---------LIAAHERKLAWEISCGGMGSLARLRE------------NTGRVGPATAVAAGDGFWSDEQVFLALRNSGYALELEDVAVLRTGLGSDAKGRVDLEEFVGMCEDIASVEEW 2250
+G G A + P RG HER+LAWE++ GG +L L+E A GF + Q+ +AL +GY L+ +++ LR GLG DA GR D E + M D+A+ + W
Sbjct: 560 VGDAGTADATPPSALRGGXXXXXXXXXXXQHERRLAWEVANGGAEALDALKEWIEYFEXXXXXXXXXXXXXXXXXXAPSGFLTGAQLRMALTGAGYQLDDDEIEALRAGLGMDAAGRTDGRELLQMAHDMAAAQGW 695 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10.49.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig10.49.1 >prot_Ecto-sp9_F_contig10.49.1 ID=prot_Ecto-sp9_F_contig10.49.1|Name=mRNA_Ecto-sp9_F_contig10.49.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=2088bp MRLGSPARKPGNATLPHSTDAGSGTSNRWARTQRPRGVGKSDSNSSRNSSback to top mRNA from alignment at Ecto-sp9_F_contig10:171..16786- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig10.49.1 ID=mRNA_Ecto-sp9_F_contig10.49.1|Name=mRNA_Ecto-sp9_F_contig10.49.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=16616bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10:171..16786- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig10:171..16786- >mRNA_Ecto-sp9_F_contig10.49.1 ID=mRNA_Ecto-sp9_F_contig10.49.1|Name=mRNA_Ecto-sp9_F_contig10.49.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=12528bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10:171..16786- (Ectocarpus species9 EcSCA_722f female)back to top |