mRNA_Ecto-sp9_F_contig1.12.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig1.12.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5I560_OSTTA) HSP 1 Score: 436 bits (1121), Expect = 4.660e-154 Identity = 209/228 (91.67%), Postives = 217/228 (95.18%), Query Frame = 1
Query: 1 MDIGSINALMKSDEPLLPELEPYAFFDPNLKMRIFHHPLIIDVPFTSAALINARYKFKKQKLEEYLASGDYSGAIALTERPYRLDRFMDFMDGIAGTEEFCKLAADVWIDSENIHRNLDEWREVWSMVAPSNREWLHEEREWEAFQTLPDRTEVYRGIGVEGAENGLSWTTDVDKARWFADRNTNLAGVDIDAEPILLTGTVNKSDVIAYFLQRGESEVVVFPENVML 684
MDIGSINALMKSDEPLLPELEPYAFFDPNLKMRIFHHPLIIDVPFTSAALINARYKFKKQKLEEYLASGDYSGAIALTERPYRLDRFMDFMD +AGTEEFCKLAADVWIDSENIHRNLDEWREVWSMV SNREWLH+++EWEAFQ+LP+ E+YRGIGVEGA GLSWTTDVDKARWFADRN NLAGVDIDAEPILLTGTVNKSDVIAYFLQRGESE+VV PE V L
Sbjct: 1 MDIGSINALMKSDEPLLPELEPYAFFDPNLKMRIFHHPLIIDVPFTSAALINARYKFKKQKLEEYLASGDYSGAIALTERPYRLDRFMDFMDDVAGTEEFCKLAADVWIDSENIHRNLDEWREVWSMVGSSNREWLHDDQEWEAFQSLPEHFEIYRGIGVEGAVRGLSWTTDVDKARWFADRNANLAGVDIDAEPILLTGTVNKSDVIAYFLQRGESEIVVLPEKVEL 228
BLAST of mRNA_Ecto-sp9_F_contig1.12.1 vs.
Match: Uncharacterized (protein n=13 Tax=Bronvirus TaxID=1623278 RepID=A0A482JD40_9CAUD) HSP 1 Score: 145 bits (365), Expect = 2.730e-39 Identity = 86/218 (39.45%), Postives = 127/218 (58.26%), Query Frame = 1
Query: 40 EPLLPELEPYAF----FDPNLKMRIFHHPLIIDVPFTSAALINARYKFKKQKLEEYLASGDYSGAIALTERPYRLDRFMDFMDGIAGTEEFCKLAADVWIDSENIHRNLDEWREVWSMVAPSNREWLHEEREWEAFQTLPDRTEVYRGIGVEGAENGLSWTTDVDKARWFADR-NTNLAGVDIDAEPILLTGTVNKSDVIAYFLQRGESEVVVFPENV 678
EPL P+L Y F F P +K + P+ + A +NA Y++KK E LA+ + A+ L ERP+RL+ F+D + + +E+ +L + +W DSENI +N DEWRE + ++R + + E +A LPD VYRG + AE+G+SWT D D+A+WFA+R NT + +A P + G V K +IAY RGESE++VFPE+V
Sbjct: 24 EPLHPDLLEYRFETDFFGPWVKHPFVYSPIFGE---REHARLNALYEYKKTAYLEALAAKKWHTAVFLHERPWRLNAFLDIAEHL-DDQEYWQLLSTIWTDSENIWQNRDEWREAFE-ADRADRHLIMSDEERDALAALPDTIPVYRGYQHDTAEDGMSWTVDEDRAKWFANRWNTP----ESEAWPRIAQGQVGKDKIIAYITSRGESEIIVFPEDV 232
BLAST of mRNA_Ecto-sp9_F_contig1.12.1 vs.
Match: Uncharacterized (protein n=4 Tax=Bronvirus TaxID=1623278 RepID=G1BQP1_9CAUD) HSP 1 Score: 142 bits (357), Expect = 4.530e-38 Identity = 90/216 (41.67%), Postives = 121/216 (56.02%), Query Frame = 1
Query: 40 EPLLPELEPYAFFDPNLKMRIFHHPLIIDVPFTSA--ALINARYKFKKQKLEEYLASGDYSGAIALTERPYRLDRFMDFMDGIAGTEEFCKLAADVWIDSENIHRNLDEWREVWSMVAPSNREWLHEEREWEAFQTLPDRTEVYRGIGVEGAENGLSWTTDVDKARWFADRNTNLAGVDIDAE-PILLTGTVNKSDVIAYFLQRGESEVVVFPENV 678
EP+ P L Y D + + I HPL+ F A INA Y+ K++ L E +A ++ A+ L ERPYRL+ F F D + +E+ +L +VW DSENI +N D WRE + P +R L ++ E A LPD VYRG + E G+SWT D +KA+WFA R +D D E P + TG V+K VIAYF R E E+VV PE+V
Sbjct: 27 EPIHPHLAEYTV-DTEIGVMI-KHPLVYAYMFHEREHARINATYEAKRRALGEAIAGRKWNNAVFLYERPYRLNAFNIFQDQLED-QEYWQLLGNVWTDSENIWQNRDTWREALTANRP-DRHMLMDKEEQAALALLPDVLTVYRGFMYDDGEEGMSWTLDQEKAKWFARR----FHIDPDCERPRIATGHVSKEKVIAYFTGRNEDEIVVLPEDV 234
BLAST of mRNA_Ecto-sp9_F_contig1.12.1 vs.
Match: Uncharacterized (protein n=1 Tax=Mycobacterium phage Archie TaxID=1718599 RepID=A0A0M4R280_9CAUD) HSP 1 Score: 137 bits (346), Expect = 1.780e-36 Identity = 82/216 (37.96%), Postives = 112/216 (51.85%), Query Frame = 1
Query: 40 EPLLPELEPYAFFDPNLKMRIFHHPLIIDVPFTSA--ALINARYKFKKQKLEEYLASGDYSGAIALTERPYRLDRFMDFMDGIAGTEEFCKLAADVWIDSENIHRNLDEWRE-VWSMVAPSNREWLHEEREWEAFQTLPDRTEVYRGIGVEGAENGLSWTTDVDKARWFADRNTNLAGVDIDAEPILLTGTVNKSDVIAYFLQRGESEVVVFPENV 678
EPL P+L Y + L + + HPL+ ++ T A NA Y K++ L + L+ G+++ + L ERPYRLD F D + + + L +W DSENI N WR + ++RE L + LP EVYRG +G GLSWT ++ KARWFA R + + TGTV+ SDVIAYF R E E+VV PENV
Sbjct: 22 EPLHPDLAEYLHNEGPLGVPMLKHPLVFNMLHTERENARANACYAAKREALSKALSDGNWTSYVFLHERPYRLDAFSIIRDRLTNNDAYWPLLGLIWTDSENIWENRGAWRRRLTDPKRVADRETLMSNSDHNTLCGLPSSFEVYRGFNDDGDAEGLSWTLNIAKARWFATRFSQTGAT-------VATGTVDHSDVIAYFSGRNEDEIVVLPENV 230
BLAST of mRNA_Ecto-sp9_F_contig1.12.1 vs.
Match: Uncharacterized (protein n=21 Tax=Bronvirus TaxID=1623278 RepID=S5YNW7_9CAUD) HSP 1 Score: 135 bits (340), Expect = 1.400e-35 Identity = 80/216 (37.04%), Postives = 110/216 (50.93%), Query Frame = 1
Query: 40 EPLLPELEPYAFFDPNLKMRIFHHPLIIDVPFTSA--ALINARYKFKKQKLEEYLASGDYSGAIALTERPYRLDRFMDFMDGIAGTEEFCKLAADVWIDSENIHRNLDEW-REVWSMVAPSNREWLHEEREWEAFQTLPDRTEVYRGIGVEGAENGLSWTTDVDKARWFADRNTNLAGVDIDAEPILLTGTVNKSDVIAYFLQRGESEVVVFPENV 678
EPL P+L Y D L + HPL+ ++ T A +NA Y+ K+ L + +++ + L ERPYRLD F D I + + L +W DSENI N W R + ++R+ L ++ + LP +VYRG +G GLSWT + KARWFA R + TGTV++ DVIAYF RGE E+VV PENV
Sbjct: 22 EPLHPDLAGYLHMDGPLGAPMLKHPLVFNMFHTERENARVNACYEGKRDALHKAFRECNWTSYVFLHERPYRLDAFSIIRDRITSNDAYWPLLGLIWTDSENIWENRGAWYRRLTEPRRIADRQTLMSVSDYNTLRDLPSSFKVYRGFNDDGDAEGLSWTLNAAKARWFATRYDQTGAT-------VATGTVDRDDVIAYFSSRGEDEIVVLPENV 230
BLAST of mRNA_Ecto-sp9_F_contig1.12.1 vs.
Match: Uncharacterized (protein n=1 Tax=Freshwater phage uvFW-CGR-AMD-COM-C203 TaxID=1838151 RepID=A0A1C7A9N9_9CAUD) HSP 1 Score: 133 bits (335), Expect = 5.830e-35 Identity = 79/212 (37.26%), Postives = 117/212 (55.19%), Query Frame = 1
Query: 25 LMKSDEPLLPELEPYAFFDPNLKMRIFHHPLIIDVPFTSAALINARYKFKKQKLEEYLASGDYSGAIALTERPYRLDRFMDFMDGIAGTEEFCKLAADVWIDSENIHRNLDEWREVWSMVAPSNREWLHEEREWEAFQTLPDRTEVYRGIGVEGAENGLSWTTDVDKARWFADRNTNLAGVDIDAEPILLTGTVNKSDVIAYFLQRGESEVV 660
+M S E L P+L PY + + HPL+ NA Y K +++ L + Y + L ERPYR++ F + ++ T + KL AD+W D+EN +N +EW+++ S S+R +L E E+ Q+LP+ +YRG ENGLSWT D A+WF++R ++ D EPI+L TV+KSD+IA F RGESEV+
Sbjct: 21 VMASTEELHPDLVPYV--SDGILGKQLRHPLVYQFGMIGNGWANAYYLQKIGDVKKALENKKYDSYVWLHERPYRIEAFQEIEHLLSDTA-YWKLVADIWTDTENQWQNYEEWKQLLSSKR-SSRHYLMNEEEFNLLQSLPENVVIYRGCQKGINENGLSWTLDKSIAQWFSNR------LERDGEPIVLERTVSKSDIIAVFTGRGESEVI 222
BLAST of mRNA_Ecto-sp9_F_contig1.12.1 vs.
Match: Uncharacterized (protein n=1 Tax=uncultured Caudovirales phage TaxID=2100421 RepID=A0A6J5R7T2_9CAUD) HSP 1 Score: 133 bits (335), Expect = 1.540e-34 Identity = 80/217 (36.87%), Postives = 122/217 (56.22%), Query Frame = 1
Query: 40 EPLLPELEPYAFFDPNLKMRIFHHPLIIDVPFTSA--ALINARYKFKKQKLEEYLASGDYSGAIALTERPYRLDRFMDFMDGIAGTEEFCKLAADVWIDSENIHRNLDEWREVWSMVAPSNREWLHEEREWEAFQTLPDRTEVYRGIGVEGAENGLSWTTDVDKARWFADRNTNLAGVDIDAEPILLTGTVNKSDVIAYFLQRGESEVVVFPENVML 684
EPL P L+PY +D + HPL+ + A +N +Y+ K++ +E +A D++ + L ERPYR+D FM+ + + +E + L + +W+DSENI N EW E+ + RE + +E E +A LPD ++Y+G + ++G SWTTD KA WFA R ++L G AE L VNK+DV AY L RGESE++ P + +
Sbjct: 40 EPLHPHLQPY-LYDDEYFGSMLKHPLVFSLIHAPAHNKAVNLQYEQKQKATKEAVARYDWNTYVFLHERPYRVDAFMEIENRLTNSE-YWSLFSSIWMDSENIRENPREW-EILLNSNRTFRECMMDEEEQQALAELPDVIDIYQGH-TDIRDDGWSWTTDRAKAEWFAGRFSSLEG----AEAFLTIAKVNKADVYAYLLSRGESEIIANPATITM 248
BLAST of mRNA_Ecto-sp9_F_contig1.12.1 vs.
Match: ADP-ribosyltransferase (n=8 Tax=unclassified Bronvirus TaxID=2201166 RepID=A0A7M1CS37_9CAUD) HSP 1 Score: 129 bits (325), Expect = 2.460e-33 Identity = 87/232 (37.50%), Postives = 125/232 (53.88%), Query Frame = 1
Query: 7 IGSINALMKSD-EPLLPELEPY----AFFDPNLKMRIFHHPLIIDVPFTSA--ALINARYKFKKQKLEEYLASGDYSGAIALTERPYRLDRFMDFMDGIAGTEEFCKLAADVWIDSENIHRNLDEWREVWSMVAPSNREWLHEEREWEAFQTLPDRT-EVYRGIGVEGAENGLSWTTDVDKARWFADRNTNLAGVDIDAEPILLTGTVNKSDVIAYFLQRGESEVVVFPENV 678
I SI L+ + EPL P+L+ + F P LK HPL+ + A +NA Y++K++ L + + + ++ A+ L ERPYRLD F + EE+ L +W DSENI+ N EW ++ + P +R + + E E LP+ VYRG EG E+GLSWT +ARWFA R N D P +++GTVN+ VIA+F R E E+VV PE+V
Sbjct: 10 IESIMELLNAPVEPLHPDLQRHMVDTGVFGPMLK-----HPLVFAMFMHEKEHARLNAHYEYKRRALADAIKARKWNTAVFLHERPYRLDAFAAIAHNMTD-EEYWSLLGRIWTDSENIYENRWEWEDLLTCERP-DRHHIMSDEEQELLAMLPETDIPVYRGYREEGGEDGLSWTLFKARARWFAKRFHNEGD---DTCPRIVSGTVNRDQVIAHFTNRDEMEIVVLPEHV 231
BLAST of mRNA_Ecto-sp9_F_contig1.12.1 vs.
Match: Uncharacterized (protein n=1 Tax=Mycobacterium phage DrLupo TaxID=2499037 RepID=A0A3S9UQP3_9CAUD) HSP 1 Score: 128 bits (321), Expect = 1.510e-32 Identity = 85/220 (38.64%), Postives = 121/220 (55.00%), Query Frame = 1
Query: 40 EPLLPELEPYAFFDPNLKMRIFHHPLIIDVPFTSAA--LINARYKFKKQKLEEYLASGDYSGAIALTERPYRLDRF---MDFMDGIAGTEEFCKLAADVWIDSENIHRNLDEWREVWSMVAPSNREWLHEEREWEAFQTLPDR--TEVYRGIGVEGAENGLSWTTDVDKARWFADRNTNLAGVDIDAEPILLTGTVNKSDVIAYFLQRGESEVVVFPENV 678
EPL EL+ + +D L + + HPL+ +P+ + NA K+K++ LE+Y++S D+S I ERPYR+D M+ + G E + L W DSENI +N +WR+++ +RE+ + + LPD VYRG V+G E G+SWTTD +A+WFA R N G A + + GTV K D I Y +R ESEVVVFPE V
Sbjct: 35 EPLDAELKEH-LYDSFLGIAL-KHPLVFGIPYFAQENPRYNACLKWKRECLEKYMSSRDFSQVIHAFERPYRIDAIGYVMEHCGDVTGIEMWTMLRV-AWTDSENIWQNEQQWRDLFEEWYDDSREFFMTSESAQEWAMLPDDQPVPVYRGFSVDGREQGMSWTTDKIRAKWFARRFAN-DGHGRGAARLAI-GTVMKCDCIGYVNERTESEVVVFPEKV 249
BLAST of mRNA_Ecto-sp9_F_contig1.12.1 vs.
Match: Uncharacterized (protein n=1 Tax=Oxalobacteraceae bacterium TaxID=1871070 RepID=A0A4Q3K9D8_9BURK) HSP 1 Score: 126 bits (316), Expect = 1.770e-32 Identity = 75/197 (38.07%), Postives = 102/197 (51.78%), Query Frame = 1
Query: 106 HHPLIIDV---PFTSAALINARYKFKKQKLEEYLASGDYSGAIALTERPYRLDRFMDFMDG---IAGTEEFCKLAADVWIDSENIHRNLDEWREVWSMVAPSNREWLHEEREWEAFQTLPDRTEVYRGIGVEGAENGLSWTTDVDKARWFADRNTNLAGVDIDAEPILLTGTVNKSDVIAYFLQRGESEVVVFPENV 678
HHPL+I A IN Y+ K+ L G + + L ERPYRL+ MD + E+F ++ + VW DSENI N + WR++ + P NR + E L D V+RG EG +GLSWTT+ +KA WFADR D EPI++ G V++ DVIAY + R E EV+ PE+V
Sbjct: 6 HHPLVISTLTFGIDRAHTINGLYEQKRATLARAREVGSFHRIVFLHERPYRLNALMDLIANDPRFTAHEDFWEIISQVWTDSENIWENDEGWRDILTRDIP-NRHRMMTREEQGRLDFLGDTIRVFRGYSGEGTPDGLSWTTNREKAEWFADRFG-------DGEPIVVEGEVDRRDVIAYLMGRNECEVIALPEHV 194 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1.12.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig1.12.1 >prot_Ecto-sp9_F_contig1.12.1 ID=prot_Ecto-sp9_F_contig1.12.1|Name=mRNA_Ecto-sp9_F_contig1.12.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=238bp MDIGSINALMKSDEPLLPELEPYAFFDPNLKMRIFHHPLIIDVPFTSAALback to top mRNA from alignment at Ecto-sp9_F_contig1:67196..67909+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig1.12.1 ID=mRNA_Ecto-sp9_F_contig1.12.1|Name=mRNA_Ecto-sp9_F_contig1.12.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=714bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1:67196..67909+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1:67196..67909+ >mRNA_Ecto-sp9_F_contig1.12.1 ID=mRNA_Ecto-sp9_F_contig1.12.1|Name=mRNA_Ecto-sp9_F_contig1.12.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1428bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1:67196..67909+ (Ectocarpus species9 EcSCA_722f female)back to top |