mRNA_Ecto-sp8_S_contig1030.494.1 (mRNA) Ectocarpus species8 EcLAC_412
|
Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig1030.494.1 vs. uniprot
Match: D7G0B1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0B1_ECTSI) HSP 1 Score: 674 bits (1740), Expect = 2.060e-240 Identity = 341/356 (95.79%), Postives = 347/356 (97.47%), Query Frame = 1
Query: 322 MSEEGSGAEDDDVERVALKLPEIANPFKKAFDAGQNLRSTLADTLGQITGTASPLEGVKIRSLEEYEKRLYSPFDSEEEVPTVLVVGATGEMGRVVVRKLLLRGFSVRVLVRNLYSSTLDLLGTGATFAQGDLTNYRSIVDAVSGVDKVIFCAQARDPEQAELVEFEGLRNLLAAFQDQRVALYGDPYSTKKTLFRFNREADRELWAVDQDSQQSAMWKSNKFGYGTFGSTRMYESGYATVESQLIKLNLSGFSGLAIRCCGDGKPYRFILRDRQYEETGIQFEMVIQASRWTKPNKWQTHRLPFSSFDAYLNGQVVQAEAGMEVDRASVQQLAIGYKREPVDPFNFILSMHFVKV 1389
MSEEGSGAE+DDVER+ LKLPEIANPFKKAFDAGQNLRSTLADTLGQITGTASPLEGVKIRSLEEYEKRLYSPFDSEEEVPTVLVVGATGEMGRVVVRKLLLRGFSVRVLVRNLYSSTLDLLGTGATFAQGDLTNYRSIVDAVSGVDKVIFCAQARDPEQAELVEFEGLRNLLAAFQDQRVALYGDPYSTKKTLFRFNREADRELWAVDQDSQQSAMWKSNKFGYGTFGSTRMYESGYATVESQ IKLNLSGFSGLA+RCCGDGKPYRFILRD+QYEE GIQFE VIQ TKPNKWQTHRLPFS+FDAYL GQVVQAEAGMEVDRASVQQLAIGYKREPVDPFNFILS+HFVKV
Sbjct: 1 MSEEGSGAEEDDVERIGLKLPEIANPFKKAFDAGQNLRSTLADTLGQITGTASPLEGVKIRSLEEYEKRLYSPFDSEEEVPTVLVVGATGEMGRVVVRKLLLRGFSVRVLVRNLYSSTLDLLGTGATFAQGDLTNYRSIVDAVSGVDKVIFCAQARDPEQAELVEFEGLRNLLAAFQDQRVALYGDPYSTKKTLFRFNREADRELWAVDQDSQQSAMWKSNKFGYGTFGSTRMYESGYATVESQQIKLNLSGFSGLAVRCCGDGKPYRFILRDKQYEENGIQFETVIQ----TKPNKWQTHRLPFSAFDAYLYGQVVQAEAGMEVDRASVQQLAIGYKREPVDPFNFILSLHFVKV 352
BLAST of mRNA_Ecto-sp8_S_contig1030.494.1 vs. uniprot
Match: A0A835ZGW1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGW1_9STRA) HSP 1 Score: 352 bits (903), Expect = 5.940e-109 Identity = 195/387 (50.39%), Postives = 250/387 (64.60%), Query Frame = 1
Query: 298 WRRFGSGSMSEEGSGAEDDDVERVALKLPEIANPFKKAFDAGQNLRSTLADTLGQITGTASPLEGVKIRSLEEYEKRLYSPFDSEEEVPTVLVVGATGEMGRVVVRKLLLRGFSVRVLVRNLYSSTLDLLGTGATFAQGDLTNYRSIVDAVSGVDKVIFCAQARDPEQAELVEFEGLRNLLAAFQDQRVALYGDPY-----------------------STKKTLFRFNREADRELWAVDQDSQQSAMWKSNKFGYGTFGSTRMYESGYATVESQLIKLNLSGFSGLAIRCCGDGKPYRFILRDRQYEETGIQFEMVIQASRWTKPNKWQTHRLPFSSFDAYLNGQVVQAEAGMEVDRASVQQLAIGYKREPVDPFNFILSMHFVKV 1389
+R S + E+ + A D ++ L +P NPF F+AG++LR TL + L Q TG + V E E+RLYS FDS EEVP VLVVGATGE GRVVVRKLLLRGF VRVLVRNLYSSTLDLLGTG T+ QGDL N SIVDAVSGVDKV+F AQ+RD + A+ VEF G +NL++ FQD RVA YG + STK+TLF+F+R DRELW++ +++ + W NKF +GT G + E G +VES + LN+ FSGL +R GDGK YR ILR + YE G+QFE V+Q TKPNKWQTHRLPFS+F+A++ G ++ + +DR V+Q+A+ Y+R P D FI+S+ F+KV
Sbjct: 369 YRASTSVTQEEKEAAAAGADKKKGGLSIP---NPFLDTFNAGRSLRETLDEALDQFTGGKTSKARVGFADAEALERRLYSQFDSPEEVPEVLVVGATGETGRVVVRKLLLRGFKVRVLVRNLYSSTLDLLGTGVTYTQGDLGNAASIVDAVSGVDKVMFLAQSRD-DSAQDVEFAGFKNLISTFQDSRVADYGTAFILTYPXXXXXXXXXXXXXXXXXXSTKRTLFKFSRPMDRELWSLGKEAAR-LKWAPNKFDHGTLGGVGVQELGDLSVESPKLDLNMGAFSGLVVRLLGDGKQYRIILRTKLYEMNGVQFESVVQ----TKPNKWQTHRLPFSTFEAHVGGTNIEGAQQVRLDRRDVKQIAVAYRRAPSDDGTFIVSLDFIKV 746
BLAST of mRNA_Ecto-sp8_S_contig1030.494.1 vs. uniprot
Match: A0A2V3J7E6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J7E6_9FLOR) HSP 1 Score: 208 bits (530), Expect = 2.630e-58 Identity = 118/295 (40.00%), Postives = 174/295 (58.98%), Query Frame = 1
Query: 541 FDSEEEVPTVLVVGATGEMGRVVVRKLLLRGFSVRVLVRNLYSSTLDLLGTGATFAQGDLTNYRSIVDAVSGVDKVIFCAQARDPEQAELVEFEGLRNLLAAFQDQRVALYGDPYSTKKTLFRFNREADRELWAVDQDSQQSAMWKSNKFGYGTFGSTRM------YE--SGYATVESQLIKLNLSGFSGLAIRCCGDGKPYRFILRDRQYEETGIQFEMVIQASRWTKPNKWQTHRLPFSSFDAYLNGQVVQAEAGMEVDRASVQQLAIGYKREPV----DPFNFILSMHFVKV 1389
F+ ++ P VLVVGATGE GR++VRKL+LRG++VRVLVRNLYSSTLDLLGTG +F +G L +Y S+++A VDKVI AR+ E AELVE+EG+ NL+ AF D RV YG +TK+TLF F E W S+ + + + G +R+ Y SG A + + ++NL GFSG +RC GDGK + +LR + + G+++ +++ NKW++ R+ SSF + + ++DR ++Q+AI Y++ V D F L + ++KV
Sbjct: 51 FEDSDQPPEVLVVGATGETGRIIVRKLVLRGYNVRVLVRNLYSSTLDLLGTGVSFVKGSLDDYDSLLEATGDVDKVICAVGARNLEDAELVEYEGVSNLIRAFHDSRVQYYGRSEATKRTLFNFGNEEHLAKWKRVVPSEGFDGARPPRVNFQMTGPSRVAFMGHVYSTYSGQAEIRTVPARVNLRGFSGFVLRCIGDGKNFFLVLRTSESVKNGVEYVAELKSHM----NKWESVRIALSSFKPFDMKDGTKRRDAPQLDRGDIRQIAIQYRKPVVLPEKDDGRFYLGVDYLKV 341
BLAST of mRNA_Ecto-sp8_S_contig1030.494.1 vs. uniprot
Match: R7Q993_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q993_CHOCR) HSP 1 Score: 206 bits (525), Expect = 4.540e-58 Identity = 122/297 (41.08%), Postives = 176/297 (59.26%), Query Frame = 1
Query: 541 FDSEEEVPTVLVVGATGEMGRVVVRKLLLRGFSVRVLVRNLYSSTLDLLGTGATFAQGDLTNYRSIVDAVSGVDKVIFCAQARDPEQAELVEFEGLRNLLAAFQDQRVALYGDPYSTKKTLFRFNREADRELW--AVDQDSQQSAMWKSNKFGYGTFGSTRM---------YESGYATVESQLIKLNLSGFSGLAIRCCGDGKPYRFILRDRQYEETGIQFEMVIQASRWTKPNKWQTHRLPFSSFDAYLNGQVVQAEAGMEVDRASVQQLAIGYKREPVDPFN----FILSMHFVK 1386
F+ +++ P VLV GATGE GRV+VRKL+LRG++VRVLVR+L+SSTLDLLGTG +F +G L +Y S+++A VDKV+ +R E+AE +E+EG+ NL+ A+QD RV YG +TK LF F E D W V ++ ++ A K + + G R+ YE G A V + +LNL GFSGL +RC GDGK Y +LR G+++ I++ + NKW + R+P SSF AY + E+DR V+Q+AI +++ V P F L + ++K
Sbjct: 3 FEEDDQPPEVLVAGATGETGRVIVRKLVLRGYNVRVLVRDLFSSTLDLLGTGVSFVKGSLDDYDSLLEATGDVDKVVCAVGSRSVEEAEAIEYEGVGNLIRAYQDSRVQYYGRAEATKLVLFNFADEGDLGKWKRVVPEEGEEGA--KPPRVNFQITGPNRVAFMGHVFSKYE-GMAEVRTIPSRLNLRGFSGLLLRCIGDGKNYFIVLRTGAGVREGVEYCAQIKSYK----NKWGSLRIPISSFKAYDIKDHSRRRDAPELDRGDVRQMAIQFRKPVVSPEKDDGRFYLGVDYLK 292
BLAST of mRNA_Ecto-sp8_S_contig1030.494.1 vs. uniprot
Match: A0A7S2ZMD3_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZMD3_9RHOD) HSP 1 Score: 198 bits (503), Expect = 7.470e-55 Identity = 130/332 (39.16%), Postives = 180/332 (54.22%), Query Frame = 1
Query: 550 EEEVPTVLVVGATGEMGRVVVRKLLLRGFSVRVLVRNLYSSTLDLLGTGATFAQGDLTNYRSIVDAVSGVDKVIFCAQARDPEQAELVEFEGLRNLLAAFQDQRVALYGDPYSTKKTLFRFNREADRELWAVDQDSQQSAMW-------------KSNKFGYGTFGSTR----------------------MYE-----------SGYATVESQLIKLNLSGFSGLAIRCCGDGKPYRFILRDRQYEETGIQFEMVIQASRWTKPNKWQTHRLPFSSFDAY-LNGQVVQAEAGMEVDRASVQQLAIGYKREPV-----DPFNFILSMHFVKV 1389
EE+ P VLVVGATGE+GRV+VRKLLLRG+ VRVLVRNL++ TLDLLGTG ++ GD+T+ ++++AVSGVDKV+ +AR + VE +GL+ L+ AF D R A YG +TK TLF+FNRE D W S++ ++N G G + M+ +G+A + L KLN+ GFSGL +RC GDGK YR + R ++ G+ + +A T KW T RLP SF L+G V E E+DR+ V+Q+ I Y R+P+ DP F L++ ++KV
Sbjct: 80 EEQPPVVLVVGATGEVGRVIVRKLLLRGYQVRVLVRNLFTETLDLLGTGCSYVMGDITDPYALMEAVSGVDKVVCSVKARSESEVREVELDGLKKLVRAFHDVRHADYGRTEATKVTLFKFNREKDFRRWRSPGGSEEDDELVRKPARVDFRMNVRNNAVFTGQVGRRKARLECLLYGFVSGVLRAPIDVSMFSFDKKQQVFDTYTGHAELICDLKKLNMRGFSGLVVRCLGDGKQYRMVFRTGPGDKNGV----IYEAEFATVSGKWSTIRLPLVSFKPRSLSGSSVPRELE-ELDRSDVRQIKIEY-RKPLSNPERDPGFFSLTLDYMKV 405
BLAST of mRNA_Ecto-sp8_S_contig1030.494.1 vs. uniprot
Match: A0A7S3EC31_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EC31_9RHOD) HSP 1 Score: 196 bits (499), Expect = 3.020e-53 Identity = 129/331 (38.97%), Postives = 179/331 (54.08%), Query Frame = 1
Query: 550 EEEVPTVLVVGATGEMGRVVVRKLLLRGFSVRVLVRNLYSSTLDLLGTGATFAQGDLTNYRSIVDAVSGVDKVIFCAQARDPEQAELVEFEGLRNLLAAFQDQRVALYGDPYSTKKTLFRFNREADRELWAVDQDSQQSAMW-------------KSNKFGYGTFGSTR----------------------MYE-----------SGYATVESQLIKLNLSGFSGLAIRCCGDGKPYRFILRDRQYEETGIQFEMVIQASRWTKPNKWQTHRLPFSSFDAY-LNGQVVQAEAGMEVDRASVQQLAIGYKREPV-----DPFNFILSMHFVK 1386
EE+ P VLVVGATGE+GRV+VRKLLLRG+ VRVLVRNL++ TLDLLGTG ++ GD+T+ ++++AVSGVDKV+ +AR + VE +GL+ L+ AF D R A YG +TK TLF+FNRE D W S++ ++N G G + M+ +G+A + L KLN+ GFSGL +RC GDGK YR + R ++ G+ + +A T KW T RLP SF L+G V E E+DR+ V+Q+ I Y R+P+ DP F L++ ++K
Sbjct: 80 EEQPPVVLVVGATGEVGRVIVRKLLLRGYQVRVLVRNLFTETLDLLGTGCSYVMGDITDPYALMEAVSGVDKVVCSVKARSESEVREVELDGLKKLVRAFHDVRHADYGRTEATKVTLFKFNREKDFRRWRSPGGSEEDDELVRKPARVDFRMNVRNNAVFTGQVGRRKARLECLLYGFVSGVLRAPIDVSMFSFDKKQQVFDTYTGHAELICDLKKLNMRGFSGLVVRCLGDGKQYRMVFRTGPGDKNGV----IYEAEFATVSGKWSTIRLPLVSFKPRSLSGSSVPRELE-ELDRSDVRQIKIEY-RKPLSNPERDPGFFSLTLDYMK 404
BLAST of mRNA_Ecto-sp8_S_contig1030.494.1 vs. uniprot
Match: A0A5J4Z1C0_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z1C0_PORPP) HSP 1 Score: 194 bits (494), Expect = 2.130e-52 Identity = 132/346 (38.15%), Postives = 192/346 (55.49%), Query Frame = 1
Query: 427 NLRSTLADTLGQITGTASPLEGVKIRSLEEYE-KRLYSPFDSEEEVPTVLVVGATGEMGRVVVRKLLLRGFSVRVLVRNLYSSTLDLLGTGATFAQGDLTN-YRSIVDAVSGVDKVIFCAQARDPEQAELVEFEGLRNLLAAFQDQRVALYGDPYSTKKTLFRFNREADREL--WAVDQDS--------------QQSAMWKSNKFGYGTFGSTRMYESGYATVESQLIKLNLSGFSGLAIRCCGDGKPYRFILRDRQYEETGIQFEMVIQASRWTKPNKWQTHRLPFSSF----DAYLNGQVVQAEAGMEVDRASVQQLAIGYKREPVDPF----NFILSMHFVK 1386
N + D + I G + +SL +Y+ S FD+EEE P VLVVGATG +GRVVVRKLLLRGF VRV+VRNL+SSTLDLL + F +GD+ + + +A+SGVDKVI AR ++ + VE +GL+NL+ AF D RV +G STK TLF+F+R+ + + W V D + +++ ++K G +G A +L + NL GFSG+ +R GDG YR L+ + G+ + AS T+ +KW T RLPFSSF D +N +V AE E+DR ++Q +A+ Y + +P +F L++ ++K
Sbjct: 71 NPLENVQDAIDGIRGLLGLQRRSRTQSLLDYDPSSAQSEFDNEEEAPLVLVVGATGRVGRVVVRKLLLRGFKVRVMVRNLFSSTLDLLPSSVEFVKGDVRDSIFELQEALSGVDKVICLVGARSEDEMQEVEVQGLQNLVQAFHDIRVQEFGPEESTKITLFKFSRQGAKYMDRWVVPTDDIGERLASAGLVAKPPRVSLFMNDKGNGVLVGKVFEKYNGVAQAVLKLDQPNLKGFSGVILRVIGDGNTYRIALQCGSTQSAGVSYV----ASFKTEKSKWATIRLPFSSFIAMSDKQMNLRVRDAE---ELDRTNIQSIALQYTKSQDNPEKESGDFYLAVDYIK 409
BLAST of mRNA_Ecto-sp8_S_contig1030.494.1 vs. uniprot
Match: A0A4D9D9K4_9STRA (NmrA domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9K4_9STRA) HSP 1 Score: 195 bits (495), Expect = 2.150e-52 Identity = 132/345 (38.26%), Postives = 193/345 (55.94%), Query Frame = 1
Query: 361 ERVALKLPEIANPFKKAFDAGQNLRSTLADTLGQITGTASPLEGVKIRSLEEY-----EKRLYSPFDSEEEVPTVLVVGATGEMGRVVVRKLLLRGFSVRVLVRNLYSSTLDLLGTGATFAQGDLTNYRSIVDAVSGVDKVIFCAQARDPEQAELVEFEGLRNLLAAFQDQRVALYGDPYSTKKTLFRFNREADRELWAVDQDSQQSA--MW--KSNKFGYGTF-GSTRMYESGYATVESQLIKLNLSGFSGLAI--RCCGDGKP-YRFILRDRQYEETGIQFEMVIQASRWTKPNKWQTHRLPFSSFDAYLNGQVVQAEAG-----MEVDRASVQQLAIGYKRE 1341
E K + NP + AG+ R L ++LGQ+ A ++ E+Y +K +Y+ E+ PTVLVVGATG++GR VVRKL+L+G+ V+VLVRNLYS+TL+LLGTG ++ +GDL++ S+ A G DKV++ AQAR+ A VE+ GLRNL AFQD RV+ G +TK+TLF+F + ADR +WAV S + A W + + G F GS + G +ES+ + LNLS F GL + + GD + +RF++R Y E G+Q+E+ + R N++ R+ F F +G G +D V+Q A+ RE
Sbjct: 81 EAERTKNKKFLNPIEIPIKAGRAARRAL-ESLGQVEEPAP-------KNPEDYRLYFDKKFMYAIPAPGEKTPTVLVVGATGDIGRQVVRKLILKGYRVQVLVRNLYSTTLNLLGTGVSYVKGDLSDLSSLRTACDGADKVVYVAQAREDGDARTVEYLGLRNLAQAFQDTRVSDAGKRVATKRTLFKFRKPADRGVWAVATPSAEGAEGAWTVQDERSGRPAFVGSLPVGPGGSMVLESKKLGLNLSKFGGLLMLFKAQGDAQTSFRFVIRTSAYAEQGVQYEIALPLVR----NRFTAFRMNFRDFVPMKDGMPYAGVLGGLGGVTALDPGDVKQFAVMAVRE 413
BLAST of mRNA_Ecto-sp8_S_contig1030.494.1 vs. uniprot
Match: M2VV10_GALSU (Transcription repressor n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VV10_GALSU) HSP 1 Score: 182 bits (463), Expect = 4.470e-48 Identity = 108/270 (40.00%), Postives = 151/270 (55.93%), Query Frame = 1
Query: 568 VLVVGATGEMGRVVVRKLLLRGFSVRVLVRNLYSSTLDLLGTGATFAQGDLTNYRSIVDAVSGVDKVIFCAQARDPEQAELVEFEGLRNLLAAFQDQRVALYGDPYSTKKTLFRFNREADRELWAVDQDSQQSAM-------------WKSNKFGYGTF-GSTRMYESGYATVESQLIKLNLSGFSGLAIRCCGDGKPYRFILRDRQYEETGIQFEMVIQASRWTKPNKWQTHRLPFSSFDAYLNGQVVQAE-AGMEVDRASVQQLAIGY 1332
VLV+GATG++G ++ +KLLLRG+ VRVLVRNLYSSTLD +GTG TFA+GD+ S+ DA+ +DKVI+ D ++ E VEF GL+N++ A D + YG S K TLF+F+R+ D E W D +S + + N F G + G A + S++ + NL F GL IRC GDGK Y LR R + +++ + T PNKW T RLPFS F A +++ E++ + V QLAI +
Sbjct: 118 VLVLGATGKIGNIITKKLLLRGYRVRVLVRNLYSSTLDAVGTGCTFAKGDVRELSSLYDAMENIDKVIWAVGTSDSQETETVEFNGLQNVIKALHDSKFQQYGSEESAKVTLFKFDRKTDFENWKPVLDEFRSRLASVGLQKRPPKIEYMQNSRNNAVFTGKIFDADGGTAEIASKIDQHNLEEFEGLIIRCIGDGKTYGLELRTRSGDNAQVEYLARFR----TVPNKWLTIRLPFSKFVAVPKEGILRPVLVTEEINLSDVYQLAINF 383
BLAST of mRNA_Ecto-sp8_S_contig1030.494.1 vs. uniprot
Match: A0A1X6PIK3_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PIK3_PORUM) HSP 1 Score: 181 bits (458), Expect = 5.050e-47 Identity = 119/305 (39.02%), Postives = 158/305 (51.80%), Query Frame = 1
Query: 562 PTVLVVGATGEMGRVVVRKLLLRGFSVRVLVRNLYSSTLDLLGTGATFAQGDLTNYRSIVDAVSGVDKVIFCAQARDPEQAEL--------------VEFEGLRNLLAAFQDQRVALYGDPYSTKKTLFRFNREADRELWAVDQDSQQSAMW----KSNKFGYGTFGSTR---------MYESGYATVESQLIKLNLSGFSGLAIRCCGDGKPYRFILRDRQYEETGIQFEMVIQASRWTKPNKWQTHRLPFSSFDAYLNGQVV--------------QAEAGMEVDRASVQQLAIGYKREPVDP 1353
P VLVVGATGE GR++VRKL+LRGF VRVLVR+L++ TLD LGTG +F +GDL + +++DAVSGVDK++ ARD E VE+ G+ L+ AF D R +YG ++K TLF+F R A + W Q S A + + + G++R +YE G A + + NL GFSGL +R G+GK YR +LR R G+Q+ T NKW T RLPFS F Y G QA E+DR V Q+A+ Y + V P
Sbjct: 125 PEVLVVGATGETGRIIVRKLVLRGFRVRVLVRDLFTKTLDTLGTGVSFVKGDLRDADTLLDAVSGVDKIVCAINARDTEAPAAGADAQGDGDIGYADVEYGGVARLVRAFHDSRHQMYGKAEASKVTLFQFGRPAAFDAWTAVQPSSALAEMGMAARPARVSWTMTGASRAAFLGQVFEVYE-GVAEAKCAPRRYNLLGFSGLVLRVIGNGKRYRLVLRTRGAAVVGLQYVATFA----TVKNKWTTVRLPFSEFTPYAAGTASPWQLPRTTGEDDEDQAADVPELDRRDVVQMAVQYAKPEVAP 424 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig1030.494.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig1030.494.1 >prot_Ecto-sp8_S_contig1030.494.1 ID=prot_Ecto-sp8_S_contig1030.494.1|Name=mRNA_Ecto-sp8_S_contig1030.494.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=463bp MRRVAEAVALFCVCRQHGHDMSASAFAPPPVTAGSPVAKSSSPPAGLRRVback to top mRNA from alignment at Ecto-sp8_S_contig1030:352..10567- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig1030.494.1 ID=mRNA_Ecto-sp8_S_contig1030.494.1|Name=mRNA_Ecto-sp8_S_contig1030.494.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=10216bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1030:352..10567- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig1030:352..10567- >mRNA_Ecto-sp8_S_contig1030.494.1 ID=mRNA_Ecto-sp8_S_contig1030.494.1|Name=mRNA_Ecto-sp8_S_contig1030.494.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1389bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1030:352..10567- (Ectocarpus species8 EcLAC_412)back to top |