mRNA_Ecto-sp8_S_contig10264.440.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10264.440.1 vs. uniprot
Match: D8LEW1_ECTSI (D27-like_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEW1_ECTSI) HSP 1 Score: 474 bits (1221), Expect = 2.420e-164 Identity = 237/264 (89.77%), Postives = 238/264 (90.15%), Query Frame = 2
Query: 209 QVIRGRAGPTDATPTYDDTRPLDRILLGLFRSKLAEEVGGDGDAFEPGYDGLMDMIKVLNEKFPSKRKTQEASRRVLKSLFPSWLPASFAVMFSKPFPAFSSRLNAWVTLVASQWLMGPSKLNDIEVRRSRNYSSNQQRAQLPCLWIDDGTVGVGHGLLVERCRFLEAAGCASVCMNTCKARRRAVPTEEFFAKDMGLALEMTPNYEDFSCQFSFNKTPLARDMDEAFRVACFEQCPSRGALRQPNQPAVARCHQIDIDEDGSS 1000
+VIRGRAGPTDATPTYDDTRPLDRILLGLFRSKLAEEVGGDGDAFEPGYDGLMDMIKVLNEKFPSKRKTQEASRRVLKSLFPSWLPASFAVMFSKPFPAFSSRLNAWVTLVASQWLMGPSKLNDIE IDDGTVGVGHGLLVERCRFLEAAGCASVCMNTCK VPTEEFFAKDMGLALEMTPNYEDFSCQFSFNKTPLARDMDEAFRVACFEQCPSRGALRQPNQPAVARCHQIDIDED SS
Sbjct: 80 KVIRGRAGPTDATPTYDDTRPLDRILLGLFRSKLAEEVGGDGDAFEPGYDGLMDMIKVLNEKFPSKRKTQEASRRVLKSLFPSWLPASFAVMFSKPFPAFSSRLNAWVTLVASQWLMGPSKLNDIE--------------------IDDGTVGVGHGLLVERCRFLEAAGCASVCMNTCK-----VPTEEFFAKDMGLALEMTPNYEDFSCQFSFNKTPLARDMDEAFRVACFEQCPSRGALRQPNQPAVARCHQIDIDEDDSS 318
BLAST of mRNA_Ecto-sp8_S_contig10264.440.1 vs. uniprot
Match: A0A6H5K8Y9_9PHAE (PROTEASOME_ALPHA_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y9_9PHAE) HSP 1 Score: 310 bits (793), Expect = 4.750e-95 Identity = 187/347 (53.89%), Postives = 192/347 (55.33%), Query Frame = 2
Query: 209 QVIRGRAGPTDATPTYDDTRPLDRILLGLFRSKLAEEVGGDGDAFEPGYDGLMDMIKVLNEKFPSKRKTQEASRRVLKSLFPSWLPASFAVMFSKPFPAFSSRLNAWVTLVASQWLMGPSKLNDIEVRRSRNYSSNQQRAQLPCLWIDDGTVGVGHGLLVERCRFLEAAGCASVCMNTCKARRRAVPTEEFFAKDMGLALEMTPNYEDFSCQFSFNKTPLARDMDEAFRVACFEQCPSRGALRQPNQPAVARCHQIDIDEDGSS*TPFTFLVSCMFFFI*KYRSLKMFFWYA*AKRFRMTRDRAAALEGEGRAYST*LVPWWGRG--VVAEMQTRLRNLGSAMADPC 1243
+VIRGRAGPT ATPTYDDTRPLDRILLGLFRSKLAEEVG DGDAFEPGYDGLMDMIKVLNEKFPSKRKTQEASRRVLKSLFP+WLPASFAVMFSKPFPAFSSRLNAWVTLVASQWLMGPSKLND+EV PTEEFFAKDMGLALEMTPNYEDFSCQ AKRFR+TRDRAAALEGEGRAY V VVAE QTRLR+LGSAMADPC
Sbjct: 80 KVIRGRAGPTAATPTYDDTRPLDRILLGLFRSKLAEEVGEDGDAFEPGYDGLMDMIKVLNEKFPSKRKTQEASRRVLKSLFPAWLPASFAVMFSKPFPAFSSRLNAWVTLVASQWLMGPSKLNDVEV-----------------------------------------------------------PTEEFFAKDMGLALEMTPNYEDFSCQ---------------------------------------------------------------------------------AKRFRITRDRAAALEGEGRAYIVGAVVGQRSNAVVVAEKQTRLRSLGSAMADPC 286
BLAST of mRNA_Ecto-sp8_S_contig10264.440.1 vs. uniprot
Match: A0A835ZDY9_9STRA (D27-like_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDY9_9STRA) HSP 1 Score: 273 bits (697), Expect = 1.170e-86 Identity = 135/238 (56.72%), Postives = 171/238 (71.85%), Query Frame = 2
Query: 281 ILLGLFRSKLAEEVGGDGDAFEPGYDGLMDMIKVLNEK--FPSKRKTQEASRRVLKSLFPSWLPASFAVMFSKPFPAFSSRLNAWVTLVASQWLMGPSKLNDIEVRRSRNYSSNQQRAQLPCLWIDDGTVGVGHGLLVERCRFLEAAGCASVCMNTCKARRRAVPTEEFFAKDMGLALEMTPNYEDFSCQFSFNKTPLARDMDEAFRVACFEQCPSRGALRQPNQPAVARCHQIDIDE 988
+LLGLFR KLA E+ DG +PGY GL++MI+ LN+ +P+ TQ+A+R+VL+SLFP WLP +FAVMFSKPFP FS R+NAWVTLVASQWLMGPSK+ND+E ID G +GVGHGLLV+RCR+LE AGCASVC+NTCK +PT+EFF KDMGL L+MTP+Y+DFSCQFSF K PL + DE F VACFEQCP++ + ++ CH++ ++E
Sbjct: 1 MLLGLFRKKLAAELQYDGS--DPGYAGLIEMIRSLNDGPGYPTAHDTQQAARKVLQSLFPPWLPGAFAVMFSKPFPQFSCRMNAWVTLVASQWLMGPSKINDVE--------------------IDGGQMGVGHGLLVKRCRYLEEAGCASVCVNTCK-----IPTQEFFMKDMGLPLQMTPDYDDFSCQFSFGKIPLEPEQDEVFAVACFEQCPNKASTKR-------LCHKVGLEE 204
BLAST of mRNA_Ecto-sp8_S_contig10264.440.1 vs. uniprot
Match: A0A8J4BT63_9CHLO (D27-like_C domain-containing protein n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4BT63_9CHLO) HSP 1 Score: 259 bits (661), Expect = 2.010e-80 Identity = 125/235 (53.19%), Postives = 161/235 (68.51%), Query Frame = 2
Query: 227 AGPTDATPTYDD--TRPLDRILLGLFRSKLAEEVGGDGDAFEPGYDGLMDMIKVLNEKFPSKRKTQEASRRVLKSLFPSWLPASFAVMFSKPFPAFSSRLNAWVTLVASQWLMGPSKLNDIEVRRSRNYSSNQQRAQLPCLWIDDGTVGVGHGLLVERCRFLEAAGCASVCMNTCKARRRAVPTEEFFAKDMGLALEMTPNYEDFSCQFSFNKTPLARDMDEAFRVACFEQCPSR 925
AGPTD P+Y D ++P++ +++ LFR K+ +G D + + GYD ++D+ + LN KF + +TQEA+R +L +LFPSWLP +F VMFSKPFP FS RLNA T + QWLMGP K+ND+E ID G VG GHG+LVERCR+LE AGCASVC+N+CK +PT+ FF+KDMGL L MTPNYEDFSCQF+F KTP+ +MDEAF CF QCPS+
Sbjct: 42 AGPTDPAPSYRDIDSQPVNVVVMALFRRKMVAALGSDSELY--GYDAIIDLTRRLNSKFRTGAETQEATRAILNALFPSWLPGAFKVMFSKPFPEFSCRLNALATALTCQWLMGPCKVNDVE--------------------IDGGIVGKGHGVLVERCRYLEQAGCASVCINSCK-----IPTQTFFSKDMGLQLTMTPNYEDFSCQFAFGKTPMLAEMDEAFTTPCFRQCPSK 249
BLAST of mRNA_Ecto-sp8_S_contig10264.440.1 vs. uniprot
Match: A8IC34_CHLRE (Predicted protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8IC34_CHLRE) HSP 1 Score: 254 bits (649), Expect = 1.930e-78 Identity = 130/255 (50.98%), Postives = 161/255 (63.14%), Query Frame = 2
Query: 224 RAGPTDATPTYD--DTRPLDRILLGLFRSKLAEEVGGDGDAFEPGYDGLMDMIKVLNEKFPSKRKTQEASRRVLKSLFPSWLPASFAVMFSKPFPAFSSRLNAWVTLVASQWLMGPSKLNDIEVRRSRNYSSNQQRAQLPCLWIDDGTVGVGHGLLVERCRFLEAAGCASVCMNTCKARRRAVPTEEFFAKDMGLALEMTPNYEDFSCQFSFNKTPLARDMDEAFRVACFEQCPSR-------GALRQPNQPAVA 961
+AGP DA P Y D++PL+ I++ LFR K+ E +G D GYD ++D+ + LN KF + +TQEA+R +L +LFPSWLP +F VMFS+P P FS RLNA T + QWLMGP K+ND+E ID G VG GHG+LVERCR+LE AGCASVC+N+CK VPT+ FF KDMGL L MTPNY+DFSCQFSF KTP D D AF CF QCPS+ G + P+ P A
Sbjct: 50 QAGPVDAAPDYKPIDSQPLNIIVMALFRRKMVEALGSDSKL--SGYDAIIDLTRKLNTKFRTAAETQEATRGILNALFPSWLPGAFKVMFSRPLPEFSCRLNALATAMTCQWLMGPCKVNDVE--------------------IDGGKVGTGHGVLVERCRYLEQAGCASVCINSCK-----VPTQSFFEKDMGLPLTMTPNYDDFSCQFSFGKTPDPVDRDPAFATPCFTQCPSKRSRTPVCGGIELPSMPGAA 277
BLAST of mRNA_Ecto-sp8_S_contig10264.440.1 vs. uniprot
Match: A0A7J7QQS2_9CHLO (D27-like_C domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QQS2_9CHLO) HSP 1 Score: 252 bits (643), Expect = 3.900e-78 Identity = 121/238 (50.84%), Postives = 159/238 (66.81%), Query Frame = 2
Query: 224 RAGPTDATPTYD--DTRPLDRILLGLFRSKLAEEVGGDGDAFEPGYDGLMDMIKVLNEKFPSKRKTQEASRRVLKSLFPSWLPASFAVMFSKPFPAFSSRLNAWVTLVASQWLMGPSKLNDIEVRRSRNYSSNQQRAQLPCLWIDDGTVGVGHGLLVERCRFLEAAGCASVCMNTCKARRRAVPTEEFFAKDMGLALEMTPNYEDFSCQFSFNKTPLARDMDEAFRVACFEQCPSRGA 931
+AGP + P Y D++PL+++++ LFR K+ +G D GY+ ++D+ + LN + R+ Q +R++LKSLFPSWLP +FAVMFSKP P FS +LNA T + QWLMGP K+ND+E +DDG+VG G G+LVERCR+LE AGCAS+C+N+CK VPT+EFF KDMGL L MTPNYEDFSCQF+F K PL + +DEAF CF+QCPSR A
Sbjct: 1 QAGPVEPVPDYTAIDSQPLNQVVMALFRRKMVAAIGSDSQL--SGYEAIIDLTRRLNASYSEARQVQLTTRKILKSLFPSWLPGAFAVMFSKPLPEFSCKLNALATALTCQWLMGPCKVNDVE--------------------LDDGSVGQGMGVLVERCRYLEQAGCASICINSCK-----VPTQEFFEKDMGLPLTMTPNYEDFSCQFTFGKAPLPQQLDEAFSTPCFQQCPSRAA 211
BLAST of mRNA_Ecto-sp8_S_contig10264.440.1 vs. uniprot
Match: I0YX40_COCSC (D27-like_C domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YX40_COCSC) HSP 1 Score: 249 bits (636), Expect = 3.840e-77 Identity = 122/247 (49.39%), Postives = 159/247 (64.37%), Query Frame = 2
Query: 224 RAGPTDATPTYD--DTRPLDRILLGLFRSKLAEEVGGDGDAFEPGYDGLMDMIKVLNEKFPSKRKTQEASRRVLKSLFPSWLPASFAVMFSKPFPAFSSRLNAWVTLVASQWLMGPSKLNDIEVRRSRNYSSNQQRAQLPCLWIDDGTVGVGHGLLVERCRFLEAAGCASVCMNTCKARRRAVPTEEFFAKDMGLALEMTPNYEDFSCQFSFNKTPLARDMDEAFRVACFEQCPSRGALRQPNQPAV 958
+AGP P+Y+ D++PL+R ++ LFR K+ +G + D + GYD ++D+ ++LN K + R TQ +R++L SLFPSWLP +F VMFSKP P S +LNAWVT++ QWLMGP K+ND+E +D G +G G G+LVERCR+LE GCASVC+N+CK +PT+EFFAKDMGL L MTPNYEDFSCQFSF TP +DEAF CF QCPS+ R P
Sbjct: 7 KAGPETPAPSYESIDSQPLNRAIMSLFRQKMVAAIGKNSD--KEGYDAIVDLTRLLNSKSSNPRDTQVKTRQILLSLFPSWLPPAFKVMFSKPMPEVSCQLNAWVTMLTCQWLMGPCKVNDVE--------------------LDGGRIGSGQGVLVERCRYLEETGCASVCLNSCK-----IPTQEFFAKDMGLPLTMTPNYEDFSCQFSFGLTPKPAAIDEAFATPCFSQCPSKQRHRGDRCPGA 226
BLAST of mRNA_Ecto-sp8_S_contig10264.440.1 vs. uniprot
Match: A0A0D2MYG1_9CHLO (D27-like_C domain-containing protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MYG1_9CHLO) HSP 1 Score: 250 bits (639), Expect = 9.180e-77 Identity = 129/255 (50.59%), Postives = 162/255 (63.53%), Query Frame = 2
Query: 224 RAGPTDATPTYD--DTRPLDRILLGLFRSKLAEEVGGDGDAFEPGYDGLMDMIKVLNEKFPSKRKTQEASRRVLKSLFPSWLPASFAVMFSKPFPAFSSRLNAWVTLVASQWLMGPSKLNDIEVRRSRNYSSNQQRAQLPCLWIDDGTVGVGHGLLVERCRFLEAAGCASVCMNTCKARRRAVPTEEFFAKDMGLALEMTPNYEDFSCQFSFNKTPLARDMDEAFRVACFEQCPSR-------GALRQPNQPAVA 961
+AGP P+Y D +PL+R+++ LFR K+ E +G D GY ++D+ + LN ++ + R TQ A+RR+L SLFPSWLP +F VMFS P PAFS RLNA T + QWLMGP K+ND+E +D G VG G G+LVERCR+LE AGCAS+C+N+CK VPT+EFF KDMGL L MTPNYEDFSCQF+F KTPL + DEAF CF QCPS+ GA R + P VA
Sbjct: 64 QAGPGTPAPSYAEIDAQPLNRVVMALFRRKMVESIGSDSQL--QGYPAIIDLTRRLNRQYQTARDTQLATRRILNSLFPSWLPGAFKVMFSAPLPAFSCRLNALATALTCQWLMGPCKVNDVE--------------------LDSGEVGSGMGVLVERCRYLEEAGCASICINSCK-----VPTQEFFEKDMGLPLTMTPNYEDFSCQFAFGKTPLPQSQDEAFSTPCFTQCPSKKRTFSDGGAGRPGDCPNVA 291
BLAST of mRNA_Ecto-sp8_S_contig10264.440.1 vs. uniprot
Match: A0A383VZB0_TETOB (D27-like_C domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VZB0_TETOB) HSP 1 Score: 248 bits (633), Expect = 3.110e-75 Identity = 129/285 (45.26%), Postives = 168/285 (58.95%), Query Frame = 2
Query: 185 LSYSAHYAQVIRGRAGPTDATPTYD--DTRPLDRILLGLFRSKLAEEVGGDGDAFEPGYDGLMDMIKVLNEKFPSKRKTQEASRRVLKSLFPSWLPASFAVMFSKPFPAFSSRLNAWVTLVASQWLMGPSKLNDIEVRRSRNYS-----------------------SNQQRAQLPCLWI-----------DDGTVGVGHGLLVERCRFLEAAGCASVCMNTCKARRRAVPTEEFFAKDMGLALEMTPNYEDFSCQFSFNKTPLARDMDEAFRVACFEQCPSRGA 931
L ++ A +AG + P Y D++PL+++++ LFR K+ +G D GY+ ++D+ + LN + R+ Q +R +L SLFPSWLP +F VMFSKP P FS +LNA T + QWLMGP K+ND+E+ S Q R QL C W+ DDG+VG G G+LVERCR+LE AGCAS+C+N+CK VPT+EFF KDMGL L MTPNYEDFSCQFSF KTPL + +DEAF CF+QCPSR A
Sbjct: 32 LRFTHSRAAAATRQAGTAEPVPDYAAIDSQPLNQVVMALFRRKMVAAIGSDSQL--SGYEAIIDLTRRLNASYSEARQVQLTTRGILNSLFPSWLPGAFKVMFSKPLPEFSCKLNALATALTCQWLMGPCKVNDVELDDGSVSSXXXXXXXXXXXXXXXXXXXXXXXQQQWRQQLTCQWLMGPCKVNNVELDDGSVGQGMGVLVERCRYLEQAGCASICINSCK-----VPTQEFFEKDMGLPLTMTPNYEDFSCQFSFGKTPLPQQLDEAFSTPCFQQCPSRAA 309
BLAST of mRNA_Ecto-sp8_S_contig10264.440.1 vs. uniprot
Match: A0A2V0P122_9CHLO (D27-like_C domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P122_9CHLO) HSP 1 Score: 245 bits (626), Expect = 2.120e-74 Identity = 121/236 (51.27%), Postives = 153/236 (64.83%), Query Frame = 2
Query: 224 RAGPTDATPTYD--DTRPLDRILLGLFRSKLAEEVGGDGDAFEPGYDGLMDMIKVLNEKFPSKRKTQEASRRVLKSLFPSWLPASFAVMFSKPFPAFSSRLNAWVTLVASQWLMGPSKLNDIEVRRSRNYSSNQQRAQLPCLWIDDGTVGVGHGLLVERCRFLEAAGCASVCMNTCKARRRAVPTEEFFAKDMGLALEMTPNYEDFSCQFSFNKTPLARDMDEAFRVACFEQCPSR 925
+AGP A P Y D +PL+R+++ LFR K+AE +G D GY ++D+ + LN ++P+ R TQ +R +L SLFP WLP +F MFS+P PA S RLNA+ T + QWLMGP K+ND+E ID G VG G G+LVERCR+LE AGCAS+C+N+CK VPT+EFF KDMGL L MTPNY+DFSCQF+F KTP + DEAF CF QCPSR
Sbjct: 21 QAGPAAAAPDYAGVDAQPLNRVVMALFRRKMAEAIGSDSQL--QGYPAIIDLTRRLNRQYPTARDTQLTTRAILNSLFPGWLPGAFRAMFSRPLPALSCRLNAFATALTCQWLMGPCKVNDVE--------------------IDGGQVGAGMGVLVERCRYLEEAGCASICINSCK-----VPTQEFFEKDMGLPLTMTPNYDDFSCQFAFGKTPQPQAEDEAFSTPCFTQCPSR 229 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10264.440.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10264.440.1 >prot_Ecto-sp8_S_contig10264.440.1 ID=prot_Ecto-sp8_S_contig10264.440.1|Name=mRNA_Ecto-sp8_S_contig10264.440.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=213bp MDMIKVLNEKFPSKRKTQEASRRVLKSLFPSWLPASFAVMFSKPFPAFSSback to top mRNA from alignment at Ecto-sp8_S_contig10264:2950..5600+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10264.440.1 ID=mRNA_Ecto-sp8_S_contig10264.440.1|Name=mRNA_Ecto-sp8_S_contig10264.440.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=2651bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10264:2950..5600+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10264:2950..5600+ >mRNA_Ecto-sp8_S_contig10264.440.1 ID=mRNA_Ecto-sp8_S_contig10264.440.1|Name=mRNA_Ecto-sp8_S_contig10264.440.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=639bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10264:2950..5600+ (Ectocarpus species8 EcLAC_412)back to top |