prot_Ecto-sp8_S_contig102052.337.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig102052.337.1
Unique Nameprot_Ecto-sp8_S_contig102052.337.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length75
Homology
BLAST of mRNA_Ecto-sp8_S_contig102052.337.1 vs. uniprot
Match: D7FVF3_ECTSI (GBF1, ArfGEF protein of the BIG/GBF subfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVF3_ECTSI)

HSP 1 Score: 144 bits (364), Expect = 1.560e-38
Identity = 73/75 (97.33%), Postives = 74/75 (98.67%), Query Frame = 0
Query:    1 IRCCSILSRAFLHHLQALTSLPEFGKLWLDTVTLISRNLEANGSSGADGVAAESCQQILTNMVMVVAYAGLLGGQ 75
            IRCCSILSRAFLHHLQALTSLP FGKLWLDTVTLISRNLEANGSSGADGVAAESCQQILTN+VMVVAYAGLLGGQ
Sbjct: 1647 IRCCSILSRAFLHHLQALTSLPGFGKLWLDTVTLISRNLEANGSSGADGVAAESCQQILTNLVMVVAYAGLLGGQ 1721          
BLAST of mRNA_Ecto-sp8_S_contig102052.337.1 vs. uniprot
Match: A0A6H5JJL6_9PHAE (SEC7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJL6_9PHAE)

HSP 1 Score: 143 bits (361), Expect = 3.960e-38
Identity = 73/75 (97.33%), Postives = 73/75 (97.33%), Query Frame = 0
Query:    1 IRCCSILSRAFLHHLQALTSLPEFGKLWLDTVTLISRNLEANGSSGADGVAAESCQQILTNMVMVVAYAGLLGGQ 75
            IRCCSILSRAFLHHLQALTSLP FGKLWLDTVTLISRNLEAN SSGADGVAAESCQQILTNMVMVVAYAGLLGGQ
Sbjct: 1679 IRCCSILSRAFLHHLQALTSLPGFGKLWLDTVTLISRNLEANSSSGADGVAAESCQQILTNMVMVVAYAGLLGGQ 1753          
BLAST of mRNA_Ecto-sp8_S_contig102052.337.1 vs. uniprot
Match: A0A836CJX6_9STRA (Sec7 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJX6_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 2.310e-11
Identity = 34/71 (47.89%), Postives = 51/71 (71.83%), Query Frame = 0
Query:    1 IRCCSILSRAFLHHLQALTSLPEFGKLWLDTVTLISRNLEANGSSGADGVAAESCQQILTNMVMVVAYAGL 71
            +RCC+++SRA L +L  L +LP F ++WL  + L+  N+ A  + GA  V  E+CQQI+TNM+MVVA+AG+
Sbjct: 1577 LRCCTLVSRALLQNLPLLAALPGFNRIWLTLLALLGTNISAT-APGA--VIHETCQQIITNMIMVVAHAGV 1644          
BLAST of mRNA_Ecto-sp8_S_contig102052.337.1 vs. uniprot
Match: A0A7S2FKT0_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2FKT0_9EUKA)

HSP 1 Score: 50.1 bits (118), Expect = 1.860e-5
Identity = 27/70 (38.57%), Postives = 43/70 (61.43%), Query Frame = 0
Query:    1 IRCCSILSRAFLHHLQALTSLPEFGKLWLDTVTLISRNLEANGSSGADGVAAESCQQILTNMVMVVAYAG 70
            +R  ++LS+AFLHHL  L +LP F +LWL  + L+   L+AN       +  E+  + L NM++V++ AG
Sbjct:   77 LRAVTLLSKAFLHHLATLLTLPAFTRLWLRALELLQSFLKANSE-----LLQEAVPETLKNMLLVMSTAG 141          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig102052.337.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FVF3_ECTSI1.560e-3897.33GBF1, ArfGEF protein of the BIG/GBF subfamily n=1 ... [more]
A0A6H5JJL6_9PHAE3.960e-3897.33SEC7 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A836CJX6_9STRA2.310e-1147.89Sec7 domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S2FKT0_9EUKA1.860e-538.57Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig102052contigEcto-sp8_S_contig102052:43..267 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig102052.337.1mRNA_Ecto-sp8_S_contig102052.337.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig102052 43..267 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig102052.337.1 ID=prot_Ecto-sp8_S_contig102052.337.1|Name=mRNA_Ecto-sp8_S_contig102052.337.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=75bp
IRCCSILSRAFLHHLQALTSLPEFGKLWLDTVTLISRNLEANGSSGADGV
AAESCQQILTNMVMVVAYAGLLGGQ
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