prot_Ecto-sp8_S_contig9843.31653.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9843.31653.1
Unique Nameprot_Ecto-sp8_S_contig9843.31653.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length530
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9843.31653.1 vs. uniprot
Match: D7G1I2_ECTSI (PsbB mRNA maturation factor Mbb1, chloroplast n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1I2_ECTSI)

HSP 1 Score: 677 bits (1746), Expect = 4.590e-233
Identity = 432/473 (91.33%), Postives = 441/473 (93.23%), Query Frame = 0 
Query:    1 DKALTVDPQDGHSWLLLARTREAMGDVNAASDVFKRAVAECPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAREILEGSRQSVAISQALAELLATHGEVEEGRGLLQKAMDRLEKAASARSKRSGGGGSPGPSAAWATAGDRPKKRSAEEAEDADQGVTALLMAWANFEESRGDEKRALELMAKAMENEPDNARARVGRARFEIRRGNMRDARIFLSEAANLPQEDGTLFSMWATXXXXXXXXETALKIAEAATARFPWDKFLLQTMGTVHGKLGRYEEAIECYRRSIALSPAAPAYVAWALVVAKLAERAERNASSKKTAAGQEDGVVAGDPVVEYVGDASDDGTILGEASDAVAGGSXXXXXXXXXXXXXXXEVSRTEEEEEGPPSYEEARRLFELGVLADPTHGPLYNAYGSMEAKLGNVEHARSVYKRGIAARCSGAVHVWQG 473
            ++ALTVDPQDGHSWLLLARTREAMGDVNAASDVFKR       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAREILEGSRQSVAISQALAELLATHG+VEEGRGLLQKAMDRLEKAASARSKRSGGGGSP PSAAWA AGDRPKKRSAEEAEDADQGVTALLMAWANFEESRG+EKR+LELMAKAMENEPDNARARVGRARFE+RRGNMRDARIFLSEAANLPQEDGTLFSMWAT        ETALKIAEAATARFPWDKFLLQTMGTVHGKLGRYEEAIECYRRSIALSPAAPAYVAWALVVAKLAERAERNASSKKTAAG + GVVAGDPVVEYVGDASDDGTILGEASDAVAGGS         XXXX   VSRTEEEE GPPSYEEARRLFELG+LADPTHGPLYNAYGSMEAKLGNVEHAR+VYKRGIAARCSGAVHVWQG
Sbjct:  157 EEALTVDPQDGHSWLLLARTREAMGDVNAASDVFKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAREILEGSRQSVAISQALAELLATHGQVEEGRGLLQKAMDRLEKAASARSKRSGGGGSPDPSAAWAAAGDRPKKRSAEEAEDADQGVTALLMAWANFEESRGNEKRSLELMAKAMENEPDNARARVGRARFEMRRGNMRDARIFLSEAANLPQEDGTLFSMWATLEIKEGNLETALKIAEAATARFPWDKFLLQTMGTVHGKLGRYEEAIECYRRSIALSPAAPAYVAWALVVAKLAERAERNASSKKTAAGPKYGVVAGDPVVEYVGDASDDGTILGEASDAVAGGSGGTADENDGXXXXEGGVSRTEEEE-GPPSYEEARRLFELGILADPTHGPLYNAYGSMEAKLGNVEHARNVYKRGIAARCSGAVHVWQG 628
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BLAST of mRNA_Ecto-sp8_S_contig9843.31653.1 vs. uniprot
Match: A0A6H5L0Y9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Y9_9PHAE)

HSP 1 Score: 586 bits (1511), Expect = 1.160e-196
Identity = 354/473 (74.84%), Postives = 363/473 (76.74%), Query Frame = 0 
Query:    1 DKALTVDPQDGHSWLLLARTREAMGDVNAASDVFKRAVAECPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAREILEGSRQSVAISQALAELLATHGEVEEGRGLLQKAMDRLEKAASARSKRSGGGGSPGPSAAWATAGDRPKKRSAEEAEDADQGVTALLMAWANFEESRGDEKRALELMAKAMENEPDNARARVGRARFEIRRGNMRDARIFLSEAANLPQEDGTLFSMWATXXXXXXXXETALKIAEAATARFPWDKFLLQTMGTVHGKLGRYEEAIECYRRSIALSPAAPAYVAWALVVAKLAERAERNASSKKTAAGQEDGVVAGDPVVEYVGDASDDGTILGEASDAVAGGSXXXXXXXXXXXXXXXEVSRTEEEEEGPPSYEEARRLFELGVLADPTHGPLYNAYGSMEAKLGNVEHARSVYKRGIAARCSGAVHVWQG 473
            ++ALTVDPQDGHSWLLLARTREAMGDVNAASDVFKRAV ECPG                                                           +GSRQSVAISQALAELLATHG+VEEGRGLLQKAMDRLEKAASARSKRSGG GSP PSAAWA AGDRPKKRSAEEAED+DQG+TALLMAWANFEESRG+EKRALELMAKAMENEPDNARARVGRAR                                  XXXXXXXX   LKIAEAATARFPWDKFLLQTMGTVHGKLGRYEEAIECYRRSIALSPAAPAYVAWALVVAKLAERAERNASSK+TAAGQE  VVAGDPVVEYVGDASDDGTILGEASDAVAGGS      XXXXXXXXX VSRTEEEE GPPSYEEARRLFELG+LADPTHGPLYNAYGSMEAKLGNVEHARSVYKRGIAARCSGAVHVWQG
Sbjct:  247 EEALTVDPQDGHSWLLLARTREAMGDVNAASDVFKRAVVECPGNAHLWQSWGMLQAKFGDCAKARISFSNGLEADPGRMRYSSPTFLPSYS-----------QGSRQSVAISQALAELLATHGQVEEGRGLLQKAMDRLEKAASARSKRSGGEGSPDPSAAWAAAGDRPKKRSAEEAEDSDQGLTALLMAWANFEESRGNEKRALELMAKAMENEPDNARARVGRARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKIAEAATARFPWDKFLLQTMGTVHGKLGRYEEAIECYRRSIALSPAAPAYVAWALVVAKLAERAERNASSKETAAGQEQDVVAGDPVVEYVGDASDDGTILGEASDAVAGGSGGTAAEXXXXXXXXXGVSRTEEEE-GPPSYEEARRLFELGILADPTHGPLYNAYGSMEAKLGNVEHARSVYKRGIAARCSGAVHVWQG 707
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BLAST of mRNA_Ecto-sp8_S_contig9843.31653.1 vs. uniprot
Match: A0A7S2DH37_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DH37_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 6.320e-14
Identity = 38/57 (66.67%), Postives = 46/57 (80.70%), Query Frame = 0 
Query:  417 EARRLFELGVLADPTHGPLYNAYGSMEAKLGNVEHARSVYKRGIAARCSGAVHVWQG 473
            EARRLFELG+ ADP+HGPLYNAYG+MEA+  N + AR V +RGIAA+C+   HVW G
Sbjct:  322 EARRLFELGIKADPSHGPLYNAYGAMEARHRNFQEARLVLERGIAAKCTDMAHVWHG 378
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BLAST of mRNA_Ecto-sp8_S_contig9843.31653.1 vs. uniprot
Match: A0A835Z4V8_9STRA (PsbB mRNA maturation factor Mbb1, chloroplast n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4V8_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 1.250e-13
Identity = 60/164 (36.59%), Postives = 82/164 (50.00%), Query Frame = 0 
Query:  310 YRRSIALSPAAPAYVAWALVVAKLAERAERNASSKKTAAGQEDGVVAGDPVVEYVGDASDDGTILGEASDAVAGGSXXXXXXXXXXXXXXXEVSRTEEEEEGPPSYEEARRLFELGVLADPTHGPLYNAYGSMEAKLGNVEHARSVYKRGIAARCSGAVHVWQG 473
            YR S  + P APA+VAWAL+  KLA  AER A++                +        DD     +A+DA+   +                    E + +       ARRLFELG+ ADP HGPLYNAYG+ EA+ G+V+ AR+V++RG+AA C+    VW G
Sbjct:  363 YRASTQIRPTAPAFVAWALLEDKLA--AERAAAAXXAT-----------DLTPSPNSKEDD-----DATDAILTSTGKRLGLER--------ARSAEADADVERCRANARRLFELGIRADPKHGPLYNAYGATEARWGDVDAARAVFRRGVAAHCTDMASVWHG 500
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BLAST of mRNA_Ecto-sp8_S_contig9843.31653.1 vs. uniprot
Match: A0A6S8QV48_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8QV48_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 2.110e-8
Identity = 28/50 (56.00%), Postives = 37/50 (74.00%), Query Frame = 0 
Query:  415 YEEARRLFELGVLADPTHGPLYNAYGSMEAKLGNVEHARSVYKRGIAARC 464
            Y +  RLF+  +L DP HGP+YNAYG+ME K+GNVE AR +Y+ G+ A C
Sbjct:  557 YTKIARLFQEALLLDPRHGPVYNAYGNMELKMGNVEEARRIYQNGVYANC 606
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BLAST of mRNA_Ecto-sp8_S_contig9843.31653.1 vs. uniprot
Match: W7TSL7_9STRA (PsbB mRNA maturation factor n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSL7_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 2.670e-8
Identity = 28/47 (59.57%), Postives = 37/47 (78.72%), Query Frame = 0 
Query:  418 ARRLFELGVLADPTHGPLYNAYGSMEAKLGNVEHARSVYKRGIAARC 464
            AR+LF LG+ ADP+HGPLYNAYG ME K+GN+  A+ V++ G+ A C
Sbjct:  511 ARKLFMLGMAADPSHGPLYNAYGRMEEKIGNLTGAQEVFRMGVEAHC 557
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9843.31653.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G1I2_ECTSI4.590e-23391.33PsbB mRNA maturation factor Mbb1, chloroplast n=1 ... [more]
A0A6H5L0Y9_9PHAE1.160e-19674.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2DH37_9STRA6.320e-1466.67Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A835Z4V8_9STRA1.250e-1336.59PsbB mRNA maturation factor Mbb1, chloroplast n=1 ... [more]
A0A6S8QV48_9STRA2.110e-856.00Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
W7TSL7_9STRA2.670e-859.57PsbB mRNA maturation factor n=2 Tax=Monodopsidacea... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003107HAT (Half-A-TPR) repeatSMARTSM00386hat_new_1coord: 447..480
e-value: 4.8
score: 16.1
coord: 482..514
e-value: 1200.0
score: 0.1
coord: 233..265
e-value: 420.0
score: 3.5
coord: 25..57
e-value: 4.7
score: 16.2
coord: 413..445
e-value: 20.0
score: 13.2
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 11..44
e-value: 15.0
score: 13.5
coord: 287..320
e-value: 0.11
score: 21.7
coord: 45..78
e-value: 15.0
score: 13.4
coord: 185..218
e-value: 240.0
score: 2.9
coord: 468..501
e-value: 160.0
score: 4.3
coord: 219..252
e-value: 190.0
score: 3.8
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 468..501
score: 6.461
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 116..149
score: 5.399
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 11..44
score: 7.552
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 45..78
score: 7.346
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 287..320
score: 10.797
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 185..218
score: 7.257
IPR013105Tetratricopeptide repeat 2PFAMPF07719TPR_2coord: 290..319
e-value: 9.9E-6
score: 25.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 392..530
e-value: 2.7E-16
score: 61.6
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 409..496
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 187..324
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 11..143
NoneNo IPR availablePFAMPF13432TPR_16coord: 198..251
e-value: 0.011
score: 16.4
NoneNo IPR availablePANTHERPTHR44917FAMILY NOT NAMEDcoord: 414..527
coord: 2..146
coord: 177..462
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 415..501
score: 9.294
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..320
score: 25.43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9843contigEcto-sp8_S_contig9843:8..7080 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9843.31653.1mRNA_Ecto-sp8_S_contig9843.31653.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9843 8..7080 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9843.31653.1 ID=prot_Ecto-sp8_S_contig9843.31653.1|Name=mRNA_Ecto-sp8_S_contig9843.31653.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=530bp
DKALTVDPQDGHSWLLLARTREAMGDVNAASDVFKRAVAECPGNAHLWQS
WGMLQAKFGDCAKARISFSNGLEADPGNPFVCHAWALMEQRDGDNDRARE
ILEGSRQSVAISQALAELLATHGEVEEGRGLLQKAMDRLEKAASARSKRS
GGGGSPGPSAAWATAGDRPKKRSAEEAEDADQGVTALLMAWANFEESRGD
EKRALELMAKAMENEPDNARARVGRARFEIRRGNMRDARIFLSEAANLPQ
EDGTLFSMWATLEIKEGNLETALKIAEAATARFPWDKFLLQTMGTVHGKL
GRYEEAIECYRRSIALSPAAPAYVAWALVVAKLAERAERNASSKKTAAGQ
EDGVVAGDPVVEYVGDASDDGTILGEASDAVAGGSGGAAAENDGGAAGEG
EVSRTEEEEEGPPSYEEARRLFELGVLADPTHGPLYNAYGSMEAKLGNVE
HARSVYKRGIAARCSGAVHVWQGFGKLEASEGNRDAARKIFARGIRESSE
DVSFLCHSLGSLELAADRLGEARAVFLAGV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003107HAT
IPR019734TPR_repeat
IPR013105TPR_2
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom