mRNA_Ecto-sp8_S_contig9814.31603.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig9814.31603.1 vs. uniprot
Match: A0A6H5JF91_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JF91_9PHAE) HSP 1 Score: 261 bits (666), Expect = 1.220e-83 Identity = 129/131 (98.47%), Postives = 130/131 (99.24%), Query Frame = 1
Query: 1 KLSSSAAVEIEQELNDMGARRKELSKKNVRDRHYDAGALLLGLGTFAAIEGPVNTYLRAQKLFPGPHLYAGAAVVVAWAVAASLVPKMQKGDDTARIAHMAINFGMIALFAWQIFTGIPIAQKVWEFTKFP 393
KLSSSAAVEIEQELNDMGARRKELSKKNVRD HYDAGALLLGLGTFAA+EGPVNTYLRAQKLFPGPHLYAGAAVVVAWAVAASLVPKMQKGDDTARIAHMAINFGMIALFAWQIFTGIPIAQKVWEFTKFP
Sbjct: 216 KLSSSAAVEIEQELNDMGARRKELSKKNVRDLHYDAGALLLGLGTFAAVEGPVNTYLRAQKLFPGPHLYAGAAVVVAWAVAASLVPKMQKGDDTARIAHMAINFGMIALFAWQIFTGIPIAQKVWEFTKFP 346
BLAST of mRNA_Ecto-sp8_S_contig9814.31603.1 vs. uniprot
Match: A0A835YJX9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJX9_9STRA) HSP 1 Score: 178 bits (451), Expect = 4.430e-52 Identity = 85/131 (64.89%), Postives = 108/131 (82.44%), Query Frame = 1
Query: 1 KLSSSAAVEIEQELNDMGARRKELSKKNVRDRHYDAGALLLGLGTFAAIEGPVNTYLRAQKLFPGPHLYAGAAVVVAWAVAASLVPKMQKGDDTARIAHMAINFGMIALFAWQIFTGIPIAQKVWEFTKFP 393
KLS++AAV+ +E + RRK LSKK+VRD+HY+ G+L+LGLG FAAIEGPVNTY+RA KLFPGPHLYAGA +VVAW +AASLV +MQKG++ AR+AH+ INFG++ FAWQ+ TG+ I KV EFTK+P
Sbjct: 149 KLSAAAAVD--EEYAALQERRKALSKKDVRDKHYEVGSLILGLGVFAAIEGPVNTYIRAGKLFPGPHLYAGAGIVVAWGIAASLVQQMQKGNEWARLAHIGINFGILGFFAWQVNTGLGITAKVLEFTKWP 277
BLAST of mRNA_Ecto-sp8_S_contig9814.31603.1 vs. uniprot
Match: A0A7S3TGQ0_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3TGQ0_9SPIT) HSP 1 Score: 163 bits (412), Expect = 3.110e-46 Identity = 75/122 (61.48%), Postives = 97/122 (79.51%), Query Frame = 1
Query: 28 IEQELNDMGARRKELSKKNVRDRHYDAGALLLGLGTFAAIEGPVNTYLRAQKLFPGPHLYAGAAVVVAWAVAASLVPKMQKGDDTARIAHMAINFGMIALFAWQIFTGIPIAQKVWEFTKFP 393
++ +++++ A RK+L+ N+R++HY G+++LGLGT AIEGPVNT+LRAQKLFPGPHLYAGA VVV WA+AASLVP MQKG D+AR H+A N +ALF WQ+ TG I QKV +FTKFP
Sbjct: 154 LQSQIDELSATRKDLASNNLREKHYQVGSVILGLGTAFAIEGPVNTFLRAQKLFPGPHLYAGAGVVVCWAMAASLVPLMQKGKDSARSEHIAFNAIAVALFTWQVPTGWEITQKVIQFTKFP 275
BLAST of mRNA_Ecto-sp8_S_contig9814.31603.1 vs. uniprot
Match: A0A7S3QGW5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QGW5_9STRA) HSP 1 Score: 162 bits (411), Expect = 6.930e-46 Identity = 78/126 (61.90%), Postives = 97/126 (76.98%), Query Frame = 1
Query: 16 AAVEIEQELNDMGARRKELSKKNVRDRHYDAGALLLGLGTFAAIEGPVNTYLRAQKLFPGPHLYAGAAVVVAWAVAASLVPKMQKGDDTARIAHMAINFGMIALFAWQIFTGIPIAQKVWEFTKFP 393
AA+ I+ +++++ A RKELS KN+RD H+ G+LL +GT AIEGP+NTY RA KLFPGPHLYAGA +VV WA AA+ VP MQKG+DTAR H+A N + LFAWQI TGIPI QKV +FTK+P
Sbjct: 168 AAMPIQIQIDELNAERKELSSKNLRDNHFAQGSLLAFIGTAFAIEGPLNTYARAGKLFPGPHLYAGAGLVVLWAAAAACVPAMQKGNDTARSLHIAFNVSGMGLFAWQITTGIPILQKVVQFTKWP 293
BLAST of mRNA_Ecto-sp8_S_contig9814.31603.1 vs. uniprot
Match: I0Z2R7_COCSC (Uncharacterized protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z2R7_COCSC) HSP 1 Score: 159 bits (403), Expect = 1.110e-45 Identity = 75/122 (61.48%), Postives = 94/122 (77.05%), Query Frame = 1
Query: 28 IEQELNDMGARRKELSKKNVRDRHYDAGALLLGLGTFAAIEGPVNTYLRAQKLFPGPHLYAGAAVVVAWAVAASLVPKMQKGDDTARIAHMAINFGMIALFAWQIFTGIPIAQKVWEFTKFP 393
+EQ++ ++ RK L+K RD+H++ G+LLLGLG AIEGPVNTYLR KLFPGPHLYAGAA+VV WA A++LVP MQKG+DTAR H+A+N +ALFAWQ+ TG I QKVWEF +P
Sbjct: 90 LEQQIAELEETRKVLTKGGYRDKHWNWGSLLLGLGVLIAIEGPVNTYLRTGKLFPGPHLYAGAAIVVLWASASALVPSMQKGNDTARNTHIALNTLNLALFAWQVPTGFEIVQKVWEFAPWP 211
BLAST of mRNA_Ecto-sp8_S_contig9814.31603.1 vs. uniprot
Match: A0A8J9WRZ6_9CHLO (Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WRZ6_9CHLO) HSP 1 Score: 160 bits (405), Expect = 3.050e-45 Identity = 75/122 (61.48%), Postives = 93/122 (76.23%), Query Frame = 1
Query: 28 IEQELNDMGARRKELSKKNVRDRHYDAGALLLGLGTFAAIEGPVNTYLRAQKLFPGPHLYAGAAVVVAWAVAASLVPKMQKGDDTARIAHMAINFGMIALFAWQIFTGIPIAQKVWEFTKFP 393
++Q++ ++ RK L+K RD+H++ G+LLLGLG AIEGP NTYLR KLFPGPHLYAGAA+VV WA AASLVP MQKG+DTAR H+A+N +ALFAWQ+ TG I QKVWEF +P
Sbjct: 150 LDQQIAELEETRKALTKGGFRDKHWNWGSLLLGLGVLIAIEGPANTYLRTGKLFPGPHLYAGAAIVVLWAAAASLVPAMQKGNDTARNTHIALNAVNLALFAWQVPTGFEIVQKVWEFAPWP 271
BLAST of mRNA_Ecto-sp8_S_contig9814.31603.1 vs. uniprot
Match: A0A7S0P6S8_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0P6S8_9EUKA) HSP 1 Score: 158 bits (400), Expect = 2.300e-44 Identity = 74/122 (60.66%), Postives = 95/122 (77.87%), Query Frame = 1
Query: 28 IEQELNDMGARRKELSKKNVRDRHYDAGALLLGLGTFAAIEGPVNTYLRAQKLFPGPHLYAGAAVVVAWAVAASLVPKMQKGDDTARIAHMAINFGMIALFAWQIFTGIPIAQKVWEFTKFP 393
+++++ + A RKEL+ +RD+HY G+++LGLGT AIEGPVNT+LRAQKLFPGPHLYAGA VVV+WA+AASLVP M KG ++ARIAH+A N + LF WQ+ TG I KV +FTKFP
Sbjct: 161 LQEQIESLSASRKELASAGLRDKHYQVGSVILGLGTSFAIEGPVNTFLRAQKLFPGPHLYAGAGVVVSWAMAASLVPLMSKGKESARIAHIAFNSLALGLFTWQLPTGWEITLKVIKFTKFP 282
BLAST of mRNA_Ecto-sp8_S_contig9814.31603.1 vs. uniprot
Match: K0SPQ1_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SPQ1_THAOC) HSP 1 Score: 159 bits (401), Expect = 2.410e-44 Identity = 78/126 (61.90%), Postives = 93/126 (73.81%), Query Frame = 1
Query: 16 AAVEIEQELNDMGARRKELSKKNVRDRHYDAGALLLGLGTFAAIEGPVNTYLRAQKLFPGPHLYAGAAVVVAWAVAASLVPKMQKGDDTARIAHMAINFGMIALFAWQIFTGIPIAQKVWEFTKFP 393
AA IE E+N + RK+L+ RD+H++ G+ LL LGTF AIEGP+NTY RA KLFPGPHLYAGA VV WA+AAS VP MQKGDDTAR AH+ N + LFAWQI +GIPI KV +FTK+P
Sbjct: 172 AATTIENEINALTQERKDLAANGPRDKHFNQGSTLLFLGTFFAIEGPLNTYARAGKLFPGPHLYAGAGCVVLWALAASCVPAMQKGDDTARTAHIGANILGLGLFAWQIQSGIPILLKVIQFTKWP 297
BLAST of mRNA_Ecto-sp8_S_contig9814.31603.1 vs. uniprot
Match: A0A7S1YEF5_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YEF5_9STRA) HSP 1 Score: 158 bits (400), Expect = 3.580e-44 Identity = 77/126 (61.11%), Postives = 93/126 (73.81%), Query Frame = 1
Query: 16 AAVEIEQELNDMGARRKELSKKNVRDRHYDAGALLLGLGTFAAIEGPVNTYLRAQKLFPGPHLYAGAAVVVAWAVAASLVPKMQKGDDTARIAHMAINFGMIALFAWQIFTGIPIAQKVWEFTKFP 393
A +E E+ + D+GA RKEL+K RD+H+ G+LL LGT AIEGP+NTY RA KLFPGPHLYAGA +VVAWA+AA+ VP MQKG DTAR H+ N IALF WQ+ +GIPI KV E TK+P
Sbjct: 174 AGLETEKTIKDLGAERKELAKAGPRDKHFSQGSLLALLGTAFAIEGPLNTYARAGKLFPGPHLYAGAGLVVAWALAAACVPSMQKGSDTARTVHIGANVIGIALFVWQVTSGIPILLKVVELTKWP 299
BLAST of mRNA_Ecto-sp8_S_contig9814.31603.1 vs. uniprot
Match: A0A0G4H6Z3_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4H6Z3_VITBC) HSP 1 Score: 158 bits (399), Expect = 1.200e-43 Identity = 77/126 (61.11%), Postives = 95/126 (75.40%), Query Frame = 1
Query: 16 AAVEIEQELNDMGARRKELSKKNVRDRHYDAGALLLGLGTFAAIEGPVNTYLRAQKLFPGPHLYAGAAVVVAWAVAASLVPKMQKGDDTARIAHMAINFGMIALFAWQIFTGIPIAQKVWEFTKFP 393
AAV + ++ + A RKEL K + RD+H+ G++LLGLG AIEGPVNTYLR KLFPGPHLY GAA+ V WA+AA+LVP MQKG+DTARIAH+++N ALF WQI TG+ I QK EFT+FP
Sbjct: 209 AAVPLGDKIEALSATRKELVKGDFRDKHWTVGSVLLGLGVTFAIEGPVNTYLRTGKLFPGPHLYCGAAITVMWALAAALVPAMQKGNDTARIAHISLNATGAALFLWQINTGLGIWQKTLEFTQFP 334 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9814.31603.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig9814.31603.1 >prot_Ecto-sp8_S_contig9814.31603.1 ID=prot_Ecto-sp8_S_contig9814.31603.1|Name=mRNA_Ecto-sp8_S_contig9814.31603.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=116bp MGARRKELSKKNVRDRHYDAGALLLGLGTFAAIEGPVNTYLRAQKLFPGPback to top mRNA from alignment at Ecto-sp8_S_contig9814:4073..7090- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig9814.31603.1 ID=mRNA_Ecto-sp8_S_contig9814.31603.1|Name=mRNA_Ecto-sp8_S_contig9814.31603.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=3018bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9814:4073..7090- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig9814:4073..7090- >mRNA_Ecto-sp8_S_contig9814.31603.1 ID=mRNA_Ecto-sp8_S_contig9814.31603.1|Name=mRNA_Ecto-sp8_S_contig9814.31603.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=348bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9814:4073..7090- (Ectocarpus species8 EcLAC_412)back to top |