prot_Ecto-sp8_S_contig9780.31550.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9780.31550.1
Unique Nameprot_Ecto-sp8_S_contig9780.31550.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length606
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9780.31550.1 vs. uniprot
Match: A0A6H5L576_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L576_9PHAE)

HSP 1 Score: 867 bits (2241), Expect = 1.410e-311
Identity = 505/655 (77.10%), Postives = 520/655 (79.39%), Query Frame = 0 
Query:    1 MSSAWTKGDRRAKKQLEKSLISDQDDHVTRFALVRLLASKADPAAAEELLRGPGVEDRLLADPNTRVAMLSSLGGAYLILWRARGETTSGSTGSRAGGGQGKDTREGVEIRLDVSSERTDLLHRAQHFLEEALMAPENLNDPAIRAQV-------------------------------------------AFCKEARGDCKEALALYASIISDSALSPGASAVIFRTSVLLAYVGRFDECVRYLEFIEGQPPKGCSMLLVQAILYTCYVSLGLEMKASRRLITLREAYNDEYTAGRIGGGFSRDEIPWDRLPGWFYMWRELGVKSLRAGDYYAGIQMFSQATLQREDPETMVCTAEMLWVLGEPKRALALCERAYAADPLHIGAQRRLSGWAPKKWKDRIVKEEERREAITEMRRLADLSDRKTDAMLARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERSSS-------FASSLSAREQLERSVDEKSSASSAXXXXXXXXXSAAEAAEAGRSNFSACFRAETERAMRRKRETNEHHREMPMDMASVKVAAEAIHEAMRGGGWKTATNGARSGFATHEMRALARFQWHRKTHEAKITKVVYGS 605
            MS AWTKGD RAKKQLEKSL SDQDDHVTRFALVRLLASKA+PAAAEELLRGPGVEDRLLADPNTRVAMLSSLGGAYL+LWRARGETTS STGSRAGGGQGKDTRE VEIRLDVSSERTDLLHRAQHFLEEALM+PENLNDPAIRAQV                                           AFCKEARGD KEAL LYASIISDSALSPGASAVIFRTSVLLAYVGR DECVRYLEFIEGQPPKGCSMLLVQA+LYTCYVSLGLE+K SRRLITLREAYNDEYTAGR+G GFSRDEIPWDRLPGWFYMWRELGV+S+RAG+YYAGIQMFSQATLQR+DPETMVCTAEMLWVLGEPKRALALCERAYAADPLHIGAQRRLSGWAP+KWK+RIVKEEERREAITEMRRLADLSD+K DAMLAR                                    XXXXXXXXXXXXX                   XXXXXXXXXX            FASSLSA+EQ+ERSVDEKSSASSA         SAAEAAEAGRSNFSACFRAETERAMRRKRE  EHH EMPMDMASVKVAAEAIHEAMRGGGWKT TNGARSGFATHEMRALARFQ HRKTHEAKITKVVYGS
Sbjct:    1 MSLAWTKGDWRAKKQLEKSLSSDQDDHVTRFALVRLLASKAEPAAAEELLRGPGVEDRLLADPNTRVAMLSSLGGAYLMLWRARGETTSESTGSRAGGGQGKDTREVVEIRLDVSSERTDLLHRAQHFLEEALMSPENLNDPAIRAQVGERGKWKSVLRLPGLARLPPSRLSLFRPDIRSLLHPDCCAFKKAFCKEARGDYKEALTLYASIISDSALSPGASAVIFRTSVLLAYVGRLDECVRYLEFIEGQPPKGCSMLLVQALLYTCYVSLGLEVKVSRRLITLREAYNDEYTAGRMGRGFSRDEIPWDRLPGWFYMWRELGVESIRAGNYYAGIQMFSQATLQRQDPETMVCTAEMLWVLGEPKRALALCERAYAADPLHIGAQRRLSGWAPQKWKERIVKEEERREAITEMRRLADLSDKKADAMLARRRRREKARFLRAWRRLHDKHKHRRSTSTEGEEAQTGXXXXXXXXXXXXXGSDKFSWSDSSSSRSGSSSXXXXXXXXXXXXXXXXXXXXXXFASSLSAKEQVERSVDEKSSASSAPVPEPFPVPSAAEAAEAGRSNFSACFRAETERAMRRKREATEHHGEMPMDMASVKVAAEAIHEAMRGGGWKTGTNGARSGFATHEMRALARFQCHRKTHEAKITKVVYGS 655
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9780.31550.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L576_9PHAE1.410e-31177.10Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 273..420
e-value: 5.9E-6
score: 27.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 9..209
e-value: 1.0E-5
score: 27.4
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 267..346

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9780contigEcto-sp8_S_contig9780:317..4897 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9780.31550.1mRNA_Ecto-sp8_S_contig9780.31550.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9780 317..4897 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9780.31550.1 ID=prot_Ecto-sp8_S_contig9780.31550.1|Name=mRNA_Ecto-sp8_S_contig9780.31550.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=606bp
MSSAWTKGDRRAKKQLEKSLISDQDDHVTRFALVRLLASKADPAAAEELL
RGPGVEDRLLADPNTRVAMLSSLGGAYLILWRARGETTSGSTGSRAGGGQ
GKDTREGVEIRLDVSSERTDLLHRAQHFLEEALMAPENLNDPAIRAQVAF
CKEARGDCKEALALYASIISDSALSPGASAVIFRTSVLLAYVGRFDECVR
YLEFIEGQPPKGCSMLLVQAILYTCYVSLGLEMKASRRLITLREAYNDEY
TAGRIGGGFSRDEIPWDRLPGWFYMWRELGVKSLRAGDYYAGIQMFSQAT
LQREDPETMVCTAEMLWVLGEPKRALALCERAYAADPLHIGAQRRLSGWA
PKKWKDRIVKEEERREAITEMRRLADLSDRKTDAMLARRRRREKARLLLA
WRHLHEKRKHRRRTSTEDEEARGGRRRRDDTTTXXXXSDSTSSRSGSSSS
SGSARSSRSGGGSSRSERSSSFASSLSAREQLERSVDEKSSASSAPAPEP
FPVPSAAEAAEAGRSNFSACFRAETERAMRRKRETNEHHREMPMDMASVK
VAAEAIHEAMRGGGWKTATNGARSGFATHEMRALARFQWHRKTHEAKITK
VVYGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf