prot_Ecto-sp8_S_contig9762.31521.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9762.31521.1
Unique Nameprot_Ecto-sp8_S_contig9762.31521.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length228
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9762.31521.1 vs. uniprot
Match: D8LPJ8_ECTSI (EsV-1-179 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPJ8_ECTSI)

HSP 1 Score: 407 bits (1045), Expect = 1.480e-142
Identity = 188/226 (83.19%), Postives = 200/226 (88.50%), Query Frame = 0 
Query:    4 KTIPVPL--SGTRSRWLAMAFHKPCKFPITHYEGEYRPTWTQRWTRIGGENGSWQFFSHARDITPDNDGEPYTWEGEYGWYNLIRPMLAGPSNDWGAFDLAGLLQIDQSGEFIKACGCASLEENDLRFFVRAGITVGKHRNDRGIDHFCMTPDVFCIPGTGGKIDLTLVTTNKTIGKTLVEVYFLRGRETAEVRSRLPGMRKFYRAKRINKCFANIVNLFGGACGD 227
            K  P PL   GTRSRWL+MAFHKPCKFPIT YEGEYRPTWT+RWT IGG+NGSWQFFSHAR I PDN+GE YTWEGEYGW+NL+RPMLAGPSNDWGAFDLAGLLQI+QSGE IKACGC SL+ NDLR+F+RAGITVG H  DRGID+ CMTP VFCIPGTGGK DLTLVTTNKTIGKTLVEVYFL GRETAEVRSRLPGM KFYR  R+ KCFAN VNLFGGACGD
Sbjct:   16 KQYPFPLVTHGTRSRWLSMAFHKPCKFPITRYEGEYRPTWTRRWTTIGGKNGSWQFFSHARAILPDNNGESYTWEGEYGWFNLMRPMLAGPSNDWGAFDLAGLLQINQSGELIKACGCVSLKANDLRYFIRAGITVGAHCIDRGIDNLCMTPAVFCIPGTGGKFDLTLVTTNKTIGKTLVEVYFLCGRETAEVRSRLPGMHKFYRRARLKKCFANFVNLFGGACGD 241
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9762.31521.1 vs. uniprot
Match: Q8QNA8_ESV1K (EsV-1-179 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNA8_ESV1K)

HSP 1 Score: 392 bits (1006), Expect = 7.860e-137
Identity = 182/226 (80.53%), Postives = 193/226 (85.40%), Query Frame = 0 
Query:    2 LRKTIPVPLSGTRSRWLAMAFHKPCKFPITHYEGEYRPTWTQRWTRIGGENGSWQFFSHARDITPDNDGEPYTWEGEYGWYNLIRPMLAGPSNDWGAFDLAGLLQIDQSGEFIKACGCASLEENDLRFFVRAGITVGKHRNDRGIDHFCMTPDVFCIPGTGGKIDLTLVTTNKTIGKTLVEVYFLRGRETAEVRSRLPGMRKFYRAKRINKCFANIVNLFGGACGD 227
            L K    P     S WLAMA HKPCKFPIT YEGEYRPTWTQRWTRIGGE+GSWQFFSHARDITPD+DGEPYTWEGE+GWYNLIRPMLAGPSNDWGAFDLAGLLQI+Q GE IKACG  SL++NDL FF+RAGITVG +R D GID+ CMTP VFCIPG GGK DLTLVTTNK+IGKTLVEVYFL GRETAEVRSRLPGM KFYRA RI KCFA    +FGGACGD
Sbjct:    2 LTKNNTRPSRRMHSLWLAMARHKPCKFPITRYEGEYRPTWTQRWTRIGGESGSWQFFSHARDITPDDDGEPYTWEGEFGWYNLIRPMLAGPSNDWGAFDLAGLLQINQRGELIKACGWVSLKKNDLMFFIRAGITVGAYRKDHGIDNLCMTPAVFCIPGAGGKFDLTLVTTNKSIGKTLVEVYFLCGRETAEVRSRLPGMHKFYRAARIKKCFAYTAKIFGGACGD 227
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9762.31521.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LPJ8_ECTSI1.480e-14283.19EsV-1-179 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
Q8QNA8_ESV1K7.860e-13780.53EsV-1-179 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9762contigEcto-sp8_S_contig9762:5615..6298 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9762.31521.1mRNA_Ecto-sp8_S_contig9762.31521.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9762 5615..6298 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9762.31521.1 ID=prot_Ecto-sp8_S_contig9762.31521.1|Name=mRNA_Ecto-sp8_S_contig9762.31521.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=228bp
CLRKTIPVPLSGTRSRWLAMAFHKPCKFPITHYEGEYRPTWTQRWTRIGG
ENGSWQFFSHARDITPDNDGEPYTWEGEYGWYNLIRPMLAGPSNDWGAFD
LAGLLQIDQSGEFIKACGCASLEENDLRFFVRAGITVGKHRNDRGIDHFC
MTPDVFCIPGTGGKIDLTLVTTNKTIGKTLVEVYFLRGRETAEVRSRLPG
MRKFYRAKRINKCFANIVNLFGGACGD*
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