prot_Ecto-sp8_S_contig96749.31378.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig96749.31378.1
Unique Nameprot_Ecto-sp8_S_contig96749.31378.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length34
Homology
BLAST of mRNA_Ecto-sp8_S_contig96749.31378.1 vs. uniprot
Match: A0A6H5JWU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWU4_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 6.530e-14
Identity = 32/33 (96.97%), Postives = 33/33 (100.00%), Query Frame = 0
Query:    2 KDEEVFVSSSCFTGAKDGYVFKTGDKGLGFYVD 34
            KDEEVF+SSSCFTGAKDGYVFKTGDKGLGFYVD
Sbjct:  172 KDEEVFISSSCFTGAKDGYVFKTGDKGLGFYVD 204          
BLAST of mRNA_Ecto-sp8_S_contig96749.31378.1 vs. uniprot
Match: D7G599_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G599_ECTSI)

HSP 1 Score: 70.1 bits (170), Expect = 4.250e-13
Identity = 32/33 (96.97%), Postives = 32/33 (96.97%), Query Frame = 0
Query:    2 KDEEVFVSSSCFTGAKDGYVFKTGDKGLGFYVD 34
            KDE VFVSSSCFTGAKDGYVFKTGDKGLGFYVD
Sbjct:  173 KDEGVFVSSSCFTGAKDGYVFKTGDKGLGFYVD 205          
BLAST of mRNA_Ecto-sp8_S_contig96749.31378.1 vs. uniprot
Match: A0A7S3U447_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3U447_9SPIT)

HSP 1 Score: 47.0 bits (110), Expect = 1.150e-5
Identity = 19/29 (65.52%), Postives = 24/29 (82.76%), Query Frame = 0
Query:    6 VFVSSSCFTGAKDGYVFKTGDKGLGFYVD 34
            +FV +  F GAK+GYVFK GDKGLG+Y+D
Sbjct:   17 IFVPAHAFGGAKEGYVFKKGDKGLGYYLD 45          
BLAST of mRNA_Ecto-sp8_S_contig96749.31378.1 vs. uniprot
Match: A0A7S0LXE6_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LXE6_9CRYP)

HSP 1 Score: 46.2 bits (108), Expect = 3.230e-5
Identity = 19/32 (59.38%), Postives = 26/32 (81.25%), Query Frame = 0
Query:    3 DEEVFVSSSCFTGAKDGYVFKTGDKGLGFYVD 34
            D+E F+ S  F+G+KDGYVFK G +GLG+Y+D
Sbjct:   49 DKEEFLPSEEFSGSKDGYVFKMGGRGLGYYLD 80          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig96749.31378.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JWU4_9PHAE6.530e-1496.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G599_ECTSI4.250e-1396.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3U447_9SPIT1.150e-565.52Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
A0A7S0LXE6_9CRYP3.230e-559.38Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig96749contigEcto-sp8_S_contig96749:376..477 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig96749.31378.1mRNA_Ecto-sp8_S_contig96749.31378.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig96749 376..477 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig96749.31378.1 ID=prot_Ecto-sp8_S_contig96749.31378.1|Name=mRNA_Ecto-sp8_S_contig96749.31378.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=34bp
RKDEEVFVSSSCFTGAKDGYVFKTGDKGLGFYVD
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