prot_Ecto-sp8_S_contig9519.31110.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9519.31110.1
Unique Nameprot_Ecto-sp8_S_contig9519.31110.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length311
Homology
BLAST of mRNA_Ecto-sp8_S_contig9519.31110.1 vs. uniprot
Match: A0A6H5KYP0_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYP0_9PHAE)

HSP 1 Score: 515 bits (1326), Expect = 4.410e-177
Identity = 281/312 (90.06%), Postives = 285/312 (91.35%), Query Frame = 0
Query:    1 MCAICLVEYETGDELRIIPGCGHRFHKECIDPWLETKAVCAYCKANVEARRTCCDRIYRSVSDRLGINLVAPTTIRFSSSRRTYTNEDVQLAMGPTLPASYGHSEMDYVGSAVAPRQASVDVEAGEGGEAEATTPVTAAAAPGQAFGGGGPAGSDSTRSIRGAIVLPDQGGQPHEGSIVVQPASAPSYVVVPREYSLGGDGIDEDHPGNGGEGPAGSSTRELASSSARASTTEGLPDDVARATDATEEKEEIVAEAAEERRGSHKGFSDGRGGVVFGGNTEEFREAAAXXXXXXXXXXXTAAG--GGAGPRL 310
            MCAICLVEYETGDELRIIPGCGHRFHKECIDPWLETKAVCAYCKANVEARRTCCDRIYRSVS+RLGINLVAPTTIRFSSSRRTYTNEDVQLAMGPTLPASYGHSEMDYVGSAVAPRQASVDVEAGEG EAEATTP+TA AAPGQAFGGGGPA S STRS RGAIVLPDQGGQP EGSIVVQPASAPSYVVVPREYSLGG GID +HPGNGGEGP GSS REL SSSARAS TE  PD+VARATDATEEKEEIVAEA EERRGS KGFSDGRGGVVFGGNTEEFREA AXXXXXX       A   GGAGPRL
Sbjct:  388 MCAICLVEYETGDELRIIPGCGHRFHKECIDPWLETKAVCAYCKANVEARRTCCDRIYRSVSNRLGINLVAPTTIRFSSSRRTYTNEDVQLAMGPTLPASYGHSEMDYVGSAVAPRQASVDVEAGEGVEAEATTPITADAAPGQAFGGGGPARSGSTRSTRGAIVLPDQGGQPQEGSIVVQPASAPSYVVVPREYSLGG-GIDNEHPGNGGEGPVGSSMRELTSSSARASATERPPDEVARATDATEEKEEIVAEAPEERRGSQKGFSDGRGGVVFGGNTEEFREAEAXXXXXXMAGARNGAAAIGGAGPRL 698          
BLAST of mRNA_Ecto-sp8_S_contig9519.31110.1 vs. uniprot
Match: D8LEX7_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEX7_ECTSI)

HSP 1 Score: 502 bits (1293), Expect = 7.700e-175
Identity = 281/311 (90.35%), Postives = 287/311 (92.28%), Query Frame = 0
Query:    1 MCAICLVEYETGDELRIIPGCGHRFHKECIDPWLETKAVCAYCKANVEARRTCCDRIYRSVSDRLGINLVAPTTIRFSSSRRTYTNEDVQLAMGPTLPASYGHSEMDYVGSAVAPRQASVDVEAGEGGEAEATTPVTAAAAPGQA-FGGGGPAGSDSTRSIRGAIVLPDQGGQPHEGSIVVQPASAPSYVVVPREYSLGGDGIDEDHPGNGGEGPAGSSTRELASSSARASTTEGLPDDVARATDATEEKEEIVAEAAEERRGSHKGFSDGRGGVVFGGNTEEFREAAAXXXXXXXXXXXTAAGGGAGPRL 310
            MCAICLVEYETGDELRIIPGCGHRFHKECIDPWLETKAVCAYCKANVEARRTCCDR+YRSVSDRLGINLVAPTTIRFSSSRRTYTNEDVQLAMGPTLPASYGHSEMDYVGSAVAPRQASVDVEAGEGGEAEA              F    PAGS STRS RGAIVLPDQGGQP +GSIVVQPASAPSYVVVPREYSLGGDGIDE++PGNGGEG AGSSTRELASS+ARASTTEGLPDDVA+ATDATEEKEEIVAEAAEERRGSHKGFSDGRGGVVFGGNTEEFREAAAXXXXXXXXXXX AA GGAGPRL
Sbjct:  195 MCAICLVEYETGDELRIIPGCGHRFHKECIDPWLETKAVCAYCKANVEARRTCCDRVYRSVSDRLGINLVAPTTIRFSSSRRTYTNEDVQLAMGPTLPASYGHSEMDYVGSAVAPRQASVDVEAGEGGEAEAXXXXXXXXXXXXXXFXXXXPAGSGSTRSTRGAIVLPDQGGQP-QGSIVVQPASAPSYVVVPREYSLGGDGIDEEYPGNGGEGLAGSSTRELASSAARASTTEGLPDDVAQATDATEEKEEIVAEAAEERRGSHKGFSDGRGGVVFGGNTEEFREAAAXXXXXXXXXXXXAASGGAGPRL 504          
BLAST of mRNA_Ecto-sp8_S_contig9519.31110.1 vs. uniprot
Match: A0A8J5S5L1_ZIZPA (RING-type domain-containing protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5S5L1_ZIZPA)

HSP 1 Score: 79.7 bits (195), Expect = 3.750e-13
Identity = 29/47 (61.70%), Postives = 38/47 (80.85%), Query Frame = 0
Query:    2 CAICLVEYETGDELRIIPGCGHRFHKECIDPWLETKAVCAYCKANVE 48
            CA+CL+E+E GD+LR++P C H FH ECIDPWLET+  C  C+AN+E
Sbjct:  128 CAVCLMEFEDGDDLRLLPHCSHAFHPECIDPWLETRVTCPLCRANLE 174          
BLAST of mRNA_Ecto-sp8_S_contig9519.31110.1 vs. uniprot
Match: A0A835ZK41_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK41_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 6.860e-13
Identity = 29/47 (61.70%), Postives = 38/47 (80.85%), Query Frame = 0
Query:    1 MCAICLVEYETGDELRIIPGCGHRFHKECIDPWLETKAVCAYCKANV 47
            MCAICL ++E GD+LR++P C H++HK C+DPWLETKA+C  CK  V
Sbjct:  250 MCAICLADFEGGDQLRVVPHCFHQYHKACLDPWLETKAICPLCKQRV 296          
BLAST of mRNA_Ecto-sp8_S_contig9519.31110.1 vs. uniprot
Match: A0A0P0YC54_ORYSJ (Os12g0620100 protein n=4 Tax=Oryza TaxID=4527 RepID=A0A0P0YC54_ORYSJ)

HSP 1 Score: 73.6 bits (179), Expect = 2.630e-12
Identity = 27/49 (55.10%), Postives = 35/49 (71.43%), Query Frame = 0
Query:    2 CAICLVEYETGDELRIIPGCGHRFHKECIDPWLETKAVCAYCKANVEAR 50
            CA+CL EYE GDELR +PGCGH FH+ C+D WL  +  C  C+++  AR
Sbjct:   92 CAVCLAEYEDGDELRRLPGCGHAFHRRCVDEWLRRRPTCPVCRSSPPAR 140          
BLAST of mRNA_Ecto-sp8_S_contig9519.31110.1 vs. uniprot
Match: A0A3B6MIZ0_WHEAT (RING-type domain-containing protein n=2 Tax=Triticum aestivum TaxID=4565 RepID=A0A3B6MIZ0_WHEAT)

HSP 1 Score: 71.2 bits (173), Expect = 2.020e-11
Identity = 25/49 (51.02%), Postives = 35/49 (71.43%), Query Frame = 0
Query:    2 CAICLVEYETGDELRIIPGCGHRFHKECIDPWLETKAVCAYCKANVEAR 50
            CA+CL EY  GDELR++PGC H FH+ C+D WL  +  C  C+A+ ++R
Sbjct:   94 CAVCLAEYADGDELRVMPGCAHTFHRRCVDQWLRRRPSCPLCRASSQSR 142          
BLAST of mRNA_Ecto-sp8_S_contig9519.31110.1 vs. uniprot
Match: A0A6N2B2F2_SOLCI (RING-type domain-containing protein n=4 Tax=Solanum TaxID=4107 RepID=A0A6N2B2F2_SOLCI)

HSP 1 Score: 71.6 bits (174), Expect = 2.240e-11
Identity = 28/53 (52.83%), Postives = 36/53 (67.92%), Query Frame = 0
Query:    2 CAICLVEYETGDELRIIPGCGHRFHKECIDPWLETKAVCAYCKANVEARRTCC 54
            CAICLVEY  GDE+R++P CGHRFH +C+D WL T + C  C+  +   R  C
Sbjct:  103 CAICLVEYVEGDEIRVLPNCGHRFHLQCVDTWLLTNSSCPSCRQILVVARARC 155          
BLAST of mRNA_Ecto-sp8_S_contig9519.31110.1 vs. uniprot
Match: A0A0E0RK53_ORYRU (Uncharacterized protein n=7 Tax=Oryza TaxID=4527 RepID=A0A0E0RK53_ORYRU)

HSP 1 Score: 73.6 bits (179), Expect = 2.570e-11
Identity = 27/49 (55.10%), Postives = 35/49 (71.43%), Query Frame = 0
Query:    2 CAICLVEYETGDELRIIPGCGHRFHKECIDPWLETKAVCAYCKANVEAR 50
            CA+CL EYE GDELR +PGCGH FH+ C+D WL  +  C  C+++  AR
Sbjct:   81 CAVCLAEYEDGDELRRLPGCGHAFHRRCVDEWLRRRPTCPVCRSSPPAR 129          
BLAST of mRNA_Ecto-sp8_S_contig9519.31110.1 vs. uniprot
Match: A0A0E0MPQ0_ORYPU (Uncharacterized protein n=1 Tax=Oryza punctata TaxID=4537 RepID=A0A0E0MPQ0_ORYPU)

HSP 1 Score: 73.6 bits (179), Expect = 3.260e-11
Identity = 27/49 (55.10%), Postives = 35/49 (71.43%), Query Frame = 0
Query:    2 CAICLVEYETGDELRIIPGCGHRFHKECIDPWLETKAVCAYCKANVEAR 50
            CA+CL EYE GDELR +PGCGH FH+ C+D WL  +  C  C+++  AR
Sbjct:   93 CAVCLAEYEDGDELRPLPGCGHAFHRRCVDEWLRRRPTCPVCRSSPPAR 141          
BLAST of mRNA_Ecto-sp8_S_contig9519.31110.1 vs. uniprot
Match: A0A8I6WLA5_HORVV (RING-type domain-containing protein n=1 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=A0A8I6WLA5_HORVV)

HSP 1 Score: 70.1 bits (170), Expect = 4.150e-11
Identity = 24/49 (48.98%), Postives = 34/49 (69.39%), Query Frame = 0
Query:    2 CAICLVEYETGDELRIIPGCGHRFHKECIDPWLETKAVCAYCKANVEAR 50
            CA+CL EY  GDELR++PGC H FH+ C+D WL  +  C  C+ + ++R
Sbjct:   91 CAVCLAEYADGDELRVLPGCAHAFHRRCVDQWLRRRPSCPLCRTSPQSR 139          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9519.31110.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KYP0_9PHAE4.410e-17790.06RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LEX7_ECTSI7.700e-17590.35RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A8J5S5L1_ZIZPA3.750e-1361.70RING-type domain-containing protein n=1 Tax=Zizani... [more]
A0A835ZK41_9STRA6.860e-1361.70RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A0P0YC54_ORYSJ2.630e-1255.10Os12g0620100 protein n=4 Tax=Oryza TaxID=4527 RepI... [more]
A0A3B6MIZ0_WHEAT2.020e-1151.02RING-type domain-containing protein n=2 Tax=Tritic... [more]
A0A6N2B2F2_SOLCI2.240e-1152.83RING-type domain-containing protein n=4 Tax=Solanu... [more]
A0A0E0RK53_ORYRU2.570e-1155.10Uncharacterized protein n=7 Tax=Oryza TaxID=4527 R... [more]
A0A0E0MPQ0_ORYPU3.260e-1155.10Uncharacterized protein n=1 Tax=Oryza punctata Tax... [more]
A0A8I6WLA5_HORVV4.150e-1148.98RING-type domain-containing protein n=1 Tax=Hordeu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 239..259
NoneNo IPR availablePANTHERPTHR45798:SF9E3 UBIQUITIN-PROTEIN LIGASE ATL45-RELATEDcoord: 2..56
NoneNo IPR availablePANTHERPTHR45798FAMILY NOT NAMEDcoord: 2..56
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 1..49
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 2..43
e-value: 1.1E-5
score: 35.0
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 1..44
e-value: 4.0E-12
score: 46.3
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 2..44
score: 10.999
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..48
e-value: 2.5E-16
score: 61.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9519contigEcto-sp8_S_contig9519:14..1798 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9519.31110.1mRNA_Ecto-sp8_S_contig9519.31110.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9519 2..3597 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9519.31110.1 ID=prot_Ecto-sp8_S_contig9519.31110.1|Name=mRNA_Ecto-sp8_S_contig9519.31110.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=311bp
MCAICLVEYETGDELRIIPGCGHRFHKECIDPWLETKAVCAYCKANVEAR
RTCCDRIYRSVSDRLGINLVAPTTIRFSSSRRTYTNEDVQLAMGPTLPAS
YGHSEMDYVGSAVAPRQASVDVEAGEGGEAEATTPVTAAAAPGQAFGGGG
PAGSDSTRSIRGAIVLPDQGGQPHEGSIVVQPASAPSYVVVPREYSLGGD
GIDEDHPGNGGEGPAGSSTRELASSSARASTTEGLPDDVARATDATEEKE
EIVAEAAEERRGSHKGFSDGRGGVVFGGNTEEFREAAAEAAAVAGARNGT
AAGGGAGPRL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD