prot_Ecto-sp8_S_contig9473.31016.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9473.31016.1
Unique Nameprot_Ecto-sp8_S_contig9473.31016.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length160
Homology
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9473.31016.1 vs. uniprot
Match: A0A6H5KZD1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZD1_9PHAE)

HSP 1 Score: 179 bits (453), Expect = 2.380e-49
Identity = 111/168 (66.07%), Postives = 119/168 (70.83%), Query Frame = 0 
Query:    1 MEKAAADDMFSSKEKAELGLPVLVEDDDNTKRATANGIAVTDQD---------AGDSPGGDSSSGGDHEAPSGLRGARGDGDSEVAAEEAVMTEGDEMTSSSRPVSAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXPEEESQANRTSRVETNDGSVDGSAGSDNTSRG 159
            MEKAA D+ FSS EKAELGLPVLVEDDDNTK A+A+GIAVTDQD         A DSPGGD+SSGGDHEAPSGLRGARGDG++EVAAE+A M EG EM SSSRP SAGA                            +EESQANRTSR ETNDGS DGSAGSDNTSRG
Sbjct:  641 MEKAARDNTFSSNEKAELGLPVLVEDDDNTKGASADGIAVTDQDFVFTGADKDASDSPGGDNSSGGDHEAPSGLRGARGDGEAEVAAEKAAMAEGGEMASSSRPASAGAGGSSATVSAQVRDGARRQEGIPMPGRGLDEESQANRTSRAETNDGSEDGSAGSDNTSRG 808
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9473.31016.1 vs. uniprot
Match: D7G410_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G410_ECTSI)

HSP 1 Score: 149 bits (375), Expect = 9.030e-39
Identity = 87/106 (82.08%), Postives = 92/106 (86.79%), Query Frame = 0 
Query:    1 MEKAAADDMFSSKEKAELGLPVLVEDDDNTKRATANGIAVTDQD------AGDSPGGDSSSGGDHEAPSGLRGARGDGDSEVAAEEAVMTEGDEMTSSSRPVSAGA 100
            MEKAAADD FSSKEKAELGLPVLVE DDNT+RA+A+GIAVTDQD      AGDSPGGDSSSGGDH+A SGLR ARG G+SEVAAEEA M EGDEMTSSSRP SAGA
Sbjct:  562 MEKAAADDAFSSKEKAELGLPVLVEGDDNTRRASADGIAVTDQDFVFAGSAGDSPGGDSSSGGDHDATSGLREARGGGESEVAAEEAAMAEGDEMTSSSRPASAGA 667
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9473.31016.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KZD1_9PHAE2.380e-4966.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G410_ECTSI9.030e-3982.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9473contigEcto-sp8_S_contig9473:2119..2598 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9473.31016.1mRNA_Ecto-sp8_S_contig9473.31016.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9473 1993..3523 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9473.31016.1 ID=prot_Ecto-sp8_S_contig9473.31016.1|Name=mRNA_Ecto-sp8_S_contig9473.31016.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=160bp
MEKAAADDMFSSKEKAELGLPVLVEDDDNTKRATANGIAVTDQDAGDSPG
GDSSSGGDHEAPSGLRGARGDGDSEVAAEEAVMTEGDEMTSSSRPVSAGA
GGSTATASAQVRDSAQHQEPIPIPGTGPEEESQANRTSRVETNDGSVDGS
AGSDNTSRG*
back to top