mRNA_Ecto-sp8_S_contig947.31010.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig947.31010.1
Unique NamemRNA_Ecto-sp8_S_contig947.31010.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
[Close]
BLAST of mRNA_Ecto-sp8_S_contig947.31010.1 vs. uniprot
Match: A0A6H5L4Y5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Y5_9PHAE)

HSP 1 Score: 416 bits (1069), Expect = 4.110e-146
Identity = 204/208 (98.08%), Postives = 206/208 (99.04%), Query Frame = 1 
Query:    1 MTTTHEDFEAYDGGDYKIFVGRGMERFRRGEVAGSVSDFDRAISLQPRLEAYMWQRGISLYYADQFEEGSRQFRKDVALNPNDTEEAIWTFMCESRIPSVGFATAKQRLVKISNERRPYMRAAYSLFKGDASESDLARQMEVSLGSNGVAGSGAPYFYANLYLGLYSEAKGDDVLARKYISAAVRSPYSKSGDYMCDVARVHQQARGW 624
            MTTTHEDFEAYDGGDYKIFVGRGMERFRRGEVAGSVSDFDRAISLQPRLEAYMWQRGISLYYADQFEEGSRQFRKDVALNPNDTEEAIWTFMCESRIPSVGFATAKQRLVKISNERRPYMRAAYSLFKGDASESDLA+QMEVSLGSNGVAGSGAPYFY NLYLGLYSEAKGDDVLARKYISAAVRSPY+KSGDYMCDVARVHQQ RGW
Sbjct:   62 MTTTHEDFEAYDGGDYKIFVGRGMERFRRGEVAGSVSDFDRAISLQPRLEAYMWQRGISLYYADQFEEGSRQFRKDVALNPNDTEEAIWTFMCESRIPSVGFATAKQRLVKISNERRPYMRAAYSLFKGDASESDLAKQMEVSLGSNGVAGSGAPYFYVNLYLGLYSEAKGDDVLARKYISAAVRSPYAKSGDYMCDVARVHQQVRGW 269
[Close]
BLAST of mRNA_Ecto-sp8_S_contig947.31010.1 vs. uniprot
Match: D8LR87_ECTSI (Binding n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR87_ECTSI)

HSP 1 Score: 413 bits (1061), Expect = 7.620e-146
Identity = 203/208 (97.60%), Postives = 205/208 (98.56%), Query Frame = 1 
Query:    1 MTTTHEDFEAYDGGDYKIFVGRGMERFRRGEVAGSVSDFDRAISLQPRLEAYMWQRGISLYYADQFEEGSRQFRKDVALNPNDTEEAIWTFMCESRIPSVGFATAKQRLVKISNERRPYMRAAYSLFKGDASESDLARQMEVSLGSNGVAGSGAPYFYANLYLGLYSEAKGDDVLARKYISAAVRSPYSKSGDYMCDVARVHQQARGW 624
            MTTTHEDFE YDGGDYKIFVGRGMERFRRGEVAGSVSDFDRAISLQPRLEAYMWQRGISLYYAD+FEEGSRQFRKDVALNPNDTEEAIWTFMCESRIPSVGFATAKQRLVKISNERRPYMRAAYSLFKGDASESDLA+QME SLGSNG AGSGAPYFYANLYLGLYSEAKGDDVLARKYISAAVRSPYSKSGDYMCDVARVHQQARGW
Sbjct:    1 MTTTHEDFETYDGGDYKIFVGRGMERFRRGEVAGSVSDFDRAISLQPRLEAYMWQRGISLYYADRFEEGSRQFRKDVALNPNDTEEAIWTFMCESRIPSVGFATAKQRLVKISNERRPYMRAAYSLFKGDASESDLAKQMEGSLGSNGAAGSGAPYFYANLYLGLYSEAKGDDVLARKYISAAVRSPYSKSGDYMCDVARVHQQARGW 208
[Close]
BLAST of mRNA_Ecto-sp8_S_contig947.31010.1 vs. uniprot
Match: A0A835ZJI4_9STRA (Binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJI4_9STRA)

HSP 1 Score: 226 bits (577), Expect = 2.970e-72
Identity = 112/202 (55.45%), Postives = 143/202 (70.79%), Query Frame = 1 
Query:   19 DFEAYDGGDYKIFVGRGMERFRRGEVAGSVSDFDRAISLQPRLEAYMWQRGISLYYADQFEEGSRQFRKDVALNPNDTEEAIWTFMCESRIPSVGFATAKQRLVKISNERRPYMRAAYSLFKGDASESDLARQMEVSLGSNGVAGSGAPYFYANLYLGLYSEAKGDDVLARKYISAAVRSPYSKSGDYMCDVARVHQQARGW 624
            D E Y G + K+++ RGMERFR+ +V  S+SDFDRA+ L P L  Y+WQRG+SLYYAD+F EG+ QFR DV++NPNDTEEAIW F CE+R  ++GF  A++RL+K+  + RPYMR AYSLF+G  SE DLA   +    S         +FYANLYLGLY+E + +  LAR YI  AV S Y  +GDYMC +ARVHQ+ RGW
Sbjct:   11 DPETYTGSNPKVYIVRGMERFRKAKVQESISDFDRALQLSPALGPYLWQRGLSLYYADRFAEGAAQFRLDVSVNPNDTEEAIWAFACEAR--TLGFQEARKRLLKVGQDTRPYMRTAYSLFQGSTSEQDLAMVGQTDDRS---------HFYANLYLGLYAECREEVDLARHYIGLAVGSKYCATGDYMCSLARVHQKVRGW 201
[Close]
BLAST of mRNA_Ecto-sp8_S_contig947.31010.1 vs. uniprot
Match: A0A7S1JEY7_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1JEY7_9EUGL)

HSP 1 Score: 226 bits (576), Expect = 3.390e-70
Identity = 106/186 (56.99%), Postives = 138/186 (74.19%), Query Frame = 1 
Query:   67 GMERFRRGEVAGSVSDFDRAISLQPRLEAYMWQRGISLYYADQFEEGSRQFRKDVALNPNDTEEAIWTFMCESRIPSVGFATAKQRLVKISNERRPYMRAAYSLFKGDASESDLARQMEVSLGSNGVAGSGAPYFYANLYLGLYSEAKGDDVLARKYISAAVRSPYSKSGDYMCDVARVHQQARGW 624
            GM++F +G+V GS+ DFDR I+  PR+E YMWQRG+SLYYA++ +EGSRQFR+DVA+NPNDTEEAIW F+CE+R PS+GF  A+  ++++  + RPYMRAAY LF+G  +E  L +           A  G   FY+NLYLGLY+EAKGD V A++YISAAV SPY +SGDYM  +A VH+  RGW
Sbjct:  167 GMQKFTKGDVQGSIEDFDRIIAGAPRMEPYMWQRGLSLYYAEELQEGSRQFRRDVAVNPNDTEEAIWAFLCEARDPSIGFEKARTNMLQVGRDSRPYMRAAYDLFRGTGTEEGLKQ----------AAVDGPSEFYSNLYLGLYAEAKGDSVAAQQYISAAVNSPYRRSGDYMYALAVVHKNLRGW 342
[Close]
BLAST of mRNA_Ecto-sp8_S_contig947.31010.1 vs. uniprot
Match: A0A7S2B9N6_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B9N6_9STRA)

HSP 1 Score: 193 bits (490), Expect = 2.550e-58
Identity = 104/197 (52.79%), Postives = 132/197 (67.01%), Query Frame = 1 
Query:   43 DYKIFVGRGMERFRRGEVAGSVSDFDRAISLQPRLEAYMWQRGISLYYADQFEEGSRQFRKDVALNPNDTEEAIWTFMCESRIPSVGFATAKQRLVKISNERRPYMRAAYSLFKGDASESDLARQMEVSLGSNGVAGSGAPYFYANLYLGLYSEAKGDDVLARKYISAAVRSPYSKSG---DYMCDVARVHQQARGW 624
            D +I   RGM+ FR+G+VAGS+  FD AI+   R   Y+WQRG+SLYYA +FEEG+ QFR+DVA NPNDTEEAIWTF+CE++  + GF  A+++++K+  + RP MR    LF GDASE DLA     + G     GS A  FYA LYLGLY+EAKGD V A+ YI  AV S Y K     DYM  ++ VH + RGW
Sbjct:   68 DPRIATSRGMQAFRKGDVAGSLEQFDAAIAADERYTLYLWQRGLSLYYAGKFEEGAVQFRRDVAANPNDTEEAIWTFLCEAQ--TNGFEAARKQMLKVGKDSRPIMRMVNELFLGDASEEDLA-----TAGHKAGPGSRAE-FYALLYLGLYNEAKGDAVHAKGYIQQAVSSAYGKGNPDPDYMYSLSVVHARERGW 256
[Close]
BLAST of mRNA_Ecto-sp8_S_contig947.31010.1 vs. uniprot
Match: A0A7S0D5P5_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0D5P5_MICPS)

HSP 1 Score: 191 bits (484), Expect = 6.070e-58
Identity = 97/192 (50.52%), Postives = 129/192 (67.19%), Query Frame = 1 
Query:   52 IFVGRGMERFRRGEVAGSVSDFDRAISLQPRLEAYMWQRGISLYYADQFEEGSRQFRKDVALNPNDTEEAIWTFMCESRIPSVGFATAKQRLVKISNERRPYMRAAYSLFKGDASESDLARQMEVSLGSNGVAGSGAPYFYANLYLGLYSEAKGDDVLARKYISAAVRSPY-SKSGDYMCDVARVHQQARGW 624
            +   RGM +F +G+V GS++DFD  I+  P    YMWQRG+SLYYA++  EGS QFR+DVA+NPNDTEEA+W F+CE+R   +GF  A++ L+ +  + R YMRAAY+LF G   E  L      ++ +NG A   A  FY  LYLGLY EAKGD+  A+  + AAV +PY S+SGDYM  +A VH + RGW
Sbjct:   31 LLTRRGMAKFTQGDVDGSIADFDAVIAAAPGRAPYMWQRGLSLYYAERLREGSAQFRRDVAVNPNDTEEAVWAFLCEARDKDIGFEKAREDLLVVGRDPRAYMRAAYALFAGTGDEDSLR-----AVAANGGA---AEDFYTWLYLGLYREAKGDENGAKAAVLAAVATPYGSRSGDYMAALAEVHAKRRGW 214
[Close]
BLAST of mRNA_Ecto-sp8_S_contig947.31010.1 vs. uniprot
Match: A0A7S0D7J5_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0D7J5_MICPS)

HSP 1 Score: 191 bits (484), Expect = 3.710e-57
Identity = 97/192 (50.52%), Postives = 129/192 (67.19%), Query Frame = 1 
Query:   52 IFVGRGMERFRRGEVAGSVSDFDRAISLQPRLEAYMWQRGISLYYADQFEEGSRQFRKDVALNPNDTEEAIWTFMCESRIPSVGFATAKQRLVKISNERRPYMRAAYSLFKGDASESDLARQMEVSLGSNGVAGSGAPYFYANLYLGLYSEAKGDDVLARKYISAAVRSPY-SKSGDYMCDVARVHQQARGW 624
            +   RGM +F +G+V GS++DFD  I+  P    YMWQRG+SLYYA++  EGS QFR+DVA+NPNDTEEA+W F+CE+R   +GF  A++ L+ +  + R YMRAAY+LF G   E  L      ++ +NG A   A  FY  LYLGLY EAKGD+  A+  + AAV +PY S+SGDYM  +A VH + RGW
Sbjct:   91 LLTRRGMAKFTQGDVDGSIADFDAVIAAAPGRAPYMWQRGLSLYYAERLREGSAQFRRDVAVNPNDTEEAVWAFLCEARDKDIGFEKAREDLLVVGRDPRAYMRAAYALFAGTGDEDSLR-----AVAANGGA---AEDFYTWLYLGLYREAKGDENGAKAAVLAAVATPYGSRSGDYMAALAEVHAKRRGW 274
[Close]
BLAST of mRNA_Ecto-sp8_S_contig947.31010.1 vs. uniprot
Match: A0A3B5Y5A5_WHEAT (Uncharacterized protein n=14 Tax=Triticeae TaxID=147389 RepID=A0A3B5Y5A5_WHEAT)

HSP 1 Score: 190 bits (482), Expect = 5.230e-57
Identity = 97/192 (50.52%), Postives = 130/192 (67.71%), Query Frame = 1 
Query:   52 IFVGRGMERFRRGEVAGSVSDFDRAISLQPRLEAYMWQRGISLYYADQFEEGSRQFRKDVALNPNDTEEAIWTFMCESRIPSVGFATAKQRLVKISNERRPYMRAAYSLFKGDASESDLARQMEVSLGSNGVAGSGAPYFYANLYLGLYSEAKGDDVLARKYISAAVRSPY-SKSGDYMCDVARVHQQARGW 624
            + V RGM+ F++G+VAGSV++FDRAI L PR +AY+WQRG+SLYY D+FEE + QFR DVA NPNDTEE+IW F+CE+++   G   A++R +++  +RRP MR AY+LFK       LA     S         G   FYA+LY GLY E++ D  LA+ +I AA ++PY S+SGDYM  +A VH Q R W
Sbjct:   79 LAVRRGMQLFQQGDVAGSVAEFDRAIELDPRQKAYLWQRGLSLYYLDRFEEAAEQFRLDVAANPNDTEESIWCFLCEAQL--YGVEEARKRFLEVGLDRRPVMREAYALFKDGGDPEKLASNFSTS--------PGGELFYASLYAGLYYESQKDADLAKSHIVAACKTPYGSRSGDYMASLAVVHCQCRNW 260
[Close]
BLAST of mRNA_Ecto-sp8_S_contig947.31010.1 vs. uniprot
Match: A0A836BA97_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A836BA97_9CHLO)

HSP 1 Score: 187 bits (475), Expect = 1.300e-55
Identity = 100/198 (50.51%), Postives = 133/198 (67.17%), Query Frame = 1 
Query:   37 GGDYKIFVGRGMERFRRGEVAGSVSDFDRAISLQPRLEAYMWQRGISLYYADQFEEGSRQFRKDVALNPNDTEEAIWTFMCESRIPSVGFATAKQRLVKISNERRPYMRAAYSLFK-GDASESDLARQMEVSLGSNGVAGSGAPYFYANLYLGLYSEAKGDDVLARKYISAAVRSPYSK-SGDYMCDVARVHQQARGW 624
            GGD +     GM++FRR EV  SV DFDR I L P ++ YMWQRG+SLYY  +F EG+ QFR DVA+NPNDTEE+IWTF+CE+++  VG   A+++ +++  + RP MRAAY  FK G   E  +A+  +     NG    G   FY  LY+GL+ EA+GD   A+K I+AAV +PY++ SGDYM  +ARVH Q RGW
Sbjct:   88 GGDPRTLTRSGMDKFRRNEVEASVDDFDRVIQLAPSMKPYMWQRGLSLYYLGRFAEGAEQFRIDVAVNPNDTEESIWTFLCEAQM--VGAEQARKQFLEVGRDSRPVMRAAYECFKTGQPPEKIMAQVTD-----NG----GHDTFYGLLYVGLWHEAEGDTAEAQKAITAAVATPYARLSGDYMAALARVHCQRRGW 274
[Close]
BLAST of mRNA_Ecto-sp8_S_contig947.31010.1 vs. uniprot
Match: A0A6G1E7E4_9ORYZ (Uncharacterized protein n=1 Tax=Oryza meyeriana var. granulata TaxID=110450 RepID=A0A6G1E7E4_9ORYZ)

HSP 1 Score: 187 bits (474), Expect = 1.380e-55
Identity = 95/192 (49.48%), Postives = 131/192 (68.23%), Query Frame = 1 
Query:   52 IFVGRGMERFRRGEVAGSVSDFDRAISLQPRLEAYMWQRGISLYYADQFEEGSRQFRKDVALNPNDTEEAIWTFMCESRIPSVGFATAKQRLVKISNERRPYMRAAYSLFKGDASESDLARQMEVSLGSNGVAGSGAPYFYANLYLGLYSEAKGDDVLARKYISAAVRSPY-SKSGDYMCDVARVHQQARGW 624
            + V RGM+ FR+G+VAGS+++FDRAI L  R + Y+WQRG+SLYY D+FEEG+ QFR DVA NPNDTEE+IW F+CE+++   G   A++R +++  + RP MR AY+LFK        A        SN  +GS    FY++LY GLY E++ D  +A+ +I+AA +SPY S+SGDYM  +A VH Q R W
Sbjct:   97 LAVRRGMQLFRQGDVAGSLAEFDRAIELDQRQKQYLWQRGLSLYYLDRFEEGAEQFRMDVAANPNDTEESIWCFLCEAQL--CGVEEARKRFLEVGLDSRPVMREAYALFKDGGDPQKFA--------SNFSSGSDGEIFYSSLYAGLYYESQKDAEMAKTHIAAACKSPYGSRSGDYMASLALVHCQCRNW 278
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig947.31010.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4Y5_9PHAE4.110e-14698.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LR87_ECTSI7.620e-14697.60Binding n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A835ZJI4_9STRA2.970e-7255.45Binding protein n=1 Tax=Tribonema minus TaxID=3033... [more]
A0A7S1JEY7_9EUGL3.390e-7056.99Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S2B9N6_9STRA2.550e-5852.79Hypothetical protein n=2 Tax=Florenciella parvula ... [more]
A0A7S0D5P5_MICPS6.070e-5850.52Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
A0A7S0D7J5_MICPS3.710e-5750.52Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
A0A3B5Y5A5_WHEAT5.230e-5750.52Uncharacterized protein n=14 Tax=Triticeae TaxID=1... [more]
A0A836BA97_9CHLO1.300e-5550.51Uncharacterized protein n=1 Tax=Chlamydomonas schl... [more]
A0A6G1E7E4_9ORYZ1.380e-5549.48Uncharacterized protein n=1 Tax=Oryza meyeriana va... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig947contigEcto-sp8_S_contig947:374..5337 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score415.6
Seed ortholog evalue1.4e-113
Seed eggNOG ortholog2880.D8LR87
Model size627
Hectar predicted targeting categoryother localisation
Exons6
EggNOG OGs28IPX@1,2QR10@2759
Ec32 ortholog descriptionTetratricopeptide repeat-containing domain protein
Ec32 orthologEc-06_003480.1
Cds size627
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig947.31010.1prot_Ecto-sp8_S_contig947.31010.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig947 374..5337 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681145304.9911308-CDS-Ecto-sp8_S_contig947:373..4651681145304.9911308-CDS-Ecto-sp8_S_contig947:373..465Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig947 374..465 -
1681145305.0027008-CDS-Ecto-sp8_S_contig947:1126..13201681145305.0027008-CDS-Ecto-sp8_S_contig947:1126..1320Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig947 1127..1320 -
1681145305.0153484-CDS-Ecto-sp8_S_contig947:1964..20751681145305.0153484-CDS-Ecto-sp8_S_contig947:1964..2075Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig947 1965..2075 -
1681145305.0252106-CDS-Ecto-sp8_S_contig947:2970..30131681145305.0252106-CDS-Ecto-sp8_S_contig947:2970..3013Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig947 2971..3013 -
1681145305.037023-CDS-Ecto-sp8_S_contig947:4754..48751681145305.037023-CDS-Ecto-sp8_S_contig947:4754..4875Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig947 4755..4875 -
1681145305.04711-CDS-Ecto-sp8_S_contig947:5271..53371681145305.04711-CDS-Ecto-sp8_S_contig947:5271..5337Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig947 5272..5337 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig947.31010.1

>prot_Ecto-sp8_S_contig947.31010.1 ID=prot_Ecto-sp8_S_contig947.31010.1|Name=mRNA_Ecto-sp8_S_contig947.31010.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=209bp
MTTTHEDFEAYDGGDYKIFVGRGMERFRRGEVAGSVSDFDRAISLQPRLE
AYMWQRGISLYYADQFEEGSRQFRKDVALNPNDTEEAIWTFMCESRIPSV
GFATAKQRLVKISNERRPYMRAAYSLFKGDASESDLARQMEVSLGSNGVA
GSGAPYFYANLYLGLYSEAKGDDVLARKYISAAVRSPYSKSGDYMCDVAR
VHQQARGW*
back to top

mRNA from alignment at Ecto-sp8_S_contig947:374..5337-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig947.31010.1 ID=mRNA_Ecto-sp8_S_contig947.31010.1|Name=mRNA_Ecto-sp8_S_contig947.31010.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=4964bp|location=Sequence derived from alignment at Ecto-sp8_S_contig947:374..5337- (Ectocarpus species8 EcLAC_412)
ATGACCACTACCCACGAGGACTTCGAGGCCTACGACGGTGGAGACTACAA
GATTTTCGTCGGCAGGGTGAGTTAGGTTGTTGGTACATAGCTCAAACGCC
GTCGGAGGAGCTATAGCTACTGCTGTAGCTGGCCGTGGCCAAAGGCTTTT
TTTTTTGTCCGGCGGCGTGGTTGTTGACCCGGCCAAAGAATCGGAACCAA
TGCACGGCACTTCTGGTGTTACCTGGTGGCAGGCGTCGCACGCCCACCAT
GCCGTGATAGCCTTAGGAAAAAAAGACCGTTTGCCTGCACCCCTCTGCTG
GGAGCAAGGGCGTCTTCTGCTCCCCATGGCACCAACAAGAGGTATCGTTA
CAAGGACGGCGACCGTTGAATGCAAAACAAGTTCGACATGATGTAACCGA
AGTGCCTGTGCGTGCTTGGATCTCTTCCGCTTCCTGCTTTTGATGCTGCC
AACAAAAAAAAGGGGATGGAGAGGTTTAGGAGGGGGGAGGTGGCAGGCTC
CGTGAGCGACTTCGATCGCGCCATCAGCCTCCAGCCTCGCCTAGAGGCCT
ATATGTGGCAGAGGGGCATCAGCTTATATTACGGTGAGTCACGGTAACGG
CAAAGCATCGGAGCATTTACTATGTGGCTGCTGATTGGAGGTTGTTGTAC
AACGTCCAACGATTTTTGCGCGGTGGTCTGTGCCTGGAAATTTCTTGAGG
TTGCTGCTGTGTTGCGTGCTCCGCTGCTCTCGCCGCCGCCGTACCCCGCA
ATGTTGCGGTAAGGGGAGAGGGCGGGGCCTAGCAGCAGGCGTTGACGTGT
CCCTGTGTAGTGGCTGTGGTCAGCAGTGCTATCAATCGGTGCCGTTTAAA
CGCTTTTTGAAGGAGCGTCGTATGTAATGTAAGATGCAACATGTTACTTC
CACTTCTAGCTTGTCGCGGACTACTTGCCATTTTTTGAAGATTTTAGGGT
CATGAGCGACTGCTGTCAGCCTCTCAGGCAACGAGATCCTGTATCCATCA
GGCTTTCTCCCCCCACGCACTGCAGCATTTCCCCTTCCGCTACTGCTGTG
GAGTTGTCTCGAACAGGGTAGGTAGCCTCCCAGTGATTGCACTCGCTTCG
TGATGCATGCGAAGGTTGAGTAGTGTCGTCAGCCTTTACCGGTTTGGTAC
GTACGTCGTAAATCGGCATTTTTTTAGAACAGTTCTTTTCGCTCGCTTGG
CGCAGGCCAGGTCCTATCATGTACCGTACGTATGCATGCGGACATGCGTA
CACATGTTTGAGCGGTACGGACGGTAAACATGCGTATCCTGTGGTCTAAA
GTGTTGGCTTCGTGGGTGGCAGACGGCGCCAATCCTGCGAGGAACATATG
CAAGGCACATGCAGCGACAGCACCAGGCCTTTCTTTCGCCTTACTTCCGG
TGCCTGTTCTGTTGGGCCACTCGGAACTTCAAATTGACCTGAAAACAGAA
AAGGGATGCATTTCCACCAGTATGCTCGCATGGGTGTCGAGCCACCTGGT
GTTGAGAAGCAATGGGCAATGGGCCGAGGAGTTATTTACCGGAGTACTCC
TGTATCCTCGTATCCGCTATTTTGACCTTTGCCATAAAAGCGATACAGCA
GTACACAGCAGTACACCTTTGCTACATCTGGCGTCATCATTGCTTTTCCC
AGCGTGAAATACAGACGTGGGAGTTTGACAACAGGCTTCTTCTAAACGTA
GCTCAGAAATTATTGGTTCGCATGTCCCCCAAAACCGTACCGCAGTACCT
GTGCAGGATGTGTAGTCCAACAACAGCAGCTACCCATTGAACTGGAGGGT
TACACAAATACCCCGTATACTACATTGTATGATATCTCAAACGGGCGATC
TTATTCGTGTTAATTTTCGCATGAACTTTGCATACATTGCGACAACGAAG
CACGTTGTATACATGCTACAGCAGTACATCCGTATCCAACATTAGTCTTT
CGGCGAGGGTGACGTATTTTTTCTAAAAAAATCCCGACTTGGACCGCACC
ACCCCCACATGTTTTGGTGTTTGTTCTCTCCTATGATATGTACATGCCCA
ATTAGCATTGTTCCGAAGTATTGTATTTGTACAACGTGTATTCACTGCTA
GCCTGTTCCACATCCCGTTTCTTTCGCCCTTCTCCTGATTTCCTCTTCCA
CCTTCCCGTCCGCTCTCTTTCGCTTGGCTGCTACTATTTGTACATGTTTC
TTTCTTTTCCGTCGTTTTCGTTTTCGATGGGACACGTCATTCGTGTTTTG
GTCTCCGATGTGACGCGACGCGATGCATCTAATTTGCTTGCATCTTGGAT
TCGAAAACGACCTGGCCTGGACAGCCGACCAGTTCGAGGAGGGGTCCCGG
CAGTTCCGTAAAGACGTGTGAGTAAAATACAAAATACAATTAGGGAAAAG
AATGCAAAGCGTACCTCGGATTGCCGTTGCCATTGCTGTTCCTCCCCGCC
GCACCTCTCTGTATGAAAAATAAATACACACACAAAAAGGACTACCCATT
GGAGATATACCCACAGCAGTAGTCGAACGGTATGTGGTGGAGTCTTTTCA
GTGAGTGGAGGAAAACCGACTGGGTACTGGACTTATTTCGAGTCTGTTTA
AGTCTAAGCATTAAGGGAAAATAAGTACACACACAGAAAGGACTACCCAT
TCGAGATATACGCACAGCAGTAGTCGAACGGGATTTTGTGGTAACGACGT
ACGTATGGTAGTGGTATTTTTTATTTCCCCCCGACGAATACTCGCAGGCG
TTACTCACGATCGAGGTGCCAAGTACGACACACGGGAATGTGTCACGATG
CTTCTAAGAGCATGCATGCTTTGTCTGCATCATGCGCTTGTGATGGGAGT
GATGCAGGTTACCCACGGAAAAGTTTACGCTGGCGCCAGAACGATACTGG
AAGACGAAAAGCTCGCGCACAAGCGTGGCCGATCAATCGGGTTTTTTTTG
CACACATGCCCCGCTCCCCGTTCAGCTTCACCAACACCTGTCTAGACCGG
ATGAATGCATGCGCTATATATATCGTATAGCACCGGCGTCTGCATCAGCC
AGTTCACAAACGCATGAACTTTCTCCGCGCTACTACTAATTAGAGACGGA
CGAAAAATCCAGCGTCTTTATCGCAACCAGCGGCGATATATTCCCGCGTC
CTGTTTGATGCTCACCTCTCGCCTGTCGCGTGTATCAACACCCCCCTCTG
ACTCCCCACACCGCATCGCTCTAATGGTTTCCTTCCCGCGCACCTGCTCT
TGTCTGGTACAGCGCGTTGAATCCTAACGACACCGAGGAGGCGATCTGGA
CCTTCATGTGCGAATCGAGGATACCAAGCGTTGGGTTCGCCACGGCAAAG
CAGAGGCTCGTCAAGATTTCCAAGTGAGATGACCGGCGCGAGGTGTCGTT
ACCGTAATTGTGCGTGTTATCGCACCCCCGTGTTATTAATAGCGTTTTTG
TACGGCGTATTTCTCCACAACCAGGGAAGTTTCACCTCCGAAAAGGGTAT
TGTAGTTTTGGAACCATCTCGTCGAGGGCTTTCCGGAGAGGTATCAGTTG
GTGCTCGCACCCTCCTAGTTGTGGAGAAATACGCTATTATCAAAAAACGC
GAACACGGGGGTGCGATAACACGCACAATTACGGTACACTCCCCACTCCC
AGGGATTGTTCTCGGCCAATCAGCAGAAAATTCAGCGGCGCCGGACGTTG
ACCAGTAGGATATAACGTCGGGCGCTTTCATGCATTTCAAATCATGTTGA
AGTTGTTCCCCGCTTGCATGTAGTGTCGGAGCAGGGTGATGGTCGCGTTG
CGCACACACCGCGTTTGTAAGTTGCTAAATCACACCTCGCGCTTTCATGA
CATTTTGTCGTTTTGGTTTTGGTTTGCCCTACTGCTGTTTATATCAGCAA
GTGCCGGTACGCGGGGAAAGATATGATCGACAAAAACTGACCCCCCCCCC
TCCCGGATTTGGATTTTTCCGCCTTCCCTTGTCCTCGTGAACTCCCTTGC
TTTGCGTCTCTTCTCAGCGAGCGACGTCCATACATGCGCGCGGCGTACTC
GCTGTTCAAGGGCGACGCTTCGGAGAGCGACCTCGCCAGGCAGATGGAGG
TCTCGTTAGGGAGCAACGGCGTCGCCGGTTCGGGGGCCCCGTATTTCTAC
GCGAACCTTTACCTGGGCCTCTACTCGGAGGCGAAGGGCGACGACGTACT
CGCGAGAAAATGTGAGGAAGCTTCTCGTCTATGCATACGGTTGTCCTTGG
GAGGTAGTATGTACTTGGGAAGGTTTAAATAGTACTCTACAGTGGCGGGC
CCTCAACAACACTCGGCTCATCGGCGGGCGCTATTCATTGGACAAGCTGG
GTTGGGTGATTCAGTCTCTACCCGGCAATGTCACCCGGCGCTTCTGCAGG
GCCACCGGCGCTGATCAACGGGCGTTATCGATAGTAGTAGTGCGCACTGT
GGTAATAGTGGTAGTGCGCAGGGCGAAAATACCACTGTCACGTGAAAAAA
ATCAAAAGGTGCTCCCGTAGTGCGATATGGCTGATCCTTCCGGCTTCATA
CCCATTCTTTTACCCGCCGTGGTACATTTGGCGTGCAATTCGTTCCACGA
TCTGTGTTCCGTGTTTATTTTTGTAGAATTTTTCTTACAAACAGAAAGAT
GCGTCTCTTCCACAGGTAAGAACATGTCCGGTGAATGAACAATGAATTTA
TCGTTGTACGGTGACCAACTTACTGAAGTGTAGTCCTACCGTTCCCCGAG
CGGTATCTCCCCCGTGTGAGTAACAGGCTCGACAAGAGAGTTCGGTGGCC
GTCTTGTGTTTTCTCTCGAGAGGCTGATGAACGTTTCTCGTCTCTTTTCT
CTCCCCCCGATGCTGTCGTCAGACATTTCCGCGGCGGTGCGGTCCCCGTA
CTCCAAGTCGGGAGACTACATGTGCGACGTGGCACGTGTGCACCAACAGG
CCAGGGGATGGTGA
back to top

Coding sequence (CDS) from alignment at Ecto-sp8_S_contig947:374..5337-

>mRNA_Ecto-sp8_S_contig947.31010.1 ID=mRNA_Ecto-sp8_S_contig947.31010.1|Name=mRNA_Ecto-sp8_S_contig947.31010.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=627bp|location=Sequence derived from alignment at Ecto-sp8_S_contig947:374..5337- (Ectocarpus species8 EcLAC_412)
ATGACCACTACCCACGAGGACTTCGAGGCCTACGACGGTGGAGACTACAA
GATTTTCGTCGGCAGGGGGATGGAGAGGTTTAGGAGGGGGGAGGTGGCAG
GCTCCGTGAGCGACTTCGATCGCGCCATCAGCCTCCAGCCTCGCCTAGAG
GCCTATATGTGGCAGAGGGGCATCAGCTTATATTACGCCGACCAGTTCGA
GGAGGGGTCCCGGCAGTTCCGTAAAGACGTCGCGTTGAATCCTAACGACA
CCGAGGAGGCGATCTGGACCTTCATGTGCGAATCGAGGATACCAAGCGTT
GGGTTCGCCACGGCAAAGCAGAGGCTCGTCAAGATTTCCAACGAGCGACG
TCCATACATGCGCGCGGCGTACTCGCTGTTCAAGGGCGACGCTTCGGAGA
GCGACCTCGCCAGGCAGATGGAGGTCTCGTTAGGGAGCAACGGCGTCGCC
GGTTCGGGGGCCCCGTATTTCTACGCGAACCTTTACCTGGGCCTCTACTC
GGAGGCGAAGGGCGACGACGTACTCGCGAGAAAATACATTTCCGCGGCGG
TGCGGTCCCCGTACTCCAAGTCGGGAGACTACATGTGCGACGTGGCACGT
GTGCACCAACAGGCCAGGGGATGGTGA
back to top