prot_Ecto-sp8_S_contig94534.30985.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig94534.30985.1
Unique Nameprot_Ecto-sp8_S_contig94534.30985.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length121
Homology
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BLAST of mRNA_Ecto-sp8_S_contig94534.30985.1 vs. uniprot
Match: D7FSU6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSU6_ECTSI)

HSP 1 Score: 200 bits (509), Expect = 7.770e-62
Identity = 104/118 (88.14%), Postives = 107/118 (90.68%), Query Frame = 0 
Query:    4 QSDNLRLQEQQVSPGQQDQPPPDLDDFLREAQGKAPLFAGMVVVIMPEASSGQVDMTERSSKSWGLVATDHQVVTSDDGGGAXXGDGDDEVMIKAPRMGARALRVERSRVANSTAYQG 121
            Q DNLR QEQQVS GQQDQPPPDLDDFLREAQ KAPLFAGM+V+IMPEASSGQVDMTERSSKSWGLVA DHQVVT D GGG   GDGDD+VMIKAPR GARALRVERSRVANSTAYQG
Sbjct:  112 QPDNLRFQEQQVSLGQQDQPPPDLDDFLREAQAKAPLFAGMIVIIMPEASSGQVDMTERSSKSWGLVAADHQVVTIDGGGGTGAGDGDDKVMIKAPRTGARALRVERSRVANSTAYQG 229
[Close]
BLAST of mRNA_Ecto-sp8_S_contig94534.30985.1 vs. uniprot
Match: D7FSU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSU5_ECTSI)

HSP 1 Score: 92.4 bits (228), Expect = 8.930e-21
Identity = 51/88 (57.95%), Postives = 60/88 (68.18%), Query Frame = 0 
Query:   27 LDDFLREAQGKAPLFAGMVVVIMPEASSGQVDMTERSSKSWGLVATDHQVVTSDDGGGAXXGDGDDEVMIKAPRMGARALRVERSRVA 114
            +DDFL EA   AP+FAGMVV IMPE SS   D+ +R    WGLV T+++ VT   GGGA  GD  D VM+ APR G RA+ VERSRVA
Sbjct:   25 IDDFLSEAHAAAPIFAGMVVEIMPETSSAPPDIRKRW---WGLVGTNNKAVTRQGGGGAGTGDHGDRVMLGAPRTGTRAIPVERSRVA 109
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig94534.30985.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FSU6_ECTSI7.770e-6288.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FSU5_ECTSI8.930e-2157.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig94534contigEcto-sp8_S_contig94534:235..597 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig94534.30985.1mRNA_Ecto-sp8_S_contig94534.30985.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig94534 235..597 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig94534.30985.1 ID=prot_Ecto-sp8_S_contig94534.30985.1|Name=mRNA_Ecto-sp8_S_contig94534.30985.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=121bp
MPAQSDNLRLQEQQVSPGQQDQPPPDLDDFLREAQGKAPLFAGMVVVIMP
EASSGQVDMTERSSKSWGLVATDHQVVTSDDGGGAGAGDGDDEVMIKAPR
MGARALRVERSRVANSTAYQG
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