prot_Ecto-sp8_S_contig9153.30487.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9153.30487.1
Unique Nameprot_Ecto-sp8_S_contig9153.30487.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length381
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9153.30487.1 vs. uniprot
Match: A0A6H5J6J4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6J4_9PHAE)

HSP 1 Score: 697 bits (1800), Expect = 9.470e-253
Identity = 362/378 (95.77%), Postives = 368/378 (97.35%), Query Frame = 0 
Query:    3 MTKRTRPPTAFGRAAVAIFVAAAGTARLALGATLDISSPASTSSYHAGDAVPVQWIYEGTGENFAIHLLKGDEEVADLCFAEENGVCFDLTQDQTVILPDIGLDSGSDYAVRVRDQSSDLEDTSETFTIIGTSTSNVEITSPDGYTTLNAGGDVTVSWLYVGENTEFDIYLRQDGERVSNNLCADQEGGSCTATIPVASATITLPEEVENAADYRLLVVDKVNDDAWGLSVELPVGVAAASVDTGSDSSAATKLALVIGLSAGGVCLLAVLLAGFRTRNKNRRREEKLATLDMLNKRRPAPSVSLAVEGMAEPDSPDQRAFINPIYSTSQIFHAEQYEGQITPPTGDSAMWRRSRDLGRYVGRTISKSFSLSQSNMND 380
            MTKRT PPTAFGRAAVA FVAAAGTARLALGATLDISSPASTSSYHAGDAVPVQWIYEGTGENFAIHLLKGDEEVADLC AEENGVCFDLTQDQTVILPD GL+SGSDY VRVRDQSSDLEDTSETFTIIGTSTSNVEITSPDGYTTLNAGG V+VSWLYVGEN EFDIYLRQ+GERVS+NLCADQEGGSCTATIPVASATITLPEE+ENAADYRLLVVDKVNDDAWGLSVELPVGVAAASVDTGSDSSAATKLALVIGLSAGGVCLLAVLLAG RTRNKNRRREEKLATLDMLNKRRPAPSVSLAVEGMAEPDSPDQRAFINPIY+TSQ FHAEQYEGQITPPTGDSAMWRRSRDLGRYVGRTISKSFS SQSNMND
Sbjct:    1 MTKRTPPPTAFGRAAVATFVAAAGTARLALGATLDISSPASTSSYHAGDAVPVQWIYEGTGENFAIHLLKGDEEVADLCSAEENGVCFDLTQDQTVILPDTGLESGSDYTVRVRDQSSDLEDTSETFTIIGTSTSNVEITSPDGYTTLNAGGVVSVSWLYVGENMEFDIYLRQNGERVSSNLCADQEGGSCTATIPVASATITLPEEIENAADYRLLVVDKVNDDAWGLSVELPVGVAAASVDTGSDSSAATKLALVIGLSAGGVCLLAVLLAGLRTRNKNRRREEKLATLDMLNKRRPAPSVSLAVEGMAEPDSPDQRAFINPIYTTSQTFHAEQYEGQITPPTGDSAMWRRSRDLGRYVGRTISKSFSHSQSNMND 378
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BLAST of mRNA_Ecto-sp8_S_contig9153.30487.1 vs. uniprot
Match: D7G260_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G260_ECTSI)

HSP 1 Score: 588 bits (1517), Expect = 8.340e-210
Identity = 311/362 (85.91%), Postives = 327/362 (90.33%), Query Frame = 0 
Query:    1 MVMTKRTRPPTAFGRAAVAIFVAAAGTARLALGATLDISSPASTSSYHAGDAVPVQWIYEGTGENFAIHLLKGDEEVADLCFAEENGVCFDLTQDQTVILPDIGLDSGSDYAVRVRDQSSDLEDTSETFTIIGTSTSNVEITSPDGYTTLNAGGDVTVSWLYVGENTEFDIYLRQDGERVSNNLCADQEGGSCTATIPVASATITLPEEVENAADYRLLVVDKVNDDAWGLSVELPVGVAAASVDTGSDSSAATKLALVIGLSAGGVCLLAVLLAGFRTRNKNRRREEKLATLDMLNKRRPAPSVSLAVEGMAEPDSPDQRAF-INPIYSTSQIFHAEQYEGQITPPTGDSAMWRRSRDLGR 361
            MV+TKRTRPPTAFGRAA AIFVA A TAR+ALGATLDISSPASTSSYHAGDAVPV+WIYEGTGENFAIHLLKGDEEVADLCFAEENGVCFDLTQ+QTVILPD  L+SGSDY VRVRDQSSDLEDTSETFTIIGTSTSNVEITSPDGYTTLNAGGD++VSWLYVGENTEFDIYLRQDGERVSNNLCADQEGGSCTATIPVASATITLPEE+EN ADYRLLVVDKVNDDAWGLSVELPVGVAAASVDTGSDSSAATKLALVIGLSAGGVCLLAVLLAGFRT+NKNRRREEKLATLDMLNKRRPAPSVSLAVEGMAEPDSPDQ +  ++           +   G +   +GDS     + D GR
Sbjct:    1 MVITKRTRPPTAFGRAAAAIFVAGASTARVALGATLDISSPASTSSYHAGDAVPVEWIYEGTGENFAIHLLKGDEEVADLCFAEENGVCFDLTQEQTVILPDTDLESGSDYTVRVRDQSSDLEDTSETFTIIGTSTSNVEITSPDGYTTLNAGGDLSVSWLYVGENTEFDIYLRQDGERVSNNLCADQEGGSCTATIPVASATITLPEEIENGADYRLLVVDKVNDDAWGLSVELPVGVAAASVDTGSDSSAATKLALVIGLSAGGVCLLAVLLAGFRTKNKNRRREEKLATLDMLNKRRPAPSVSLAVEGMAEPDSPDQTSGGVSGWLGRFMPQRLKSKSGGVGSDSGDSGAITPNEDRGR 362
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9153.30487.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J6J4_9PHAE9.470e-25395.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G260_ECTSI8.340e-21085.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 28..33
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 256..277
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..33
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 278..380
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 16..27
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..255
NoneNo IPR availableTMHMMTMhelixcoord: 256..277
NoneNo IPR availableTMHMMTMhelixcoord: 13..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9153contigEcto-sp8_S_contig9153:180..6361 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9153.30487.1mRNA_Ecto-sp8_S_contig9153.30487.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9153 2..6740 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9153.30487.1 ID=prot_Ecto-sp8_S_contig9153.30487.1|Name=mRNA_Ecto-sp8_S_contig9153.30487.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=381bp
MVMTKRTRPPTAFGRAAVAIFVAAAGTARLALGATLDISSPASTSSYHAG
DAVPVQWIYEGTGENFAIHLLKGDEEVADLCFAEENGVCFDLTQDQTVIL
PDIGLDSGSDYAVRVRDQSSDLEDTSETFTIIGTSTSNVEITSPDGYTTL
NAGGDVTVSWLYVGENTEFDIYLRQDGERVSNNLCADQEGGSCTATIPVA
SATITLPEEVENAADYRLLVVDKVNDDAWGLSVELPVGVAAASVDTGSDS
SAATKLALVIGLSAGGVCLLAVLLAGFRTRNKNRRREEKLATLDMLNKRR
PAPSVSLAVEGMAEPDSPDQRAFINPIYSTSQIFHAEQYEGQITPPTGDS
AMWRRSRDLGRYVGRTISKSFSLSQSNMND*
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