mRNA_Ecto-sp8_S_contig1095.1324.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig1095.1324.1
Unique NamemRNA_Ecto-sp8_S_contig1095.1324.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
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BLAST of mRNA_Ecto-sp8_S_contig1095.1324.1 vs. uniprot
Match: A0A6H5K920_9PHAE (Lipoxygenase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K920_9PHAE)

HSP 1 Score: 478 bits (1230), Expect = 4.200e-156
Identity = 238/246 (96.75%), Postives = 241/246 (97.97%), Query Frame = 1 
Query:    1 TLERISKDFSPEVDFAARGMTKTDFPGRYPYRDFGLKYWDAIDTWVKEYLDVYYSTDADITDDYELQAFVNELVTVGEFKWLAEWDNSTDKKGLLAKVLASLIYSASTLHAAVNFPQKTTMSFAPSNPASVYVPPPTDKTERTFEDYLAYLPPLEIATRQVILFTFLGNVFYTTLGDYEADQFSDKRVLAPLAKFQQALEDIETDMVDENAFVVSSWRKRGKGKRAAANFGYTTLLPEKVPQSINI 738
            TLERISKDFSPEVDFAARGMTK DFPGRYPYRDFGLKYWDAI TWVKEYL+VYYSTDADITDDYELQAFVNEL TVGEFKWLAEWDNSTDKKGLLAKVLASLIYSASTLHAAVNFPQKTTMSFAPSNPASVYV PPTDKTERTFEDYLAYLPPLEIATRQVILFTFLGNVFYTTLGDYEA+QFSD+RVLAPLAKFQQALEDIETDMVDENAFVVSSWRKRGK KRAAANFGYTTLLPEKVPQSINI
Sbjct:  431 TLERISKDFSPEVDFAARGMTKADFPGRYPYRDFGLKYWDAIYTWVKEYLNVYYSTDADITDDYELQAFVNELATVGEFKWLAEWDNSTDKKGLLAKVLASLIYSASTLHAAVNFPQKTTMSFAPSNPASVYVTPPTDKTERTFEDYLAYLPPLEIATRQVILFTFLGNVFYTTLGDYEANQFSDQRVLAPLAKFQQALEDIETDMVDENAFVVSSWRKRGKEKRAAANFGYTTLLPEKVPQSINI 676
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BLAST of mRNA_Ecto-sp8_S_contig1095.1324.1 vs. uniprot
Match: A0A6H5KD72_9PHAE (Lipoxygenase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KD72_9PHAE)

HSP 1 Score: 419 bits (1078), Expect = 2.320e-134
Identity = 206/246 (83.74%), Postives = 224/246 (91.06%), Query Frame = 1 
Query:    1 TLERISKDFSPEVDFAARGMTKTDFPGRYPYRDFGLKYWDAIDTWVKEYLDVYYSTDADITDDYELQAFVNELVTVGEFKWLAEWDNSTDKKGLLAKVLASLIYSASTLHAAVNFPQKTTMSFAPSNPASVYVPPPTDKTERTFEDYLAYLPPLEIATRQVILFTFLGNVFYTTLGDYEADQFSDKRVLAPLAKFQQALEDIETDMVDENAFVVSSWRKRGKGKRAAANFGYTTLLPEKVPQSINI 738
            TLERISKDFSPEVDFAARG+TKTDFPGRYPYRD GLKYW+AI TWVKEYLDVYYS+D DI+DDYELQAFV ELVTVGE KWLAE +NSTD+K  LAKVLASLIYSAS LHAAVNFPQ+  MSF PSNP S+YVPPPTDKTER+FE+YLAYLPPLEIA  QV+    LG VF+T LGDY+A+QFSDKRV APLAKFQQA+EDIETDMV+ENAFVVSSWRKRGKGK+AAANFGYTTLLP+KVPQSINI
Sbjct:  359 TLERISKDFSPEVDFAARGVTKTDFPGRYPYRDVGLKYWEAIHTWVKEYLDVYYSSDVDISDDYELQAFVKELVTVGEVKWLAELENSTDQKVFLAKVLASLIYSASVLHAAVNFPQQPIMSFVPSNPPSIYVPPPTDKTERSFEEYLAYLPPLEIAAEQVVTGNILGTVFHTKLGDYDANQFSDKRVQAPLAKFQQAIEDIETDMVNENAFVVSSWRKRGKGKKAAANFGYTTLLPDKVPQSINI 604
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BLAST of mRNA_Ecto-sp8_S_contig1095.1324.1 vs. uniprot
Match: D8LBX4_ECTSI (Lipoxygenase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBX4_ECTSI)

HSP 1 Score: 335 bits (860), Expect = 1.630e-101
Identity = 156/245 (63.67%), Postives = 193/245 (78.78%), Query Frame = 1 
Query:    4 LERISKDFSPEVDFAARGMTKTDFPGRYPYRDFGLKYWDAIDTWVKEYLDVYYSTDADITDDYELQAFVNELVTVGEFKWLAEWDNSTDKKGLLAKVLASLIYSASTLHAAVNFPQKTTMSFAPSNPASVYVPPPTDKTERTFEDYLAYLPPLEIATRQVILFTFLGNVFYTTLGDYEADQFSDKRVLAPLAKFQQALEDIETDMVDENAFVVSSWRKRGKGKRAAANFGYTTLLPEKVPQSINI 738
              RI++DFSPE DFA+R +TK DFPGRYPYRD+G++YW+A  TWVKEYLD+YY +D D+ +DYELQA + ELV +G+  WL ++  + DKK L+AKV+AS IYSASTLHAAVNFPQK +MSF PS P SVY PPP DK ERTF++++ YLPP+EIAT  V + T LG++F+T LG YE   F D R+  PLAKFQQA+EDIE D+V +NA VVS WR+RGK KRAA N  YTTLLP+ +PQSINI
Sbjct:  408 FNRIAEDFSPEADFASRQITKEDFPGRYPYRDYGMRYWEATHTWVKEYLDIYYKSDKDVEEDYELQAMIEELVDIGKVYWLKDYYTTDDKKALIAKVIASWIYSASTLHAAVNFPQKPSMSFVPSCPGSVYAPPPIDKRERTFDEFMNYLPPMEIATIHVAMLTLLGDIFHTKLGQYETHNFDDDRIAEPLAKFQQAIEDIEDDLVADNADVVSGWRQRGKAKRAANNMAYTTLLPDNIPQSINI 652
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BLAST of mRNA_Ecto-sp8_S_contig1095.1324.1 vs. uniprot
Match: A0A6H5JW78_9PHAE (Lipoxygenase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW78_9PHAE)

HSP 1 Score: 242 bits (618), Expect = 1.950e-72
Identity = 121/160 (75.62%), Postives = 136/160 (85.00%), Query Frame = 1 
Query:  259 NSTDKKGLLAKVLASLIYSASTLHAAVNFPQKTTMSFAPSNPASVYVPPPTDKTERTFEDYLAYLPPLEIATRQVILFTFLGNVFYTTLGDYEADQFSDKRVLAPLAKFQQALEDIETDMVDENAFVVSSWRKRGKGKRAAANFGYTTLLPEKVPQSINI 738
            NS+       KVLASLIYSAS LHAAVNFPQ+  MSF PSNP S+YV PPTDKT+R+FE+YLAYLPPLEIA  QV+    LG VF+T LGDY+A+QFSDKRV APL KFQQA+EDIETDM++ENAFV SSWRKRGKGK+AAANFGYTTLLP+KVPQSINI
Sbjct:    7 NSSRGSDPAIKVLASLIYSASVLHAAVNFPQQPIMSFVPSNPPSIYVQPPTDKTKRSFEEYLAYLPPLEIAAEQVVTGNILGTVFHTKLGDYDANQFSDKRVQAPLTKFQQAIEDIETDMINENAFVASSWRKRGKGKKAAANFGYTTLLPDKVPQSINI 166
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BLAST of mRNA_Ecto-sp8_S_contig1095.1324.1 vs. uniprot
Match: A0A836CEV5_9STRA (Lipoxygenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEV5_9STRA)

HSP 1 Score: 165 bits (417), Expect = 3.170e-40
Identity = 96/249 (38.55%), Postives = 147/249 (59.04%), Query Frame = 1 
Query:   16 SKDFSPEVDFAARGMTKTDFPGRYPYRDFGLKYWDAIDTWVKEYLDVYYSTDADITD-DYELQAFVNELVTVGEFKWLAE-WD-NSTDKKGLLAKVLASLIYSASTLHAAVNFPQKTTMSFAPSNPASVYVPPPTDKTERTFEDYLAYLPPLEIATRQVILFTFLGNVFYTTLGDYEAD-----QFSDKRVLAPLAKFQQALEDIETDMVDENAFVVSSWRKRGKGKRAAANFGYTTLLPEKVPQSINI 738
            S+D+SP+   A +GMT ++FP  +PYRD  +K W+AI TWV  Y+ + Y  D  + + D E+QA++ EL T G+ KWLAE W     +   LL  +++++I++AS  H AVNFPQ + +++ P+ P ++Y   PTD   +T   YL  L P+EIA  Q ++F  L +V++T LG Y         F  +      A+F+  L  I  D+   NA +V +W + GK ++ AA + Y  L P+K+PQSINI
Sbjct:  241 SRDWSPDAVLARQGMTASEFPHMFPYRDDAMKVWEAIKTWVAAYMHISYRDDHVLLERDVEVQAWIAELKTTGDVKWLAEAWGPKGHNNLPLLTHLVSTVIFTASAQHGAVNFPQLS-VAYTPAFPYALYSEIPTDGEPKTETQYLDLLAPMEIAKLQRVVFLLLSSVYHTRLGHYSHPLSFRRYFESRAARRAAAQFRADLARIGRDIDARNAALVDAWVEAGKPRKEAALWRYLHLHPDKIPQSINI 488
[Close]
BLAST of mRNA_Ecto-sp8_S_contig1095.1324.1 vs. uniprot
Match: UPI0018C4CE94 (lipoxygenase n=1 Tax=Nostoc sp. WHI TaxID=2650611 RepID=UPI0018C4CE94)

HSP 1 Score: 154 bits (389), Expect = 2.080e-35
Identity = 92/234 (39.32%), Postives = 134/234 (57.26%), Query Frame = 1 
Query:   49 ARGMTKTDFPGRYPYRDFGLKYWDAIDTWVKEYLDVYYSTDADITDDYELQAFVNELVTV--GEFKWLAEWDNSTDKKGL--LAKVLASLIYSASTLHAAVNFPQKTTMSFAPSNPASVYVPPPTDKTERTFEDYLAYLPPLEIATRQVILFTFLGNVFYTTLGDYEADQFSDKRVLAPLAKFQQALEDIETDMVDENAFVVSSWRKRGKGKRAAANFGYTTLLPEKVPQSINI 738
            +RG+        YPYRD GL  W+AI++WVKEY  +YY+TD  + +D +LQ + + L++   G  +   + D     K L  L K ++++I++AS  HAAVNFPQK  M + P+ P + Y+P P D  +   E+++  LPPL+ A  Q+ L   LG+++YT LG+Y A  F+D  V +PL KFQ  L+DIE  +   N+          KG R      Y  LLP  +PQSINI
Sbjct:  498 SRGVDDASKLPTYPYRDDGLLIWEAIESWVKEYFSLYYTTDKSVLEDQDLQTWASTLISNEGGRLQNFGD-DGQGHIKTLDYLVKAVSTIIFTASAQHAAVNFPQKELMMYTPAFPLARYLPAPVDPQQP--ENFINGLPPLDQALNQINLLYLLGSIYYTNLGNYSASAFTDPNVTSPLEKFQTNLKDIEQQINQRNS--------NSKGDRIIP---YEFLLPTNIPQSINI 717
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BLAST of mRNA_Ecto-sp8_S_contig1095.1324.1 vs. uniprot
Match: A0A4P2Q3W5_SORCE (Lipoxygenase domain-containing protein n=1 Tax=Sorangium cellulosum TaxID=56 RepID=A0A4P2Q3W5_SORCE)

HSP 1 Score: 153 bits (387), Expect = 2.740e-35
Identity = 97/249 (38.96%), Postives = 134/249 (53.82%), Query Frame = 1 
Query:   10 RISKDFSPEVDFAARGMTKTDFPGRYPYRDFGLKYWDAIDTWVKEYLDVYYSTDADITDDYELQAFVNELVTV--GEFKWLAEWDNSTDKKGLLAKVLASLIYSASTLHAAVNFPQKTTMSFAPSNPASVYVPPPTDKTERTFEDYLAYLPPLEIATRQVILFTFLGNVFYTTLGDYEAD----QFSDKRVLAPLAKFQQALEDIETDMVDENAFVVSSWRKRGKGKRAAANFGYTTLLPEKVPQSINI 738
            R+++ F P    A+RG+        YPYRD  L  W AI  WV  YL +YY++DAD+  DYELQ +  EL +   G  K + E D +    G LA +L  +I++AS  HAAVNFPQ++ MSF P+ P + Y P P+        +   +LPPL+ A  Q+ +   LG V+Y+ LGDY+ +     F+D RV  PL  FQ+AL +IE  +                GKR      Y  LLP ++PQSINI
Sbjct:  443 RVNQQFLPAA-LASRGVDDPGALPSYPYRDDALLLWGAIHPWVSRYLALYYTSDADVQGDYELQGWFAELSSPSGGGLKDIGE-DGALRTVGYLATLLTHVIFTASAQHAAVNFPQRSIMSFTPAYPLAAYAPAPSVAEGLPPSEIFRHLPPLQQALLQINVMMLLGGVYYSRLGDYDRNIPGAYFTDPRVREPLEAFQRALIEIEATI----------------GKRNLQRNPYVFLLPSQIPQSINI 673
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BLAST of mRNA_Ecto-sp8_S_contig1095.1324.1 vs. uniprot
Match: A0A6H5JK40_9PHAE (Lipoxygenase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK40_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 4.000e-35
Identity = 64/104 (61.54%), Postives = 80/104 (76.92%), Query Frame = 1 
Query:  106 LKYWDAIDTWVKEYLDVYYSTDADITDDYELQAFVNELVTVGEFKWLAEWDNSTDKKGLLAKVLASLIYSASTLHAAVNFPQKTTMSFAPSNPASVYVPPPTDK 417
            ++YW+A  TWVKEYLD+YY +D D+ +DYELQA + ELV + +  WL ++  + DKK  +AKV+AS IYSASTLHAAVNFPQK +MSF PS P SVY PPP DK
Sbjct:    1 MRYWEATHTWVKEYLDIYYESDKDVEEDYELQAMIKELVDIAKVYWLKDYYTTDDKKAFIAKVIASWIYSASTLHAAVNFPQKPSMSFVPSCPGSVYAPPPIDK 104
[Close]
BLAST of mRNA_Ecto-sp8_S_contig1095.1324.1 vs. uniprot
Match: UPI001CCD1CE2 (lipoxygenase n=1 Tax=Hyalangium sp. H56D21 TaxID=2861190 RepID=UPI001CCD1CE2)

HSP 1 Score: 152 bits (385), Expect = 5.550e-35
Identity = 102/250 (40.80%), Postives = 132/250 (52.80%), Query Frame = 1 
Query:   10 RISKDFSPEVDFAARGMTKTDFPGRYPYRDFGLKYWDAIDTWVKEYLDVYYSTDADITDDYELQAFVNELVTVGEFKWLAEWDNSTDKKGLLA------KVLASLIYSASTLHAAVNFPQKTTMSFAPSNPASVYVP-PPTDKTERTFEDYLAYLPPLEIATRQVILFTFLGNVFYTTLGDYEADQFSDKRVLAPLAKFQQALEDIETDMVDENAFVVSSWRKRGKGKRAAANFGYTTLLPEKVPQSINI 738
            R ++ F PE     +G+   +    YPYRD  L  W+AI  WV +Y  +YYS DAD+  DYELQA+V ELV+ G  + + E     DK   +A      K+L  +I++AS  HAAVNFPQ+T MSF P+ P + Y P P +  +       L  LPPL  +  Q  +   LGNV++T LG Y   Q SD R L  L KFQ AL+ IE  +   N            GKR      Y TLLP  +PQSINI
Sbjct:  458 RYNESFFPEK-LVRQGIASPEDLPDYPYRDDALALWNAIHGWVSDYTALYYSGDADVVGDYELQAWVQELVSAGHLQDIGE--GGADKTPCIATLDYLRKLLTQVIFTASVEHAAVNFPQRTAMSFTPAIPLAGYAPFPGSSASGAEATQLLDLLPPLNQSILQQAVLAGLGNVYFTVLGQY-GGQLSDPRALLVLGKFQCALQAIEKHIQAANTL----------GKRTL----YATLLPSAIPQSINI 689
[Close]
BLAST of mRNA_Ecto-sp8_S_contig1095.1324.1 vs. uniprot
Match: A0A4P2QUL1_SORCE (Lipoxygenase domain-containing protein n=5 Tax=Sorangium cellulosum TaxID=56 RepID=A0A4P2QUL1_SORCE)

HSP 1 Score: 152 bits (384), Expect = 6.610e-35
Identity = 95/248 (38.31%), Postives = 130/248 (52.42%), Query Frame = 1 
Query:   13 ISKDFSPEVDFAARGMTKTDFPGRYPYRDFGLKYWDAIDTWVKEYLDVYYSTDADITDDYELQAFVNELVTVGE--FKWLAEWDNSTDKKGLLAKVLASLIYSASTLHAAVNFPQKTTMSFAPSNPASVYVPPPTDKTERTFEDYLAYLPPLEIATRQVILFTFLGNVFYTTLGDYEAD----QFSDKRVLAPLAKFQQALEDIETDMVDENAFVVSSWRKRGKGKRAAANFGYTTLLPEKVPQSINI 738
            +++ F P V  A RG+        YPYRD     W AI TWV  YL +YY++DAD+  DYELQ +  EL +      K + E D +      LA +L  +I++AS  HAAVNFPQ + MSF P+ P + Y P P+        +   +LPPL+ A  Q+ +   LG V+Y+ LGDY+ +     F+D R+  PL  FQ+ L DIE  +                GKR    F Y  LLP ++PQSINI
Sbjct:  444 VNQQFLP-VALARRGVDDPSTLPSYPYRDDATLLWGAIHTWVSRYLAIYYTSDADVLGDYELQGWFAELSSPSGCGLKDIGE-DGAIRTVAYLANLLTHVIFTASAQHAAVNFPQSSLMSFTPALPLAAYAPAPSITAGLPSSEIFQHLPPLQQALLQLNVMMLLGGVYYSRLGDYDRNIPGAYFTDARIREPLEAFQRELMDIEATI----------------GKRNLQRFPYVVLLPSQIPQSINI 673
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig1095.1324.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K920_9PHAE4.200e-15696.75Lipoxygenase domain-containing protein n=2 Tax=Ect... [more]
A0A6H5KD72_9PHAE2.320e-13483.74Lipoxygenase domain-containing protein n=2 Tax=Ect... [more]
D8LBX4_ECTSI1.630e-10163.67Lipoxygenase n=2 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5JW78_9PHAE1.950e-7275.63Lipoxygenase domain-containing protein n=1 Tax=Ect... [more]
A0A836CEV5_9STRA3.170e-4038.55Lipoxygenase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
UPI0018C4CE942.080e-3539.32lipoxygenase n=1 Tax=Nostoc sp. WHI TaxID=2650611 ... [more]
A0A4P2Q3W5_SORCE2.740e-3538.96Lipoxygenase domain-containing protein n=1 Tax=Sor... [more]
A0A6H5JK40_9PHAE4.000e-3561.54Lipoxygenase domain-containing protein n=1 Tax=Ect... [more]
UPI001CCD1CE25.550e-3540.80lipoxygenase n=1 Tax=Hyalangium sp. H56D21 TaxID=2... [more]
A0A4P2QUL1_SORCE6.610e-3538.31Lipoxygenase domain-containing protein n=5 Tax=Sor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig1095contigEcto-sp8_S_contig1095:2..5329 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score454.5
Seed ortholog evalue2.9e-125
Seed eggNOG ortholog2880.D7G112
Model size2265
KEGG rclassRC00561,RC00839,RC02139
KEGG koko:K00461
KEGG ReactionR01595,R03058,R08527
KEGG Pathwayko00590,ko01100,ko04664,ko04726,ko04913,ko05145,map00590,map01100,map04664,map04726,map04913,map05145
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
EggNOG OGs28IFU@1,2QQSP@2759
EC1.13.11.34
Cds size684
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig1095.1324.1prot_Ecto-sp8_S_contig1095.1324.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig1095 59..3805 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143183.3781362-UTR-Ecto-sp8_S_contig1095:1..581681143183.3781362-UTR-Ecto-sp8_S_contig1095:1..58Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig1095 2..58 +
1681143183.4671926-UTR-Ecto-sp8_S_contig1095:3805..53291681143183.4671926-UTR-Ecto-sp8_S_contig1095:3805..5329Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig1095 3806..5329 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143183.3909035-CDS-Ecto-sp8_S_contig1095:58..1541681143183.3909035-CDS-Ecto-sp8_S_contig1095:58..154Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1095 59..154 +
1681143183.3988671-CDS-Ecto-sp8_S_contig1095:679..7271681143183.3988671-CDS-Ecto-sp8_S_contig1095:679..727Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1095 680..727 +
1681143183.407136-CDS-Ecto-sp8_S_contig1095:1324..14141681143183.407136-CDS-Ecto-sp8_S_contig1095:1324..1414Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1095 1325..1414 +
1681143183.4203687-CDS-Ecto-sp8_S_contig1095:1688..18141681143183.4203687-CDS-Ecto-sp8_S_contig1095:1688..1814Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1095 1689..1814 +
1681143183.4291823-CDS-Ecto-sp8_S_contig1095:2275..23791681143183.4291823-CDS-Ecto-sp8_S_contig1095:2275..2379Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1095 2276..2379 +
1681143183.437173-CDS-Ecto-sp8_S_contig1095:2889..29941681143183.437173-CDS-Ecto-sp8_S_contig1095:2889..2994Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1095 2890..2994 +
1681143183.4543226-CDS-Ecto-sp8_S_contig1095:3690..38051681143183.4543226-CDS-Ecto-sp8_S_contig1095:3690..3805Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1095 3691..3805 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig1095.1324.1

>prot_Ecto-sp8_S_contig1095.1324.1 ID=prot_Ecto-sp8_S_contig1095.1324.1|Name=mRNA_Ecto-sp8_S_contig1095.1324.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=228bp
MTKTDFPGRYPYRDFGLKYWDAIDTWVKEYLDVYYSTDADITDDYELQAF
VNELVTVGEFKWLAEWDNSTDKKGLLAKVLASLIYSASTLHAAVNFPQKT
TMSFAPSNPASVYVPPPTDKTERTFEDYLAYLPPLEIATRQVILFTFLGN
VFYTTLGDYEADQFSDKRVLAPLAKFQQALEDIETDMVDENAFVVSSWRK
RGKGKRAAANFGYTTLLPEKVPQSINI*
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mRNA from alignment at Ecto-sp8_S_contig1095:2..5329+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig1095.1324.1 ID=mRNA_Ecto-sp8_S_contig1095.1324.1|Name=mRNA_Ecto-sp8_S_contig1095.1324.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=5328bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1095:2..5329+ (Ectocarpus species8 EcLAC_412)
ACCCTGGAACGCATCTCCAAGGACTTCTCGCCGGAGGTCGATTTCGCTGC
TCGCGGTATGACCAAGACGGATTTCCCGGGAAGATACCCATACCGTGACT
TCGGGCTCAAGTACTGGGACGCCATAGACACCTGGGTGAAGGAGTACCTC
GACGTGAGTCAGGACCACCTCACCTTTGGCGACGAAGTGTCTGGTTACTT
GTTTTTAGGGCGTGAAGGAACCCACCTGTGTGTGCCGAAGGGTCAAACAG
TTCGATGGCGTTAAAACTTGATCAACATATGGTGTTGGTTTGATCGGCCA
CTGGTTCTGTTGCAATGTGGCGACACTTGTTACCCCCACGACGTGACGTT
CACCGTTTGGTTGTGGATGGAGTAAGCGTACCATATTGCGAATTCTACTG
TCTTTCGCTGGTCGTATTCGCTTTGACGCTTCCCTTACGCACAAGCCGGG
TTTCAAGTGTGTTATTTTTTTTGCATCGAATGAACGAGGTCGTTGCGTCT
GAAGAGAGCATGCTTTACCCACTAAGCAACTTCTGCTCGTGGTTGCTTGC
AGTGAGAAACCTTCCCGTGCGTTTCGCGGGTCAGACACGTAACTTCAGTC
TGCAACCCCAACAACTCAGTTATTGTTCCATGTACCGTTGCTTCGCAAAC
TTTTGCCTGTTTTTGCCTGACTCATCAGGTGTACTACAGCACCGACGCGG
ACATTACCGACGATTACGAGCTGCAGGTGACACTTGAAACTCTTCGTCCT
TTGCCATCGCGAGCGTTGGTGCGGTTCGATAGTGTTGAAGCCGTTTGTAC
GGGCTCGTTCTAACATGTGTTTGGGCTAGGCGGTTGTGCAGCCTTCACGT
CCAGCGCGCGCCCGCACTACAATCCAAAACCGGGGCTTCGATCAACTGTG
AACTAAAGGAGCTTGAAGGTTTAGTAAGGGGATGGGCACCAGCAATGGGG
TAGATGATAGAGCCGCCTTTGCTAACTGACGAGTAAATTCCGTCTTGTTT
GGTTGAGTTTTAACGTGTGCATGACGACGCCATCTGATAACGTACACCGC
TGCCGGTACCCGAGCCCGACACTTCCGATGCTGCGACCACCTTACACGAC
CCTACCCTCTGTCCCCGCCGAGAGTTCGTGGACGAACGGGTGGGCAAAAG
CAATCGCCTGGATGTCGAGGATAGTGCAATATTTAGAGGTGGCGAAGAAG
CATCTCTCTGAGATTGGATCTCGCTTTTGACTCCATGTTGGTGAATACTG
TGGAAGGTGAACATAGCCAGGAGTCGTACGCGCTTAACAGGGGCGTACTT
CCCTCCCCCCATCACCCTCGCAGGCGTTCGTAAACGAGCTCGTTACCGTG
GGAGAATTCAAGTGGCTCGCGGAATGGGACAACTCCACGGACAAGAAGGG
CCTGCTCGCTAAGGTCCCCCATCGAGTGTTGTTGCTGCTGTTGTTTTCTT
GCTGCTGAACAATGATCTGTGACCTTTGCACGACGTGTGTCAACAAATCC
TGTTTTGGAATATTTCCACTACGCCGTCACGCCGGTGACAACCCTCTCAA
CGCGACCAAGTCTTGTGCTGTTTTTTTTACGGCTCGCTCTTGGAGACTCT
CAAGTTGCGGTCCGTCGCTGGCGGGGTGTCTTGTGTTGGTGTACCGGTTT
CCGTCCTGAGGTTGTACTCTTTTGTCGCATGTCACAGGTACTGGCAAGCT
TGATCTACTCGGCGAGCACCCTGCACGCCGCGGTCAACTTCCCCCAGAAG
ACCACCATGTCCTTCGCGCCCAGCAACCCTGCTTCGGTCTACGTGCCACC
CCCCACCGACAAGGTAACGGCGGCACGGGATATTGGAATCGCAGGATAAG
TCGGCACGGTTTCGCGATGAAAATCGAAGCATATTTTTTCAAGGGTGTGT
TCGGTAAGGTACGGGTACGCTCAGTAGGGTACGAAAACTTACCGAAGCGT
ACCGAGATTTCGGTAACGTTTGGAGGCGTGTACCGAGAATTTCAGTGGGG
TATGAAGCCTGTACCGAAGCATACCGAGGCTCTCCGCAGGGCATATACCG
CCCGTACATACCGGAAGTATGCCTCGGCACGTACCGTCGAACACGCTCTT
TATTGTGTGTAGGGTATGCACGGTAGGGTGTGAAAAATTACCGAAGCGTA
CCGAGACTTCGGTAGGGTATGCAAGCCTGTACCGGAGTGTATCGAGACTT
TTGGTAGGGTATTTTCCATGCAGCGAAGCTGCCTGATGTCGACACCTCGA
TGATTGTCACCATCTGTTTTGCAGACGGAGAGGACGTTCGAAGACTACCT
GGCCTATCTCCCGCCCCTCGAGATCGCCACAAGGCAGGTCATCCTCTTCA
CCTTCCTCGGCAACGTCTTCTACACAACGTGAGTCAGTCCGAACCCTCGA
TCCCGGGCCTAAGAACAAACCACAACTTACTTTGGGTAAACCAATTTGCT
GCACGGTTTTCTTTGTACCAAGCTTTCTAGGCCGAGTTGGAGCAAAAGGG
GTCAACACCTGAATATTTCCCCCCAAGTGCTCTTGTTGCTCTGCGCTCGC
ACCACAATTGCATACGGCCGGTCAACCTTCAGGCGACGTTCGGCGAACAT
GCCCTCGCCTGCTGAGGCTACCAATGCGCTGTTATTGATAGACCCGTGTG
AGAAGAACCGAGTGTACTGGCTTGTGCCAGCAAATGTCAGGAAGTGCTCG
ACATCACTACGAAGGCGGCAAGGCCGGCACGGTTGATTGTGGAATCTTCA
GTCATTGCTAGACAACACGCGGTATGTTGCTGCCCTCTAACGTTCCACTC
ACGCCTCTGGTGTTGTTGCGCTCTCCCGCACATTTTACACTCTTGCCATC
AAAATGCGATGACCGCTGGGGGGAACGAACGATTAAAGGCTGGGCGACTA
CGAGGCGGACCAGTTCAGCGACAAGCGTGTGCTAGCCCCACTGGCCAAGT
TCCAACAGGCACTCGAAGACATCGAAACCGACATGGTGGACGAGTAAGTC
GGCTAGCCAAGCCATATGGCAAAATAGTCTACAACCTATCTACAGTCCAC
AGTGCCAGACACACCTCTCATAAAGGAGGTGCCACTTGGGTTGACGCTAG
ATTCTACAGCCAAGAGGTTCCGATCGCACAACAATTGGCGAAATTTGACG
TCATTTTCTAGGGTCCTGCAAACTTGACTCGGGTTGTAGAATGTGTGCCG
ACAACGGGAGGGTTTCGCTGTGCCGGGGACTCCCATGTGATTATGCGTTG
TTACGTATTGGCAAGGAGAGTACCTCGGCAGGAGTCAATCCTGGTTTCGT
TCCTTATTGAGAAACGGCGCAGGCTTCACCATGTACAGACTTGGTCTCCC
TTCTGGAAGTTGAGCTGTCTGATCTAAGTTGACTAATTCGCGTCGCAATA
CTTGATCTACACCCACGGCGAACATGACGTTCGCGATGTGCATGCTGAAG
AGCGTACCAGTTGATGCTCCATGTGAACCCCGACTGTTTATGCTGTAGTT
TATATATGCAACACAATATGTGTACCCTTTCCGTTCAGCGACGGGCGCGC
ACACTGGTCGATAAATACCAAACCCGACCGGGGCGCCGGCGCTTCCTTTC
GTACGATAATATCTCGTTCGACTGGAATTTTTGTCGTGAATGGCGAACAA
CCTTCCCCCTACTCGCCGCCAAAATCCAATGCCTGGCAGGAACGCCTTTG
TTGTGTCTTCCTGGCGCAAGAGAGGCAAGGGCAAGAGGGCCGCCGCCAAC
TTCGGGTACACGACGCTGCTTCCCGAGAAGGTCCCGCAGTCCATCAACAT
ATAAGATAAGATAAGATAATACCTACGGGTACACATGTAGGTGCATGCGA
GGTGCAGTGGAGTAGAAACTGTGGAGTGGAAACTGTTTGCATTTGTTCGG
TCGGTTTGATGTGGGTGGTATTGCCAGGGCATGCTGATACGGGCTACACT
TAGCATGACAACCCCGACCGTGCCGATATATACTCCGACGCACTCGTGTG
GTTTCTGTTGACAATATTTCGTTATAGTAGCAATAGCAGTAGCAGTAGGC
TTCCCCCCTGTGTCGTGATAGTCACTCACGGTTGCTTTGTCGAGTTGAGT
TGAGAGGTTGACAGAGGATGACTCACGTACACAAGGTTGCAAACGATGGG
GGAAGGTAGGAGGTGGAATGAATGACTGTCGTTTCAGAGTCAGAGTGATG
CTGCGTTTTGTCGAGGGGCGAGCAATTCGGCTTGGGAGTTGTGGGGGGAC
AGAGATTCACGCGAGTCCTGTCAATTGTTGAACGCTGGTGTCTGTCGGCC
CATACCATAGAAGAAGTTGATGCAGTGGTTGTGTTTTCGATTTTTTGTTA
CTTCTTGCAATCGATGTGTTGTTGATCTATCAACGAGACAGGTCCTGCTC
TCTGGTGTAGTGTGGCTCAACTTGTGCGAGTTTAGACGTTCCCCAAGGCC
GACAAGCGTAGCGATATCTTCGTCTGGCCACCCTGATTATTTGCTGCGTA
TCATGCCTGGTCACATGCGTGCTTCTATTGGACGCATCCAAAAGACAAGT
GCACTCGGTTTGCAAGTTGAGCCAAAAGGGTATATCTCATTCCTGATTTT
GGTGTAGTAACATTCGCGAGGAGAGAGTTGCAAATGTTGCGGCCGAGTGA
AAAGGGTGCCCGAATGTACAGTATTGAGGTGACACCGACGGGCACTCGGG
GAGGTATCATAGGCCTTTATTGCTAATCAAGAATAATAGGCGGGTCATCT
GCGCCCACGGGGGGCGAGGGGTACGTTGGGACTCTTATTGTAAAGAAGAA
AGCCATCTTTGGCGAACTGCTATGCTACAGGGGCAACCTGTAATGGCATG
TCATGGGGGAAGACCGGCATTGCAGGAACTCGTGCCAATCGTCGCGTGTG
ACGGTTGTGAGATCTGTTTATCGGACGTCGTGCAGTGCATGAGCCCGGGT
CTGAGATCGTTTGGAGCACCTGAGGCTTCCTATTGGCGGGAGCGCCGTCG
GTCCCGTGGGTTGCCGATCTCCTTGCTCGGGCCATCGCAAGAGCTCATGG
CAAAGGGATGTCACGGATAATGGTGATGACCCAGATGAGACATACCGCGG
GTAGTCCCAAGTACCAGGCATGATCAGCCTGAACGAGTGAACGAGACGAT
GGAAGCGAATCGGTCGGCCAATGTAGTGTACCGGCTTTCTTTCGAGACGG
TGACATCAGGGTCGAATGAACATAAAACCTCACCATGTTTTCCTCGCCGC
CCGCCTACCCAAACCGCTGCTTTAACAAGGACCTATGTACATTTCAGCAC
GAAGAAACGAAACAAGACAATTGAGACC
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig1095:2..5329+

>mRNA_Ecto-sp8_S_contig1095.1324.1 ID=mRNA_Ecto-sp8_S_contig1095.1324.1|Name=mRNA_Ecto-sp8_S_contig1095.1324.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=684bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1095:2..5329+ (Ectocarpus species8 EcLAC_412)
ATGACCAAGACGGATTTCCCGGGAAGATACCCATACCGTGACTTCGGGCT
CAAGTACTGGGACGCCATAGACACCTGGGTGAAGGAGTACCTCGACGTGT
ACTACAGCACCGACGCGGACATTACCGACGATTACGAGCTGCAGGCGTTC
GTAAACGAGCTCGTTACCGTGGGAGAATTCAAGTGGCTCGCGGAATGGGA
CAACTCCACGGACAAGAAGGGCCTGCTCGCTAAGGTACTGGCAAGCTTGA
TCTACTCGGCGAGCACCCTGCACGCCGCGGTCAACTTCCCCCAGAAGACC
ACCATGTCCTTCGCGCCCAGCAACCCTGCTTCGGTCTACGTGCCACCCCC
CACCGACAAGACGGAGAGGACGTTCGAAGACTACCTGGCCTATCTCCCGC
CCCTCGAGATCGCCACAAGGCAGGTCATCCTCTTCACCTTCCTCGGCAAC
GTCTTCTACACAACGCTGGGCGACTACGAGGCGGACCAGTTCAGCGACAA
GCGTGTGCTAGCCCCACTGGCCAAGTTCCAACAGGCACTCGAAGACATCG
AAACCGACATGGTGGACGAGAACGCCTTTGTTGTGTCTTCCTGGCGCAAG
AGAGGCAAGGGCAAGAGGGCCGCCGCCAACTTCGGGTACACGACGCTGCT
TCCCGAGAAGGTCCCGCAGTCCATCAACATATAA
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