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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 0 |
| Model size | 350 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Ec32 ortholog description | Hypothetical protein |
| Ec32 ortholog | Ec-08_006700.1 |
| Cds size | 348 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681143181.7220168-CDS-Ecto-sp8_S_contig10927:1513..1723 | 1681143181.7220168-CDS-Ecto-sp8_S_contig10927:1513..1723 | Ectocarpus species8 EcLAC_412 | CDS | Ecto-sp8_S_contig10927 1514..1723 + |
| 1681143181.7298126-CDS-Ecto-sp8_S_contig10927:6332..6408 | 1681143181.7298126-CDS-Ecto-sp8_S_contig10927:6332..6408 | Ectocarpus species8 EcLAC_412 | CDS | Ecto-sp8_S_contig10927 6333..6408 + |
| 1681143181.7370179-CDS-Ecto-sp8_S_contig10927:6433..6495 | 1681143181.7370179-CDS-Ecto-sp8_S_contig10927:6433..6495 | Ectocarpus species8 EcLAC_412 | CDS | Ecto-sp8_S_contig10927 6434..6495 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10927.1302.1 >prot_Ecto-sp8_S_contig10927.1302.1 ID=prot_Ecto-sp8_S_contig10927.1302.1|Name=mRNA_Ecto-sp8_S_contig10927.1302.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=116bp
ISLSLFPEPRAPPRVGLIYKYPLHDTQTLDPPQDSTDREAAATGAAGKEK
GEERSTKKSEVRVVRAQQHQVSRRETNNRTCIAQSHERPAHPIPSRRERR
ERRERAKRPSAYGVA* back to topmRNA from alignment at Ecto-sp8_S_contig10927:1514..6495+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp8_S_contig10927.1302.1 ID=mRNA_Ecto-sp8_S_contig10927.1302.1|Name=mRNA_Ecto-sp8_S_contig10927.1302.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=4982bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10927:1514..6495+ (Ectocarpus species8 EcLAC_412)
ATCAGCCTCTCGCTTTTCCCTGAACCAAGAGCGCCACCACGCGTGGGGCT
CATTTACAAGTACCCTCTCCACGACACACAAACCCTTGATCCACCACAGG
ATTCAACCGACAGAGAGGCCGCAGCCACAGGGGCAGCAGGAAAAGAAAAG
GGAGAGGAGAGGTCGACGAAGAAAAGCGAAGTTCGAGTAGTTCGAGCCCA
GCAGCATCAGGTACGCGAGAGAGAGGTTCTTGTTGGTGCCTTGAGCTTTG
CCCTACCCAACCCTCCCTAAGGGAAGGCGCACGGGAAGAGGCAGCACTTT
GTAGAGCATGCCTCCTGTTGATGGGAGAATGAGTGATGGGGTAGCGCCTA
CGTCACAGCAGTGGCCGTCCCCAAGTCCAGGGGCCATTGTCTGTTGTATG
TCTTCAAAAACTCCAACCAAGAGGCAGAGCTTACACAATAAAATAGCAAG
CAATCAGCGAGTCACCAGGGCCTTTTTCTGGTTCCTGTTTCTCGCTCTGC
ACCCACCCACCCACACCACCGCTCTCTTCTTGGTAAAGAGCGTGTAGGAA
TCCTAACCTCCCAACCCTGTCATGCACACATGCACGGGGTACTAGAGCAC
TAGAGCCTGCCTGCACAACTTCTTTCCGCGCGCCCCACACACAATAAACA
TTCCTTCGCTTTTTTTTTTTTGCGCAAAAGGCCTGTACCGTAGGTCGCGA
GTCAGCGCACAGGGGTGCGAGCGATGTTCTAAGCGTAATTTCTCCACAAC
CAGGAGGTTACCACTGCTGTCGAAAGGGGCGGTTTCGGAAATATCTCATC
GATAGCTTTCCTGAGAAGTATCAGTTGGCGCTCGCACCCCTCTGGCTGTG
GAGAAATTACGCTTTGAAAATCGATCGCACCCCTGTGCGCTGACGCGCAA
CCTTACGGTAAGCGGGTCACTGGGTCGACGCAGCACCAGTTCTTCGTTCT
TCTGTTCGTGTCACCGCAGTATGTATCAGATCAAATGAAGCGGTAATAAT
TTTCGGACAGAAACAGGGGGTGCGTTTTTGCTCCGCTGCTGAGCTTAATG
TCCCGCTGGAACATACTTGTGCCTAGCAGAGAGACATTAGGCACCCGGCT
TTTTTTTGTCCGATGCGATTCCACCCTCTCGTACCATGTGCCACGACCTG
CCTGTCCTGACTAGCCTACACATGATAATTCTCGGGTACATACCAGGTAC
ATACGTACTATAGCGTAGATGTATTCTACCACCATACCACCGTCCGTTGT
CTTTTTCAGTACACTTACATATTTTGGGGCAAGCGGCGGAGCGGCGGACC
GCTTAGACCGCGAGCCTGTTTTGTGCCCTTCACCAGATACTACTTCGAAG
GTGCTATTATAGGGTGTTTTGTGTGTTGTTTAGGTATGCAGTGTGTGCCT
GCCGTCTCTTTCGATGGGCTGGCGCTGAGTGGCGACCCTCGGCTGAAGGG
GACCCGAAGCACTACTCAGTCAATGGAGGGATGGGCCAGATGTATGATAT
GTAGCCTTAAGCTACCTGCTTCACAAAATTTGGGGTTCTAAAGAAGATGG
ATTAGACTACATCCGGTAGTTGTGTTGTGGTTCCGTTGCCAATGCATGTT
AGAGGGTCGAAACCGGTTGTCGCAGGCCCGACCCGCGGTATGTACAAGAG
GGTTTTTATTTTTATAGAGACCGGCCCCTTTATGATGGGCTGACCGCACT
ACTATAATAAATGCGGAGGTGGAATACCTTTTTTGTGGAAAAAAGTACCT
GCAGTAGGCTCTTGCGTTGTTACCATTGGCTCGTTTATGCAATACCATGA
CACAGCAGCAGTGTTGAGTTTGGGGGCGCCAGTCGGTGTGATTTACAGAT
TTTCAGAGAGGGGGGGTGGTGTTCATCATCATCAGCTAGAGAGGGGGGGT
GGTGTTCATCATCATCAGCTAGAGAGGGGGTGGTGGTGTTCATCATTATC
AGCACTACAATAGAGGGGTGGTGGTGTTCATCGTCAGCTTACTGTTGCTT
TGTTTGCATTGAGGCAACTCAACACCACGTGATGGGTGACCAGACTATTT
AACTAATATTTAGCAGGGTGGGCACAGATACCCTCGCACCCAAGCATGAG
AGGTGTACAGCAGTATGTGCATGCATCGTCAATGAATGGTGGTGTCTACA
GCGGTAGTAGCGCGTTGTTGGTGACGATGTGCCTCTCTTTCGAACCAATC
AAGATCGCTGCCGAAAAAAAAAACGAGCGCGGTTGAATCGCGACCCAACT
TTGTTTGTTCTCTTCTCTCGCTTCCTCCACCGCTAGCGAACAACAGGATC
GTGTAGGCGACACACCCCCTCTCGCACGTAGGTGTAGGCAGCACAGCAGC
AGTACATGCATCGTCGATGGCGGTGTCTAGGAAACGAGCGTGTGTTGTTG
TGATGTGCTTCTCTCTCCAAGCCCACTGCCGCTTGCTGCAAACACAGGAA
CAACCGGTGCCGGGACCCACCCAAACCAAACGTGTATCTCTCCCTTCGCT
TCCTTCGCCGATAGCTAGCAGCAATAGTACAGGGCACACCCTGCTCCCGT
CTCGCTCTCGCCGTGGTATTGTGTCTCCCTCCCCCTTTGTCCATGTCTTG
CTCCGGGTGATGATAATGTCTGTTGCGTGAGACTACTTACGTAAGTCTGG
TTCCAAACAAGCCTCCTCCTCCACCTCGGAGACGCATCAATCCAACATGT
ATGTATGTCGACTGAGATGCCGTGCTATCTCGACGCACCGACCACGGAAT
GAAAAGATTGCAGTTGGGACAGCTCGGGCAAATGCTAGTTGTTGTGGCCA
AGTCTTGGATTGCAAATTTGGTGCCTAGATGGTGAAATGTGCTCCAACCT
CCTGGGTATATATCGCGGCACAGACAGAAAGAGGGATGCTGGATACACTT
GCGAAAAAAGTGCCTCACCCGTGCGAGACATTTCTTTTTTCATCACGTAC
GTACATGTACATCACCATCCCCTAATCAGCTTTTTTCGTGCTAAGGCAAA
AACTAACCCTCTATCAGCCCGCCCCAAAAAAATATGAAAACGGGCTTAGT
CAGCTCAGGACTGCACCTCTTCGTGACTTCCTCGGCTCCTTCACACACGC
ACAAACGCACACACACCACAAGATAGCCGGTTAGCGCGGTCGATGCTGAT
AAGAGAAATATTTCAACAGAATAGCAATTCATGCACCACATTGCGGCACC
CACACCGACCCGGCAACAGCAGCATATATACTATGCCATGCGCGGCTGGA
GAAATGTGTCGTACCCAGCAGACGAAAGATTGAGCCCTGGATAGGTATGT
GTGTCGCGGAGGTTGTGTTTGTGCGGGCGGCTTCACGCATGATGAATGCT
GTGGTAAATAATGTGTTTTCAGGAGGCCTAACCTTTCGACGACGGGCTAG
AACTGCTCGATACCACGATGGCGACGATTGCACTGGGCGGGGGGAACGTA
CGCTGCTCTATAATATATTTTGGCCCGCTGGCGCACTGCGCGGGGTCGTC
TGGCAATCACAGCAGTCACAATGTACAGACAGTTTTTTTTTTGCGCAAGG
CCATAGTGATGTTGTTCCTTTCAGCGTACGTTTCGAAACCACCATGGCAG
GCAGACTTCAGGGACATATCTTAAATGTAAGCAATGCGTATGCTCATACA
TGTACAGGCTTGACTCTGGCACTACAGCAGTAAGACAAGTGTGCGGCAGG
CGGAGGTTGGTCTCTCTTGTTGTGCGACAGACATAATATAATGGTTGTAG
CCCGTGTTGAAGGAAATGTCTTCATTGCCGGGGAGGTCGTCGAGGCTTTG
CTGCTACATGTTGGTTTCGCGCTTTGCTTTCCATTGTTGTTTCGATTCTT
TATGCGTTCGAATGCATGTGTGCCTGTGGTTTGCCTCGATTCAATGGCTG
AAGCGGCGTTTTTGAATGCAGCAAGGTGCATCACTCGTTGACTGTTGAAT
CGAATCGAACTCAACACCGAAACAAAAGCGTTGCCGACACGATCACAATC
CATCGCCTAGCTTGCTCCACCACTTCCACCACACGTACATGCATATACAG
TCCACCACACACACATATGCATACATGTGTACGGCATCCTGACTCGGGGA
CGGACGATGCACTGTTGTTTCTCGTTACTCCAGATGTTTCCTTTATAGGA
GGCAACCCACTGTATAGGACCCCGATATATCAGGGTAAGTAACCCTCTTA
CTTCGATATAGCAGGGGGTTCGATATAAGAGAGGGTCGAGGGCCGTTGTC
ACACCACCCTCTTAAAATGGAACCATGTGTACCACAGTATGGATACAGCA
GTCAATACTACTGCAGGTACAAGATATATGCTGTTGTAGAACTGTGTGAC
TCGGTGTCCTCGCTGTATGTACAGCACCTTGTTGATCATCATATTTGCTC
ATCATGTGTCGACTCTCTTCAACCAGCTGCCTGAGAGTGTATTTGCTTGG
TCTCTCATAAAACCGTCGTTGTTTAGAACGGTAGGTCAGGTCCACATCTC
GACAGCTACTAATTACCGCTGTATGGTTCTTTCCCCACCCACACCGCCAC
CGGCCTTTTATTCATCTCTCTTAGAGCCGAACTGCGTGATGGTAGAGTTA
TTGCAGCTTGTATTTTGTTGGATGCGAAATGTGTCAATCCCGGTTTTTAC
GTTTTTTTTTTTTTCTGGAGTTGGGAACAGCAGCAAGCAGTGTGGTGTTT
CATCTCCATGAGTTGCATGTGCATCCAAATATTGAAGCTAGGAACCAACT
TCCGTCCCCCCTTTCGTGCTCCATTTTAACGGCATCGACGTCACCGCACT
GCCTCAAATTGTTGTACAGGTATCTAGGCGAGAGACAAACAACAGGACCT
GCATCGCTCAATCGCACGAACGTCCAGCCCATCCCATCCCATCAAGTCTC
CTCCCCTGCGAGGCCAGAAGGGAGAGAGAGGAGAGAGAGGAGAGAGAGGG
CGAAGAGGCCCTCGGCATATGGCGTTGCTTGA back to topCoding sequence (CDS) from alignment at Ecto-sp8_S_contig10927:1514..6495+ >mRNA_Ecto-sp8_S_contig10927.1302.1 ID=mRNA_Ecto-sp8_S_contig10927.1302.1|Name=mRNA_Ecto-sp8_S_contig10927.1302.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=348bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10927:1514..6495+ (Ectocarpus species8 EcLAC_412)
ATCAGCCTCTCGCTTTTCCCTGAACCAAGAGCGCCACCACGCGTGGGGCT
CATTTACAAGTACCCTCTCCACGACACACAAACCCTTGATCCACCACAGG
ATTCAACCGACAGAGAGGCCGCAGCCACAGGGGCAGCAGGAAAAGAAAAG
GGAGAGGAGAGGTCGACGAAGAAAAGCGAAGTTCGAGTAGTTCGAGCCCA
GCAGCATCAGGTATCTAGGCGAGAGACAAACAACAGGACCTGCATCGCTC
AATCGCACGAACGTCCAGCCCATCCCATCCCATCAAGGAGAGAGAGGAGA
GAGAGGAGAGAGAGGGCGAAGAGGCCCTCGGCATATGGCGTTGCTTGA back to top
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