mRNA_Ecto-sp8_S_contig10921.1298.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10921.1298.1 vs. uniprot
Match: D7G210_ECTSI (SET domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G210_ECTSI) HSP 1 Score: 927 bits (2396), Expect = 0.000e+0 Identity = 506/605 (83.64%), Postives = 522/605 (86.28%), Query Frame = 3
Query: 933 MIAEPGPEDQDVTPLLSFRKDGSTVAAAAKVDLRLETCSIRPAAVTLGALCMADAKAPKVAGASSQPELEDDFVAAIKGETAGEAAFRTSPPAPPLTLESTITVDTGSPKTVLRLAPPPAQHGPKTAAPALPSCPRALPREVFTYAENQAPTCSSPPAPKVLSAVVPAHANGGPPT-------------------------TIPSTPCSASSAVDRSTAIVALTDREPIGPLPSAXXXXXXXXX---EQSSTDVCPVPADVPGDWWHGSAAGAHPKGAEAGKGTSASLLQRSTVDDNDRHDTCQVPASLKPLLLLEYGAASWWRQEGEICLRSPEDDGGETSEERDTVAGRYGKNVEDGGDMGGDGGRSEEAASCEALTALEVLEAAEGFLPHKATCPAELLVDKARLATPTTRALATMPTTSCLPAAIEDLFPRPAGQVCHAKEDEQATGDDGNRGDFDAKSDDDDHRAENEDDRSTGLETLVREFNAWTRTVDFPIRKVEAGLIGNGMRLGLVATEAIPQGQSYLSVPGSIVLDASKARTDPELGPPLSRLEASLGPLGLWDQDTDSLRVLLIAETFVRADLSPWAPYLRLLPTPSEMEVYHP 2663
MIAEPGPEDQDVTPL SFRKDGSTV AAAK+DL LETCSIRPAA+TLGALCMADAKAPKVAGASSQPE DDFVAAI ETAGEAA SPPAPPLTLESTITVDTGSPKTVLRLAPPPAQHGPKTAAPALPSCPRALPREVFTYAE QAPTCSSPPAPK LSAVV AHA GGPPT IPST SASSAVDRST +VALTDREPIGPLPSA EQSSTDVCPVPAD+ GDWW GSAAGAHPKGAEAG+GT+AS RS V+D+DRHDTC VPAS KPLLLL YG S RQ+ EICL SPE DGG+T EE DTVAGRYGKNVE GGDMGGDGGRSEEAASCEALTALEVLEAAEGFLPHKATCPAEL VDKARLATPTTR LATMP TSCLPAA EDLFPRP+GQVCHAKEDEQATG DGNRGDFDA SDDDDHRAEN+DDRSTGL+ LVREFNAWTRTVDFPIRKVEAGLIGNGMRLGLVATEAIPQGQ+YLSVPGSI+LDASKARTDPELGPPL+RLEASLGPLGLWDQDTDSLRVLLIAETFVRADLSPWAPYLRLLPT SEME YHP
Sbjct: 1 MIAEPGPEDQDVTPLPSFRKDGSTVTAAAKMDLGLETCSIRPAALTLGALCMADAKAPKVAGASSQPESGDDFVAAITRETAGEAALCMSPPAPPLTLESTITVDTGSPKTVLRLAPPPAQHGPKTAAPALPSCPRALPREVFTYAEKQAPTCSSPPAPKALSAVVAAHAKGGPPTRAMLPFFALPAPDVCKEKEESQTAEAIPSTTSSASSAVDRSTDVVALTDREPIGPLPSAPSEEDEDEKPSAEQSSTDVCPVPADLRGDWWRGSAAGAHPKGAEAGEGTTASFPPRSAVNDDDRHDTCTVPASSKPLLLLGYGDGSS-RQQEEICLLSPEGDGGKTREEGDTVAGRYGKNVEGGGDMGGDGGRSEEAASCEALTALEVLEAAEGFLPHKATCPAELPVDKARLATPTTRPLATMPMTSCLPAAEEDLFPRPSGQVCHAKEDEQATGGDGNRGDFDANSDDDDHRAENKDDRSTGLKALVREFNAWTRTVDFPIRKVEAGLIGNGMRLGLVATEAIPQGQTYLSVPGSIILDASKARTDPELGPPLARLEASLGPLGLWDQDTDSLRVLLIAETFVRADLSPWAPYLRLLPTLSEMEAYHP 604
BLAST of mRNA_Ecto-sp8_S_contig10921.1298.1 vs. uniprot
Match: A0A6H5L5J3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5J3_9PHAE) HSP 1 Score: 902 bits (2332), Expect = 0.000e+0 Identity = 524/775 (67.61%), Postives = 542/775 (69.94%), Query Frame = 3
Query: 681 MLDTIATAGPTTALWVEPETEVPLHELPLCPTIRPPAIFSQARTESACARDPAGGETPPLARFGDVGQCLPSDGGVCPAVSWETMIAEPGPEDQDVTPLL-SFRKDGSTVAAAAKVDLRLETCSIRPAAVTLGALCMADAKAPKVAGASSQPELEDDFVAAIKGETAGEAAFRTSPPAPPLTLESTITVDTGSPKTVLRLAPPPAQHGPKTAAPALPSCPRALPREVFTYAENQAPTCSSPPAPKVLSAVVPAHANGGPPT-------------------------TIPSTPCSASSAVDRSTAIVALTDREPIGPLPSAXXXXXXXXX---EQSSTDVCPVPADVPGDWWHGSAAGAHPKGAEAGKGTSASLLQRSTVDDNDRHDTCQVPASLKPLLLLEYGAASWWRQEGEICLRSPEDDGGETSEERDTVAGRYGKNVEDGGDMGGDGGRSEEAASCEALTALEVLEAAEGFLPHKATCPAELLVDKARLATPTTRALATMPTTSCLPAAIEDLFPRPAGQVCHAKEDEQATGDDGNRGDFDAKSDDDDHRAENEDDRSTGLETLVREFNAWTRTVDFPIRKVEAGLIGNGMRLGLVATEAIPQGQSYLSVPGSIVLDASK--------------------------------------------------------------ARTDPELGPPLSRLEASLGPLGLWDQDTDSLRVLLIAETFVR-----------------------ADLSPWAPYLRLLPTPSEMEVYHP 2663
M+DT ATAGPT +LWVEPE EVPLHELP P RPPAIFSQARTE CARDPAGGE PPLARFGD GQ LPSDG VCPAVS ETMIAEPGPEDQDVTP L SFRKDG AAAAK+DL LETCS+RPAA TLGALCMAD K PK STITVDTG PKTVLRLAPPPAQHGPKTAAP LPSCPRALPRE FTYAE QAPTCSSPPAPK LSAVVPAHAN PPT IPS CSASSAVDRS AIVALTDR+PIGPLPSA EQSSTDVCPVPADV GDWW SAA AHPKGAEAGKGT+ SLLQRS V+ +D HDTCQVPASLK LL LEYG AS WRQE EICLRSPED+G ET+EE DTVAGRYG NV+DGGDMGGDGGRSEEAASCEALTALEVLEA EGFLPHKATCP EL VDKA L TPTTRALATMPTTSCL AA+E PRPAGQVCHA+EDEQ TGDD NRGDFDA SDDD HRAENEDD STGL+TLVREFNAWTRTVDFPIRKVEAGLIGNGMRLGLVATEAI QGQ YLSV GSI+LDASK ART+PELGPPL+RLEASLGPLGLWDQD DSLRVLLIAETFVR + LSP APYLRLLPTPSEME YHP
Sbjct: 1 MVDTTATAGPTNSLWVEPEKEVPLHELPFSPAARPPAIFSQARTEPTCARDPAGGEAPPLARFGDGGQYLPSDGRVCPAVSRETMIAEPGPEDQDVTPTLPSFRKDGPMGAAAAKMDLGLETCSLRPAAFTLGALCMADVKPPK----------------------------------------STITVDTGGPKTVLRLAPPPAQHGPKTAAPTLPSCPRALPREAFTYAEEQAPTCSSPPAPKALSAVVPAHANEAPPTRAMLPCFALSVPDVCKEKEESQTAEAIPSMTCSASSAVDRSNAIVALTDRKPIGPLPSAPSEEDEDDKPSEEQSSTDVCPVPADVRGDWWRCSAARAHPKGAEAGKGTTPSLLQRSAVNSDDGHDTCQVPASLKSLLFLEYGVASLWRQEDEICLRSPEDEGDETNEEGDTVAGRYGNNVKDGGDMGGDGGRSEEAASCEALTALEVLEA-EGFLPHKATCPVELPVDKAPLDTPTTRALATMPTTSCLLAAVEGFLPRPAGQVCHAEEDEQPTGDDENRGDFDANSDDDYHRAENEDDSSTGLKTLVREFNAWTRTVDFPIRKVEAGLIGNGMRLGLVATEAIRQGQPYLSVSGSIILDASKVKLCPGVLAHAAYQCLARMWEKGRGGGGHILCNPAPGSIRLDHSFFRFTPMIVSVVSSKMFKARTNPELGPPLARLEASLGPLGLWDQDIDSLRVLLIAETFVRLVFATTWGHFPRHAAFSSSAKPISGLSPRAPYLRLLPTPSEMEAYHP 734
BLAST of mRNA_Ecto-sp8_S_contig10921.1298.1 vs. uniprot
Match: A0A7S2DGL9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DGL9_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 1.590e-12 Identity = 49/126 (38.89%), Postives = 72/126 (57.14%), Query Frame = 3
Query: 2286 LETLVREFNAWTRTVDFPIRKVEAGLIGNGMRLGLVATEAIPQGQSYLSVPGSIVLDASKARTDPELGPPLSRLEASLGPLGLWDQDTDSLRVLLIAETFVRADLSPWAPYLRLLPTPSEMEVYHP 2663
L V EFN W FP+ KV A ++ GMR+G VATEAI +G++YL+VP S+++D + A P L L+ L+ S + D S+ + L+ ET V S + PYLRLLP+ ++ +P
Sbjct: 158 LVEAVNEFNDWIEAAGFPVNKVRAAIVP-GMRVGTVATEAIAEGETYLAVPKSVIMDTASAAKSPPLENILALLQRSR------EADFFSILLHLVYETKVLGSKSRFWPYLRLLPSQDDLSAMNP 276
BLAST of mRNA_Ecto-sp8_S_contig10921.1298.1 vs. uniprot
Match: A0A7S2A5C2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2A5C2_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 5.460e-8 Identity = 44/130 (33.85%), Postives = 68/130 (52.31%), Query Frame = 3
Query: 2289 ETLVREFNAWTRTVDFPIRKVEAGLIGNGMRLGLVATEAIPQGQSYLSVPGSIVLDA-------SKARTDPELGPPLSRL--EASLGPLGLWDQDTDSLRVLLIAETFVRADLSPWAPYLRLLPTPSEME 2651
E + EF A+ R+++ P+ KVE IGNG+RLG+VATE + + YLS+P S ++ S+ D L L + L G D + + L+ E FV + S W PYL+++PT E++
Sbjct: 69 EIALEEFRAYIRSMNLPVNKVEPKYIGNGLRLGVVATENMTKDNIYLSIPDSRTINVDTIFRLVSETNEDSMNSTHLKALLEKYRLSGGGKNDGGFQIMLLYLLHERFVAKEKSQWWPYLKIIPTVEEVK 198
BLAST of mRNA_Ecto-sp8_S_contig10921.1298.1 vs. uniprot
Match: A0A7S4RAH9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RAH9_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 9.140e-8 Identity = 44/130 (33.85%), Postives = 68/130 (52.31%), Query Frame = 3
Query: 2289 ETLVREFNAWTRTVDFPIRKVEAGLIGNGMRLGLVATEAIPQGQSYLSVPGSIVLDA-------SKARTDPELGPPLSRL--EASLGPLGLWDQDTDSLRVLLIAETFVRADLSPWAPYLRLLPTPSEME 2651
E + EF A+ R+++ P+ KVE IGNG+RLG+VATE + + YLS+P S ++ S+ D L L + L G D + + L+ E FV + S W PYL+++PT E++
Sbjct: 671 EIALEEFRAYIRSMNLPVNKVEPKYIGNGLRLGVVATENMTKDNIYLSIPDSRTINVDTIFRLVSETNEDSMNSTHLKALLEKYRLSGGGKNDGGFQIMLLYLLHERFVAKEKSQWWPYLKIIPTVEEVK 800
BLAST of mRNA_Ecto-sp8_S_contig10921.1298.1 vs. uniprot
Match: A0A7S2L968_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L968_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 3.000e-6 Identity = 40/132 (30.30%), Postives = 68/132 (51.52%), Query Frame = 3
Query: 2268 DDRSTGLETLVREFNAWTRTVDFPIRKVEAGLIGNGMRLGLVATEAIPQGQSYLSVPGSIVLDASKARTDPELGPPLSRLEASLGPLGLWDQDTDSLRVLLIAETFVRADLSPWAPYLRLLPTPSEMEVYHP 2663
D S L V EFN + ++ FP+ +EA +IGNG+R+G VAT+ + G+ Y SVP V+ ++ ++ + L+ L + + L + ++ E F+ + S W PYL++LP E + P
Sbjct: 564 DTSSNSLHESVNEFNLFANSLGFPVHHMEARIIGNGLRVGAVATKDLNIGEIYHSVPNESVICSNTIMSNIQN----DELKMFLQSVLSSGDEFHVLLLYILYERFLMKEKSNWWPYLQILPEIREFQSNSP 691
BLAST of mRNA_Ecto-sp8_S_contig10921.1298.1 vs. uniprot
Match: A0A812UF95_SYMMI (Setd3 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UF95_SYMMI) HSP 1 Score: 57.8 bits (138), Expect = 7.820e-5 Identity = 40/124 (32.26%), Postives = 65/124 (52.42%), Query Frame = 3
Query: 2286 LETLVREFNAWTRTVDFP--IRKVEAGLIGNGMRLGLVATEAIPQGQSYLSVPGSIVLDASKARTDPELGPPLSRLEASLGPLGLWDQDTDSLRVLLIAETFVRADLSPWAPYLRLLPTPSEME 2651
L+ + +FN W ++ P + ++A LI G R+G AT+ + + + YL+VP ++D+ KA D G L LE D L + L+ + FV S + PYLRLLP+P+E++
Sbjct: 189 LQRRLSQFNKWFNSLVRPPAVNHLKADLIP-GFRVGTTATKDLNKEELYLAVPNEAIIDSHKADRDGRFGKLLFDLERRFRRR----DDFHELLLYLVYQCFVVGSESKYWPYLRLLPSPTELD 307 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10921.1298.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10921.1298.1 >prot_Ecto-sp8_S_contig10921.1298.1 ID=prot_Ecto-sp8_S_contig10921.1298.1|Name=mRNA_Ecto-sp8_S_contig10921.1298.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=882bp MQGLGRTVDEGSCIAPCGFDSGDDDAKTDFSATLAEEEGEFPVDESTTTCback to top mRNA from alignment at Ecto-sp8_S_contig10921:1994..5849- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10921.1298.1 ID=mRNA_Ecto-sp8_S_contig10921.1298.1|Name=mRNA_Ecto-sp8_S_contig10921.1298.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=3856bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10921:1994..5849- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10921:1994..5849- >mRNA_Ecto-sp8_S_contig10921.1298.1 ID=mRNA_Ecto-sp8_S_contig10921.1298.1|Name=mRNA_Ecto-sp8_S_contig10921.1298.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=2646bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10921:1994..5849- (Ectocarpus species8 EcLAC_412)back to top |