mRNA_Ecto-sp8_S_contig1067.1038.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig1067.1038.1 vs. uniprot
Match: A0A6H5JN80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN80_9PHAE) HSP 1 Score: 330 bits (847), Expect = 1.880e-104 Identity = 163/285 (57.19%), Postives = 201/285 (70.53%), Query Frame = 1
Query: 445 RRRVALCFFGLSRSLPSTLPSIQGRVVDVLRAEDIDVDIFVHTYSLREVNNLRAGEFNIQYASHIGDYKLLNATRSMTTNQDDFDMVWPDPIALTHFDWAYSSNMAPGLIRNVFRAYWSMSDVWGLMAQFARERSIEYDAVVLSRPDVWFHVDIDLPRREFPLPEHTVFVPSFGTYGTERTAAGTRTNDRFAYGSVTAMRVMMNRIASFMQPSLGNEGDKVSSENVLALHLQANDITVQTFTFPMARVRLTGVIPSLDHGRVRAACNSGTDPMACDMVKLGFRCP 1299
R R A+CFFGL+RSL TLPS+Q R+++VLR + + VD+FVHTYSL EVNN RAGE + Y ++ D+ LN TRS+ TNQDDFD++W DP+++TH++W Y APG+IRNVFRAYWSMS WGLMA+ A EYDAVVL+RPDVWFH D+DLP R PLPEHTVF+PSF AA R NDRFAYGS+T MRV+MNR+A+ + G ++ SE VL HL+ NDI+VQ + R+RLT IP DH V AC SG DPMAC MV GF+ P
Sbjct: 82 RPRAAVCFFGLTRSLRWTLPSVQKRLLEVLR-QGMAVDVFVHTYSLVEVNNNRAGETKVMYGPYVNDFLALNPTRSLVTNQDDFDLIWTDPLSMTHYNWNYPEEDAPGVIRNVFRAYWSMSMSWGLMAEHAVAGGFEYDAVVLARPDVWFHYDVDLPTRTLPLPEHTVFLPSFDA----ELAAQVRKNDRFAYGSMTTMRVVMNRLATLLAADTGQLTGEIDSEYVLGHHLRKNDISVQMLDLLLTRIRLTRDIPMYDHRLVEEACLSGEDPMACRMVDAGFKFP 361
BLAST of mRNA_Ecto-sp8_S_contig1067.1038.1 vs. uniprot
Match: A0A836CLC1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLC1_9STRA) HSP 1 Score: 201 bits (510), Expect = 1.380e-55 Identity = 118/280 (42.14%), Postives = 165/280 (58.93%), Query Frame = 1
Query: 451 RVALCFFGLSRSLPSTLPSIQGRVVDVLRAED-IDVDIFVHTYSLREVNNLRAGEFNIQYASHIGDYKLLNATRSMTTNQDDFDMVWPDPIALTHFDWAYSSNMAPGLIRNVFRAYWSMSDVWGLMAQFARERSIEYDAVVLSRPDVWFHVDIDLPRREFPLPEHTVFVPSFGTYGTERTAAGTRTNDRFAYGSVTAMRVMMNRIASFMQPSLGNEGDKVS--SENVLALHLQANDITVQTFTFPMARVRLTGVIPSLDHGRVRAACNSGTDPMACDMVK 1281
R ALCFFGL+RS+ T+ +I+ + LR+ D I D+FVHTY + +++N RAGE YA+ D + L TR + T+QDDFD+ +PD ++ W+Y N ++N+FRA S++ VW +MA FA E SI+YDAVV RPDV + D+D+P+R LPE T FV F YG NDRFAYG +AMRV NR+ S + +L GD+ S SE +L HL+A++++V +RVR TG +P D V AC P AC ++
Sbjct: 35 RYALCFFGLTRSVQWTIQNIERHIFAPLRSNDTIRYDVFVHTYRMEKLDNPRAGEVAAVYANPNSDVQKLRPTRYLITSQDDFDLTYPDVQTMSPLQWSYPDNTT---VQNIFRAQNSLALVWSIMADFAAEHSIDYDAVVALRPDVLYLRDLDIPQRGV-LPERTAFVADFQHYG--------GCNDRFAYGRPSAMRVYANRLDSMLNAALRPVGDRKSFNSEQLLQRHLEAHNVSVVLADMLFSRVRSTGALPKQDKRLVVDACKQHL-PGACKALR 301
BLAST of mRNA_Ecto-sp8_S_contig1067.1038.1 vs. uniprot
Match: A0A6C0AMM1_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0AMM1_9ZZZZ) HSP 1 Score: 99.8 bits (247), Expect = 1.580e-18 Identity = 80/270 (29.63%), Postives = 128/270 (47.41%), Query Frame = 1
Query: 439 IARRRVALCFFGLSRSLPSTLPSIQGRVVDVLRAEDIDVDIFVHTYSLREV-NNLRAGEFNIQYASHIGDYKLLNATRSMTTNQDDFDMVWPDPIALTHFD-WAYSSNMAPG---LIRNVFRAYWSMSDVWGLMAQFARERSIEYDAVVLSRPDVWFHVDIDLPRREFPLPEHTVFVPSFGTYGTERTAAGTRTNDRFAYGSVTAMRVMMNRIASFMQPSLGNEGDKVSSENVLALHLQANDITVQTFTFPMARVRLTGVIPSLDHGRVR 1233
I + +VA+CFFGL+RSL TL SI+ + D LR I DIF+HTY ++ +N RAGE ++ + +YKLL T M +++ TH + W ++ PG + N WS+ + L ++ A+ R Y ++ RPDV + V +D+ F +++P+FG G NDRFA G MR+ NR + S + ++SE L ++ + I + F RVR G +D +++
Sbjct: 181 IPKVKVAICFFGLTRSLKLTLDSIEKYIFDPLRLHGIRYDIFLHTYKMKTAYSNPRAGEKDLILDAD--EYKLLEPTYHMVESKEAVSKKLDLEKYRTHGNPWGKETSARPGDFSTLDNHILYLWSLKQLTKLWSE-AKSR---YSHIIYCRPDVLYQVPLDISWFSFSPKSKKIYIPNFGLCG--------NVNDRFALGRPEEMRLYGNRFDDALAYS---KKKPLASEAYLIDTMRRHRIKYEHVNFYFIRVRANGKKNGIDVSQIK 433
BLAST of mRNA_Ecto-sp8_S_contig1067.1038.1 vs. uniprot
Match: A0A6C0DHX8_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0DHX8_9ZZZZ) HSP 1 Score: 89.0 bits (219), Expect = 5.090e-15 Identity = 78/270 (28.89%), Postives = 118/270 (43.70%), Query Frame = 1
Query: 439 IARRRVALCFFGLSRSLPSTLPSIQGRVVDVLRAEDIDVDIFVHTYSLRE-VNNLRAGEFNIQYASHIGDYKLLNATRSMTTNQDDFDMVWPDPIALTHFD-WAYSSNMAPG---LIRNVFRAYWSMSDVWGLMAQFARERSIEYDAVVLSRPDVWFHVDIDLPRREFPLPEHTVFVPSFGTYGTERTAAGTRTNDRFAYGSVTAMRVMMNRIASFMQPSLGNEGDKVSSENVLALHLQANDITVQTFTFPMARVRLTGVIPSLDHGRVR 1233
I + RVALCFFGL+RSL TLPSIQ + + L A I D ++HTY +++ N RAGE +I + +YKLL T M +++ T D W PG + N WS + + ++ Y ++ RPDV + V + + F + +P+FG G NDRFA G M R +Q S + ++SE L ++ + I + F R+R G +D G++R
Sbjct: 181 IKKVRVALCFFGLTRSLKFTLPSIQKFLFEPLIAHGIKYDTYLHTYKMKKPYTNPRAGERSITLDAD--EYKLLEPTYHMVESKETVSTYIDLKKYRTKGDPWGNEKEAIPGDFTTLDNHILYLWSQKQ----LTEMWQKNKGRYTHIIFCRPDVLYQVPLQIDW--FSFTSDKLCIPNFGLCG--------NVNDRFALGQPKQMIPYGERFDEALQYS---KKYPLASEAFLIATMKKHKIKYEHVNFYFTRIRANGNKNGMDLGQIR 431
BLAST of mRNA_Ecto-sp8_S_contig1067.1038.1 vs. uniprot
Match: A0A6C0JPQ4_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0JPQ4_9ZZZZ) HSP 1 Score: 84.7 bits (208), Expect = 1.210e-14 Identity = 69/270 (25.56%), Postives = 122/270 (45.19%), Query Frame = 1
Query: 439 IARRRVALCFFGLSRSLPSTLPSIQGRVVDVLRAEDIDVDIFVHTYSLREVNNLRAGEFNIQYASHIGD--YKLLNATRSMTTNQDDFDMVW--------PDPIALTHFDWAYSSNMAPGLIRNVFRAYWSMSDVWGLMAQFARERSIEYDAVVLSRPDVWFHVDIDLPRREFPLPEHTVFVPSFGTYGTERTAAGTRTNDRFAYGSVTAMRVMMNRIASFMQPSLGNEGDKVSSENVLALHLQANDITVQTFTFPMARVRLTGVIPSLD 1218
+ +++A+ F+G++RSL T+ SI+ + +VL+ + D DIFVHTY+L E N RA E +Y +I + YKLL A NQ++ + PDP W + I + Y + + + YD ++ RPD + +D+ + + ++T+ +PSFG + NDRFA + ++ ++ L N+ + + S+ +L + L+ N+I F AR+R G + D
Sbjct: 1 MTEKKIAIGFYGITRSLNYTIDSIEKNIFNVLKENNFDYDIFVHTYNLDEYKNTRANE---EYTKNIDNNQYKLLKAKYLKIDNQNEVKSMLNLESYRTKPDP-------WKTNYETVDFYILGKYSQY--------SLTKIIENSNNNYDYILFVRPDCLYLDRLDVSKFNL-INDNTILIPSFGH----------QMNDRFAITNNKTYKIYGKIFEELLE--LSNKYE-LHSQTILGMILEKNNIENIKIKFNFARIRSDGKVAKRD 238
BLAST of mRNA_Ecto-sp8_S_contig1067.1038.1 vs. uniprot
Match: A0A6C0K525_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0K525_9ZZZZ) HSP 1 Score: 85.5 bits (210), Expect = 1.440e-13 Identity = 77/254 (30.31%), Postives = 114/254 (44.88%), Query Frame = 1
Query: 448 RRVALCFFGLSRSLPSTLPSIQGRVVDVLRAEDIDVDIFVHTYSLRE-VNNLRAGEFNIQYASHIGDYKLLNATRSMTTNQDDFDMVWPDPIALTHF-----DWAYSSNMAPGLIRNVFRAYWSMSDVWGLMAQFARERSIEYDAVVLSRPDVWFHVDIDLPRREFPLPEHTVFVPSFGTYGTERTAAGTRTNDRFAYGSVTAMRVMMNRIASFMQPSLGNEGDKVSSENVLALHLQANDITVQTFTFPMARVR 1191
RRVA+CF+G+ RSL TLPSIQ + L I DIF+HTY L + + A E + + D+K LN T+ + NQ D I L + W N A + N RA WS+ V L + + Y ++ RPD+ + + I + E+ + + +P+F +G G DRFA G M++ NR + S + ++ SE LA L+ N I V+ F R R
Sbjct: 476 RRVAVCFWGIMRSLDFTLPSIQQNIFKPLDDAKIPYDIFLHTYDLNDDCSGTYASECTLPINKY--DFKRLNPTKYILENQKLADK----KIGLNKYLAKGNPW----NAAIEVAYNHVRALWSLKQVTTLWSNNNKNDITPYSHIMYCRPDMTYIMPI---KPEWFVFSEEMVIPNFARHGRR----GMSICDRFAIGMPDQMKIYGNRFDGALMYS---KKYQLHSETYLAETLRMNHINVKFVPFGFIRTR 709
BLAST of mRNA_Ecto-sp8_S_contig1067.1038.1 vs. uniprot
Match: A0A6H5JF54_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF54_9PHAE) HSP 1 Score: 82.4 bits (202), Expect = 7.110e-13 Identity = 53/117 (45.30%), Postives = 68/117 (58.12%), Query Frame = -1
Query: 1610 LSFKVEPNGLQVRRSRVAAVNVKMYLARPSHLRLKLEDEYAHLVWSAVLGLADISVVTPPPVHAVGQIVPGPLPRRHAVALADGRRDEQ---QLFPLNLDASHVAYNAYHGKDAPRR 1951
LSF V+ N +VRR +V A ++K + +P LRL EDE+AHL WSA LGLAD SVV P ++ V L RR AL+ +++ PL LDA H Y AYHG+DA R
Sbjct: 350 LSFTVQLNSRRVRRRKVRAPDLKPWHVQPHDLRLPYEDEFAHLGWSADLGLADTSVVAVP-LYTV-------LDRRVDCALSSCMTEDEAGDSFSPLQLDAFHALYEAYHGEDAAPR 458
BLAST of mRNA_Ecto-sp8_S_contig1067.1038.1 vs. uniprot
Match: A0A8J5X6X1_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X6X1_DIALT) HSP 1 Score: 79.0 bits (193), Expect = 3.730e-12 Identity = 75/256 (29.30%), Postives = 108/256 (42.19%), Query Frame = 1
Query: 451 RVALCFFGLSRSLPSTLPSIQGRVVDVLRAEDIDVDIFVHTYSLREVNNLRAGEFNIQYASHIGDYKLLNATRSMTTNQDDFDMVWPDPIALTHFDWAYSSNMAPGLIRNVFRAYWSMSDVWGLMAQFARERSIEYDAVVLSRPDVWFHVDIDLPRREFPLPEHTVFVPSFGTYGTERTAAGTRTNDRFAYGSVTAMRVMMNRIASFMQPSLGNEGDKVSSENVLALHLQANDITVQTFTFPMARVRLTGVIPSLD 1218
RVALCF+GL+RSL T+ SI+ V LRA +++VHTYS V + A E+N+ LL R T Q D D + D H AY+ + RN+ R +S+ V L A Y AV RPD+ F ID R + ++ P + + E NDR A+G A NR+ + + ++SE LA + + + RVR TG + + D
Sbjct: 38 RVALCFYGLNRSLRHTIGSIRAHVFAPLRAACAAWEVYVHTYSETTVTSAHAHEYNVSIGGAAEMVALLRPRRHAVTAQADADRLL-DMRVYAHAGLAYAEPVQ----RNLLRQLYSLQLVTALWTPAAAR----YRAVGYLRPDLRFVAPIDA-RAMLRARDDEIYTPFWHRHLGE--------NDRLAFGGARAAAAWGNRLFDAAEYTRARP---LNSEAFLAWVIAQRGLVQRLTGMVGMRVRATGEVHAQD 272
BLAST of mRNA_Ecto-sp8_S_contig1067.1038.1 vs. uniprot
Match: A0A6C0AUQ6_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0AUQ6_9ZZZZ) HSP 1 Score: 76.3 bits (186), Expect = 1.000e-11 Identity = 67/257 (26.07%), Postives = 111/257 (43.19%), Query Frame = 1
Query: 451 RVALCFFGLSRSLPSTLPSIQGRVVDVLRAEDIDVDIFVHTYSLREVNNLRAGEFNIQYASHIGDYKLLNATRSMTTNQDDFDMVWPDPIALTHFD-WAYSSNMAPGLIRNVFRAYWSMSDVWGLMAQFARERSIEYDAVVLSRPDVWFHVDIDLPRREFPLPEHTVFVPSFGTYGTERTAAGTRTNDRFAYGSVTAMRVMMNRIASFMQPSLGNEGDKVSSENVLALHLQANDITVQTFTFPMARVRLTGVIPSLD 1218
+VAL FFG++RSL T+ +I+ V++ L+ +V IF+HTY L N+R E + + +YKLLN + NQD+ TH D W N I + + + + E++ ++ RPDV + I + + +T+ +P+F Y +T NDRFA + ++ ++ S N + SE +L +L N I + F R+R+ G I D
Sbjct: 2 KVALGFFGITRSLKFTIETIRENVINPLKRLGYEVKIFIHTYKLDTYKNIRTKEASDNIDND--EYKLLNPDEFIIDNQDEVKERLNMQQYRTHRDPWNTKYNSVDNFILGQYSKL--------RLTELIKNTKDEFEYILFLRPDVKYLNKITKLFLD-KVNINTICIPNFSLYP-RKTQGFPMFNDRFAITNKYTYKIYGEVFHKLLEISKDNP---LHSETILTKYLTNNGIEYEYIPFIFQRIRIDGSIEPFD 243
BLAST of mRNA_Ecto-sp8_S_contig1067.1038.1 vs. uniprot
Match: A0A6C0HSD7_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0HSD7_9ZZZZ) HSP 1 Score: 76.3 bits (186), Expect = 1.020e-11 Identity = 65/251 (25.90%), Postives = 109/251 (43.43%), Query Frame = 1
Query: 451 RVALCFFGLSRSLPSTLPSIQGRVVDVLRAEDIDVDIFVHTYSLREVNNLRAGEFNIQYASHIGDYKLLNATRSMTTNQDDFDMVWPDPIALTHFD-WAYSSNMAPGLIRNVFRAYWSMSDVWGLMAQFARERSIEYDAVVLSRPDVWFHVDIDLPRREFPLPEHTVFVPSFGTYGTERTAAGTRTNDRFAYGSVTAMRVMMNRIASFMQPSLGNEGDKVSSENVLALHLQANDITVQTFTFPMARVRLTG 1200
++AL FFG++RSL T+ SI+ ++ L+ ID DIF+HTY + N+R E Y ++ +YKLLN Q++ TH D W N + N A +S G + + +I YD ++ RPD + +++ + + T+ +P+F +G + NDRF ++ + N + S + + SE VL + D+ + F RVR G
Sbjct: 2 KIALAFFGITRSLKYTIKSIKRNILQHLKESGIDCDIFMHTYKINNYANIRTKEKPTSYNNN--EYKLLNPKYIQIDVQEEIKKKINMSRYRTHKDPW----NTGYNSVDNFILAQYSK----GQVVKMIDNTNINYDYIMYVRPDCLYTHKLNVQYLR-DVDDTTICIPNFHLFGPHKF------NDRFCITNMKTYKFYGNTFDKLLNIS---KQKSLHSERVLGELMNNYDLKIIRVPFIFLRVRCNG 232 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig1067.1038.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig1067.1038.1 >prot_Ecto-sp8_S_contig1067.1038.1 ID=prot_Ecto-sp8_S_contig1067.1038.1|Name=mRNA_Ecto-sp8_S_contig1067.1038.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=347bp MTDSKHSSLLGIADVRGPASWRSWCGRLVHVALAAGVAAQHHQPTERGRRback to top mRNA from alignment at Ecto-sp8_S_contig1067:6441..15726- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig1067.1038.1 ID=mRNA_Ecto-sp8_S_contig1067.1038.1|Name=mRNA_Ecto-sp8_S_contig1067.1038.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=9286bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1067:6441..15726- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig1067:6441..15726- >mRNA_Ecto-sp8_S_contig1067.1038.1 ID=mRNA_Ecto-sp8_S_contig1067.1038.1|Name=mRNA_Ecto-sp8_S_contig1067.1038.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1041bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1067:6441..15726- (Ectocarpus species8 EcLAC_412)back to top |