mRNA_Ecto-sp8_S_contig10498.781.1 (mRNA) Ectocarpus species8 EcLAC_412
|
Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10498.781.1 vs. uniprot
Match: D7FNT8_ECTSI (Exportin-T n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNT8_ECTSI) HSP 1 Score: 1028 bits (2658), Expect = 0.000e+0 Identity = 646/759 (85.11%), Postives = 656/759 (86.43%), Query Frame = 1
Query: 19 GGAEVGRLFRAMDHLPQLLATLYQRMKYPPDFAFDPSDEDEGEEDMLRQQLRKHLVNAIRNAPETVLEFICRALSSLPTPLSGLPFPDLEAALRLIFHFGEGCGGVSVLNSSXXXXXXXXXXXRPASPGAAELLRSGAFPQMVLALHDSDVARHKHPQVVMLYFQLTVRYSKMLADGPPHLIPKVLEAICGPQGLSNADVTLRTRSCYFLTKLVKAMKEGVVPYVDVIVPGVQALLDSPQGNPMDLSDEAKLNLISRHAAFACVTTSPFPPSRFKEESRLIPSGSNTSKSLQAARE--------------------ILLLLAHTVRRTHTCTLTSHLSPSRFFFLFFFQALEAATSALMSFPRHVALRAKTMFLVHGLIPCLGEGLLRALPLAALLVLVQEGDGKDLMEVAQVLNQLTIEYGPKSAQLLDGALMPFIRRTYQLTPGAGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAVGAEAQQLLAHEVAERAGFQKLCFSVIQHVSSNGLAGVLSSPTNAPHLDGMLRSVVDGLSGAEDASTKKTCLYIFSLLLGGFNRGRSGGVPAAASAGGANAGEXXXXXXXXXXXXXXXXGAKKGLRAAATQRRALSGKGGGLWTGSGPTVDMEPGVQSAVTAFVCERAVPAALKCLVDGAPPTGLDLRDAAAMSAIVNMGALLKEAREASGGSARFVGVAALACSCTPQVAEQLQLAVEGAADGPAIATALK 2235
GG VGRLFRAMDHLPQLLATLYQRMKYPPDFAFDPSDEDEGEEDMLRQQLRKHLVNAIRNAPETVLEFICRALSSLPTPLSGLPFPDLEAALRLIFHFGEGCGGVSVLNSSXXXXXXXXXXX PA+PGAAELLRSGAFPQMVLALHDSDVARHKHPQVVMLYFQLTVRYSKMLADGPPHLIPKVLEAICGPQGLSNADVTLRTRSCYFLTKLVKAMKEGVVPYVDVIVPGVQALLDSPQGNPMDLSDEAKLNL + T P P + L P +++LQ A I LA V + + FFQALEAATSALMSFPRHVALRAKTMFLVHGLIPCLGEGLLRALPL+ALLVLVQEGDGKDLMEVAQVLNQLTIEYGPKSAQLLDGALMPFIRRTYQLTPGAGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXX GAEAQQLLAHEVAERAGFQKLCFSVIQHVSSNGLAGVLSSPTNAPHLDG+LRSVVDGLSGAEDASTKKTCLYIFSLLLGGFNRGRSGGVPAAA AGE XXXXXXXXXXXXX KKGLRAAATQRRALSGKGGGLWTGSGPTVDMEPGVQSAVTAFVCERAVPAALKCLVDGAPPTGLDLRDAAAMSAIVNMGALLKEAREASGGSARFVGVAALACSCTPQVAEQLQLAVEGAADGPAIA ALK
Sbjct: 393 GGGGVGRLFRAMDHLPQLLATLYQRMKYPPDFAFDPSDEDEGEEDMLRQQLRKHLVNAIRNAPETVLEFICRALSSLPTPLSGLPFPDLEAALRLIFHFGEGCGGVSVLNSSXXXXXXXXXXX-PAAPGAAELLRSGAFPQMVLALHDSDVARHKHPQVVMLYFQLTVRYSKMLADGPPHLIPKVLEAICGPQGLSNADVTLRTRSCYFLTKLVKAMKEGVVPYVDVIVPGVQALLDSPQGNPMDLSDEAKLNLYETIGFLVGMPTVPVPKQVQLLDGVLGPQMRRIAENLQRAASAGAGGGAGLVGEGEKGGDDAIGAELAAGVGAMANVSKGFKPVVAAEVEARFFQALEAATSALMSFPRHVALRAKTMFLVHGLIPCLGEGLLRALPLSALLVLVQEGDGKDLMEVAQVLNQLTIEYGPKSAQLLDGALMPFIRRTYQLTPGAGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWPNGTTAELPXXXXXXXXXXXXXXXXXXXGAEAQQLLAHEVAERAGFQKLCFSVIQHVSSNGLAGVLSSPTNAPHLDGVLRSVVDGLSGAEDASTKKTCLYIFSLLLGGFNRGRSGGVPAAA------AGEGGAXXXXXXXXXXXXXXTKKGLRAAATQRRALSGKGGGLWTGSGPTVDMEPGVQSAVTAFVCERAVPAALKCLVDGAPPTGLDLRDAAAMSAIVNMGALLKEAREASGGSARFVGVAALACSCTPQVAEQLQLAVEGAADGPAIAAALK 1144
BLAST of mRNA_Ecto-sp8_S_contig10498.781.1 vs. uniprot
Match: A0A6H5KW21_9PHAE (Exportin-T n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW21_9PHAE) HSP 1 Score: 771 bits (1991), Expect = 6.930e-272 Identity = 509/619 (82.23%), Postives = 525/619 (84.81%), Query Frame = 1
Query: 442 MVLALHDSDVARHKHPQVVMLYFQLTVRYSKMLADGPPHLIPKVLEAICGPQGLSNADVTLRTRSCYFLTKLVKAMKEGVVPYVDVIVPGVQALLDSPQGNPMDLSDEAKLNLISRHAAFACVTTSPFPPSRFKEESRLIPSGSNTSKSLQ-----AAREILLLLAHT-------VRRTHTCTLTSHLSPSRFFFLF--------FFQALEAATSALMSFPRHVALRAKTMFLVHGLIPCLGEGLLRALPLAALLVLVQEGDGKDLMEVAQVLNQLTIEYGPKSAQLLDGALMPFIRRTYQLTPGAGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-AGAVGAEAQQLLAHEVAERAGFQKLCFSVIQHVSSNGLAGVLSSPTNAPHLDGMLRSVVDGLSGAEDASTKKTCLYIFSLLLGGFNRGRSGGVPAAASAGGANAGEXXXXXXXXXXXXXXXXGAKKGLRAAATQRRALSGKGGGLWTGSGPTVDMEPGVQSAVTAFVCERAVPAALKCLVDGAPPTGLDLRDAAAMSAIVNMGALLKEAREASGGSARFVGVAALACSCTPQVAEQLQLAVEGAADGPAIATALK 2235
MVLALHDSDVARHKHPQVVMLYFQLTVRYSKMLADGPPHLIPKVLEAICGPQGLSNADVTLRTRSCYFLTKLVKAMKEGVVPYVDVIVPGVQALLDSPQGNPMDLSDEAKLNL + P P + L P +++LQ A + L+ + + + + + S+ F F QALEAATSALMSFPRHVALRAKTMFLVHGLIPCLGEGLLRALPL+ALLVLVQEGDGKDLMEVAQVLNQLTIEYGPKSAQLLDGALMPFIRRTYQLTPGAGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AGAVGAEAQQLLAHEVAERAGFQKLCFSVIQHVSSNGLAGVLSSPTNAPHLDG+LRSVVDGLSGAEDASTKKTCLYIFSLLLGGFNRGRSGG A GGA+A XXXXXX K LRAAATQRRALSGKGGGLWTGSGPTVDMEPGVQSAVTAFVCERAVPAALKCLVDGAPPTGLDLRDAAAMSAIVNMGALLKEAREASGGSARFVGVAALAC CTPQVAEQLQLAVEGAADGPAIATALK
Sbjct: 1 MVLALHDSDVARHKHPQVVMLYFQLTVRYSKMLADGPPHLIPKVLEAICGPQGLSNADVTLRTRSCYFLTKLVKAMKEGVVPYVDVIVPGVQALLDSPQGNPMDLSDEAKLNLYETIGFLVGMPNVPVPKQVQLLDGVLGPQMRRIAENLQRVAAAGAGGVAGLVGESEKGGDDAIGAELAAGVGAMANVSKGFKPVVAAEVEARFLQALEAATSALMSFPRHVALRAKTMFLVHGLIPCLGEGLLRALPLSALLVLVQEGDGKDLMEVAQVLNQLTIEYGPKSAQLLDGALMPFIRRTYQLTPGAGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAVGAEAQQLLAHEVAERAGFQKLCFSVIQHVSSNGLAGVLSSPTNAPHLDGVLRSVVDGLSGAEDASTKKTCLYIFSLLLGGFNRGRSGG-DVGAGKGGASA-------NGPAGXXXXXXXXXKSLRAAATQRRALSGKGGGLWTGSGPTVDMEPGVQSAVTAFVCERAVPAALKCLVDGAPPTGLDLRDAAAMSAIVNMGALLKEAREASGGSARFVGVAALACGCTPQVAEQLQLAVEGAADGPAIATALK 611
BLAST of mRNA_Ecto-sp8_S_contig10498.781.1 vs. uniprot
Match: A0A836CAL0_9STRA (Exportin-T n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAL0_9STRA) HSP 1 Score: 354 bits (908), Expect = 9.140e-105 Identity = 291/751 (38.75%), Postives = 382/751 (50.87%), Query Frame = 1
Query: 43 FRAMDHLPQLLATLYQRMKYPPDFAFDPSDEDEGEEDMLRQQLRKHLVNAIRNAPETVLEFICRALSSLPTPLSGLPFPDLEAALRLIFHFGEGCGGVSVLNSSXXXXXXXXXXXRPASPGAAELLRSGAFPQMVLALHDSDVARHKHPQVVMLYFQLTVRYSKMLADGPPHLIPKVLEAICGPQGLSNADVTLRTRSCYFLTKLVKAMKEGVVPYVDVIVPGVQALLDSPQGNPMDLSDEAKLNLISRHAAFACVTTSPFPPSRFKE---ESRLIPSGSNTSKSLQ-------------AAREILLLLAHTVRRTHTCTLTSHLSPSRFFFLFFFQALEAATSALMSFPRHVALRAKTMFLVHGLIPCLGEGLL-RALPLAALLVLVQEGDGKDLMEVAQVLNQLTIEYGPKSAQLLDGALMPFIRRTYQLTPGAGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAVGAEAQQLLAHEVAERAGFQKLCFSVIQHVSSNGLAGVLSSPTNAPHLDGMLRSVVDGLSGAEDASTKKTCLYIFSLLLGGFNRGRSGGVPAAASAGGANAGEXXXXXXXXXXXXXXXXGAKKGLRAAATQRRALSGKGGGLWTGSGPTVDMEPGVQSAVTAFVCERAVPAALKCLVDGAPPTGLDLRDAAAMSAIVNMGALLKEAREASGGSARFVGVAALA---CSCTPQVAEQLQLAVEGAADGPAIATALK 2235
F AMDH P+LL+ +Y RM++P DF FD DE++GEE+ LR LRK LVN R APE VL F C ALS+LP+PLS LP+P EAALRL++HF EGC + A+ A LL GAFPQMV ALH SD+ARH HPQV++LYF + VRY K+L G L P VLEA+C +GLSNA +R R+ Y L++LVKA+ +VPYV+ +VP V ALL S + LSDE+ LNL + C+ P P+ + E L P + ++L AA L V + T L ++P F Q LEAA + L++ P H +RA+ +FLVH ++P LGEG+L R P A LV G DL E+ Q+LNQ + +GPK+ +D L+P IR+ Y L P XXXXXXXXXXXXXXXXXXXXXXXXXXXXXAG+ + L+HEV ER K S + HV S+G+ GVL S NAP LD +L+SV+D L+ +D KK+C+ F+ + K L A AL P + + +FV ERAVPAA+ CL+ GL+++DA A+ A+ +G LL AR GG A V A +C EQL A+ A D ++ +L+
Sbjct: 409 FNAMDHAPRLLSVVYARMQFPADFEFDAEDEEDGEEEALRGALRKVLVNTCRAAPELVLRFACEALSALPSPLSALPWPAAEAALRLLYHFSEGCASAA------------------AAANAQALLHEGAFPQMVAALHRSDIARHPHPQVLILYFDIAVRYVKVLRGGGAELTPLVLEALCSERGLSNASRLVRARAAYNLSRLVKALAGDMVPYVEAVVPAVAALLRSGASQGL-LSDESVLNL---YETLGCLVGMPAVPAERRVAYLEGVLAPLLARVHEALAQPQAIAQDPEAAGAALAFCLAGLANVSKGFTKPLPEAVAP-------FTQELEAAAAVLLALPDHPGVRARAIFLVHRMVPVLGEGMLPRVGPACA--ALVARCTGADLEEIVQLLNQFCVAFGPKAFAFMDAMLLPLIRKIYDLMP--------------------------PPVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGSPLQSPPEPLSHEVLERTALLKQYLSFLTHVVSDGMLGVLCSAANAPQLDAVLQSVLDTLAQVDDPVAKKSCIAAFAAMA-------------------------------------------KELAPDARSAPALP-----------------PAAHAGLQSFVLERAVPAAISCLLS----PGLNVKDANAIGAVNQVGQLLFLARRLQGGGAECVRAALQQQQQVACPAHSVEQLLGALASAEDAQTMSKSLR 1038
BLAST of mRNA_Ecto-sp8_S_contig10498.781.1 vs. uniprot
Match: A0A7S4M7Y7_9STRA (Exportin-T (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4M7Y7_9STRA) HSP 1 Score: 214 bits (545), Expect = 6.730e-56 Identity = 147/430 (34.19%), Postives = 218/430 (50.70%), Query Frame = 1
Query: 43 FRAMDHLPQLLATLYQRMKYPPDFAFDPSDEDEGEEDMLRQQLRKHLVNAIRNAPETVLEFICRALSS-LPTPLSGLPFPDLEAALRLIFHFGEGCGGVSVLNSSXXXXXXXXXXXRPASPGAAELLRSGAFPQMVLALHDSDVARHKHPQVVMLYFQLTVRYSKMLADGPPHLIPKVLEAICGPQGLSNADVTLRTRSCYFLTKLVKAMKEGVVPYVDVIVPGVQALLDSPQGNPMDLSDEAKLNLISRHAAFACVT-----------TSPFPPSRFKEESRLIPSGSNTSKSLQAAREILLLLAHTVRRTHTCTLTSHLS-PSRFFFLFFFQALEAATSALMSFPRHVALRAKTMFLVHGLIPCLGEGLLRALPLAALLVLVQEGDGKDLMEVAQVLNQLTIEYGPKSAQLLDGALMPFIRRTYQLTP 1293
F DHL +LL +Y +M+YPPDFAFDP DEDE EE++ R +LRK +A+R+ P+ +EF+ LSS L PLS P PD+EAALRL++H EG RP PGA L + G F M++ LHDSDV+ H H +V+MLY+ ++VRY +L D P L+ ++L I GP+GL++ +R+RSCY L KLV +M + + PY + G+Q+LL+ P P+ LS + +L L T T+ P ++ L + TS L+ E L + + L+ S PS + L S L + P +R+K + +I CLG +L P + L LV +D ++V ++ QL + K+ + G+L+PF+RR P
Sbjct: 143 FLVADHLHRLLVVVYDQMRYPPDFAFDPEDEDEAEEEVYRSKLRKLHRDAVRSRPDESMEFLSSTLSSRLSAPLSSAPMPDVEAALRLVYHHCEGV--------------------RPP-PGARTLAKDGRFRSMLIGLHDSDVSSHPHGEVLMLYYDVSVRYHPLLRDRPD-LLERLLGCISGPRGLTHPRPRVRSRSCYLLLKLVSSMGKSLRPYAETAAGGIQSLLNDPTYGPL-LSTDDRLYLFETTGVLLGKTGIEPADQRRYLTAVMTPHVHSIQAILSSTEMTTSSDLERCGEALAVAVAAISN-----LSKGFSRPSGEVSSVLGETLPIVLSVLTALPHDETVRSKCGAYLARMIHCLGLAVLPYAP-SYLDALVMHCTVEDAVDVQMIIQQLASRFKGKAVDAISGSLVPFLRRCRDFAP 543
BLAST of mRNA_Ecto-sp8_S_contig10498.781.1 vs. uniprot
Match: A0A448ZS68_9STRA (Exportin-T n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZS68_9STRA) HSP 1 Score: 209 bits (533), Expect = 3.320e-53 Identity = 163/570 (28.60%), Postives = 262/570 (45.96%), Query Frame = 1
Query: 61 LPQLLATLYQRMKYPPDFAFDPSDEDEGEEDMLRQQLRKHLVNAIRNAPETVLEFICRALSSLPTPLSGLPFPDLEAALRLIFHFGEGCGGVSVLNSSXXXXXXXXXXXRPASPGAAELLRSGAFPQMVLALHDSDVARHKHPQVVMLYFQLTVRYSKMLADGPPHLIPKVLEAICGPQGLSNADVTLRTRSCYFLTKLVKAM------KEG----VVPYVDVIVPGVQALLDSPQGNPMDLSDEAKLNLISRHAAFACVT-TSPFPPSRFKEESRLIPSGSNTSKSLQAAREILLLLAHTVRRTHTCTLTSHLSPSRFFFL-------FFFQALEAATSALMSFPRHVALRAKTMFLVHGLIPCLGEGLLRALPLAALLVLVQEGDGKDLMEVAQVLNQLTIEYGPKSAQLLDGALMPFIRRTYQLTPGAGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAVGAEAQQLLAHEVAERAGFQKLCFSVIQHVSSNGLAGVLSSPTNAPHLDGMLRSVVDGLSGAEDASTKKTCLYIFSLLL 1716
LP+LL Y +M+YPPDF +D D+DE EE+M R +LRK +R P+ L+F C+ LS LP PLS P P++E A+ L++ + EG RP PG ++R+ F +++ LH SD+ H H ++++LY++ +VRY +L + L+ KVL AI G +GL + D +R+R CY L +L+K+M K G + PYV+ V G+Q+LL++ ++L + LNL SP ++ + + P + L + L T + ++ + S+ F + L+ A S L P + +R KT V LI CL + +L +P L +L++ + D+++V+Q++NQL I++ K+ +LD L+PF+++ + L+ S E + H E QKL F+V+ HV +N + GVL S NA L+ +L+S+ +G ED+ KKTCL F LLL
Sbjct: 429 LPKLLTITYNQMRYPPDFQYDFEDDDEAEEEMYRTELRKLNKKFVRANPDLCLQFTCQILSQLPLPLSTAPTPNVEVAISLVYQYCEGI--------------------RPP-PGMKVVMRNETFCNLLVGLHTSDITEHPHREILILYYETSVRYYPLLKERSD-LLQKVLGAITGTRGLQHEDAKVRSRCCYLLLRLIKSMGTSGNKKSGGNCLLRPYVETAVSGIQSLLENKS---IELRVDDTLNLFETIGLLLGKNGLSPSEQGQYLTQV-MTPHVRSIETILNDKKHELAQDPDAYGETLSNSVAAIAYLSKGFKKPPIEVQNVLLETLKVAFSVLEMLPNNEEVRNKTYIFVQRLIQCLEDKVLDVMP-RLLFILIKHCNSGDILDVSQLINQLCIKFRAKAMCVLDSNLLPFLQKCHHLSNTVVSENSSAQERHQ--------------------------------------------------GEDATVAPHLRTEELSIQKLSFAVLNHVVANDVTGVLLSSANASSLEAILQSMSEGAINVEDSLMKKTCLIFFRLLL 921
BLAST of mRNA_Ecto-sp8_S_contig10498.781.1 vs. uniprot
Match: B7G7L1_PHATC (Exportin-T n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G7L1_PHATC) HSP 1 Score: 207 bits (528), Expect = 1.360e-52 Identity = 159/567 (28.04%), Postives = 254/567 (44.80%), Query Frame = 1
Query: 58 HLPQLLATLYQRMKYPPDFAFDPSDEDEGEEDMLRQQLRKHLVNAIRNAPETVLEFICRALS-------SLPT-----PLSGLPFPDLEAALRLIFHFGEGCGGVSVLNSSXXXXXXXXXXXRPASPGAAELLRSGAFPQMVLALHDSDVARHKHPQVVMLYFQLTVRYSKMLA-DGPPHLIPKVLEAICGPQGLSNADVTLRTRSCYFLTKLVKAMKEGVVPYVDVIVPGVQALLDSPQGNPMDLSDEAKLNLISRHAAFACVTTSPFPPSRFKEESRLIPSGSNTSKSLQAAREILLLLAHTVRRTHTCTLTSHLS-----PSRFFFLFFFQALEAATSALMSFPRHVALRAKTMFLVHGLIPCLGEGLLRALPLAALLVLVQEGDGKDLMEVAQVLNQLTIEYGPKSAQLLDGALMPFIRRTYQLTPGAGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAVGAEAQQLLAHEVAERAGFQKLCFSVIQHVSSNGLAGVLSSPTNAPHLDGMLRSVVDGLSGAEDASTKKTCLYIF 1704
HLPQ L LYQ++KYP DF+F+ D++ EE+ R++L K V +R AP T +F+C A + S T +S P PDLEA LRL++ + EG RP +PG +++ F +++ALH+S +A H H +++ Y+ + VRY + L+ +VL+A+ G +GL + +R+R CY L +LVKA+ + P+V+ V G+Q LL + ++L + L L T P + P + KSLQ R + R + +HLS P++ L + + + + P H +R KTM L+ +I CLG+ +L +P L +L++ + +D++ V+Q+ NQL I++ S ++DGALMPF+R+ Y L P A + H E+ QKL F V+QH+ ++ + VL SPTN +L+ +LRS+ DG D +KTC+ F
Sbjct: 430 HLPQTLNILYQQIKYPKDFSFNFIDDENAEEEQYREELGKLYVKLVRVAPTTCFQFVCEAAAQWLDRTNSSNTNDGCITMSNAPTPDLEATLRLLYKYCEGI--------------------RP-TPGMKTAMKNQTFCALLVALHESPIANHGHFEILCWYYDVAVRYYPIFQHSNHTILLSRVLDAMTGARGLQHGHARVRSRCCYLLLRLVKAIAPLLRPFVETAVAGIQGLLTN---TTLELRPDDTLYLFETIGLLLGKTGIDAPEQARYLTLVMTPHVRSIEKSLQDPRLLQDTEFFGDRLAQSIAALAHLSKGFSKPAQSIQLVLMETVNITQIIMEALPNHEQVRNKTMVLLPRMIQCLGDQVLDKIP-RFLYILIEHCNSEDVLFVSQIFNQLCIKFKEASVPVIDGALMPFLRKCYALVPATDDV-----------------------------------------------------------AGTSDVPPHLRTEQLSIQKLTFVVLQHIVTHNASAVLMSPTNVGNLESVLRSMSDGAVYVTDPIVQKTCVKFF 912
BLAST of mRNA_Ecto-sp8_S_contig10498.781.1 vs. uniprot
Match: B8C3C8_THAPS (Exportin-T n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C3C8_THAPS) HSP 1 Score: 197 bits (502), Expect = 4.290e-49 Identity = 160/561 (28.52%), Postives = 251/561 (44.74%), Query Frame = 1
Query: 61 LPQLLATLYQRMKYPPDFAFDPSDEDEGEEDMLRQQLRKHLVNAIRNAPETVLEFICRALSSLPTPLSGLPFPDLEAALRLIFHFGEGCGGVSVLNSSXXXXXXXXXXXRPASPGAAELLRSGAFPQMVLALHDSDVARHKHPQVVMLYFQLTVRYSKMLADGPPHLIPKVLEAICGPQGLSNADVTLRTRSCYFLTKLVKAM-KEGVVPYVDVIVPGVQALLDSPQGNPMDLSDEAKLNLISRHAAFACVTTSPFPPSRFKEESRLIPSGSNTSKSLQA---AREI-----LLLLAHTVRRTHTCTLTSHLSPSRFFFLFFFQALEAATSALMSFPRHVALRAKTMFLVHGLIPCLGEGLLRALPLAALLVLVQEGDGKDLMEVAQVLNQLTIEYGPKSAQLLDGALMPFIRRTYQLTPGAGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAVGAEAQQLLAHEVAERAGFQKLCFSVIQHVSSNGLAGVLSSPTNAPHLDGMLRSVVDGLSGAEDASTKKTCLYIFSLLL 1716
L ++L+ L +RMKYP F F EE++ R LRK +R P+ VL F+ +LSSLP PLS + D+E ALRL+ H+GEG RPA PGA LR F +MV ALH SDV+ H H +V++LY+ L+VRY+ +L D PP L+ +L A+ G +GL + +R+R CY L +LVK++ + + PYV+V+V G+Q LL P N + L L L T + + L P + K+LQ+ AR++ L ++ + + +H P L A++ S L++ P +R +T L+ +I CLGE +L +P +L +D+++V+Q+LNQL I++ +A +D AL+PF+++ + S A H V E+ +K F+ +QH++++ + V S N +L + DG + D KKTC+ S L+
Sbjct: 600 LQRVLSILQERMKYPSSFDFXXXXXXXAEEEVYRTHLRKLYQRIVRFKPQMVLHFMAASLSSLPQPLSMVSTSDMEVALRLVHHYGEG--------------------RRPA-PGAKTALRDAQFREMVTALHRSDVSSHPHREVLLLYYDLSVRYASLLKDSPPELLSGLLGALSGDRGLQHPHARVRSRCCYLLLRLVKSVGAKAMRPYVEVVVDGIQRLL-FPSTNILQLPANEALYLFEITGTLLGTTGLDNEVQQRCATAVLTPHVQSIEKTLQSPDLARDVEQYGEQLSMSISAIAQLSKGWQNHPPPEVQAVLV--AAVDVCRSVLVALPSSPLVRNRTAVLLQRMILCLGERVLPTMPAFLDALLSHCSTEEDVLDVSQLLNQLCIKFKENAAPAIDVALLPFLQKVLTMQLSETSVVPT--------------------------------------------------------ASCVAPPPHLVTEQLSIRKQAFATLQHIATHNASAVFFSERNVGSFGDILSLMNDGATTVPDPVMKKTCVVYMSELV 1080
BLAST of mRNA_Ecto-sp8_S_contig10498.781.1 vs. uniprot
Match: A0A7S2DK11_9STRA (Exportin-T n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DK11_9STRA) HSP 1 Score: 184 bits (466), Expect = 1.870e-45 Identity = 161/583 (27.62%), Postives = 252/583 (43.22%), Query Frame = 1
Query: 31 VGRLFRAMDHLPQLLATLYQRMKYPPDFAFDPSDEDEG----EEDMLRQQLRKHLVNAIRNAPETVLEFICRALSSLPTPLSGLPFPDLEAALRLIFHFGEGCGGVSVLNSSXXXXXXXXXXXRPASPGAAELLRSGAFPQMVLALHDSDVARHKHPQVVMLYFQLTVRYSKMLADGPPHLIPKVLEAICGPQGLSNADVTLRTRSCYFLTKLVKAMKEGVVPYVDVIVPGVQALL---DSPQGNPMDLSDEAKL--------NLISRHAAFACVTTSPFPPSRFKEESRLIPSGS-----NTSKSLQAAREILLLLAHTVRRTHTCTLTSHLSPSRFFFLFFFQALEAATSALMSFPRHVALRAKTMFLVHGLIPCLGEGLLRALPLAALLVLVQE--------GDGKDLMEVAQVLNQLTIEYGPKSAQLLDGALMPFIRRTYQLTPGAGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAVGAEAQQLLAHEVAERAGFQKLCFSVIQHVSSNGLAGVLSSPTNAPHLDGMLRSVVDGLSGAEDASTKKTCL 1695
+G F A+ +P+LL+ +YQ++ Y +P ++E EE++ R ++R+ + IR PE LEF+C LS L PLS L +P EAALRL++HFGEG G P L +SGAFP ++ A+H SD+ H H V LY +L+VRY K L +G P L+ VL+ +C L++ TLR R C+ L +VK + V P+ V++ GV+ +L DSP G+ SD L N +R F + LI +T + + + L T+ ++ + TSHLS + + L+ + AL + H +R+K M ++H ++ CL LL L + +LV D+ ++ ++NQL I+Y + +L+ LM + R P + QQ H+ + R Q+ F V+QHV+++GL+ VL PTN PHL+ +L +VV G+ +D KKTC+
Sbjct: 99 IGHHFVALSEIPKLLSVIYQQLHYSESSNSEPDGDEEALEEAEEEVHRGRIRRLFLKCIRVVPELSLEFVCSMLSELQPPLSDLRWPRAEAALRLVYHFGEGLG-----------------------PKNQTLCQSGAFPTVLAAVHQSDIGMHPHWCVKTLYLELSVRYVKRL-EGQPELVRLVLDRMCS--SLTSPHHTLRARVCFLLKSMVKTLGADVTPFAVVVLNGVRQILFMVDSPLGD----SDRTHLFEIGALLINYATRVPEQQAAHLESFVRPLLNDVEALIGQAQLATHEDTRHFMGNSVALKLSYLATLSKSSSRD-TSHLS------VVYGTILQVSVKALTAMVTHPMVRSKFMVVLHRMVSCLDNALLLDLLPQPMELLVSHQPTVSSDMSTESDVEDLVAMVNQLMIKYHIRLGPVLEPLLMVLLSRLVDRMPSD---------------------------------------------------------------DKQQ--PHDRSIRLAMQRHYFLVLQHVAAHGLSPVLLGPTNRPHLETLLNTVVCGIRDVDDPMAKKTCI 579
BLAST of mRNA_Ecto-sp8_S_contig10498.781.1 vs. uniprot
Match: A0A7S2K9G5_9STRA (Exportin-T n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K9G5_9STRA) HSP 1 Score: 167 bits (422), Expect = 9.810e-41 Identity = 140/489 (28.63%), Postives = 212/489 (43.35%), Query Frame = 1
Query: 280 DLEAALRLIFHFGEGCGGVSVLNSSXXXXXXXXXXXRPASPGAAEL-LRSGAFPQMVLALHDSDVARHKHPQVVMLYFQLTVRYSKMLADGPPHLIPKVLEAICGPQGLSNADVTLRTRSCYFLTKLVKAMKEGVVPYVDVIVPGVQALLDSPQGNPMDLSD-------------EAKLNLISRHAAFACVTTSPFPPSRFKEESRLIPSGSNTSKSLQAAREILLLLAHTVRRTHTCTLTSHLSPSRFFFLFFFQALEAATSALMSFPRHVALRAKTMFLVHGLIPCLGEGLLRALPLAALLVLVQEGDGKDLMEVAQVLNQLTIEYGPKSAQLLDGALMPFIRRTYQLTPGAGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAVGAEAQQLLAHEVAERAGFQKLCFSVIQHVSSNGLAGVLSSPTNAPHLDGMLRSVVDGLSGAEDASTKKTCLYIF 1704
+LEAALRL+FH+ EG SP A L L +G F Q++ ALH SDVA H H +VV+LY+ + VRY+K+L + L+P +L A+ G QGL + +R+RSCY L +LVK M + P+V+ V G+Q LL + P+ D +A L+ + V T P R EE +I SG+ + + +A + + PS + SAL S P + +R KTM + +I CL ++ + + L +L+ D KD+++V Q+LNQL I++ +A +D ++MPF+R+ Y+L P A +E L H + E+ QKL F +QH+ + + VL SPTN P L+ +LR + +G + S KKTCL F
Sbjct: 5 ELEAALRLVFHYCEGL-----------------------SPAATSLALEAGPFRQVIEALHQSDVAYHPHREVVILYYDIVVRYAKVLKENQ-ELLPGILSAMSGTQGLQHPHPRVRSRSCYLLLRLVKEMGPILRPFVETAVGGIQGLLTNHTSLPLQPDDSLYLFETTGLLIGKAGLDESEQQRYLMAVIT---PHIRSIEE--IISSGNLSHDPDHYGGILANFIAAVAYMSKPIS-----KPSPEVKKILLGIIPVLLSALQSLPTNEHVRGKTMIALQRMIICLNVDIIPRMSVF-LELLISHCDTKDILDVTQLLNQLCIKFKSAAAPSIDSSVMPFLRKCYELIPRA--------------------------------------------------------------SEDGDLAPHLITEQLSIQKLIFIFLQHIVTRNVTSVLLSPTNGPQLEEILRVMKEGAVSIMEPSMKKTCLTFF 396
BLAST of mRNA_Ecto-sp8_S_contig10498.781.1 vs. uniprot
Match: A0A7S2DJX0_9STRA (Exportin-T (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DJX0_9STRA) HSP 1 Score: 160 bits (406), Expect = 1.750e-38 Identity = 132/449 (29.40%), Postives = 208/449 (46.33%), Query Frame = 1
Query: 31 VGRLFRAMDHLPQLLATLYQRMKYPPDFAFDPSDEDEG----EEDMLRQQLRKHLVNAIRNAPETVLEFICRALSSLPTPLSGLPFPDLEAALRLIFHFGEGCGGVSVLNSSXXXXXXXXXXXRPASPGAAELLRSGAFPQMVLALHDSDVARHKHPQVVMLYFQLTVRYSKMLADGPPHLIPKVLEAICGPQGLSNADVTLRTRSCYFLTKLVKAMKEGVVPYVDVIVPGVQALL---DSPQGNPMDLSDEAKL--------NLISRHAAFACVTTSPFPPSRFKEESRLIPSGS-----NTSKSLQAAREILLLLAHTVRRTHTCTLTSHLSPSRFFFLFFFQALEAATSALMSFPRHVALRAKTMFLVHGLIPCLGEGLLRALPLAALLVLVQE--------GDGKDLMEVAQVLNQLTIEYGPKSAQLLDGALMPFIRRTYQLTP 1293
+G F A+ +P+LL+ +YQ++ Y +P ++E EE++ R ++R+ + IR PE LEF+C LS L PLS L +P EAALRL++HFGEG G P L +SGAFP ++ A+H SD+ H H V LY +L+VRY K L +G P L+ VL+ +C L++ TLR R C+ L +VK + V P+ V++ GV+ +L DSP G+ SD L N +R F + LI +T + + + L T+ ++ + TSHLS + + L+ + AL + H +R+K M ++H ++ CL LL L + +LV D+ ++ ++NQL I+Y + +L+ LM + R P
Sbjct: 99 IGHHFVALSEIPKLLSVIYQQLHYSESSNSEPDGDEEALEEAEEEVHRGRIRRLFLKCIRVVPELSLEFVCSMLSELQPPLSDLRWPRAEAALRLVYHFGEGLG-----------------------PKNQTLCQSGAFPTVLAAVHQSDIGMHPHWCVKTLYLELSVRYVKRL-EGQPELVRLVLDRMCS--SLTSPHHTLRARVCFLLKSMVKTLGADVTPFAVVVLNGVRQILFMVDSPLGD----SDRTHLFEIGALLINYATRVPEQQAAHLESFVRPLLNDVEALIGQAQLATHEDTRHFMGNSVALKLSYLATLSKSSSRD-TSHLS------VVYGTILQVSVKALTAMVTHPMVRSKFMVVLHRMVSCLDNALLLDLLPQPMELLVSHQPTVSSDMSTESDVEDLVAMVNQLMIKYHIRLGPVLEPLLMVLLSRLVDRMP 510 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10498.781.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10498.781.1 >prot_Ecto-sp8_S_contig10498.781.1 ID=prot_Ecto-sp8_S_contig10498.781.1|Name=mRNA_Ecto-sp8_S_contig10498.781.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=745bp MNGGPGGGAEVGRLFRAMDHLPQLLATLYQRMKYPPDFAFDPSDEDEGEEback to top mRNA from alignment at Ecto-sp8_S_contig10498:56..6732- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10498.781.1 ID=mRNA_Ecto-sp8_S_contig10498.781.1|Name=mRNA_Ecto-sp8_S_contig10498.781.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=6677bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10498:56..6732- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10498:56..6732- >mRNA_Ecto-sp8_S_contig10498.781.1 ID=mRNA_Ecto-sp8_S_contig10498.781.1|Name=mRNA_Ecto-sp8_S_contig10498.781.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=2235bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10498:56..6732- (Ectocarpus species8 EcLAC_412)back to top |