mRNA_Ecto-sp8_S_contig10377.617.1 (mRNA) Ectocarpus species8 EcLAC_412
|
Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10377.617.1 vs. uniprot
Match: D7G654_ECTSI (UDP-glucose:glycoprotein glucosyltransferase, C-terminal, family GT24 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G654_ECTSI) HSP 1 Score: 616 bits (1589), Expect = 7.010e-209 Identity = 435/513 (84.80%), Postives = 441/513 (85.96%), Query Frame = 1
Query: 1 ISSGPALRPTESIHRIFVDWRASGPRWVHILGAELQSTVISQLASFLLRFHQASQGYLGFERRQMIPDAVALGEILVETVAEVAAARGXXXXXXXXXXXXXXXXXXXXXXXXX--VNGDGVVSVLRLGPDGHLRQASVGGAAAAAAGEKEP----DADGSGDAAASDAAGXXXXXXXXXXXXXXXXXXXXGDPAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGQVAVELVAVLDPLSVAAQRASTLLSLAQEVLGLPVTLLLLPSLDVSEVPLKNFYRLVLGPASGSVAAFDRLPTRDILTQRLDTPEPWNVQASAALQDLDNLRCDDSAGCGDNGTFTTSAEYTVKGLLLTGRCYDVTSSPPSPPQGLQLVLRPSPSTPSSHTXXXXXXXXXVTADTVVMENLGYFQLQASPGVWDLELADGRASEVYEIIDGGGRGGSGSGGVVNSAAHAAALEVQRRLERERAAEGASPAAESQAIVVRNFYSR 1521
+SSGPALRPTESIHR+ VDWRASGPRW HILGAELQSTVISQLASFLLRFHQ ERRQMIPDAVALGEILV+TVAEVAAAR XXXXXXXXXXXXXXXXXXXXXXXXX VN DGVVSVLRLGPDGHLR+ +VGGAA DADG GDAAA DA XXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXX MGQVAVELVAVLDPLSVAAQRASTLLSLAQEVLGLPVTLLLLPSLDVSE+PLKNFYRLVLGPASGSVAAFDRLP RDILTQRLDTPEPWNVQASAALQDLDNLRCDDSAGCGDNGTFTTSAEYTVKGLLLTGRCYDVTSSPPSPPQGLQLVLRPSPSTPSSHTXXXXXXXXXVTADTVVMENLGYFQLQASPGVWDLELADGRASEVYEIIDGGGRGGSGSGGVVNSAAHAAALEVQRRLE ERAAEGASPAAESQAIVVRNFYSR
Sbjct: 252 MSSGPALRPTESIHRVLVDWRASGPRWFHILGAELQSTVISQLASFLLRFHQ--------ERRQMIPDAVALGEILVQTVAEVAAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNDDGVVSVLRLGPDGHLRRGTVGGAAXXXXXXXXXXXXQDADGPGDAAAGDAVXXXXXXXXXXXXXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXANGAGDGQAAAEAEGAGGEGVVEEDEGGEELGMGQVAVELVAVLDPLSVAAQRASTLLSLAQEVLGLPVTLLLLPSLDVSELPLKNFYRLVLGPASGSVAAFDRLPARDILTQRLDTPEPWNVQASAALQDLDNLRCDDSAGCGDNGTFTTSAEYTVKGLLLTGRCYDVTSSPPSPPQGLQLVLRPSPSTPSSHTXXXXXXXXXVTADTVVMENLGYFQLQASPGVWDLELADGRASEVYEIIDGGGRGGSGSGGVVNSAAHAAALEVQRRLETERAAEGASPAAESQAIVVRNFYSR 752
BLAST of mRNA_Ecto-sp8_S_contig10377.617.1 vs. uniprot
Match: A0A6H5L0Y3_9PHAE (GT24 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Y3_9PHAE) HSP 1 Score: 528 bits (1361), Expect = 1.090e-174 Identity = 407/483 (84.27%), Postives = 419/483 (86.75%), Query Frame = 1
Query: 88 ILGAELQSTVISQLASFLLRFHQASQGYLGFERRQMIPDAVALGEILVETVAEVAAARGXXXXXXXXXXXXXXXXXXXXXXXXXVNGDGVVSVLRLGPDGHLRQASVGGAAAAAAGEKEPDADGSGDAAASDAAGXXXXXXXXXXXXXXXXXXXXGDPAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----MGQVAVELVAVLDPLSVAAQRASTLLSLAQEVLGLPVTLLLLPSLDVSEVPLKNFYRLVLGPASGSVAAFDRLPTRDILTQRLDTPEPWNVQASAALQDLDNLRCDDSAGCGDNGTFTTSAEYTVKGLLLTGRCYDVTSSPPSPPQGLQLVLRPSPSTPSSHTXXXXXXXXX-VTADTVVMENLGYFQLQASPGVWDLELADGRASEVYEIIDGGGRGGSGSGGVVNSAAHAAALEVQRRLERERAAEGASPAAESQAIVVRNFYS 1518
++GAELQSTVISQLASFLLRFHQAS+ ERRQMIPDAVAL EILVETVAEVAAAR XXXXXXXXXXXXXXXXXXXXXXXX V+GDGVVSVLRLGPDGHL + SVGGAAAAA E++ DA XXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX MGQVAVELVAVLDPLS+AAQRASTLLSLAQEVLGLPVTLLLLPSLDVSE+PLKNFYRLVLGPASGSVAAFDRLPTRDILTQRLDTPEPWNVQA AALQDLDNLRCDDSAGCGDNGTFTTSAEYTVKGLL+TGRCYDVTSSPPSPPQGLQLVLRPSPSTPSS T XXXXXXXX VTADTVVMENLGYFQLQASPGVWDLELADGRASEVYEIIDGGGRGGSGSGGVVNSAAHAAALEVQRRLERERAAEGASPA +SQAIVVR +S
Sbjct: 279 MVGAELQSTVISQLASFLLRFHQASEND---ERRQMIPDAVALAEILVETVAEVAAARXXXXXXXXXXXXXXXXXXXXXXXXX-VSGDGVVSVLRLGPDGHLHRGSVGGAAAAAV-EQDGDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAAAEAEGAEGEGVVEEDEGEEELGMGQVAVELVAVLDPLSLAAQRASTLLSLAQEVLGLPVTLLLLPSLDVSELPLKNFYRLVLGPASGSVAAFDRLPTRDILTQRLDTPEPWNVQAFAALQDLDNLRCDDSAGCGDNGTFTTSAEYTVKGLLVTGRCYDVTSSPPSPPQGLQLVLRPSPSTPSSQTNXXXXXXXXXVTADTVVMENLGYFQLQASPGVWDLELADGRASEVYEIIDGGGRGGSGSGGVVNSAAHAAALEVQRRLERERAAEGASPATDSQAIVVRTPFS 756
BLAST of mRNA_Ecto-sp8_S_contig10377.617.1 vs. uniprot
Match: A0A7S2S3P5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S3P5_9STRA) HSP 1 Score: 174 bits (442), Expect = 5.950e-44 Identity = 103/215 (47.91%), Postives = 137/215 (63.72%), Query Frame = 1
Query: 724 MGQVAVELVAVLDPLSVAAQRASTLLSLAQEVLGLPVTLLLLPSLDVSEVPLKNFYRLVLGPASGSVA---AFDRLPTRDILTQRLDTPEPWNVQASAALQDLDNLRCDDSAGCGDN-GTFTTSAEYTVKGLLLTGRCYDVTSSPPSPPQGLQLVLRPSPSTPSSHTXXXXXXXXXVTADTVVMENLGYFQLQASPGVWDLELADGRASEVYEII 1356
+G VAV LV LDPL+ AAQR + LL + ++ L +P+ LLLLP ++ SE PL+ FYR V+ VA F LP ILT R+D PEPWNVQ+S LQD+DNLRCDD CGD G+ T+ EY++K L++ G+CYDV PP GLQL L S + ++ +DT+VM+NLGYFQLQA PGVW + LA GR +++E++
Sbjct: 60 LGTVAVTLV--LDPLTEAAQRVAPLLLVLRDQLKVPLRLLLLPEMEYSEFPLQKFYRYVVTSDLSDVAPRAVFRDLPKHQILTMRMDVPEPWNVQSSWTLQDVDNLRCDDVI-CGDEPGSTVTTIEYSLKSLVVGGQCYDVVFH--HPPNGLQLSLLSSSTAANTDAI----------SDTLVMQNLGYFQLQAQPGVWQIALASGRGRDLFELL 259
BLAST of mRNA_Ecto-sp8_S_contig10377.617.1 vs. uniprot
Match: A0A7S2AIV0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AIV0_9STRA) HSP 1 Score: 173 bits (438), Expect = 1.510e-42 Identity = 100/212 (47.17%), Postives = 134/212 (63.21%), Query Frame = 1
Query: 736 AVELVAVLDPLSVAAQRASTLLSLAQEVLGLPVTLLLLPSLDVSEVPLKNFYRLVLGPASGSV---AAFDRLPTRDILTQRLDTPEPWNVQASAALQDLDNLRCDDSAGCGDN-GTFTTSAEYTVKGLLLTGRCYDVTSSPPSPPQGLQLVLRPSPSTPSSHTXXXXXXXXXVTADTVVMENLGYFQLQASPGVWDLELADGRASEVYEIID 1359
+V + AVLDPL+ AAQRA+ LL + ++ L +P+ L L P + +SE PL+ FYR V+G V A F+ LP ILT R+DTPEPWNVQ++ +QD+DNLRCDD CGD G+ ++ EYT+K LL+ G+C+D PP GLQ+ L + H+ DTVVM+NLGYFQL A PGVW L LA GRAS+++ + D
Sbjct: 1047 SVVVTAVLDPLTEAAQRAAPLLMVLRDQLQVPIRLFLTPEIHMSEFPLQKFYRYVVGADVEDVTPRAIFEDLPRSHILTMRMDTPEPWNVQSAMTVQDVDNLRCDDVT-CGDEAGSSVSTIEYTLKSLLVGGQCFDTNDH--RPPNGLQIKLSRRGDEGAPHS------------DTVVMQNLGYFQLAAFPGVWRLNLAAGRASDLFSLED 1243
BLAST of mRNA_Ecto-sp8_S_contig10377.617.1 vs. uniprot
Match: A0A835Z7N5_9STRA (Nucleotide-diphospho-sugar transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7N5_9STRA) HSP 1 Score: 168 bits (426), Expect = 8.030e-42 Identity = 108/226 (47.79%), Postives = 137/226 (60.62%), Query Frame = 1
Query: 739 VELVAVLDPLSVAAQRASTLLSLAQEVLGLPVTLLLLPSLDVSEVPLKNFYRLVLG-----PASGSVAAFDRLPTRDILTQRLDTPEPWNVQ--ASAALQDLDNLRCDD-SAGCGDNGTFTTSAEYTVKGLLLTGRCYDVT-----------SSPPSPPQGLQLVLRPSPSTPSSHTXXXXXXXXXVTADTVVMENLGYFQLQASPGVWDLELADGRAS-EVYEII 1356
+ +VA+LDPLS+AAQRASTLL +A +G+ VTL+LLP+L+ S++PLK+FYRL LG AAF RLP R ILTQR+D P WNVQ ASA QDLDNLRC+D +A CGD GT T A Y ++ LL++G C + + P GLQLVLR +DTV M N GYFQL+A+PGVW L LA G +S + YE++
Sbjct: 1 MRVVALLDPLSIAAQRASTLLRIATHTIGVRVTLVLLPALEPSDLPLKSFYRLALGGXXXXXXXXXTAAFTRLPRRHILTQRVDAPPAWNVQRAASATRQDLDNLRCEDGTATCGDGGTDVTHARYALQHLLVSGLCREAAPEAEAAAAAPAAGDTEPVGGLQLVLR------------REGNDGGAASDTVSMNN-GYFQLKAAPGVWRLALARGTSSAQQYELL 213
BLAST of mRNA_Ecto-sp8_S_contig10377.617.1 vs. uniprot
Match: A0A2D4CJC7_PYTIN (UDP-glucose:glycoprotein glucosyltransferase, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CJC7_PYTIN) HSP 1 Score: 161 bits (408), Expect = 6.850e-39 Identity = 95/213 (44.60%), Postives = 127/213 (59.62%), Query Frame = 1
Query: 727 GQVAVELVAVLDPLSVAAQRASTLLSLAQEVLGLPVTLLLLPSLDVSEVPLKNFYRLVLGPASGSVA--AFDRLPTRDILTQRLDTPEPWNVQASAALQDLDNLRCDDSAGCGDNGTFTTSAEYTVKGLLLTGRCYDVTSSPPSPPQGLQLVLRPSPSTPSSHTXXXXXXXXXVTADTVVMENLGYFQLQASPGVWDLELADGRASEVYEIID 1359
G ++ + A +DPLS AAQR S+L+ + L V L+L+PS+D SE PL+ FYR + S + +F +LP + ILT ++DTPE WNVQ + +DLDNLR D + T S + ++ LL+ G+C D T SPP GLQLVL + H DT+VM+NLGYFQLQA+PGVWDL LA GRA E+YEI+D
Sbjct: 256 GDQSLRVTAYVDPLSEAAQRMSSLIEMLHSHLNASVELMLVPSVDYSEFPLQRFYRFLFDKKSPTATKVSFRKLPIKPILTMKIDTPEAWNVQIHRSTEDLDNLRVDPDSPSDVRAVKTAS--FRLENLLVYGQCRDKTFEMYSPPNGLQLVLERDVGSVRLHR------------DTLVMKNLGYFQLQATPGVWDLHLARGRAVELYEILD 454
BLAST of mRNA_Ecto-sp8_S_contig10377.617.1 vs. uniprot
Match: A0A6A5A0B2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5A0B2_9STRA) HSP 1 Score: 157 bits (397), Expect = 3.100e-38 Identity = 94/211 (44.55%), Postives = 126/211 (59.72%), Query Frame = 1
Query: 727 GQVAVELVAVLDPLSVAAQRASTLLSLAQEVLGLPVTLLLLPSLDVSEVPLKNFYRLVLGPASGSVAAFDRLPTRDILTQRLDTPEPWNVQASAALQDLDNLRCDDSAGCGDNGTFTTSAEYTVKGLLLTGRCYDVTSSP-PSPPQGLQLVLRPSPSTPSSHTXXXXXXXXXVTADTVVMENLGYFQLQASPGVWDLELADGRASEVYEII 1356
G ++++VA LDPLS AQRAS +L + VL +TL+L+P E PLK FYR + G S S+ FDRLP +LT ++TPE WNVQ + D+DN++ + SA +T+K +L+ G+C D T++ P+ P GLQLVL S + SH DTVVM+NLGYFQLQA+PGVW L LA GR S +YE+I
Sbjct: 345 GSSSLDVVAYLDPLSDTAQRASGILRMLHSVLHAKITLVLVPPPSYDEFPLKRFYRFLWGGTSSSLVEFDRLPRHPVLTLNIETPELWNVQMVQSDVDIDNIQQN------------ASATFTIKDVLVYGQCVDKTNAQYPTLPNGLQLVLERSVAKLHSHK------------DTVVMKNLGYFQLQAAPGVWQLGLAKGRHSTIYELI 531
BLAST of mRNA_Ecto-sp8_S_contig10377.617.1 vs. uniprot
Match: A0A485L3Y4_9STRA (Aste57867_15229 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L3Y4_9STRA) HSP 1 Score: 160 bits (404), Expect = 3.580e-38 Identity = 104/240 (43.33%), Postives = 137/240 (57.08%), Query Frame = 1
Query: 736 AVELVAVLDPLSVAAQRASTLLSLAQEVLGLPVTLLLLPSLDVSEVPLKNFYRLVLGPASGSVAAFDRLPTRDILTQRLDTPEPWNVQASAALQDLDNLRCDDSAGCGDNGTFTTSAEYTVKGLLLTGRCYDVTSSP-PSPPQGLQLVLRPSPSTPSSHTXXXXXXXXXVTADTVVMENLGYFQLQASPGVWDLELADGRASEVYEIIDGGGRGGSGSGGVVNSAAHAAALEVQRRLERE 1452
A+++VA LDPLS AQRAS +L + + LG +TL+LL + E PLK FYR + G S S F RLP + +LT L+TPE WNVQ + D+DN++ SA Y +K +L+ G+C D T+ PS P GLQLVL + T S H DTVVM+NLGYFQLQA+PGVW L LA GR S +YE+ID R S V + + LEV++R+ +E
Sbjct: 978 AIDIVAYLDPLSETAQRASGILRMLESTLGAKITLVLLAAPSYDEFPLKRFYRFLWGSHSASQVEFQRLPRQPVLTMNLETPELWNVQMIRSDTDVDNIQ------------HNASATYYIKDVLVYGQCMDRTTPHYPSLPNGLQLVLERTAGTLSVHK------------DTVVMKNLGYFQLQAAPGVWQLGLAKGRHSTIYEMIDEEERVNSVRVVVYDFMSSIMQLEVKKRVGQE 1193
BLAST of mRNA_Ecto-sp8_S_contig10377.617.1 vs. uniprot
Match: A0A6G0WTR9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WTR9_9STRA) HSP 1 Score: 158 bits (399), Expect = 1.660e-37 Identity = 106/258 (41.09%), Postives = 146/258 (56.59%), Query Frame = 1
Query: 733 VAVELVAVLDPLSVAAQRASTLLSLAQEVLGLPVTLLLLPSLDVSEVPLKNFYRLVLGPASGSVAAFDRLPTRDILTQRLDTPEPWNVQASAALQDLDNLRCDDSAGCGDNGTFTTSAEYTVKGLLLTGRCYDVTSSP-PSPPQGLQLVLRPSPSTPSSHTXXXXXXXXXVTADTVVMENLGYFQLQASPGVWDLELADGRASEVYEIIDGGGRGGSGSGGVVNSAAHAAALEVQRRLERERAA---EGASPAAESQA 1494
V +++VA LDPLS AQRAS +L + + VLG +TL+LLPS D E PLK FYR + G + F+ LP + +LT L+TPE WNVQ + D+DN++ + SA Y +K +L+ G+C D T PS P GLQLVL + +T H DTVVM+NLGYFQLQA+PGVW L +A GR + +YE++ R S V + + LEV++R+ +E A + ASP E +A
Sbjct: 971 VIMDIVAYLDPLSETAQRASGILRMLESVLGAKITLVLLPSHDYEEFPLKRFYRFLWGKGATQTIHFNNLPRQPVLTMNLETPESWNVQMIKSDTDVDNIQRN------------ASATYYIKDVLVYGQCMDRTMPHYPSLPNGLQLVLERTAATQHFHK------------DTVVMKNLGYFQLQAAPGVWQLHVAKGRHASIYELMLKDSRVESVPVVVYDFLSSIMQLEVKKRVGQESAHLLDDSASPQDEEEA 1204
BLAST of mRNA_Ecto-sp8_S_contig10377.617.1 vs. uniprot
Match: W2R1X6_PHYPN (Uncharacterized protein n=27 Tax=Phytophthora TaxID=4783 RepID=W2R1X6_PHYPN) HSP 1 Score: 158 bits (399), Expect = 1.710e-37 Identity = 95/214 (44.39%), Postives = 127/214 (59.35%), Query Frame = 1
Query: 727 GQVAVELVAVLDPLSVAAQRASTLLSLAQEVLGLPVTLLLLPSLDVSEVPLKNFYRLVLGPASGSVAA---FDRLPTRDILTQRLDTPEPWNVQASAALQDLDNLRCDDSAGCGDNGTFTTSAEYTVKGLLLTGRCYDVTSSPPSPPQGLQLVLRPSPSTPSSHTXXXXXXXXXVTADTVVMENLGYFQLQASPGVWDLELADGRASEVYEIID 1359
G ++++ A +DPLS +AQ S+LL + L + L+LLP+ + +E PL+ FYR + S A F +LP + ILT ++DTPE WNVQA A DLDNLR D + T TSA + ++ LL+ G+C D T + SPP GLQLVL H DT+VM+NLGYFQLQA+PGVW L LA GRA+E+Y+IID
Sbjct: 1070 GDPSLQVAAYVDPLSESAQVMSSLLRMLHSQLNATIELVLLPADEYTEFPLQRFYRYLFDKKSSLAATSVEFRKLPVQPILTMKIDTPEAWNVQAFHAGDDLDNLRVDPDSPAAAKST--TSAVFQLESLLVYGQCRDTTFNMYSPPNGLQLVLEREVGAQLLHR------------DTLVMKNLGYFQLQATPGVWSLHLARGRAAELYDIID 1269 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10377.617.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10377.617.1 >prot_Ecto-sp8_S_contig10377.617.1 ID=prot_Ecto-sp8_S_contig10377.617.1|Name=mRNA_Ecto-sp8_S_contig10377.617.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=508bp ISSGPALRPTESIHRIFVDWRASGPRWVHILGAELQSTVISQLASFLLRFback to top mRNA from alignment at Ecto-sp8_S_contig10377:935..6743+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10377.617.1 ID=mRNA_Ecto-sp8_S_contig10377.617.1|Name=mRNA_Ecto-sp8_S_contig10377.617.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=5809bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10377:935..6743+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10377:935..6743+ >mRNA_Ecto-sp8_S_contig10377.617.1 ID=mRNA_Ecto-sp8_S_contig10377.617.1|Name=mRNA_Ecto-sp8_S_contig10377.617.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1524bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10377:935..6743+ (Ectocarpus species8 EcLAC_412)back to top |